CmoCh06G003020 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G003020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ankyrin repeat family protein
Location	Cmo_Chr06: 1493447 .. 1494468 (-)
RNA-Seq Expression	CmoCh06G003020
Synteny	CmoCh06G003020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCCAAAATCCAGAGAAAAGAAAAAGAAAAAGTATCTTCTTAAAGCCCACACGACGAAGTTGCCCGCTGCTATGGCGGGCAGGTTCAAATTACGAGGCCATTTTAATTCAATTCATTCATTCATTCACTATCACATGCTCTCTTCCTTCTCATCCACGCCTGCAATTCCCCCACTCATCTCCATCTCCTTGTACGTCCGCCATTGAAGCCTGGTGAGTGAGCTTCGTCTCGAGCTCCTCTCCATGTTCTAGGAGGCCATTTATTTAACTGGAGGTTGCAGAGTGAGGGGGGAATGGGCCAGGGACTGAGCTGCGCGGACCGGCATGGAACTGGAGTCTTCTTCAGAGCTCTGCAGAACGGAGATGTGGAAGTTGTTCGAGCCTTGATGGAGATTGATTCCTCCATCTTACACCAAACAACCAAACATCAAGGACTATCTGCTCTACATGTAGCGGCTGCCAATGGACAGACCGATGTGAGTTTGAGTTGAATTTCAAGAGATTTTCCTTCATTTTTATTCATTGAGTATTTGTTGTTGTAGATTCTTTCGATGCTCTTGGACTGGAATGTGAATCCGGACGTTCTGAATCGGCATAATCAGGTTTTTGTTTCGTTTGATCGAATGTTTGTGTTCAGCTCTTTGGCAGTTCGATTCATCTTTCGATTGAACTGATCCTTGTTTTGGTTGATTTAGACTCCTCTGATGCTGGCTGCGATGAGCGGGAAGATAGCTTGTGTTCAGAGGCTGATCGAAGCAGGAGCTAATGTGCGTTTTTTCAGAAGTTTGTATCTAATTTTGATGCAATTTTGCTTACCGGTGTTTGTTTGACATCCATAGATATTGATGTTTGATTCTACACATCGAAGAACCTGCTTGCATTATGCAGCTTACTATGGGCATTCTGATTGCCTGCAAGCGATTCTCTCTGCTGCGCATACCACCCCTGTATCCGACTCTTGGTTAGTCAATTTACTCTTCTTCTTCAAGCATTTACCTTCGAGTATTGGCTTAATATGA

mRNA sequence

ATGACGCCAAAATCCAGAGAAAAGAAAAAGAAAAAGTATCTTCTTAAAGCCCACACGACGAAGTTGCCCGCTGCTATGGCGGGCAGGTTCAAATTACGAGGCCATTTTAATTCAATTCATTCATTCATTCACTATCACATGCTCTCTTCCTTCTCATCCACGCCTGCAATTCCCCCACTCATCTCCATCTCCTTGTACAGTGAGGGGGGAATGGGCCAGGGACTGAGCTGCGCGGACCGGCATGGAACTGGAGTCTTCTTCAGAGCTCTGCAGAACGGAGATGTGGAAGTTGTTCGAGCCTTGATGGAGATTGATTCCTCCATCTTACACCAAACAACCAAACATCAAGGACTATCTGCTCTACATGTAGCGGCTGCCAATGGACAGACCGATATTCTTTCGATGCTCTTGGACTGGAATGTGAATCCGGACGTTCTGAATCGGCATAATCAGACTCCTCTGATGCTGGCTGCGATGAGCGGGAAGATAGCTTGTGTTCAGAGGCTGATCGAAGCAGGAGCTAATATATTGATGTTTGATTCTACACATCGAAGAACCTGCTTGCATTATGCAGCTTACTATGGGCATTCTGATTGCCTGCAAGCGATTCTCTCTGCTGCGCATACCACCCCTGTATCCGACTCTTGGTTAGTCAATTTACTCTTCTTCTTCAAGCATTTACCTTCGAGTATTGGCTTAATATGA

Coding sequence (CDS)

ATGACGCCAAAATCCAGAGAAAAGAAAAAGAAAAAGTATCTTCTTAAAGCCCACACGACGAAGTTGCCCGCTGCTATGGCGGGCAGGTTCAAATTACGAGGCCATTTTAATTCAATTCATTCATTCATTCACTATCACATGCTCTCTTCCTTCTCATCCACGCCTGCAATTCCCCCACTCATCTCCATCTCCTTGTACAGTGAGGGGGGAATGGGCCAGGGACTGAGCTGCGCGGACCGGCATGGAACTGGAGTCTTCTTCAGAGCTCTGCAGAACGGAGATGTGGAAGTTGTTCGAGCCTTGATGGAGATTGATTCCTCCATCTTACACCAAACAACCAAACATCAAGGACTATCTGCTCTACATGTAGCGGCTGCCAATGGACAGACCGATATTCTTTCGATGCTCTTGGACTGGAATGTGAATCCGGACGTTCTGAATCGGCATAATCAGACTCCTCTGATGCTGGCTGCGATGAGCGGGAAGATAGCTTGTGTTCAGAGGCTGATCGAAGCAGGAGCTAATATATTGATGTTTGATTCTACACATCGAAGAACCTGCTTGCATTATGCAGCTTACTATGGGCATTCTGATTGCCTGCAAGCGATTCTCTCTGCTGCGCATACCACCCCTGTATCCGACTCTTGGTTAGTCAATTTACTCTTCTTCTTCAAGCATTTACCTTCGAGTATTGGCTTAATATGA

Protein sequence

MTPKSREKKKKKYLLKAHTTKLPAAMAGRFKLRGHFNSIHSFIHYHMLSSFSSTPAIPPLISISLYSEGGMGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQTDILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHYAAYYGHSDCLQAILSAAHTTPVSDSWLVNLLFFFKHLPSSIGLI

Homology

[Close]

BLAST of CmoCh06G003020 vs. ExPASy Swiss-Prot
Match: Q65XV2 (E3 ubiquitin-protein ligase XB3 OS=Oryza sativa subsp. japonica OX=39947 GN=XB3 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-45
Identity = 89/146 (60.96%), Postives = 108/146 (73.97%), Query Frame = 0


Query: 71  MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 130
           MG G+SCA       FFRA Q GD++ + AL+  D S+  + T +  LS LH+AAANG+ 
Sbjct: 1   MGHGVSCARTGDEHDFFRAAQLGDLDALAALLAADPSLARRATLYDRLSVLHIAAANGRI 60

Query: 131 DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 190
           ++LSM LD    PD +NRH QTPLMLAAM GKI CV +L++A ANILMFDS H RTCLH+
Sbjct: 61  EVLSMFLDRGAPPDAVNRHKQTPLMLAAMHGKIDCVLKLLQADANILMFDSVHARTCLHH 120

Query: 191 AAYYGHSDCLQAILSAAHTTPVSDSW 217
           AAYYGH DCLQAIL+AA TTPV+DSW
Sbjct: 121 AAYYGHVDCLQAILAAAQTTPVADSW 146

[Close]

BLAST of CmoCh06G003020 vs. ExPASy Swiss-Prot
Match: Q94B55 (Putative E3 ubiquitin-protein ligase XBAT31 OS=Arabidopsis thaliana OX=3702 GN=XBAT31 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.8e-45
Identity = 88/146 (60.27%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 71  MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 130
           MGQ +SC  R   G+ F ++Q GD+  +R +M  + S+L+QTT +   S LHVAAANGQ 
Sbjct: 1   MGQSMSCGSRPEHGI-FASVQCGDIITIRRVMATEPSLLNQTTPYDRHSVLHVAAANGQI 60

Query: 131 DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 190
           +ILS+LL+   NPD+LNRH QTPLMLAAM G+I+CV++L E GANILMFDS +RRTCLHY
Sbjct: 61  EILSLLLERFTNPDLLNRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLHY 120

Query: 191 AAYYGHSDCLQAILSAAHTTPVSDSW 217
           AAYYGH++C+QAILSAA ++PV+  W
Sbjct: 121 AAYYGHANCVQAILSAAQSSPVAVHW 145

[Close]

BLAST of CmoCh06G003020 vs. ExPASy Swiss-Prot
Match: Q94CT7 (Probable E3 ubiquitin-protein ligase XBOS31 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS31 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35
Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 71  MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 130
           MG GLSC+        FRA Q GD+  + AL+  D ++  + T +   +ALH+AAANG+ 
Sbjct: 1   MGHGLSCSRDTDEYDLFRAAQLGDIHALSALLAADPALARRATVYDRFTALHIAAANGRL 60

Query: 131 DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 190
            +LSMLLD + + DVL+R  QTPLM+AAM G   CV RL+  GAN+L FDS   RTCLH+
Sbjct: 61  QVLSMLLDRDGDVDVLSRKKQTPLMVAAMRGNTECVVRLLRGGANVLTFDSPRARTCLHH 120

Query: 191 AAYYGHSDCLQAILSAAHTT--PVSDSW 217
           AAYYGH++CLQAIL AA     PV+ SW
Sbjct: 121 AAYYGHAECLQAILGAAAQAQGPVAASW 148

[Close]

BLAST of CmoCh06G003020 vs. ExPASy Swiss-Prot
Match: Q5F478 (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus OX=9031 GN=ANKRD44 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.8e-14
Identity = 45/140 (32.14%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 76  SCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQTDILSM 135
           S  D+ G      A   G  + +  L+E +S++  ++      S LH+AA NG    L +
Sbjct: 526 SIQDKEGYNTVHYAAAYGHRQCLELLLEKNSNMFEESDSSATKSPLHLAAYNGHHQALEV 585

Query: 136 LLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHYAAYYG 195
           LL   V+ D+ +   +T L LAA  G   CV+ LI  GA++ + D+  +RT LH +   G
Sbjct: 586 LLQSLVDLDIKDEKGRTALDLAAFKGHAECVEALISQGASVTVKDNVTKRTPLHASVING 645

Query: 196 HSDCLQAILSAAHTTPVSDS 216
           H+ CL+ +L  A    V+D+
Sbjct: 646 HTPCLRLLLEVADNPDVTDA 665

[Close]

BLAST of CmoCh06G003020 vs. ExPASy Swiss-Prot
Match: Q5ZLC8 (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Gallus gallus OX=9031 GN=ANKRD52 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.8e-14
Identity = 52/133 (39.10%), Postives = 67/133 (50.38%), Query Frame = 0


Query: 75  LSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQTDILS 134
           L   D  G    + A + G  E V  L    +S L +  K +  + LH AAANG TD L 
Sbjct: 610 LDVRDHKGRTALYLATERGSTECVEVLTSHGASALVKERKRK-WTPLHAAAANGNTDSLH 669

Query: 135 MLLDWNVN---PDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHYA 194
           +L+D        DV++ H QTPLMLA M+G + CV  L+E G+     D    RT LH  
Sbjct: 670 LLIDSGERADITDVMDIHGQTPLMLAIMNGHVDCVHLLLEKGSTADAADK-RGRTALHRG 729

Query: 195 AYYGHSDCLQAIL 205
           A  G  DCL A+L
Sbjct: 730 AVTGCEDCLAALL 740

[Close]

BLAST of CmoCh06G003020 vs. ExPASy TrEMBL
Match: A0A6J1I3N0 (putative E3 ubiquitin-protein ligase XBAT31 OS=Cucurbita maxima OX=3661 GN=LOC111470249 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.4e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 71  MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 130
           MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT
Sbjct: 1   MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 60

Query: 131 DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 190
           DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY
Sbjct: 61  DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 120

Query: 191 AAYYGHSDCLQAILSAAHTTPVSDSW 217
           AAYYGHSDCLQAILSAAHTTPVSDSW
Sbjct: 121 AAYYGHSDCLQAILSAAHTTPVSDSW 146

[Close]

BLAST of CmoCh06G003020 vs. ExPASy TrEMBL
Match: A0A6J1GBC7 (putative E3 ubiquitin-protein ligase XBAT31 OS=Cucurbita moschata OX=3662 GN=LOC111452429 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.4e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 71  MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 130
           MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT
Sbjct: 1   MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 60

Query: 131 DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 190
           DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY
Sbjct: 61  DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 120

Query: 191 AAYYGHSDCLQAILSAAHTTPVSDSW 217
           AAYYGHSDCLQAILSAAHTTPVSDSW
Sbjct: 121 AAYYGHSDCLQAILSAAHTTPVSDSW 146

[Close]

BLAST of CmoCh06G003020 vs. ExPASy TrEMBL
Match: A0A0A0LFK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734290 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.4e-69
Identity = 142/218 (65.14%), Postives = 167/218 (76.61%), Query Frame = 0


Query: 6   REKKKKKYLLKAHTTKLPAAMAGRFKLRGHFNSIHSFIHYHMLSSFSSTPAIPPLISISL 65
           R+K+K++Y    HTTKLPA +AGRFK RGHFN+ +S      L  F+    +  L + S+
Sbjct: 10  RKKEKREYSHITHTTKLPAPLAGRFKFRGHFNT-NSIPSNIALFQFTIPTHLLLLSTASI 69

Query: 66  YSEGG-------MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGL 125
            +  G       MGQGLSC   H TG+FFRAL NGDV+VVRA+++ D S+L+ T  HQ  
Sbjct: 70  EAYPGCRGRGEAMGQGLSCTHSHETGLFFRALHNGDVDVVRAMVDNDPSVLYHTINHQRS 129

Query: 126 SALHVAAANGQTDILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILM 185
           + LH AAANG  DILSMLLD NVNPD+LNRHNQTPLMLAAMSG+IACVQRLIEAGANILM
Sbjct: 130 TPLHAAAANGHIDILSMLLDRNVNPDILNRHNQTPLMLAAMSGRIACVQRLIEAGANILM 189

Query: 186 FDSTHRRTCLHYAAYYGHSDCLQAILSAAHTTPVSDSW 217
           FDS HRRTCLHYA++YGHSDCLQAILSAAH+TPVSDSW
Sbjct: 190 FDSIHRRTCLHYASFYGHSDCLQAILSAAHSTPVSDSW 226

[Close]

BLAST of CmoCh06G003020 vs. ExPASy TrEMBL
Match: A0A5A7TRQ8 (Putative E3 ubiquitin-protein ligase XBAT31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001730 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.3e-62
Identity = 119/146 (81.51%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 71  MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 130
           MGQGLSC  RH TG FFRAL NGDV+V+RA+++ D SILH T  HQ  + LH AAANGQ 
Sbjct: 1   MGQGLSCTHRHETGFFFRALHNGDVDVIRAMVDTDPSILHHTINHQRSTPLHAAAANGQI 60

Query: 131 DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 190
           DILS+LLD NVNPD+LNRHNQTPLMLAAMSG+IACVQRLIEAGANILMFDS HRRTCLHY
Sbjct: 61  DILSILLDRNVNPDILNRHNQTPLMLAAMSGRIACVQRLIEAGANILMFDSIHRRTCLHY 120

Query: 191 AAYYGHSDCLQAILSAAHTTPVSDSW 217
           AA+YGHSDCLQAILSAAHTTPVSDSW
Sbjct: 121 AAFYGHSDCLQAILSAAHTTPVSDSW 146

[Close]

BLAST of CmoCh06G003020 vs. ExPASy TrEMBL
Match: A0A6J1CX01 (putative E3 ubiquitin-protein ligase XBAT31 OS=Momordica charantia OX=3673 GN=LOC111014993 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.8e-62
Identity = 121/146 (82.88%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 71  MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 130
           MGQGLSCADRHG+G FF ALQNG+VEVVRA++E D SILH+TT H+  SALH+AAA+GQ 
Sbjct: 1   MGQGLSCADRHGSG-FFGALQNGEVEVVRAMVETDQSILHRTTNHRRSSALHMAAASGQI 60

Query: 131 DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 190
           DILS+LLD + NPDVLNRHNQTPLMLAAM GKIACV+RLIEAGANILMFDS HRRTCLHY
Sbjct: 61  DILSLLLDRSANPDVLNRHNQTPLMLAAMGGKIACVKRLIEAGANILMFDSIHRRTCLHY 120

Query: 191 AAYYGHSDCLQAILSAAHTTPVSDSW 217
           AA+YGHSDCLQAILSAAH+TPVSDSW
Sbjct: 121 AAHYGHSDCLQAILSAAHSTPVSDSW 145

[Close]

BLAST of CmoCh06G003020 vs. TAIR 10
Match: AT2G28840.1 (XB3 ortholog 1 in Arabidopsis thaliana )

HSP 1 Score: 182.2 bits (461), Expect = 4.9e-46
Identity = 88/146 (60.27%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 71  MGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQT 130
           MGQ +SC  R   G+ F ++Q GD+  +R +M  + S+L+QTT +   S LHVAAANGQ 
Sbjct: 1   MGQSMSCGSRPEHGI-FASVQCGDIITIRRVMATEPSLLNQTTPYDRHSVLHVAAANGQI 60

Query: 131 DILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHY 190
           +ILS+LL+   NPD+LNRH QTPLMLAAM G+I+CV++L E GANILMFDS +RRTCLHY
Sbjct: 61  EILSLLLERFTNPDLLNRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLHY 120

Query: 191 AAYYGHSDCLQAILSAAHTTPVSDSW 217
           AAYYGH++C+QAILSAA ++PV+  W
Sbjct: 121 AAYYGHANCVQAILSAAQSSPVAVHW 145

[Close]

BLAST of CmoCh06G003020 vs. TAIR 10
Match: AT2G28840.2 (XB3 ortholog 1 in Arabidopsis thaliana )

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-30
Identity = 60/85 (70.59%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 132 ILSMLLDWNVNPDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHYA 191
           ILS+LL+   NPD+LNRH QTPLMLAAM G+I+CV++L E GANILMFDS +RRTCLHYA
Sbjct: 47  ILSLLLERFTNPDLLNRHKQTPLMLAAMYGRISCVKKLAEVGANILMFDSVNRRTCLHYA 106

Query: 192 AYYGHSDCLQAILSAAHTTPVSDSW 217
           AYYGH++C+QAILSAA ++PV+  W
Sbjct: 107 AYYGHANCVQAILSAAQSSPVAVHW 131

[Close]

BLAST of CmoCh06G003020 vs. TAIR 10
Match: AT5G57740.1 (XB3 ortholog 2 in Arabidopsis thaliana )

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-11
Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 0


Query: 89  ALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQTDILSMLLDWNVNPDVLNR 148
           A ++GD++  +AL++ +  +   +T     S LH +AA G  +I+S+L++  V+ ++ N 
Sbjct: 23  AARDGDLQEAKALLDYNPRLARYSTFGVRNSPLHYSAAQGHHEIVSLLVESGVDINLRNY 82

Query: 149 HNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHYAAYYGHSDCLQAILS 206
             QT LM A   G    V  LI  GANI   D  +  T LH AA  GH  C++ +LS
Sbjct: 83  RGQTALMQACQHGHWEVVLILILFGANIHRSDYLNGGTALHLAALNGHPRCIRILLS 139

[Close]

BLAST of CmoCh06G003020 vs. TAIR 10
Match: AT3G12360.1 (Ankyrin repeat family protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-11
Identity = 39/125 (31.20%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 82  GTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAANGQTDILSMLLDWNV 141
           G    F A   G ++VV+ L++  S          G   LH+AA  G   I+ +LLD + 
Sbjct: 129 GETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLHIAAIQGHHAIVEVLLDHDA 188

Query: 142 N-PDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRTCLHYAAYYGHSDCL 201
                    N TPL+ AAM G    V +L+    N+L    ++ +  LH AA  GH + +
Sbjct: 189 TLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAARQGHVEVI 248

Query: 202 QAILS 206
           +A+LS
Sbjct: 249 KALLS 253

[Close]

BLAST of CmoCh06G003020 vs. TAIR 10
Match: AT1G07710.1 (Ankyrin repeat family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-09
Identity = 38/140 (27.14%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 68  EGGMGQGLSCADRHGTGVFFRALQNGDVEVVRALMEIDSSILHQTTKHQGLSALHVAAAN 127
           E  + Q L   ++ G    + A + GDVE+V+ ++      L +     G  A H+AA  
Sbjct: 52  ESELNQLLGKQNQSGETALYVAAEYGDVEIVKEMINCYDLALVEIKARNGFDAFHIAAKQ 111

Query: 128 GQTDILSMLLDWNVN-PDVLNRHNQTPLMLAAMSGKIACVQRLIEAGANILMFDSTHRRT 187
           G  D+L +L + +      ++  N T L  AA  G    V  L+E G+++     ++ +T
Sbjct: 112 GDLDVLKVLAEAHSELAMTVDLSNTTALHTAATQGHTEVVNFLLELGSSLAGIAKSNGKT 171

Query: 188 CLHYAAYYGHSDCLQAILSA 207
            LH A+  GH   ++A+L++
Sbjct: 172 ALHSASRNGHVKVIKALLAS 191

The following BLAST results are available for this feature:

BLAST of CmoCh06G003020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q65XV2	1.1e-45	60.96	E3 ubiquitin-protein ligase XB3 OS=Oryza sativa subsp. japonica OX=39947 GN=XB3 ...	[more]
Q94B55	6.8e-45	60.27	Putative E3 ubiquitin-protein ligase XBAT31 OS=Arabidopsis thaliana OX=3702 GN=X...	[more]
Q94CT7	1.3e-35	52.03	Probable E3 ubiquitin-protein ligase XBOS31 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q5F478	4.8e-14	32.14	Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Ga...	[more]
Q5ZLC8	4.8e-14	39.10	Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Ga...	[more]

BLAST of CmoCh06G003020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3N0	6.4e-78	100.00	putative E3 ubiquitin-protein ligase XBAT31 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GBC7	6.4e-78	100.00	putative E3 ubiquitin-protein ligase XBAT31 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0LFK7	2.4e-69	65.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734290 PE=4 SV=1	[more]
A0A5A7TRQ8	1.3e-62	81.51	Putative E3 ubiquitin-protein ligase XBAT31 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1CX01	3.8e-62	82.88	putative E3 ubiquitin-protein ligase XBAT31 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of CmoCh06G003020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28840.1	4.9e-46	60.27	XB3 ortholog 1 in Arabidopsis thaliana	[more]
AT2G28840.2	1.7e-30	70.59	XB3 ortholog 1 in Arabidopsis thaliana	[more]
AT5G57740.1	2.3e-11	35.04	XB3 ortholog 2 in Arabidopsis thaliana	[more]
AT3G12360.1	3.0e-11	31.20	Ankyrin repeat family protein	[more]
AT1G07710.1	1.3e-09	27.14	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 81..110 e-value: 420.0 score: 7.8 coord: 116..145 e-value: 0.026 score: 23.7 coord: 149..178 e-value: 2.3E-4 score: 30.5 coord: 183..212 e-value: 0.025 score: 23.7
IPR002110	Ankyrin repeat	PFAM	PF00023	Ank	coord: 185..205 e-value: 0.012 score: 16.1
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 116..148 score: 11.70115
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 149..181 score: 11.62102
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 87..180 e-value: 2.8E-15 score: 56.7
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 70..221 e-value: 2.1E-32 score: 114.6
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 75..205
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 71..216
None	No IPR available	PANTHER	PTHR24128:SF14	E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED	coord: 71..216
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 116..148 score: 10.338512
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 149..176 score: 10.471169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G003020.1	CmoCh06G003020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006464	cellular protein modification process
molecular_function	GO:0140096	catalytic activity, acting on a protein
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity