
CmoCh06G008160 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATCCTCTTCAGAGATTCCAGTTTCAGTCGTCGTCGTCGGACATGAAAGAAAAGAACTCGAAGAAGATGAAGCTCGGGAACGACGGCAAGCATCCGACATATCGCGGCGTCCGAATGCGGCAATGGGGAAAATGGGTATCAGAAATCAGAGAACCCAAGAAGAAATCCAGAATTTGGTTGGGTACATTTTCCACTCCAGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACCATCAAAGGTCACTCCGCTTACCTCAACTTCCCGGAGTTGGCTCACCGCTTCCCTCGTCCCGCTAGCTCCTCCGCTAAGGACATTCGAGCCGCCGCCGCCAAAGCCGCGACGTTTCCTATTAATTCCACTGATGAAGACGACGACGATGCCGCCTCTCAATCCGACCGCAACCGCTCTCCCTCCTCTGTCGCCGCCGCCGCGAAATCTCCTGGCGAAATCGATGATCCGTTCTTCGATCTTCCCGATCTGTTTCTTCATCCCAATCACCAAATTGGTACATTCTGTTTCTCTCAAATGCTTCCGATTGACGGCTTCGACTCTGCTTTCGGCCGCCCGCCGTCGCCGTCGGAATATTTCGCCGCCACTCCTCCTTGA ATGGAAGATCCTCTTCAGAGATTCCAGTTTCAGTCGTCGTCGTCGGACATGAAAGAAAAGAACTCGAAGAAGATGAAGCTCGGGAACGACGGCAAGCATCCGACATATCGCGGCGTCCGAATGCGGCAATGGGGAAAATGGGTATCAGAAATCAGAGAACCCAAGAAGAAATCCAGAATTTGGTTGGGTACATTTTCCACTCCAGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACCATCAAAGGTCACTCCGCTTACCTCAACTTCCCGGAGTTGGCTCACCGCTTCCCTCGTCCCGCTAGCTCCTCCGCTAAGGACATTCGAGCCGCCGCCGCCAAAGCCGCGACGTTTCCTATTAATTCCACTGATGAAGACGACGACGATGCCGCCTCTCAATCCGACCGCAACCGCTCTCCCTCCTCTGTCGCCGCCGCCGCGAAATCTCCTGGCGAAATCGATGATCCGTTCTTCGATCTTCCCGATCTGTTTCTTCATCCCAATCACCAAATTGGTACATTCTGTTTCTCTCAAATGCTTCCGATTGACGGCTTCGACTCTGCTTTCGGCCGCCCGCCGTCGCCGTCGGAATATTTCGCCGCCACTCCTCCTTGA ATGGAAGATCCTCTTCAGAGATTCCAGTTTCAGTCGTCGTCGTCGGACATGAAAGAAAAGAACTCGAAGAAGATGAAGCTCGGGAACGACGGCAAGCATCCGACATATCGCGGCGTCCGAATGCGGCAATGGGGAAAATGGGTATCAGAAATCAGAGAACCCAAGAAGAAATCCAGAATTTGGTTGGGTACATTTTCCACTCCAGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACCATCAAAGGTCACTCCGCTTACCTCAACTTCCCGGAGTTGGCTCACCGCTTCCCTCGTCCCGCTAGCTCCTCCGCTAAGGACATTCGAGCCGCCGCCGCCAAAGCCGCGACGTTTCCTATTAATTCCACTGATGAAGACGACGACGATGCCGCCTCTCAATCCGACCGCAACCGCTCTCCCTCCTCTGTCGCCGCCGCCGCGAAATCTCCTGGCGAAATCGATGATCCGTTCTTCGATCTTCCCGATCTGTTTCTTCATCCCAATCACCAAATTGGTACATTCTGTTTCTCTCAAATGCTTCCGATTGACGGCTTCGACTCTGCTTTCGGCCGCCCGCCGTCGCCGTCGGAATATTTCGCCGCCACTCCTCCTTGA MEDPLQRFQFQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKAATFPINSTDEDDDDAASQSDRNRSPSSVAAAAKSPGEIDDPFFDLPDLFLHPNHQIGTFCFSQMLPIDGFDSAFGRPPSPSEYFAATPP Homology
BLAST of CmoCh06G008160 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.9e-39 Identity = 101/184 (54.89%), Postives = 114/184 (61.96%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.9e-36 Identity = 90/173 (52.02%), Postives = 105/173 (60.69%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.4e-33 Identity = 87/156 (55.77%), Postives = 100/156 (64.10%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2) HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32 Identity = 85/206 (41.26%), Postives = 108/206 (52.43%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.8e-32 Identity = 81/160 (50.62%), Postives = 103/160 (64.38%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy TrEMBL
Match: A0A6J1FZQ3 (ethylene-responsive transcription factor ERF038-like OS=Cucurbita moschata OX=3662 GN=LOC111449391 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 2.9e-111 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy TrEMBL
Match: A0A6J1L2H3 (ethylene-responsive transcription factor ERF038-like OS=Cucurbita maxima OX=3661 GN=LOC111498502 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 5.2e-108 Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy TrEMBL
Match: A0A6J1E6G7 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita moschata OX=3662 GN=LOC111431149 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76 Identity = 162/214 (75.70%), Postives = 171/214 (79.91%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy TrEMBL
Match: A0A6J1HN35 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111465108 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 3.4e-75 Identity = 162/225 (72.00%), Postives = 171/225 (76.00%), Query Frame = 0
BLAST of CmoCh06G008160 vs. ExPASy TrEMBL
Match: A0A5A7TD44 (Ethylene-responsive transcription factor ERF039 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00450 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 3.2e-73 Identity = 158/212 (74.53%), Postives = 168/212 (79.25%), Query Frame = 0
BLAST of CmoCh06G008160 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 ) HSP 1 Score: 163.3 bits (412), Expect = 2.0e-40 Identity = 101/184 (54.89%), Postives = 114/184 (61.96%), Query Frame = 0
BLAST of CmoCh06G008160 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 152.9 bits (385), Expect = 2.8e-37 Identity = 90/173 (52.02%), Postives = 105/173 (60.69%), Query Frame = 0
BLAST of CmoCh06G008160 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34 Identity = 87/156 (55.77%), Postives = 100/156 (64.10%), Query Frame = 0
BLAST of CmoCh06G008160 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 140.2 bits (352), Expect = 1.9e-33 Identity = 85/206 (41.26%), Postives = 108/206 (52.43%), Query Frame = 0
BLAST of CmoCh06G008160 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 139.0 bits (349), Expect = 4.1e-33 Identity = 81/160 (50.62%), Postives = 103/160 (64.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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