Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCCATCGGCGAAGCCGATATCTAGTCCAGGCCGGACGGAGAAATTCCCGCCGCCATTGATGAGGTTTTTGAGGAGCAATGTGGGGAGCAAAAGCAGAGGAAGGCGTTCGAGTCCGATGATGTTCATGAGGAAGAAGAACAACGCCACCACTGCCCATGAAACCCAAGAGCCTTCTTCCCCTAAAGTCACTTGTATTGGCCAAGTCCGAGTTCGCCGCTCCTCTACGCGCCGCCGAAAACGTCGCTGTGCCTCCACGCGCCGCCGTTGCTGCTGGTTCCGTGCTGCTCTGTTTTGCCCCTGGTTTCGAAGAAAAAATAAACCCAATTTTTATCCGATTTTCCAGAGATGGGTATCGTTTTTCCAAGGTGGGCTCCGTCGAAAACCCAAAATTAGAATAGATTCGCCGCCGCCGCCGCCGCCGCGTGAAACTCCCTTCCACGGCAGAGCTGAAATTTCAAACCCAGATACCCAAGTTGCCGCCGCTGCCGCCGTCCACGACGATGATGAAGAAGCAACAGCCAAAGCTTTTATTCCTTCTAATTCTTCGCCACCCAAAAATGCATTGTTACTAACAAGATGCAGATCTGCTCCATATCGATCGACATCATTAGCGAGTAGATTCTGGGGCTCTCCTCTAAGAAACGACGAAAATCTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAGGAACATAGCACAAAGCCCAACAATGGCGGAAAAGCAGTCGAGATTGAGAAACCCACATCCCAAAGAGTCTCAGTTTCGGATCAAGATCCAAGTGGGGGCTTAGAATTCGAGGAAGACGAGGAATTTGTGCAGAACATTGAGAATTCCACCACAGAAAGAATCACCAAATCCGCCATTATCGAACGAGAAAAAGCAGGGGATGATGAAGATGGGCTTGGAAGTTCATCCCGGCCATTAATTTTGACACGTTGCAAATCAGAACCGTCGAGAACGGCGGAGAAGATGAACCCAGAAATTGGATTCTGGAAAAAGAGAAGGTTGGGGATTCCTGATTCATGCTTACCAAACACAATTCATGATATATAG
mRNA sequence
ATGAAGCCATCGGCGAAGCCGATATCTAGTCCAGGCCGGACGGAGAAATTCCCGCCGCCATTGATGAGGTTTTTGAGGAGCAATGTGGGGAGCAAAAGCAGAGGAAGGCGTTCGAGTCCGATGATGTTCATGAGGAAGAAGAACAACGCCACCACTGCCCATGAAACCCAAGAGCCTTCTTCCCCTAAAGTCACTTGTATTGGCCAAGTCCGAGTTCGCCGCTCCTCTACGCGCCGCCGAAAACGTCGCTGTGCCTCCACGCGCCGCCGTTGCTGCTGGTTCCGTGCTGCTCTGTTTTGCCCCTGGTTTCGAAGAAAAAATAAACCCAATTTTTATCCGATTTTCCAGAGATGGGTATCGTTTTTCCAAGGTGGGCTCCGTCGAAAACCCAAAATTAGAATAGATTCGCCGCCGCCGCCGCCGCCGCGTGAAACTCCCTTCCACGGCAGAGCTGAAATTTCAAACCCAGATACCCAAGTTGCCGCCGCTGCCGCCGTCCACGACGATGATGAAGAAGCAACAGCCAAAGCTTTTATTCCTTCTAATTCTTCGCCACCCAAAAATGCATTGTTACTAACAAGATGCAGATCTGCTCCATATCGATCGACATCATTAGCGAGTAGATTCTGGGGCTCTCCTCTAAGAAACGACGAAAATCTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAGGAACATAGCACAAAGCCCAACAATGGCGGAAAAGCAGTCGAGATTGAGAAACCCACATCCCAAAGAGTCTCAGTTTCGGATCAAGATCCAAGTGGGGGCTTAGAATTCGAGGAAGACGAGGAATTTGTGCAGAACATTGAGAATTCCACCACAGAAAGAATCACCAAATCCGCCATTATCGAACGAGAAAAAGCAGGGGATGATGAAGATGGGCTTGGAAGTTCATCCCGGCCATTAATTTTGACACGTTGCAAATCAGAACCGTCGAGAACGGCGGAGAAGATGAACCCAGAAATTGGATTCTGGAAAAAGAGAAGGTTGGGGATTCCTGATTCATGCTTACCAAACACAATTCATGATATATAG
Coding sequence (CDS)
ATGAAGCCATCGGCGAAGCCGATATCTAGTCCAGGCCGGACGGAGAAATTCCCGCCGCCATTGATGAGGTTTTTGAGGAGCAATGTGGGGAGCAAAAGCAGAGGAAGGCGTTCGAGTCCGATGATGTTCATGAGGAAGAAGAACAACGCCACCACTGCCCATGAAACCCAAGAGCCTTCTTCCCCTAAAGTCACTTGTATTGGCCAAGTCCGAGTTCGCCGCTCCTCTACGCGCCGCCGAAAACGTCGCTGTGCCTCCACGCGCCGCCGTTGCTGCTGGTTCCGTGCTGCTCTGTTTTGCCCCTGGTTTCGAAGAAAAAATAAACCCAATTTTTATCCGATTTTCCAGAGATGGGTATCGTTTTTCCAAGGTGGGCTCCGTCGAAAACCCAAAATTAGAATAGATTCGCCGCCGCCGCCGCCGCCGCGTGAAACTCCCTTCCACGGCAGAGCTGAAATTTCAAACCCAGATACCCAAGTTGCCGCCGCTGCCGCCGTCCACGACGATGATGAAGAAGCAACAGCCAAAGCTTTTATTCCTTCTAATTCTTCGCCACCCAAAAATGCATTGTTACTAACAAGATGCAGATCTGCTCCATATCGATCGACATCATTAGCGAGTAGATTCTGGGGCTCTCCTCTAAGAAACGACGAAAATCTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAGGAACATAGCACAAAGCCCAACAATGGCGGAAAAGCAGTCGAGATTGAGAAACCCACATCCCAAAGAGTCTCAGTTTCGGATCAAGATCCAAGTGGGGGCTTAGAATTCGAGGAAGACGAGGAATTTGTGCAGAACATTGAGAATTCCACCACAGAAAGAATCACCAAATCCGCCATTATCGAACGAGAAAAAGCAGGGGATGATGAAGATGGGCTTGGAAGTTCATCCCGGCCATTAATTTTGACACGTTGCAAATCAGAACCGTCGAGAACGGCGGAGAAGATGAACCCAGAAATTGGATTCTGGAAAAAGAGAAGGTTGGGGATTCCTGATTCATGCTTACCAAACACAATTCATGATATATAG
Protein sequence
MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNNATTAHETQEPSSPKVTCIGQVRVRRSSTRRRKRRCASTRRRCCWFRAALFCPWFRRKNKPNFYPIFQRWVSFFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDDDEEATAKAFIPSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEEEDEEHSTKPNNGGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNIENSTTERITKSAIIEREKAGDDEDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPNTIHDI
Homology
BLAST of CmoCh06G003610 vs. ExPASy TrEMBL
Match:
A0A6J1GAY2 (uncharacterized protein LOC111452338 OS=Cucurbita moschata OX=3662 GN=LOC111452338 PE=4 SV=1)
HSP 1 Score: 698.0 bits (1800), Expect = 2.1e-197
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNNATTAHETQEPS 60
MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNNATTAHETQEPS
Sbjct: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNNATTAHETQEPS 60
Query: 61 SPKVTCIGQVRVRRSSTRRRKRRCASTRRRCCWFRAALFCPWFRRKNKPNFYPIFQRWVS 120
SPKVTCIGQVRVRRSSTRRRKRRCASTRRRCCWFRAALFCPWFRRKNKPNFYPIFQRWVS
Sbjct: 61 SPKVTCIGQVRVRRSSTRRRKRRCASTRRRCCWFRAALFCPWFRRKNKPNFYPIFQRWVS 120
Query: 121 FFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDDDEEATAKAFIP 180
FFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDDDEEATAKAFIP
Sbjct: 121 FFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDDDEEATAKAFIP 180
Query: 181 SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEEEDEEHSTKPNN 240
SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEEEDEEHSTKPNN
Sbjct: 181 SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEEEDEEHSTKPNN 240
Query: 241 GGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNIENSTTERITKSAIIEREKAGDD 300
GGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNIENSTTERITKSAIIEREKAGDD
Sbjct: 241 GGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNIENSTTERITKSAIIEREKAGDD 300
Query: 301 EDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPNTIHDI 354
EDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPNTIHDI
Sbjct: 301 EDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPNTIHDI 353
BLAST of CmoCh06G003610 vs. ExPASy TrEMBL
Match:
A0A6J1KWU4 (uncharacterized protein LOC111498309 OS=Cucurbita maxima OX=3661 GN=LOC111498309 PE=4 SV=1)
HSP 1 Score: 654.4 bits (1687), Expect = 2.6e-184
Identity = 341/353 (96.60%), Postives = 341/353 (96.60%), Query Frame = 0
Query: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNNATTAHETQEPS 60
MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNNATTAHETQEPS
Sbjct: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNNATTAHETQEPS 60
Query: 61 SPKVTCIGQVRVRRSSTRRRKRRCASTRRRCCWFRAALFCPWFRRKNKPNFYPIFQRWVS 120
SPKVTCIGQVRVRRSSTRRRKRRCASTRRRCCWFRAALFCPWF RKNKPN PIFQRWVS
Sbjct: 61 SPKVTCIGQVRVRRSSTRRRKRRCASTRRRCCWFRAALFCPWFLRKNKPNSSPIFQRWVS 120
Query: 121 FFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDDDEEATAKAFIP 180
FFQGG RRKPKIRIDS PPPPPRETPFHGRAEISNPDTQV AAAVHDDDEEATAKAFIP
Sbjct: 121 FFQGGFRRKPKIRIDS-PPPPPRETPFHGRAEISNPDTQV--AAAVHDDDEEATAKAFIP 180
Query: 181 SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEEEDEEHSTKPNN 240
SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLK EEEEEEEDEEHSTKPNN
Sbjct: 181 SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLK--EEEEEEEDEEHSTKPNN 240
Query: 241 GGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNIENSTTERITKSAIIEREKAGDD 300
GKAVEIEKPTSQR SVSDQDPSGGLEFEEDEEFVQNIENSTTERITKSAIIEREKAG D
Sbjct: 241 SGKAVEIEKPTSQRASVSDQDPSGGLEFEEDEEFVQNIENSTTERITKSAIIEREKAG-D 300
Query: 301 EDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPNTIHDI 354
EDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPNTIHDI
Sbjct: 301 EDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPNTIHDI 347
BLAST of CmoCh06G003610 vs. ExPASy TrEMBL
Match:
A0A5D3DNC1 (Chromo domain-containing protein cec-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002420 PE=4 SV=1)
HSP 1 Score: 500.4 bits (1287), Expect = 6.3e-138
Identity = 275/351 (78.35%), Postives = 300/351 (85.47%), Query Frame = 0
Query: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGR-RSSPMMFMRKKNNATTAHETQEP 60
MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGR R+SPMMFMR+K NA TA ETQEP
Sbjct: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRSRASPMMFMRRKTNA-TAIETQEP 60
Query: 61 SSPKVTCIGQVRVRRSSTRRRKRRCAST-RRRCCWFRAALFCPWFRRKNKPNFYPIFQRW 120
SSPKVTCIGQVRVRR++TRRRKR T RRRC W RAALFCP FR+K KPN PIFQR
Sbjct: 61 SSPKVTCIGQVRVRRATTRRRKRSGTPTRRRRCRWIRAALFCPCFRKKFKPNSSPIFQRL 120
Query: 121 VSFFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDDDEEATAKAF 180
VSFFQ G RRKPK+R +S PPRETPFHG EISN + QV AA +D++EE TA+A
Sbjct: 121 VSFFQCGFRRKPKVRTNS----PPRETPFHGGVEISNTEIQVVAAVD-NDEEEEETAEAL 180
Query: 181 IPSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEEEDEEHSTKP 240
I SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPL+N+EN +EE+EE++E STKP
Sbjct: 181 ISSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLKNEEN-----QEEKEEEKEQSTKP 240
Query: 241 NNGGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNI-ENSTTERITKSAIIEREKA 300
NNGGK VEIEKPTSQR SVSDQDPSGGLEFEEDEEF +NI E+S ERI SA I+REK
Sbjct: 241 NNGGKTVEIEKPTSQRASVSDQDPSGGLEFEEDEEFAKNIDEHSIPERIVTSANIKREKT 300
Query: 301 GDDEDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPN 349
G++E+ LGSSSRPLILTRCKSEPSRTAEKMNPE+GFWKKRRLGIPDSCLPN
Sbjct: 301 GEEEEALGSSSRPLILTRCKSEPSRTAEKMNPEVGFWKKRRLGIPDSCLPN 340
BLAST of CmoCh06G003610 vs. ExPASy TrEMBL
Match:
A0A1S3B5Q8 (uncharacterized protein LOC103486466 OS=Cucumis melo OX=3656 GN=LOC103486466 PE=4 SV=1)
HSP 1 Score: 500.4 bits (1287), Expect = 6.3e-138
Identity = 275/351 (78.35%), Postives = 300/351 (85.47%), Query Frame = 0
Query: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGR-RSSPMMFMRKKNNATTAHETQEP 60
MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGR R+SPMMFMR+K NA TA ETQEP
Sbjct: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRSRASPMMFMRRKTNA-TAIETQEP 60
Query: 61 SSPKVTCIGQVRVRRSSTRRRKRRCAST-RRRCCWFRAALFCPWFRRKNKPNFYPIFQRW 120
SSPKVTCIGQVRVRR++TRRRKR T RRRC W RAALFCP FR+K KPN PIFQR
Sbjct: 61 SSPKVTCIGQVRVRRATTRRRKRSGTPTRRRRCRWIRAALFCPCFRKKFKPNSSPIFQRL 120
Query: 121 VSFFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDDDEEATAKAF 180
VSFFQ G RRKPK+R +S PPRETPFHG EISN + QV AA +D++EE TA+A
Sbjct: 121 VSFFQCGFRRKPKVRTNS----PPRETPFHGGVEISNTEIQVVAAVD-NDEEEEETAEAL 180
Query: 181 IPSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEEEDEEHSTKP 240
I SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPL+N+EN +EE+EE++E STKP
Sbjct: 181 ISSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLKNEEN-----QEEKEEEKEQSTKP 240
Query: 241 NNGGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNI-ENSTTERITKSAIIEREKA 300
NNGGK VEIEKPTSQR SVSDQDPSGGLEFEEDEEF +NI E+S ERI SA I+REK
Sbjct: 241 NNGGKTVEIEKPTSQRASVSDQDPSGGLEFEEDEEFAKNIDEHSIPERIVTSANIKREKT 300
Query: 301 GDDEDGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLGIPDSCLPN 349
G++E+ LGSSSRPLILTRCKSEPSRTAEKMNPE+GFWKKRRLGIPDSCLPN
Sbjct: 301 GEEEEALGSSSRPLILTRCKSEPSRTAEKMNPEVGFWKKRRLGIPDSCLPN 340
BLAST of CmoCh06G003610 vs. ExPASy TrEMBL
Match:
A0A0A0LDY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736940 PE=4 SV=1)
HSP 1 Score: 490.0 bits (1260), Expect = 8.5e-135
Identity = 278/355 (78.31%), Postives = 300/355 (84.51%), Query Frame = 0
Query: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGR-RSSPMMFMRKKNNATTAHETQEP 60
MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGR R+SPMMFMR+KNNA TA ETQEP
Sbjct: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRSRASPMMFMRRKNNA-TAIETQEP 60
Query: 61 SSPKVTCIGQVRVRRSSTRRRKRRCASTRRRCCWFRAALFCPWFRRKNKPNFYPIFQRWV 120
SSPKVTCIGQVRVRRSSTRRRKR TRRRC W RAA CP FR+K KPN PIFQR V
Sbjct: 61 SSPKVTCIGQVRVRRSSTRRRKRSGTRTRRRCRWIRAARCCPCFRKKFKPNSSPIFQRLV 120
Query: 121 SFFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDDD---EEATAK 180
SFFQ G RRKPK+R +S PPRE PF G EISN + QV AAV DDD EE TA+
Sbjct: 121 SFFQCGFRRKPKVRTNS----PPREPPFRGGVEISNKEIQV--VAAVDDDDAEEEEETAE 180
Query: 181 AFIPSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEEEDEEHST 240
A I SNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPL+N+EN +EE EEEE+++E ST
Sbjct: 181 ALISSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLKNEEN--QEETEEEEKEKEQST 240
Query: 241 KPNNGGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNI-ENSTTERITKSAIIERE 300
KPNNGGK VEIEKPTSQR SVSDQDPSGGLEFEE+EEF +NI E+S ERI KSA I++E
Sbjct: 241 KPNNGGKTVEIEKPTSQRASVSDQDPSGGLEFEENEEFAKNIDEHSVPERIVKSANIKQE 300
Query: 301 KAGDDEDG-LGSSSRPLILTRCKSEPSRTAEKMNPEIG-FWKKRRLGIPDSCLPN 349
K G++E+ LGSSSRPLILTRCKSEPSRTAEKMNPE+G FWKKRRLGIPDSCLPN
Sbjct: 301 KTGEEEEEVLGSSSRPLILTRCKSEPSRTAEKMNPEVGLFWKKRRLGIPDSCLPN 346
BLAST of CmoCh06G003610 vs. TAIR 10
Match:
AT2G37100.1 (protamine P1 family protein )
HSP 1 Score: 149.1 bits (375), Expect = 6.9e-36
Identity = 128/354 (36.16%), Postives = 181/354 (51.13%), Query Frame = 0
Query: 4 SAKPISSPGRTEKFPPPLMRFLRSNVGSKSRGRRSSPMMFMRKKNNATTAHETQEPSSPK 63
S++P+SSPGRTE PP LMRFLR+ S+SR R P+ F RK NA+ A ETQEP+SPK
Sbjct: 5 SSRPVSSPGRTEN-PPLLMRFLRTKSRSRSRSRSRRPIFFRRK--NASAAAETQEPTSPK 64
Query: 64 VTCIGQVRVRRS-------------STRRRKRRCASTRRRCCWFRAALFCPWFRRKNKPN 123
VTC+GQVR+ RS +T RR++ RRC W + A C F KP
Sbjct: 65 VTCMGQVRINRSKKPKPETARVSGGATERRRQ-----SRRCGWVKNAFPCHSFTGIIKPT 124
Query: 124 -FYPIFQRWVSFFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDD 183
F P++++W SF +K + R S R P GR+ + P+ + +
Sbjct: 125 CFSPVWRKWKSFSHASFSKKSEKRSSS-----SRSEPIFGRSTV-EPEEPEETRKEENQE 184
Query: 184 DEEATAKAFIPSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEEEE 243
+E ++ K+F ++PP+NA LLTRCRSAPYRS S A+ + +++EE +
Sbjct: 185 EEASSCKSF---TATPPRNAFLLTRCRSAPYRSPSSANSLF----------EDQEETNKA 244
Query: 244 EDEEHSTKPNNGGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNIENSTTERITKS 303
+ H+ +S+ VSVS++ + E TTER+ S
Sbjct: 245 PFQRHA---------------SSENVSVSEEPKTSVTE--------------TTERLEDS 295
Query: 304 AIIEREKAGDDE---DGLGSSSRPLILTRCKSEPSRTAEKMNPEIGFWKKRRLG 341
RE A +E LGS + LILTRC SEP+R + PE+G+ + RLG
Sbjct: 305 ---RRESAASEEPKRSVLGSPRQCLILTRCNSEPAR----LVPEMGYRQNPRLG 295
BLAST of CmoCh06G003610 vs. TAIR 10
Match:
AT5G03110.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: protamine P1 family protein (TAIR:AT2G37100.1); Has 81 Blast hits to 73 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 123.6 bits (309), Expect = 3.1e-28
Identity = 125/340 (36.76%), Postives = 158/340 (46.47%), Query Frame = 0
Query: 1 MKPSAKPISSPGRTEKFPPPLMRFLR--SNVGSKSRGR-------RSSPMMFMRKKNNAT 60
M S +P+SSPGR EK+PPP M FLR SN GS SR R R+SP+ R K+ A
Sbjct: 1 MMISRRPVSSPGRVEKYPPPFMGFLRSKSNGGSTSRSRSRSRGRSRASPLFVRRNKSAAA 60
Query: 61 TAHETQEPSSPKVTCIGQVRVRRSSTR-RRKRRCASTRRRCCWFRAALFCPWFRRKNKP- 120
A QEPSSPKVTC+GQVRV RS + + + R TRRRC W R A F F K K
Sbjct: 61 VA---QEPSSPKVTCMGQVRVNRSKPKIKPESRDNPTRRRCEWLRNASFYNKFAGKIKTM 120
Query: 121 NFYPIFQRWVSFFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAAAVHDD 180
F+P + R SF K K DSP R+++ +P T+ +
Sbjct: 121 TFWPKW-RLCSFSCACRNLKEK---DSP------------RSQLDHPTTESVREIKEEIE 180
Query: 181 DEE--ATAKAFIPSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEEEEE 240
EE K F+ ++PP NALLLTR RSAPYRS+SLA RFW EE +
Sbjct: 181 GEENFEIPKLFVSPATTPPINALLLTRSRSAPYRSSSLAFRFW------------EENNQ 240
Query: 241 EEEDEEHSTKPNNGGKAVEIEKPTSQRVSVSDQDPSGGLEFEEDEEFVQNIENSTTERIT 300
E + + + + V IEK + + E+V E E T
Sbjct: 241 REVESQQNVRSEKTDSEVPIEK----------------INGFHEPEYVDRDE----EEFT 273
Query: 301 KSAIIEREKAGDDEDGLGSSSRPLILTRCKSEPSRTAEKM 328
K + R +LTR KSEP+R EKM
Sbjct: 301 KLRFV----------------RQPVLTRSKSEPARIGEKM 273
BLAST of CmoCh06G003610 vs. TAIR 10
Match:
AT3G15095.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 9762 Blast hits to 6439 proteins in 764 species: Archae - 77; Bacteria - 1339; Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131; Other Eukaryotes - 3849 (source: NCBI BLink). )
HSP 1 Score: 43.1 bits (100), Expect = 5.3e-04
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 0
Query: 309 RPLILTRCKSEPSRTAEKMNPEIGFWKKRRL 340
+P +L RCKSEP ++A K+ PE FWK R+L
Sbjct: 637 QPPVLPRCKSEPRKSASKLAPEACFWKNRKL 667
HSP 2 Score: 35.0 bits (79), Expect = 1.4e-01
Identity = 102/380 (26.84%), Postives = 141/380 (37.11%), Query Frame = 0
Query: 1 MKPSAKPISSPGRTEKFPPPLMRFLRSNVGSK--SRGRRSSPMMFM---RKK------NN 60
M+ S+K I SP R+ L R LR++ K S G +SPM RK+ N+
Sbjct: 41 MRLSSKSIHSPARSACLTTSLSRRLRTSGSLKNASAGVLNSPMFGANGGRKRSGSGYENS 100
Query: 61 ATTAHETQEPSSPKVTCIGQVRVRRSSTRRRKRRCASTR-------RRC---------CW 120
+ EPSSPKVTCIGQVRV+ ++K R S R RR C
Sbjct: 101 NNNNNNNIEPSSPKVTCIGQVRVKTRKHVKKKMRARSRRKGGENSFRRSVDQNDGGGGCR 160
Query: 121 FRAA---------LFCPWFRR--KNKPNFYP----------------------------- 180
F+A+ C R F+P
Sbjct: 161 FKASENRLVHLPVTICESLRSFGSELNCFFPCRSSCTENSHGDGRRAESNNDGCGGGGGG 220
Query: 181 ------IFQRW---VSFFQGGLRRKPKIRIDSPPPPPPRETPFHGRAEISNPDTQVAAAA 240
+F RW V GG RR+ ++ + R D
Sbjct: 221 SNSCGAVFTRWFVAVEETSGGKRREIELVVGGEDEVEEDRRRSRRRHVFEGLDLSEIEMK 280
Query: 241 AVHDDDEEATAKAFIPSNSSPPKNALLLTRCRSAPYRSTSLASRFWGSPLRNDENLKEEE 285
+ E + I SPPKNALLL RCRS P + +LA+R L ++ + EE
Sbjct: 281 TEKKERGEEVGRMSI---CSPPKNALLLMRCRSDPVKVAALANRVRERQLSLNDGVYTEE 340
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GAY2 | 2.1e-197 | 100.00 | uncharacterized protein LOC111452338 OS=Cucurbita moschata OX=3662 GN=LOC1114523... | [more] |
A0A6J1KWU4 | 2.6e-184 | 96.60 | uncharacterized protein LOC111498309 OS=Cucurbita maxima OX=3661 GN=LOC111498309... | [more] |
A0A5D3DNC1 | 6.3e-138 | 78.35 | Chromo domain-containing protein cec-1 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3B5Q8 | 6.3e-138 | 78.35 | uncharacterized protein LOC103486466 OS=Cucumis melo OX=3656 GN=LOC103486466 PE=... | [more] |
A0A0A0LDY5 | 8.5e-135 | 78.31 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736940 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G37100.1 | 6.9e-36 | 36.16 | protamine P1 family protein | [more] |
AT5G03110.1 | 3.1e-28 | 36.76 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT3G15095.1 | 5.3e-04 | 54.84 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |