CmoCh06G006490 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G006490
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	PLATZ transcription factor family protein
Location	Cmo_Chr06: 3267431 .. 3269752 (+)
RNA-Seq Expression	CmoCh06G006490
Synteny	CmoCh06G006490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAGGTCCCTTGAACCCAACGCAGACCTTCTCAGGTTCGGCTTCGGAGCTTGCTTCGGTGTTTGCTTGAAGCTTGGGGGAAGATAAGAACGACCCCTTTCTCTCTCTAGTTTCTCTCTCTAACGCCATCTACCACTCTCTACAAGAACCCATTCTCTCCCTCACCGCCTCCACTCTTCTAAAAGCTAAATCCCTCTCTCTCCTCTTTTTCTCTCTCTAAAACCAGGCTTAAACTCTCTGTTTATCTCTGATTTTGGTTTTGGATTGCTGTGGTTTAGACTGGGTTTTCGTTCTTTTTTGATTAATTTCAAACTGGCGATCGAAAATCACGAGACGACTGTTCGTGAAATCAAGCCCAAGAACAGAAGAATCATGGTATTAAGCTTCTTGTTCTTCATTTTAATTTCCTGCATTCTGTTCTTTGCTCATCTGGGTTTTGATTCTTGCTCTGTTTTCTCTTCTGGGTTTGCCTTCTTTTTGGATTTCTCCATATGGGGATGGATGCCTTGTTCTTCGATGTTCTTATCTGGGTTTTGATTTTCTAGTTTCACTTTCCCGCATTCAGTTTTTTCTCATCTGGGTTTTGCTTTTCAATCGATTTTTCCATCTGGGTTTTGGTTTTCCTCTGTTTTTTCTTCTTATTATGTCTGTTCTTCGTTATTTCCATCTCGGTTTTCATTATTTTCCGATTCTTTCATTAGGGTATTGCTTTTTTCCCCATTTGGGTAATGATTTTTGTTCGTTTTCCCATTAGGGTTATGATTCTTTTTCGATTTTCTCATCTGGGTCTTTCTTATTTTTTGATTTCCTCTCCTCTCCTCTCTGTTCTTGACATTGTTCTTGATGGATTTGATATCAACAGGGTGCTGGAGGCCCCGACGTTGAAGACAACCGCTGGCCGCCATGGCTAAAACCCCTTTTAAGAGAGAGCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCTTGAACCATCACAAGGATCATCGCGCTATACAGGTATCTCAAAATCGATATCCATTTCTCAAAACCTAACTCCAAAACCCCCAAAATCGATATCCATTTAGTCTTCTAATCGATTATGGGTTGATTTTCATTACAGATTCGAAGATCTTCGTACCACGATGTTATCAGAGTTTCTGAGATTCAAAAGGTTCTTGACATTTCTGGCGTTCAAACTTACATTATCAATAGCGCTAGAGTTGTGTTCTTGAATGAACGACCTCAGCCGCGGCCTGGTAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGTAGCCTGCTTGATTCGTTTCGATTCTGCTCTCTTGGTTGTAAGGTATTTGCTGCGTTGTTTTCTCTTGAAATTTTCCGTTTGGTTTCCGGGAAAATTGGTGAGAAAATTGGTGGGAAAATGGAGCAAAACCCAAATGGGAATCCGTGTCATCAATGTGTGTTAATTGGTTGAATTCAAACCAGTGGAGAGTCGACTTTTTCTTCCACTTGCTTAATTTTCTCGCCAACCAAACAAGTCACAAACGTTGAAAAAGAGTTAACCTAATTTTCGATTGGTTGTGTTCGTTCTCGTAGATCGTAGGCACGTCAAGGAGCTCCCAAAAGAAGAGGGTGACGATAACGGCTGCAGCCTCGGACTCGGAGGAATCCTACAGTAGCAGCAACCATAGGCAGAGCAACAGCAGCAACAACAGCAACAACAATGATATCAATAGGGTTCAGAGTTTTAGTCCATCGACGCCGCCTCCAACATCAGTGAATTATAGAACTGCGAAGCGGAGGAAGGGGATTCCACATCGAGCTCCGATGGGAAGTCTTATTATACAATATTAGTATTATATTTACTCTTTAATTATCATAAAAGCCTCGTGAAATGTAATGTAATGTAATTTCCACGATGATCTTTGCCTCCAACGCCTCGAGCCTTTGTGAAAGAGGCCAGTGTTAGGAGGCTTTACCTTCTAGCTTTGTAAATACAAGCATAGATGTGGGGGAAAAAGAAAATAATGTAAGGCAAATGTGTAAAATGGTGAAGGTTAGAGGACTAAAAGGAAAAATAAGTGGGTAGGTTTGAGTAATTATATAAATTAGGTTGGACTAATCGTCAATTATACTAAGTTTTGGGTCTTAGTTGTAAATAATGTGTGGGTTTTTTTTTTTTTTTTTAATTGCACTGAAAATACAATGTAATCCTTGGAATAATGAAATTTAGGAATGATGTTTATATGTGTCTATTAAAATAAAATATATTATATTATTCTAA

mRNA sequence

ATGAGTAAGGGTGCTGGAGGCCCCGACGTTGAAGACAACCGCTGGCCGCCATGGCTAAAACCCCTTTTAAGAGAGAGCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCTTGAACCATCACAAGGATCATCGCGCTATACAGATTCGAAGATCTTCGTACCACGATGTTATCAGAGTTTCTGAGATTCAAAAGGTTCTTGACATTTCTGGCGTTCAAACTTACATTATCAATAGCGCTAGAGTTGTGTTCTTGAATGAACGACCTCAGCCGCGGCCTGGTAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGTAGCCTGCTTGATTCGTTTCGATTCTGCTCTCTTGGTTGTAAGATCGTAGGCACGTCAAGGAGCTCCCAAAAGAAGAGGGTGACGATAACGGCTGCAGCCTCGGACTCGGAGGAATCCTACAGTAGCAGCAACCATAGGCAGAGCAACAGCAGCAACAACAGCAACAACAATGATATCAATAGGGTTCAGAGTTTTAGTCCATCGACGCCGCCTCCAACATCAGTGAATTATAGAACTGCGAAGCGGAGGAAGGGGATTCCACATCGAGCTCCGATGGGAAGTCTTATTATACAATATTAGTATTATATTTACTCTTTAATTATCATAAAAGCCTCGTGAAATGTAATGTAATGTAATTTCCACGATGATCTTTGCCTCCAACGCCTCGAGCCTTTGTGAAAGAGGCCAGTGTTAGGAGGCTTTACCTTCTAGCTTTGTAAATACAAGCATAGATGTGGGGGAAAAAGAAAATAATGTAAGGCAAATGTGTAAAATGGTGAAGGTTAGAGGACTAAAAGGAAAAATAAGTGGGTAGGTTTGAGTAATTATATAAATTAGGTTGGACTAATCGTCAATTATACTAAGTTTTGGGTCTTAGTTGTAAATAATGTGTGGGTTTTTTTTTTTTTTTTTAATTGCACTGAAAATACAATGTAATCCTTGGAATAATGAAATTTAGGAATGATGTTTATATGTGTCTATTAAAATAAAATATATTATATTATTCTAA

Coding sequence (CDS)

ATGAGTAAGGGTGCTGGAGGCCCCGACGTTGAAGACAACCGCTGGCCGCCATGGCTAAAACCCCTTTTAAGAGAGAGCTTCTTCGTTCAATGCAAACACCACATCGATTCCCACAAAAGCGAATGCAATATGTACTGTTTAGATTGTATGAACGGCGCTCTCTGTTCTCTTTGCTTGAACCATCACAAGGATCATCGCGCTATACAGATTCGAAGATCTTCGTACCACGATGTTATCAGAGTTTCTGAGATTCAAAAGGTTCTTGACATTTCTGGCGTTCAAACTTACATTATCAATAGCGCTAGAGTTGTGTTCTTGAATGAACGACCTCAGCCGCGGCCTGGTAAAGGCGTTACGAACACTTGTGAAGTCTGTGAACGTAGCCTGCTTGATTCGTTTCGATTCTGCTCTCTTGGTTGTAAGATCGTAGGCACGTCAAGGAGCTCCCAAAAGAAGAGGGTGACGATAACGGCTGCAGCCTCGGACTCGGAGGAATCCTACAGTAGCAGCAACCATAGGCAGAGCAACAGCAGCAACAACAGCAACAACAATGATATCAATAGGGTTCAGAGTTTTAGTCCATCGACGCCGCCTCCAACATCAGTGAATTATAGAACTGCGAAGCGGAGGAAGGGGATTCCACATCGAGCTCCGATGGGAAGTCTTATTATACAATATTAG

Protein sequence

MSKGAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY

Homology

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BLAST of CmoCh06G006490 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 16  PPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDHRAIQIRRSSY 75
           P WL  L  E FFV C +H  + K+E N+ CLDC   +LC  C+  H+ HR +Q+RR  Y
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPSHRFHRLLQVRRYVY 65

Query: 76  HDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRF 135
           HDV+R+ ++QK++D S VQ Y INSA+VVF+ +RPQ R  KG  N C  C+RSL + +  
Sbjct: 66  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYIH 125

Query: 136 CSLGCKI 143
           CSLGCK+
Sbjct: 126 CSLGCKV 131

[Close]

BLAST of CmoCh06G006490 vs. ExPASy TrEMBL
Match: A0A6J1ECV3 (uncharacterized protein LOC111431990 OS=Cucurbita moschata OX=3662 GN=LOC111431990 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 9.7e-124
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 4   GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK 63
           GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK
Sbjct: 2   GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK 61

Query: 64  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 123
           DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE
Sbjct: 62  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 121

Query: 124 VCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSNN 183
           VCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSNN
Sbjct: 122 VCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSNN 181

Query: 184 NDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 227
           NDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY
Sbjct: 182 NDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 224

[Close]

BLAST of CmoCh06G006490 vs. ExPASy TrEMBL
Match: A0A6J1L2M6 (uncharacterized protein LOC111498542 OS=Cucurbita maxima OX=3661 GN=LOC111498542 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120
Identity = 218/223 (97.76%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 4   GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK 63
           GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK
Sbjct: 2   GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK 61

Query: 64  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 123
           DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE
Sbjct: 62  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 121

Query: 124 VCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSNN 183
           VCERSLLDSFRFCSLGCKIVGTSRSSQKKR  I AAASDSEESYSSSNHR+SNS+NNSNN
Sbjct: 122 VCERSLLDSFRFCSLGCKIVGTSRSSQKKRGHIMAAASDSEESYSSSNHRRSNSNNNSNN 181

Query: 184 NDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 227
           NDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY
Sbjct: 182 NDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 224

[Close]

BLAST of CmoCh06G006490 vs. ExPASy TrEMBL
Match: A0A6J1CW01 (uncharacterized protein LOC111014906 OS=Momordica charantia OX=3673 GN=LOC111014906 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 201/225 (89.33%), Postives = 208/225 (92.44%), Query Frame = 0


Query: 4   GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK 63
           GAGGPD EDNRWPPWLKPLLRESFFVQCK HIDSHKSECNMYCLDCMNGALCSLCL +HK
Sbjct: 2   GAGGPDDEDNRWPPWLKPLLRESFFVQCKLHIDSHKSECNMYCLDCMNGALCSLCLAYHK 61

Query: 64  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 123
           DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE
Sbjct: 62  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 121

Query: 124 VCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITA--AASDSEESYSSSNHRQSNSSNNS 183
           VCERSLLDSFRFCSLGCKIVGTSR   KKRV   A  AASDSE SYSSSNHR+SNS+NNS
Sbjct: 122 VCERSLLDSFRFCSLGCKIVGTSRGFPKKRVAAVAAMAASDSEGSYSSSNHRRSNSNNNS 181

Query: 184 NNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 227
           N+   N+V SFSPSTPPPTSVNYRTAKRRKGIPHRAPMG L+I+Y
Sbjct: 182 NS---NKVHSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 223

[Close]

BLAST of CmoCh06G006490 vs. ExPASy TrEMBL
Match: A0A6J1HQK4 (uncharacterized protein LOC111465191 OS=Cucurbita maxima OX=3661 GN=LOC111465191 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.7e-107
Identity = 199/232 (85.78%), Postives = 210/232 (90.52%), Query Frame = 0


Query: 4   GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK 63
           GAGGPD EDNRWPPWLKPLLRE+FFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLN HK
Sbjct: 2   GAGGPDDEDNRWPPWLKPLLRETFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHK 61

Query: 64  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 123
           DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE
Sbjct: 62  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 121

Query: 124 VCERSLLDSFRFCSLGCKIVGTSRSSQKKR------VTITAAASDSEESYSSSNHRQS-- 183
           VCERSLLDSFRFCSLGCKIVGTSR+ QKKR      V  T A SDSE+SYSSSNHR+S  
Sbjct: 122 VCERSLLDSFRFCSLGCKIVGTSRNFQKKRVAGEAGVAATMAVSDSEDSYSSSNHRRSKS 181

Query: 184 -NSSNNSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 227
            NS N+ N++  N+ QSFSPSTPPPTSVNYRTAKRRKGIPHRAPMG L+++Y
Sbjct: 182 NNSHNSHNSHSSNKFQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLEY 233

[Close]

BLAST of CmoCh06G006490 vs. ExPASy TrEMBL
Match: A0A1S3CNY3 (uncharacterized protein LOC103503124 OS=Cucumis melo OX=3656 GN=LOC103503124 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107
Identity = 198/220 (90.00%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 7   GPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDHR 66
           GPD EDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLN HKDHR
Sbjct: 2   GPDDEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNFHKDHR 61

Query: 67  AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 126
           AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE
Sbjct: 62  AIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 121

Query: 127 RSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSNNNDI 186
           RSLLDSFRFCSLGCKIVGTSRS QKKRV +  AASDSE+SYSSS++ + + SNNSNNN  
Sbjct: 122 RSLLDSFRFCSLGCKIVGTSRSFQKKRVAM--AASDSEDSYSSSSNHKRSKSNNSNNNS- 181

Query: 187 NRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 227
           N+VQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMG L+++Y
Sbjct: 182 NKVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLEY 218

[Close]

BLAST of CmoCh06G006490 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 305.1 bits (780), Expect = 4.8e-83
Identity = 154/219 (70.32%), Postives = 170/219 (77.63%), Query Frame = 0


Query: 4   GAGGPDVEDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHK 63
           GAGGP+ E+NRWPPWLKPLL+E FFV CK H DSHKSECNMYCLDC NG LCSLCL HHK
Sbjct: 22  GAGGPEEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHK 81

Query: 64  DHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCE 123
           DHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+VVFLNERPQPRPGKGVTNTC+
Sbjct: 82  DHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCK 141

Query: 124 VCERSLL-DSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSN 183
           VC RSL+ DSFRFCSLGCKI GTSR  +K R  +     DS             SS+ + 
Sbjct: 142 VCYRSLVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETEDS-------------SSSIAI 201

Query: 184 NNDINRVQSFSPSTPP-PTSVNYRTAKRRKGIPHRAPMG 221
             +I  +QSFSPSTPP  TS N R  KRRKGIPHR+PMG
Sbjct: 202 GKNITNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 227

[Close]

BLAST of CmoCh06G006490 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 298.5 bits (763), Expect = 4.5e-81
Identity = 156/221 (70.59%), Postives = 177/221 (80.09%), Query Frame = 0


Query: 7   GPDVEDNR-WPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDH 66
           G + E N+ +P WLKPLLRE FFVQCK H DSHKSECNMYCLDC NG LCSLCL+ HKDH
Sbjct: 2   GAEEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDH 61

Query: 67  RAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 126
            AIQIRRSSYHDVIRVSEIQK LDI+GVQTY+INSA+VVFLNERPQPRPGKGV NTCEVC
Sbjct: 62  HAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVC 121

Query: 127 ERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDSEESYSSSNHRQSNSSNNSNNND 186
            RSL+DSFRFCSLGCKI G S+   KKR   T   SDS++SYSS++  +   +++  NN 
Sbjct: 122 YRSLVDSFRFCSLGCKISGISK---KKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNN- 181

Query: 187 INRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLIIQY 227
                SF+PSTPP ++VN R AKRRKGIPHRAP G LII+Y
Sbjct: 182 -----SFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

[Close]

BLAST of CmoCh06G006490 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 241.5 bits (615), Expect = 6.5e-64
Identity = 129/183 (70.49%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 44  MYCLDCMNGALCSLCLNHHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARV 103
           MYCLDC NG LCSLCL+ HKDH AIQIRRSSYHDVIRVSEIQK LDI+GVQTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKV 60

Query: 104 VFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSRSSQKKRVTITAAASDS 163
           VFLNERPQPRPGKGV NTCEVC RSL+DSFRFCSLGCKI G S+   KKR   T   SDS
Sbjct: 61  VFLNERPQPRPGKGVINTCEVCYRSLVDSFRFCSLGCKISGISK---KKRKEWTNNLSDS 120

Query: 164 EESYSSSNHRQSNSSNNSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAPMGSLI 223
           ++SYSS++  +   +++  NN      SF+PSTPP ++VN R AKRRKGIPHRAP G LI
Sbjct: 121 DDSYSSTSIGRLKKNDDIMNN------SFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLI 174

Query: 224 IQY 227
           I+Y
Sbjct: 181 IEY 174

[Close]

BLAST of CmoCh06G006490 vs. TAIR 10
Match: AT4G17900.2 (PLATZ transcription factor family protein )

HSP 1 Score: 228.0 bits (580), Expect = 7.5e-60
Identity = 122/179 (68.16%), Postives = 135/179 (75.42%), Query Frame = 0


Query: 44  MYCLDCMNGALCSLCLNHHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARV 103
           MYCLDC NG LCSLCL HHKDHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLAHHKDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKV 60

Query: 104 VFLNERPQPRPGKGVTNTCEVCERSLL-DSFRFCSLGCKIVGTSRSSQKKRVTITAAASD 163
           VFLNERPQPRPGKGVTNTC+VC RSL+ DSFRFCSLGCKI GTSR  +K R  +     D
Sbjct: 61  VFLNERPQPRPGKGVTNTCKVCYRSLVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETED 120

Query: 164 SEESYSSSNHRQSNSSNNSNNNDINRVQSFSPSTPP-PTSVNYRTAKRRKGIPHRAPMG 221
           S             SS+ +   +I  +QSFSPSTPP  TS N R  KRRKGIPHR+PMG
Sbjct: 121 S-------------SSSIAIGKNITNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 166

[Close]

BLAST of CmoCh06G006490 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-59
Identity = 124/237 (52.32%), Postives = 156/237 (65.82%), Query Frame = 0


Query: 11  EDNRWPPWLKPLLRESFFVQCKHHIDSHKSECNMYCLDCMNGALCSLCLNHHKDHRAIQI 70
           ED   PPWL P+LR S+FV C  H+DS+K+ECN++CLDC   A CS CL  HKDHR +QI
Sbjct: 11  EDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQI 70

Query: 71  RRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLL 130
           RRSSYH+V+RV+EIQK +DI+ VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RSLL
Sbjct: 71  RRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRSLL 130

Query: 131 DSFRFCSLGCKIVGTSR-------SSQKKRVTITAAASDSEESYSSSNHRQSNSSN---- 190
           DSFRFCSLGCK+ G  R       S + K        S+S+E+ + +  R++N+ N    
Sbjct: 131 DSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRLMS 190

Query: 191 ------------------NSNNNDINRVQSFSPSTPPPTSVNYRTAKRRKGIPHRAP 219
                              S+++      SFSP TPP    N+R + RRKG+PHRAP
Sbjct: 191 GLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 245

The following BLAST results are available for this feature:

BLAST of CmoCh06G006490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	1.9e-31	49.61	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmoCh06G006490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECV3	9.7e-124	100.00	uncharacterized protein LOC111431990 OS=Cucurbita moschata OX=3662 GN=LOC1114319...	[more]
A0A6J1L2M6	1.3e-120	97.76	uncharacterized protein LOC111498542 OS=Cucurbita maxima OX=3661 GN=LOC111498542...	[more]
A0A6J1CW01	1.3e-107	89.33	uncharacterized protein LOC111014906 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1HQK4	1.7e-107	85.78	uncharacterized protein LOC111465191 OS=Cucurbita maxima OX=3661 GN=LOC111465191...	[more]
A0A1S3CNY3	2.2e-107	90.00	uncharacterized protein LOC103503124 OS=Cucumis melo OX=3656 GN=LOC103503124 PE=...	[more]

BLAST of CmoCh06G006490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17900.1	4.8e-83	70.32	PLATZ transcription factor family protein	[more]
AT1G32700.1	4.5e-81	70.59	PLATZ transcription factor family protein	[more]
AT1G32700.2	6.5e-64	70.49	PLATZ transcription factor family protein	[more]
AT4G17900.2	7.5e-60	68.16	PLATZ transcription factor family protein	[more]
AT1G21000.1	1.3e-59	52.32	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 71..142 e-value: 2.4E-30 score: 105.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..226
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 6..222
None	No IPR available	PANTHER	PTHR31065:SF57	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 6..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G006490.1	CmoCh06G006490.1	mRNA