CmoCh06G003490 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G003490
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nuclear pore complex protein NUP62 isoform X1
Location	Cmo_Chr06: 1698037 .. 1704265 (-)
RNA-Seq Expression	CmoCh06G003490
Synteny	CmoCh06G003490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAATTTTAGAGTACTTTCAGATATTGATTATTGGATATTTTGGACTATGATGTAGTTATTACTCTCTTTTTGCACTCTGAATTTTGACAACTTGTGGCATTTTTGAATTTGCTCAAACTATGGCTATGTTGAGTTCTTGATTGGTTGGTGTTCATGTTAGCTAGGAATTCTTTTTGGGGTCATAATGTCATGTTACTCTTTGGGCTTCTTCCCTTTTCCTTTTGCCCTCTGTGATCAGTGTAACTGCCCAAAGGAGTTTTAAAGTCTTGAAAGGGGAAAGCCCTCAGAGGACAATATAGCAATAGACCTTGGCTTACATTTAGGGTTCATTCAGATTTAACTTTTTTTTCTATATGGGAAATTATAATGCAATTATATTTTTTCTTAATATGAAAACTTTGATAAATTTATTTTCAAAATCATTTGCAATTCAGTTTCAGTATATTTTTAAATCCTAACAATTAAAATTGATTATAGAATTAAATAAAATTATAATAAATATGTTCTTAGACCATTTTTTTTTCATTTTTGAAAACTCTTCTAAATTTAGCTGTAAAATAAAATTATAGAATTAAATAAATATGTCCTAACAATTTATAATTGTTACAATTAAATTATATTTTCTAAATCCACAAAAATTCAGAATTACAATAAAAAGGAAATTAATCTTTTATATAAAAAAAATTTAAGGATTTAAATTGTTTACCTTTTAGACTTAAAATATAGTTGAAGTAGAATCGACAATAATTTAATTGAAACAATACGTATTTTAGTAAATTTAAAAACTTAATTTCAATGAATTGTGGAAAATTTTATTAGTGCGCCGTGTTTTTTCTTTTTTAATTTCTAATTTTAAACCGCCACTTCCACCAATTTCAAACAAACAAATACAAATACAAGAAAAGATCAGAACCCCTTTTCCCTCCCCTAAACCTCCCGCCCCTCTCTCTCCGCCTTCGATTTTTCAAATCATTCAATCCGGGTCGGACAGTTCCTCACCTCTTCTGCGCTTCTTCCAGATCTGTCTCATGGACGCCGTATATACTGATCACGATCGCCGTTTTAGCCGTCTCAGCCTCATCGATTTCGCTTCCGAGGACGATTTGCTAATCTCTTCTCCTTCCTGCGACTTCCATGACGCCAATTCTTTAGGTCCGCTCCGGCCGTTCTCATTTCAGTCTCGTTCTGTTTCATTGTGTTGTGAATTTTACTTTTACTGATAATTTTATCCTTTTCCCGCTTGTTCTATGTATTGAGCTGCTCGTGTTCGATTTCTGTTCTGTGGTTTTTTTTTTTCCTCGGATGTTTCATTTTCTTTTTGTTTTTTCAACTCAATTGGCAGCAGTCGCTTTCACTTTTTTTTTTTTTTTTGGTTGAAAATTAACCCTGTTGTTCATGTGTGGAAGCTTTGTATTGTTTTTCTAGTTTTGATTTTACATAATGTTTGAGAATCTTGAAGTTTTGATGATTGTTTTGGGCTTCGGTTTTGTGTAGGCTTTGCAAAGGAGGATGAGGAACAGGACAATTTTGAACGATTAGAGACTGTGGATTCTAACAGAATAGAGGAAAGAACAGATGGCTTCGAACAGAGAGAGGATGAACCTCAATTACTCCCATCTTCGGAACCGGAAAGGATCGAAAGAAATGGGAAATATAACTTGCGTAAGAGTTTAGCATGGGATAGTGCTTTCTTAACTGGTGCAGGTATTCTTTTATTTGCATTTGGAATGTGACATTAGTTTTGTCCCAGTATTCCTCTTACATATATATAACTTCTTGTATTTCAGGGTTTTTGGATCCTGAAGAGTTAACTAGCATGATTGCACCAGTGGGCAGGCATGAAAAACGTGTATTACCCATAATTCCAGAAGATGTTCTGAAATCTTCAGATTCAATTTCTACATTGGGTAGTGAAATTATGCCATTGGAAAGCATTGAGGGCAATTTATTCGAAGATGTTAGGGCTTCAATTCAGAAATCTAGTAGAACAATTGGGAAATCTAACTCGAGGATTAAAGTTGAATCCGGGCGACAGGGAGCACTAAAACTGCCTTGTGAGTAACTTCAAACACAAAAATTTTAGTTTAATAATTTTTTTTTTTTTTGATAGTTTTATCTAGATACAATAAGCCCTTTCTCAATAACCCAACTTCATAATGGGAGCGGTACTTGAGTTTTGATATGGTTCCTGCTTTAAGAACCACTTTTTCTTTTTAAAACATGGAGCTACTTGCGTCCTATATCAAATTGCCACCTTCTATGTATTTAGATGGAAAGATTCATGCGGACCAGATTACAGAACATTAATATTTTCACTTCTTTATATTTTCCTCGACTAGTTTGAGACAGCTGAGAGATTTTTCACCTTCTTCCCTCTCCCAATGACAATTCACATCTGTGTTTTTTTTTGTTCGTTTGGACCTTTTCGTTTCTTTTCTTTTTGCTTCATGCTAATCTGTCTGTTGCAACTTTCGAGTAATTATTCATTAATTCTGCAGGAGATATTTCGTTGTGGGTTTAGCAAGATTTATGAGTCTTTTGTAATATCTTTTGTATCTCATCAGAACTGAATCTGACATTACTCATTATTTTCAGCTCCAGGACGGCTTGATCTTACTTCACAAAATAAGGCAAGTTAAATGAATTTTTCAATCCTTTTGGTGTTTCACAGCAATTTTTTCTTTCTTCCTTATCCTTTCAAAAGTTGTATTTTGATGCTTGAATTTTCATATACAGTTCCTTTTGGCCCTTGTTATTAGATATTTGTCTAGCATTTAACTGAAACTTTGGTTCACTGGTTCTCAGAAATGAAATCACACCTTATATAGGTGTTGGTTAAAACACTGTCATCTGAAAATTCACTTAAGAGCTTAGAAAATTTTTATTTTCAGGGACCAAAAAAGATCTTTGTGCTCAGCTTAAGGATTAGAATAGAACATTTGAAAGTATATATCAAAATAAAATAAATGTATAAGTACAAAGGTCAAAATTAGATTTAAACCTTTTTTTACATATTCAAACTATAATGTTCCAGTGTAACATTTCAGATAAAGGACGGGTCTGCGTCCAGTAAGCAAAGTGATGGGTTGCAAGGACCTAGGAGAACCACTAAGCAGAATTCTTCACAACCACGCGAGGCACAGGTGAAGTATAAGCCTAAGTTTTTTTATAACTGATCTTATGTAATTCAAATATCTCTTGGCTTCTGTGGCTATTAAACCAGAGCATGGTTAGTTGCATTAACTGAGACACTGGCAATATTATTTCTAGCTGTTTTGACTGGATTACATTATATTCCAGTAGTCTGAAATTTGTGTTAAAGTTCACAGTGTTCGTTAGCTTGTAGTGACTGGTGGCCAAGGAAGGCGAGTGTACAACACCTGACTATACATTAGCATATGGCTGTCTAATAGCGATGTCATTTCTTGATCGTCCATTTTCTACTTATTTGCCCCACATATTTTTGCTGCTTCTGAAAAAGAAAATATTCCTACTTTTGAAGCAACTGAAGGCAATGGGCAAGCTTCCTTCAAACTCAACGTTGACCAAGAGGCCTTCACTTGCCGCCACTGTGAATGATAGTACTACGAGTGGTGCAGGATCTGCAGGTAACTAAAACTTGAATTTAGCTAAGCTAAATTTGTTCTTTGAACTGTGATGCTTGTATCTATCTATCCTGAATTTTCTCATGCGAATTGCAGATGGGCAGGATTCAGTTGGTCTTAGATCTACTACACACAAGCTTTCCCGACTTCCAACTGCCGGCACGAGGGAGCAAAAGACTTCCTCTGAAGTTTCTAAAAGTTCATCTATCAAGGTCGGTAAATCTTCCTCCAAAGATGCAAGGATAAAAACAGATTGTAAGGCTTCACCTTCCTCTGGTAGCACTCAGAAAACACAATCTCGAGTTGCACCTAAGGTCAAGACTCGTATTGGGAATTCTCGTCTCCCTTCCTACTCGATATCTCAAAGTAAGCATTCTTCAGGAATATCATCTGCTAGCTCTAAAAGTGAGTGGTCGACAGAGTCGTCATCAAATTCCACTCATGAACTTCAATCTAATAGCTCAAGAGCCAGCCTTCACTCAATTTCGAGCAAAAGAATCTCCGTAGACAGCGATGCATCTCATGATGGAAGTAACCCTGCTGTTGGATCCCATACTCAAACTACTGGCTCAATAAAGCCTTCGGGCCTTCGATTGCCATCACCTAAAATCGGGTACTTTGATGGGGTAAGTTTTGTGTTTTATTGTATCAAGTATCTGAGACTACTTATTTGTAGACCCAATATTCAAAAAGCAATAACCAAAATGGTTATCAAAATGGGAAATACCATTTTATGTTTTTAATTTTTCAAAATTTTAGAATTGAATATTTTTTTAATACGTTTTCATGACTGCATTTCACAGGGGAAAACTTCTATCATGAAATCTAATGTGTCTGTACCTGGTGGCACGACTAGGATTGGAGCTGGAAATGTCAGCGCAATTGGAGGCCAAAATAAGACCAAGCCTTCGAAGCTTCAACCTGTTACAGTGTTGCCCAAGAGCACAACTCGTGCTGTTAGTCAGCCTAATTTGAATTTGAAATCTCATAAAACCACTGCAACTAAGATGTCCAAAACGAATGAACTCGACCAAGAAGTCAAAGAGCTTGGTTGTGATGGATCAAATACTGATATGCATAATTCAGATGTATGTGCGATTTCAATTGCCACGAGGAAGATGAGCCTAGAAAATGAAGCAGGAAGTAATGCAAACGAAACGACATCAGCGAATACTGATGGAGAACTTAACGGATTACAAAACTTCGGGACCTGATGTTGATGGTATACTTCCATTTCAGAGGATCCTTGAATGTGATAAGAGAATTTGTTCAAGAGGGTTCAATGTAATACCGTGGAAAGAATTCATTACGAAGCCAACTGTATGCTCTTGCAGAAGGTAAGTCGGAATCATGAATATGGTTTAGTATCAACTTACCAAAAGAGTATAACTGTTCTAAAGTATTCTCGGCTTGTGAATATTATCTGATAATGTTCAAAGGAAAGCTTCCCACCTTCTTCTGAAAACTCAAAAAGTATTCTCCTCTCACTGCTCATTTAACTTTGGTAACTGTTGTTCATTTAACTTCGGTAACTGTTGTTGACAAAGAACTTATCATCTCTAACTGAGGATCTCTCTGTCTCAGCTGCGGCCTCAGATATGGATCAAGTAAGACCCATCTTGCCATCTAAGCAGACCGTTCTTAGAACAAACAGTTCTAATGTTGTGGCCTGTCCAGGTGTGTCCGTCTGGGGTTTCTGGTGGAATGTGAAGTTCTGCTGTGCTGCATTTGAGCATCCGATACCAATTACATGGAGACGTTGAGTGATCTGAGTTGGTATTGTGTGTGTCGTCAACTGCTTGTGGGTTTTGGGAACAAGATTGACCAGTGATTCGAATTGGGATCGTCATGTTCGTCATGCTTGTGAGCTTTGTGAACAAGATTGACCAGTGATTTGAGTTGAGTATCATTGTGTTCTTAATGCTTCTGATAGCTTTGGGAACCAGAGTGACCAGTTATTCGAGTTGGTATCGTCGTGTTCGCTGTGCTTGTGAGCTTTGGGAACAACAGTTTTGAAAGATTGAAGAGGTGTTTGGTTACGTTAGTTTCACACCATGCGGAACCCAGAAATGGTTGGTATGTTTGAACCTTGTTAGTTCATGAATAGTACTGTAGATGTTCCTCTTTTAACCATTTTGCTGAACTAAACATTTCTTATTTCACAGAATGGTGTAATTGAATGATAATTTTGTAGGAGTTAATAAAAAAATAAATAGAATTGATGTACGAACGATTTTCAAATTGAACAAACCCAATTAGCCAGTAAAACTTAGTTGATTTGGGAACATATTAAATTAAAACACGTTACATTAAATAACAATCCATGATTCAGAAATACAACATTTAAGGTCCTACAATTAAAACCAAGAAGGAAAAAACTACCATGTACAGGCTAATCCAAGTATCTCTACTAACAATACCCTGAAAAAAGTATCAGCCATGTCCTATTTGTTTGCAAGTTAACTCTACCCAGTCAAATTATGGATATGAATTGAACAACAGACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAAAGTAGCACAGACCTGTTTCAAACCTGA

mRNA sequence

ATGGTTAATTTTAGAGTACTTTCAGATATTGATTATTGGATATTTTGGACTATGATTTCCTCACCTCTTCTGCGCTTCTTCCAGATCTGTCTCATGGACGCCGTATATACTGATCACGATCGCCGTTTTAGCCGTCTCAGCCTCATCGATTTCGCTTCCGAGGACGATTTGCTAATCTCTTCTCCTTCCTGCGACTTCCATGACGCCAATTCTTTAGGCTTTGCAAAGGAGGATGAGGAACAGGACAATTTTGAACGATTAGAGACTGTGGATTCTAACAGAATAGAGGAAAGAACAGATGGCTTCGAACAGAGAGAGGATGAACCTCAATTACTCCCATCTTCGGAACCGGAAAGGATCGAAAGAAATGGGAAATATAACTTGCGTAAGAGTTTAGCATGGGATAGTGCTTTCTTAACTGGTGCAGGGTTTTTGGATCCTGAAGAGTTAACTAGCATGATTGCACCAGTGGGCAGGCATGAAAAACGTGTATTACCCATAATTCCAGAAGATGTTCTGAAATCTTCAGATTCAATTTCTACATTGGGTAGTGAAATTATGCCATTGGAAAGCATTGAGGGCAATTTATTCGAAGATGTTAGGGCTTCAATTCAGAAATCTAGTAGAACAATTGGGAAATCTAACTCGAGGATTAAAGTTGAATCCGGGCGACAGGGAGCACTAAAACTGCCTTCTCCAGGACGGCTTGATCTTACTTCACAAAATAAGATAAAGGACGGGTCTGCGTCCAGTAAGCAAAGTGATGGGTTGCAAGGACCTAGGAGAACCACTAAGCAGAATTCTTCACAACCACGCGAGGCACAGCAACTGAAGGCAATGGGCAAGCTTCCTTCAAACTCAACGTTGACCAAGAGGCCTTCACTTGCCGCCACTGTGAATGATAGTACTACGAGTGGTGCAGGATCTGCAGATGGGCAGGATTCAGTTGGTCTTAGATCTACTACACACAAGCTTTCCCGACTTCCAACTGCCGGCACGAGGGAGCAAAAGACTTCCTCTGAAGTTTCTAAAAGTTCATCTATCAAGGTCGGTAAATCTTCCTCCAAAGATGCAAGGATAAAAACAGATTGTAAGGCTTCACCTTCCTCTGGTAGCACTCAGAAAACACAATCTCGAGTTGCACCTAAGGTCAAGACTCGTATTGGGAATTCTCGTCTCCCTTCCTACTCGATATCTCAAAGTAAGCATTCTTCAGGAATATCATCTGCTAGCTCTAAAAGTGAGTGGTCGACAGAGTCGTCATCAAATTCCACTCATGAACTTCAATCTAATAGCTCAAGAGCCAGCCTTCACTCAATTTCGAGCAAAAGAATCTCCGTAGACAGCGATGCATCTCATGATGGAAGTAACCCTGCTGTTGGATCCCATACTCAAACTACTGGCTCAATAAAGCCTTCGGGCCTTCGATTGCCATCACCTAAAATCGGGTACTTTGATGGGGGGAAAACTTCTATCATGAAATCTAATGTGTCTGTACCTGGTGGCACGACTAGGATTGGAGCTGGAAATGTCAGCGCAATTGGAGGCCAAAATAAGACCAAGCCTTCGAAGCTTCAACCTGTTACAGTGTTGCCCAAGAGCACAACTCGTGCTGTTAGTCAGCCTAATTTGAATTTGAAATCTCATAAAACCACTGCAACTAAGATGTCCAAAACGAATGAACTCGACCAAGAAGTCAAAGAGCTTGGTTGTGATGGATCAAATACTGATATGCATAATTCAGATCGAATACTGATGGAGAACTTAACGGATTACAAAACTTCGGGACCTGATGTTGATGGTATACTTCCATTTCAGAGGATCCTTGAATGTGATAAGAGAATTTGTTCAAGAGGGTTCAATGTAATACCGTGGAAAGAATTCATTACGAAGCCAACTGTATGCTCTTGCAGAAGCTGCGGCCTCAGATATGGATCAAGTGTGTCCGTCTGGGGTTTCTGGTGGAATGTGAAGTTCTGCTGTGCTGCATTTGAGCATCCGATACCAATTACATGGAGACTTATTCGAGTTGGTATCGTCGTGTTCGCTGTGCTTGTGAGCTTTGGGAACAACAGTTTTGAAAGATTGAAGAGGTGTTTGGTTACGTTAGTTTCACACCATGCGGAACCCAGAAATGGTCCTACAATTAAAACCAAGAAGGAAAAAACTACCATGTACAGGCTAATCCAAACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAAAGTAGCACAGACCTGTTTCAAACCTGA

Coding sequence (CDS)

ATGGTTAATTTTAGAGTACTTTCAGATATTGATTATTGGATATTTTGGACTATGATTTCCTCACCTCTTCTGCGCTTCTTCCAGATCTGTCTCATGGACGCCGTATATACTGATCACGATCGCCGTTTTAGCCGTCTCAGCCTCATCGATTTCGCTTCCGAGGACGATTTGCTAATCTCTTCTCCTTCCTGCGACTTCCATGACGCCAATTCTTTAGGCTTTGCAAAGGAGGATGAGGAACAGGACAATTTTGAACGATTAGAGACTGTGGATTCTAACAGAATAGAGGAAAGAACAGATGGCTTCGAACAGAGAGAGGATGAACCTCAATTACTCCCATCTTCGGAACCGGAAAGGATCGAAAGAAATGGGAAATATAACTTGCGTAAGAGTTTAGCATGGGATAGTGCTTTCTTAACTGGTGCAGGGTTTTTGGATCCTGAAGAGTTAACTAGCATGATTGCACCAGTGGGCAGGCATGAAAAACGTGTATTACCCATAATTCCAGAAGATGTTCTGAAATCTTCAGATTCAATTTCTACATTGGGTAGTGAAATTATGCCATTGGAAAGCATTGAGGGCAATTTATTCGAAGATGTTAGGGCTTCAATTCAGAAATCTAGTAGAACAATTGGGAAATCTAACTCGAGGATTAAAGTTGAATCCGGGCGACAGGGAGCACTAAAACTGCCTTCTCCAGGACGGCTTGATCTTACTTCACAAAATAAGATAAAGGACGGGTCTGCGTCCAGTAAGCAAAGTGATGGGTTGCAAGGACCTAGGAGAACCACTAAGCAGAATTCTTCACAACCACGCGAGGCACAGCAACTGAAGGCAATGGGCAAGCTTCCTTCAAACTCAACGTTGACCAAGAGGCCTTCACTTGCCGCCACTGTGAATGATAGTACTACGAGTGGTGCAGGATCTGCAGATGGGCAGGATTCAGTTGGTCTTAGATCTACTACACACAAGCTTTCCCGACTTCCAACTGCCGGCACGAGGGAGCAAAAGACTTCCTCTGAAGTTTCTAAAAGTTCATCTATCAAGGTCGGTAAATCTTCCTCCAAAGATGCAAGGATAAAAACAGATTGTAAGGCTTCACCTTCCTCTGGTAGCACTCAGAAAACACAATCTCGAGTTGCACCTAAGGTCAAGACTCGTATTGGGAATTCTCGTCTCCCTTCCTACTCGATATCTCAAAGTAAGCATTCTTCAGGAATATCATCTGCTAGCTCTAAAAGTGAGTGGTCGACAGAGTCGTCATCAAATTCCACTCATGAACTTCAATCTAATAGCTCAAGAGCCAGCCTTCACTCAATTTCGAGCAAAAGAATCTCCGTAGACAGCGATGCATCTCATGATGGAAGTAACCCTGCTGTTGGATCCCATACTCAAACTACTGGCTCAATAAAGCCTTCGGGCCTTCGATTGCCATCACCTAAAATCGGGTACTTTGATGGGGGGAAAACTTCTATCATGAAATCTAATGTGTCTGTACCTGGTGGCACGACTAGGATTGGAGCTGGAAATGTCAGCGCAATTGGAGGCCAAAATAAGACCAAGCCTTCGAAGCTTCAACCTGTTACAGTGTTGCCCAAGAGCACAACTCGTGCTGTTAGTCAGCCTAATTTGAATTTGAAATCTCATAAAACCACTGCAACTAAGATGTCCAAAACGAATGAACTCGACCAAGAAGTCAAAGAGCTTGGTTGTGATGGATCAAATACTGATATGCATAATTCAGATCGAATACTGATGGAGAACTTAACGGATTACAAAACTTCGGGACCTGATGTTGATGGTATACTTCCATTTCAGAGGATCCTTGAATGTGATAAGAGAATTTGTTCAAGAGGGTTCAATGTAATACCGTGGAAAGAATTCATTACGAAGCCAACTGTATGCTCTTGCAGAAGCTGCGGCCTCAGATATGGATCAAGTGTGTCCGTCTGGGGTTTCTGGTGGAATGTGAAGTTCTGCTGTGCTGCATTTGAGCATCCGATACCAATTACATGGAGACTTATTCGAGTTGGTATCGTCGTGTTCGCTGTGCTTGTGAGCTTTGGGAACAACAGTTTTGAAAGATTGAAGAGGTGTTTGGTTACGTTAGTTTCACACCATGCGGAACCCAGAAATGGTCCTACAATTAAAACCAAGAAGGAAAAAACTACCATGTACAGGCTAATCCAAACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAACAACAGACATCAGTTAAAAGTGAAAGTAGCACAGACCTGTTTCAAACCTGA

Protein sequence

MVNFRVLSDIDYWIFWTMISSPLLRFFQICLMDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVDSNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELTSMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTIGKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQPREAQQLKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTAGTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNSRLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDASHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNVSAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGCDGSNTDMHNSDRILMENLTDYKTSGPDVDGILPFQRILECDKRICSRGFNVIPWKEFITKPTVCSCRSCGLRYGSSVSVWGFWWNVKFCCAAFEHPIPITWRLIRVGIVVFAVLVSFGNNSFERLKRCLVTLVSHHAEPRNGPTIKTKKEKTTMYRLIQTSVKSEQQTSVKSEQQTSVKSEQQTSVKSESSTDLFQT

Homology

[Close]

BLAST of CmoCh06G003490 vs. ExPASy TrEMBL
Match: A0A6J1F781 (uncharacterized protein LOC111441484 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441484 PE=4 SV=1)

HSP 1 Score: 1011.1 bits (2613), Expect = 2.4e-291
Identity = 551/551 (100.00%), Postives = 551/551 (100.00%), Query Frame = 0


Query: 32  MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 91
           MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD
Sbjct: 1   MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 60

Query: 92  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 151
           SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT
Sbjct: 61  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 120

Query: 152 SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 211
           SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI
Sbjct: 121 SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 180

Query: 212 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP 271
           GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP
Sbjct: 181 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP 240

Query: 272 REAQQLKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA 331
           REAQQLKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA
Sbjct: 241 REAQQLKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA 300

Query: 332 GTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS 391
           GTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS
Sbjct: 301 GTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS 360

Query: 392 RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDA 451
           RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDA
Sbjct: 361 RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDA 420

Query: 452 SHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNV 511
           SHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNV
Sbjct: 421 SHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNV 480

Query: 512 SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGC 571
           SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGC
Sbjct: 481 SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGC 540

Query: 572 DGSNTDMHNSD 583
           DGSNTDMHNSD
Sbjct: 541 DGSNTDMHNSD 551

[Close]

BLAST of CmoCh06G003490 vs. ExPASy TrEMBL
Match: A0A6J1F259 (uncharacterized protein LOC111441484 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441484 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 3.2e-288
Identity = 548/551 (99.46%), Postives = 548/551 (99.46%), Query Frame = 0


Query: 32  MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 91
           MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD
Sbjct: 1   MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 60

Query: 92  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 151
           SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT
Sbjct: 61  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 120

Query: 152 SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 211
           SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI
Sbjct: 121 SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 180

Query: 212 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP 271
           GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP
Sbjct: 181 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP 240

Query: 272 REAQQLKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA 331
           REAQ   AMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA
Sbjct: 241 REAQ---AMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA 300

Query: 332 GTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS 391
           GTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS
Sbjct: 301 GTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS 360

Query: 392 RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDA 451
           RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDA
Sbjct: 361 RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDA 420

Query: 452 SHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNV 511
           SHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNV
Sbjct: 421 SHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNV 480

Query: 512 SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGC 571
           SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGC
Sbjct: 481 SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGC 540

Query: 572 DGSNTDMHNSD 583
           DGSNTDMHNSD
Sbjct: 541 DGSNTDMHNSD 548

[Close]

BLAST of CmoCh06G003490 vs. ExPASy TrEMBL
Match: A0A6J1L1F4 (uncharacterized protein LOC111498278 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498278 PE=4 SV=1)

HSP 1 Score: 971.8 bits (2511), Expect = 1.6e-279
Identity = 532/546 (97.44%), Postives = 537/546 (98.35%), Query Frame = 0


Query: 32  MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 91
           MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD
Sbjct: 1   MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 60

Query: 92  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 151
           SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT
Sbjct: 61  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 120

Query: 152 SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 211
           SMIAPVGR+EKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI
Sbjct: 121 SMIAPVGRNEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 180

Query: 212 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP 271
           GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGP RT KQNSSQP
Sbjct: 181 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPGRTPKQNSSQP 240

Query: 272 REAQQLKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA 331
           REAQ+LKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA
Sbjct: 241 REAQKLKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA 300

Query: 332 GTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS 391
           GTREQKTSSEVS SSS KVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS
Sbjct: 301 GTREQKTSSEVSISSSNKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS 360

Query: 392 RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDA 451
           RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSIS KRISVDSD 
Sbjct: 361 RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISGKRISVDSDV 420

Query: 452 SHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNV 511
           SHDGSNPAVG+HTQT GSIKPSGLRLPSPKIGYFDGGKTSI+ SNVSVPGGTT+IGAGNV
Sbjct: 421 SHDGSNPAVGTHTQTIGSIKPSGLRLPSPKIGYFDGGKTSIINSNVSVPGGTTKIGAGNV 480

Query: 512 SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGC 571
           SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKE GC
Sbjct: 481 SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKEPGC 540

Query: 572 DGSNTD 578
           DGSNTD
Sbjct: 541 DGSNTD 546

[Close]

BLAST of CmoCh06G003490 vs. ExPASy TrEMBL
Match: A0A6J1KYE8 (uncharacterized protein LOC111498278 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498278 PE=4 SV=1)

HSP 1 Score: 963.0 bits (2488), Expect = 7.5e-277
Identity = 530/546 (97.07%), Postives = 534/546 (97.80%), Query Frame = 0


Query: 32  MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 91
           MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD
Sbjct: 1   MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 60

Query: 92  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 151
           SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT
Sbjct: 61  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 120

Query: 152 SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 211
           SMIAPVGR+EKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI
Sbjct: 121 SMIAPVGRNEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 180

Query: 212 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP 271
           GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGP RT KQNSSQP
Sbjct: 181 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPGRTPKQNSSQP 240

Query: 272 REAQQLKAMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA 331
           REAQ   AMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA
Sbjct: 241 REAQ---AMGKLPSNSTLTKRPSLAATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTA 300

Query: 332 GTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS 391
           GTREQKTSSEVS SSS KVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS
Sbjct: 301 GTREQKTSSEVSISSSNKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKVKTRIGNS 360

Query: 392 RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDSDA 451
           RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSIS KRISVDSD 
Sbjct: 361 RLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISGKRISVDSDV 420

Query: 452 SHDGSNPAVGSHTQTTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNV 511
           SHDGSNPAVG+HTQT GSIKPSGLRLPSPKIGYFDGGKTSI+ SNVSVPGGTT+IGAGNV
Sbjct: 421 SHDGSNPAVGTHTQTIGSIKPSGLRLPSPKIGYFDGGKTSIINSNVSVPGGTTKIGAGNV 480

Query: 512 SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKELGC 571
           SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKE GC
Sbjct: 481 SAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLKSHKTTATKMSKTNELDQEVKEPGC 540

Query: 572 DGSNTD 578
           DGSNTD
Sbjct: 541 DGSNTD 543

[Close]

BLAST of CmoCh06G003490 vs. ExPASy TrEMBL
Match: A0A6J1CV96 (uncharacterized protein LOC111015105 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015105 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 1.0e-196
Identity = 409/575 (71.13%), Postives = 459/575 (79.83%), Query Frame = 0


Query: 32  MDAVYTDHDRRFSRLSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVD 91
           MD V TD+DRRFSRLSLIDFASEDD L+SSPSCD HD NSL   KEDEEQ+N  +LETVD
Sbjct: 1   MDTVETDNDRRFSRLSLIDFASEDDFLLSSPSCDLHDVNSLVITKEDEEQNNLRQLETVD 60

Query: 92  SNRIEERTDGFEQREDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELT 151
           S+RIE  TD  EQ+EDEPQLLPS +PER  +NGKYNLRKSLAWDSAF T AGFLDPEELT
Sbjct: 61  SSRIEGNTDSLEQKEDEPQLLPSLDPERTRKNGKYNLRKSLAWDSAFFTSAGFLDPEELT 120

Query: 152 SMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI 211
           SMI  VG++EK VLPII EDV KSSDSISTL SEIMPLESIEGNLFEDVRASIQKSSR+I
Sbjct: 121 SMIGQVGKNEKHVLPIILEDVQKSSDSISTLESEIMPLESIEGNLFEDVRASIQKSSRSI 180

Query: 212 GKSNSRIKVESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQP 271
           GK+NSR K ESGRQ   K PS GRLDLTSQ KIKD S SSKQ+DGLQGP RT K+NSSQP
Sbjct: 181 GKANSRSKAESGRQETRKPPSAGRLDLTSQTKIKDRSTSSKQTDGLQGPGRTIKENSSQP 240

Query: 272 REAQQLKAMGKLPSNSTLTKRPSLA----ATVNDSTTSGAGSADGQDSVGLRSTTHKLSR 331
           R  QQL A+ KLP NS LTKRPSL     A VN+ST+SGAG AD +DSV L++TT KL+R
Sbjct: 241 RSRQQLNAVSKLPPNSALTKRPSLGLSRPAIVNNSTSSGAGPADRRDSVALKNTTQKLTR 300

Query: 332 LPTAGTREQKTSSEVSKSSSIKVGKSSSKDARIKTDCKASPSSGSTQKTQSRVAPKV-KT 391
           + TA  REQ+TSSE S SSS KV KSSSKD + KTDCKASPS+G  +KT SRVA +V +T
Sbjct: 301 ISTAAKREQRTSSEGSVSSSDKVVKSSSKDVKKKTDCKASPSAGCIKKTPSRVASRVNET 360

Query: 392 RIGNSRLPSYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRIS 451
             GNS + SY ISQ+KHSSGIS ASS SEWSTESSSNST E +SNSSRASLHSISSKRIS
Sbjct: 361 PTGNSCVASYLISQTKHSSGISPASSISEWSTESSSNSTLEQRSNSSRASLHSISSKRIS 420

Query: 452 VDSDASHDGSNPAVGSHTQTTG-------------------SIKPSGLRLPSPKIGYFDG 511
           +DSD SH+G N +VG HTQTTG                   S+KPSGLRLPSPKIG+FDG
Sbjct: 421 IDSDTSHEGRNHSVGPHTQTTGLLSQSVKKTSSQSSVLPPASMKPSGLRLPSPKIGFFDG 480

Query: 512 GKTSIMKSNVSVPGGTTRIGAGNVSAIGGQNKTKPSKLQPVTVLPKSTTRAVSQPNLNLK 571
           GKTS MKSN++VPGG T+ GAGNVS  GGQNKTKPSKLQPV +LPK+TTRA   P+ N K
Sbjct: 481 GKTSSMKSNLAVPGGVTKSGAGNVSTSGGQNKTKPSKLQPVRLLPKNTTRANIPPSTNSK 540

Query: 572 SHKTTATKMSKTNELDQEVKELGCDGSNTDMHNSD 583
           S+K +ATKMSKTN  D+++KE   +GSNTD+H+SD
Sbjct: 541 SNKPSATKMSKTNG-DRKIKEADREGSNTDLHDSD 574

[Close]

BLAST of CmoCh06G003490 vs. TAIR 10
Match: AT3G53320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 5.2e-28
Identity = 160/532 (30.08%), Postives = 249/532 (46.80%), Query Frame = 0


Query: 46  LSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVDSNRIEERTDGFEQR 105
           L LID A EDD L+ S   +F + +      ++++  NF R      + I       E++
Sbjct: 16  LGLIDVAVEDDSLLFS---EFSETDKDDKCLKEDKDLNFMRDTQYCDDEI--LASSVEEK 75

Query: 106 EDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELTSMIAPVGRHEKRVL 165
           E+  Q   S EPE++ + GKYNLRKSLAWD+ F T AG L+PEEL+SM+    +  K+ L
Sbjct: 76  EEVLQPHESPEPEKVMKKGKYNLRKSLAWDNEFFTSAGVLEPEELSSMMESNHKSGKKAL 135

Query: 166 PIIPEDVLKSSDSISTLGSEIMPLESIEGNLFEDVRASIQKSSRTI-----GKSNSRIKV 225
           P I ED+ +S++SIST  S+     S E  LFEDVRASIQ+S++T      GKSN    V
Sbjct: 136 PTILEDINRSTESISTFQSDCTVENSQEFVLFEDVRASIQRSAKTSDVATPGKSN----V 195

Query: 226 ESGRQGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQPREAQQLKAM 285
                 A+  P+   +D+T+         S +    +QGP + TK    QP   + L   
Sbjct: 196 LRATDVAIS-PTSSTVDVTATQGKTKSKGSPRNPSRVQGPGKATK----QPVATRGLSTS 255

Query: 286 GKLPSNSTLTKRPSLAATVNDSTTSGAGSAD--------GQDSVGLRSTTHKLSR--LPT 345
              P N     RP    + N S+   + +          G++ +G R +  + ++  LP 
Sbjct: 256 ISKPPNGLSKVRPLSTTSTNRSSLDISKTQQEKNSKLPAGKEPLGPRISMSRRAKPVLPK 315

Query: 346 AGT--REQKTSSEVSKS------SSIKVGKSSSKDARIK--TDCKASPSSGSTQKTQSRV 405
            G   +    SS+ SK+      SS++   S+S  A  K   D     +  S++ +   +
Sbjct: 316 PGVPFKSSSRSSDASKNEMTSSCSSLESCASASSSASHKPSIDSIKKKNDSSSRLSSQPL 375

Query: 406 APKVKTR--IGNSRLP---SYSISQSKHSSGISSASSKSEWSTESSSNSTHELQSNSSRA 465
           A +  +R  +G  R+P   +   S+ K SS + +A S S++S+ESS  S     +N ++ 
Sbjct: 376 ANRSTSRGIMGQPRIPPQQTNKTSKPKLSSSVPTAGSISDYSSESSRASETSKMANGNQK 435

Query: 466 SLHS----------------ISSKRISVDSDASHDGSN--PAVGSHTQTTGSIKPSGLRL 525
           ++                   +SK  SV    + +G+    A+      + S KPSGLR+
Sbjct: 436 TVSREKVPANDNTVQTVKPLKNSKDTSVVQADAKEGTKRVSAINGGLVPSASAKPSGLRV 495

Query: 526 PSPKIGYFDGGKTSIMKSNVSVPGGTTRIGAGNVSAIGGQNKTKPSKLQPVT 530
           PSPKIG+FDG +     S     GG T+     +           SK+  V+
Sbjct: 496 PSPKIGFFDGARHGSSSSASKKSGGKTQPARSPIQESTNSKSKASSKVVSVS 533

[Close]

BLAST of CmoCh06G003490 vs. TAIR 10
Match: AT2G37070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes - 556 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 2.2e-10
Identity = 146/548 (26.64%), Postives = 230/548 (41.97%), Query Frame = 0


Query: 46  LSLIDFASEDDLLISSPSCDFHDANSLGFAKEDEEQDNFERLETVDSNRIEERTDGFEQR 105
           LSLIDF++EDD L+ S    F D  +  F+  D+E D    L     N  +E T G    
Sbjct: 18  LSLIDFSAEDDNLLLS---SFLDPTTFDFSDTDKE-DRGLCLFGDTHNCCDEETLGSTTL 77

Query: 106 EDEPQLLPSSEPERIERNGKYNLRKSLAWDSAFLTGAGFLDPEELTSMIAPVGRHEKRVL 165
           E++       EP +I    K NLRKSLAWD AF T AG L+P+EL+SM+       ++ L
Sbjct: 78  EEK-------EPHKIM---KTNLRKSLAWDKAFFTNAGVLEPDELSSMMG------RKSL 137

Query: 166 PIIPEDVLKSSDSISTLGSEIMPLESIE-GNLFEDVRASIQKSSRTIGKSNSRIKVESGR 225
           P + ED+ +S++S+STL S+     ++E G  F    A+     + +G + +   V S  
Sbjct: 138 PAVQEDLHRSTESMSTLKSDC----TVETGQEFFMCDAATPDKRKDLGSTEA---VPSPT 197

Query: 226 QGALKLPSPGRLDLTSQNKIKDGSASSKQSDGLQGPRRTTKQNSSQPREAQQLKAMGKLP 285
              L  PS       +  + + G  S   +   + P  + + N+S  R +     + +  
Sbjct: 198 TSTLDDPSSEEKMKPNPIRKRPGIRSQGLAKATKHPVASEEHNTSISRPS---TGLNRPS 257

Query: 286 SNSTLTKRPSL---AATVNDSTTSGAGSADGQDSVGLRSTTHKLSRLPTAGTREQKTSSE 345
           S  + TKR S+    A    +  S  G       V +      +   P    +    SS 
Sbjct: 258 SGLSKTKRASVDTNKAKQETNPKSSGGKEPLASRVPISRRPRPIVSTPVVPFKSALRSSV 317

Query: 346 VSKSSSIKVGKSSSKDARIKTDCKASPS--SGSTQKTQS-RVAPKVKTRIGNSRLPSYSI 405
            SK+       S      + +     PS  S   +K QS R+A         S   S +I
Sbjct: 318 ASKNELTSSCSSIESCLSVSSTASNKPSIHSVKQKKDQSLRIASHSLANRPKSSAGSRNI 377

Query: 406 SQSK---------HSSGISSASSKSEWSTESSSNSTHELQSNSSRASLHSISSKRISVDS 465
            Q K         +   +S  SS  +WS+ES    T    +  ++ S+H  +       +
Sbjct: 378 DQLKVPPVSAGRTYKFNVSRLSSSVDWSSESPRAFTPNKMAKGNKKSVHGDNGPPTDYTT 437

Query: 466 DASHDGSNPAVGSHTQ-----TTGSIKPSGLRLPSPKIGYFDGGKTSIMKSNVSVPGGTT 525
                 +N    S  Q     +   +KP+GLR+PSPK+GYFDG + S+ ++    P G+ 
Sbjct: 438 QTLKPLNNSKDVSVVQDDPKPSASMMKPTGLRVPSPKVGYFDGARGSVART----PTGSC 497

Query: 526 RIGAGNVSAIGGQNKTKPSKLQP------VTVLPKSTTRAVSQPN--LNLKSHKTTATKM 565
               G VS +       P +  P         + K+  R VS+ +  +   S K T  + 
Sbjct: 498 ---TGPVSGLSKHGACSPDEFTPSRTAKSQPTMSKAAVRPVSRSSRLIVSASPKLTNKRY 528

[Close]

BLAST of CmoCh06G003490 vs. TAIR 10
Match: AT2G38890.1 (unknown protein; Has 58 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.4e-04
Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 125 KYNLRKSLAWDSAFLTGAGFLDPEELTSMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGS 184
           K + R S AWD+AF T  G LD EEL  +      + +         + KS+D+ +T GS
Sbjct: 56  KTDARPSFAWDNAFFTDPGVLDAEELCLVNNGFTSNTQ---------LRKSADTTTTQGS 115

Query: 185 EIMPLESIEGNLFEDVRASIQKS---SRTIGKSNSRIKVESG---RQGALKLPSPGRLDL 244
               + SIE +LF D+RAS++ S    +T+ +   R K+  G    +G  +   P  L L
Sbjct: 116 R-FSVASIEFDLFHDLRASLRNSPNVKQTVTQETHR-KLPDGIKRTKGYKQKVQP--LSL 175

Query: 245 TSQNKIKDGSASS 252
             Q K+   S+SS
Sbjct: 176 IPQPKVSSSSSSS 175

[Close]

BLAST of CmoCh06G003490 vs. TAIR 10
Match: AT2G38890.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 46.2 bits (108), Expect = 1.4e-04
Identity = 44/133 (33.08%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 125 KYNLRKSLAWDSAFLTGAGFLDPEELTSMIAPVGRHEKRVLPIIPEDVLKSSDSISTLGS 184
           K + R S AWD+AF T  G LD EEL  +      + +         + KS+D+ +T GS
Sbjct: 56  KTDARPSFAWDNAFFTDPGVLDAEELCLVNNGFTSNTQ---------LRKSADTTTTQGS 115

Query: 185 EIMPLESIEGNLFEDVRASIQKS---SRTIGKSNSRIKVESG---RQGALKLPSPGRLDL 244
               + SIE +LF D+RAS++ S    +T+ +   R K+  G    +G  +   P  L L
Sbjct: 116 R-FSVASIEFDLFHDLRASLRNSPNVKQTVTQETHR-KLPDGIKRTKGYKQKVQP--LSL 175

Query: 245 TSQNKIKDGSASS 252
             Q K+   S+SS
Sbjct: 176 IPQPKVSSSSSSS 175

The following BLAST results are available for this feature:

BLAST of CmoCh06G003490 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh06G003490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F781	2.4e-291	100.00	uncharacterized protein LOC111441484 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F259	3.2e-288	99.46	uncharacterized protein LOC111441484 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1L1F4	1.6e-279	97.44	uncharacterized protein LOC111498278 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KYE8	7.5e-277	97.07	uncharacterized protein LOC111498278 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CV96	1.0e-196	71.13	uncharacterized protein LOC111015105 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmoCh06G003490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53320.1	5.2e-28	30.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G37070.1	2.2e-10	26.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G38890.1	1.4e-04	33.08	unknown protein; Has 58 Blast hits to 54 proteins in 15 species: Archae - 0; Bac...	[more]
AT2G38890.2	1.4e-04	33.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 732..768
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..479
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..117
None	No IPR available	PANTHER	PTHR33737	OS05G0121800 PROTEIN	coord: 33..733
None	No IPR available	PANTHER	PTHR33737:SF2	OS05G0121800 PROTEIN	coord: 33..733

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G003490.1	CmoCh06G003490.1	mRNA