CmoCh06G002390 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G002390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor DIVARICATA-like
Location	Cmo_Chr06: 1261574 .. 1263194 (-)
RNA-Seq Expression	CmoCh06G002390
Synteny	CmoCh06G002390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGATTTATAAAGTTTAATTAATTATTTCATTTCTCTGATTTTTTCTCCAATTAAGCTTAAATGTCCCTACAAATTCCATATGCACCAATCAAAATTCGACAGCTTTTACTCAATTTATGTCTCTTTTCATTATGTGCCTTGTTCTTGTCCCATAGATCTCGATCCCACCGGCAGCACCAATCACTGTTTTTCGCCTTCTCAACCTAAATTTTTGTTGTTTAATTTCTTTCTGAAGAAACCCATTTTGTTTTTCGTATGGTTCGATCAAGTTCTTTGGTTGATTTTGGTGGGCTATCTCGAATGTTTTTGGCTCTGTTCTTCCTCTGTTTCAATTTCTTACGATCTGTTTAGTTTTGGATCTAATTGGTGTTGAATTCTTGAAGTTCATGCATTTCTTCAACTGGGTTTTTATGGTTTTTGATTTCTTCCACTGCTATGTGTTTTATTTTTTGAATTGTTCTAAATTGGGTTGATGATACGAGGAATTGGAACTCTGGCTCCGGCGACCGACCGTCGAAGCTCCAGCTGCTCCAACTGGACGGTGGAGGAGAACAAGCGGTTCGAAAATGCTTTGGCTTTGTTTGACAGTGATTCCTCGGACCGGTGGTTGAAAGTCGCCGCCATGATTCCCGGAAAAACCGTCGGCGACGTGATGAAACATTACAGAGAGTTAGTGGCGGATGTGAGTGATATTGAAGCAGGGCTGGTTCCGATTCCGGGGTACGCTACTGGCAACTCTTTTGTGTTGGAATGGTCGAATGACGGCTGTGGGTTTGGGTCGGTTTACGACGGCGCCGGGAAGAGAGGGGTCTCCGGTCGGCCTTCCGATCATGAAAGGAAAAAGGGAGTACCTTGGACCGAAGAAGAACACAGGTTTGATAAACTCATTAATTTCCCTGCTTGAGAAATTTAACTCTAAATTTTGGAAAATGAAATTAAATTTGATATGGATTTTATTTCTATCGTGGTTATTTCACTATTTTAGTTAGTTTCGAGCTCATGTAGTGATAGTTCGATATGACTAAAATTATAGGCAATTCTTGATGGGCCTAAAGAAATACGGTAAAGGAGATTGGCGAAACATTTCTCGTAACTTCGTAACAACAAGAACTCCAACGCAAGTAGCTAGCCACGCCCAGAAGTATTTCATCAGACAACTCACTGGAGGGAAAGACAGAAGAAGATCAAGCATCCATGATATCACCACCGTCAATCTACCCGACAACCTAACTCATCCCAATACTAAGTCACCTTATTCCCCAATTCTATACGACGGCGTGACACCCAATTGTGGGATCTCCTCACTCGGACCTAAGCTATTACAAGACCGAATCTTTGTTGGAGGCAACATCCATGGCTGCGAAAATATTGGTCCTTACAGCCGCAATGTTTTTCAAGTGCAAAGGGAGCAACAATACAAGTGAGGATATGGTTAGAATTTGGGTATTGAATTAATTAGTTTGTATGCTTATATTATTGGTAAATAAATGTGGTAAAGATGTAGTCTTAATTAATGTAATAAACTTAAAATGAATACTGAAGGCAACTATGTTTGGGCTTGGGCCAGGCTACTGGGACTGAAACGCGTACTTGGGTCCAAACACATAAAACTAAAAGC

mRNA sequence

ATTTGATTTATAAAGTTTAATTAATTATTTCATTTCTCTGATTTTTTCTCCAATTAAGCTTAAATGTCCCTACAAATTCCATATGCACCAATCAAAATTCGACAGCTTTTACTCAATTTATGTCTCTTTTCATTATGTGCCTTGTTCTTGTCCCATAGATCTCGATCCCACCGGCAGCACCAATCACTGTTTTTCGCCTTCTCAACCTAAATTTTTGTTGTTTAATTTCTTTCTGAAGAAACCCATTTTGTTTTTCGTATGGTTCGATCAAGTTCTTTGGTTGATTTTGGTGGGCTATCTCGAATGTTTTTGGCTCTGTTCTTCCTCTGTTTCAATTTCTTACGATCTGTTTAGTTTTGGATCTAATTGGTGTTGAATTCTTGAAGTTCATGCATTTCTTCAACTGGGTTTTTATGGTTTTTGATTTCTTCCACTGCTATGTGTTTTATTTTTTGAATTGTTCTAAATTGGGTTGATGATACGAGGAATTGGAACTCTGGCTCCGGCGACCGACCGTCGAAGCTCCAGCTGCTCCAACTGGACGGTGGAGGAGAACAAGCGGTTCGAAAATGCTTTGGCTTTGTTTGACAGTGATTCCTCGGACCGGTGGTTGAAAGTCGCCGCCATGATTCCCGGAAAAACCGTCGGCGACGTGATGAAACATTACAGAGAGTTAGTGGCGGATGTGAGTGATATTGAAGCAGGGCTGGTTCCGATTCCGGGGTACGCTACTGGCAACTCTTTTGTGTTGGAATGGTCGAATGACGGCTGTGGGTTTGGGTCGGTTTACGACGGCGCCGGGAAGAGAGGGGTCTCCGGTCGGCCTTCCGATCATGAAAGGAAAAAGGGAGTACCTTGGACCGAAGAAGAACACAGGCAATTCTTGATGGGCCTAAAGAAATACGGTAAAGGAGATTGGCGAAACATTTCTCGTAACTTCGTAACAACAAGAACTCCAACGCAAGTAGCTAGCCACGCCCAGAAGTATTTCATCAGACAACTCACTGGAGGGAAAGACAGAAGAAGATCAAGCATCCATGATATCACCACCGTCAATCTACCCGACAACCTAACTCATCCCAATACTAAGTCACCTTATTCCCCAATTCTATACGACGGCGTGACACCCAATTGTGGGATCTCCTCACTCGGACCTAAGCTATTACAAGACCGAATCTTTGTTGGAGGCAACATCCATGGCTGCGAAAATATTGGTCCTTACAGCCGCAATGTTTTTCAAGTGCAAAGGGAGCAACAATACAAGTGAGGATATGGTTAGAATTTGGGTATTGAATTAATTAGTTTGTATGCTTATATTATTGGTAAATAAATGTGGTAAAGATGTAGTCTTAATTAATGTAATAAACTTAAAATGAATACTGAAGGCAACTATGTTTGGGCTTGGGCCAGGCTACTGGGACTGAAACGCGTACTTGGGTCCAAACACATAAAACTAAAAGC

Coding sequence (CDS)

ATGATACGAGGAATTGGAACTCTGGCTCCGGCGACCGACCGTCGAAGCTCCAGCTGCTCCAACTGGACGGTGGAGGAGAACAAGCGGTTCGAAAATGCTTTGGCTTTGTTTGACAGTGATTCCTCGGACCGGTGGTTGAAAGTCGCCGCCATGATTCCCGGAAAAACCGTCGGCGACGTGATGAAACATTACAGAGAGTTAGTGGCGGATGTGAGTGATATTGAAGCAGGGCTGGTTCCGATTCCGGGGTACGCTACTGGCAACTCTTTTGTGTTGGAATGGTCGAATGACGGCTGTGGGTTTGGGTCGGTTTACGACGGCGCCGGGAAGAGAGGGGTCTCCGGTCGGCCTTCCGATCATGAAAGGAAAAAGGGAGTACCTTGGACCGAAGAAGAACACAGGCAATTCTTGATGGGCCTAAAGAAATACGGTAAAGGAGATTGGCGAAACATTTCTCGTAACTTCGTAACAACAAGAACTCCAACGCAAGTAGCTAGCCACGCCCAGAAGTATTTCATCAGACAACTCACTGGAGGGAAAGACAGAAGAAGATCAAGCATCCATGATATCACCACCGTCAATCTACCCGACAACCTAACTCATCCCAATACTAAGTCACCTTATTCCCCAATTCTATACGACGGCGTGACACCCAATTGTGGGATCTCCTCACTCGGACCTAAGCTATTACAAGACCGAATCTTTGTTGGAGGCAACATCCATGGCTGCGAAAATATTGGTCCTTACAGCCGCAATGTTTTTCAAGTGCAAAGGGAGCAACAATACAAGTGA

Protein sequence

MIRGIGTLAPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDVMKHYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVTPNCGISSLGPKLLQDRIFVGGNIHGCENIGPYSRNVFQVQREQQYK

Homology

[Close]

BLAST of CmoCh06G002390 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.7e-72
Identity = 136/199 (68.34%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 16  SSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDVMKHYRELVADVSDIE 75
           S S + WT  ENK FENALA+FD ++ +RW +VA  +PGKTVGDVM+ Y+EL  DVS IE
Sbjct: 20  SRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIE 79

Query: 76  AGLVPIPGYATGNSFVLEW-SNDGC-GFGSVYDGAGKRGVSGRPSDHERKKGVPWTEEEH 135
           AG VP+PGY+T + F LEW S  G  GF   Y   G++  SGRPS+ ERKKGVPWTEEEH
Sbjct: 80  AGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKGVPWTEEEH 139

Query: 136 RQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDRRRSSIHDITTV 195
           + FLMGLKKYGKGDWRNISRNFV TRTPTQVASHAQKYFIRQL+GGKD+RR+SIHDITTV
Sbjct: 140 KLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTV 199

Query: 196 NLPDNLT--HPNTKSPYSP 211
           NL DN T    N K P SP
Sbjct: 200 NLSDNQTPSPDNKKPPSSP 218

[Close]

BLAST of CmoCh06G002390 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-45
Identity = 100/197 (50.76%), Postives = 128/197 (64.97%), Query Frame = 0


Query: 17  SSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDVMKHYRELVADVSDIEA 76
           S  S W+ E++  FE ALA    +S +RW K+AA +PGK+V  + +HY  LV DV+ IE+
Sbjct: 7   SDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIES 66

Query: 77  GLVPIPGYATGNSFVLEWSNDGCGFGSVYDG-AGKRGVSGR-PSDHERKKGVPWTEEEHR 136
           G VP+P Y +         ++G       +  AG+   +G+  SD ER+KG+ WTE+EHR
Sbjct: 67  GCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHR 126

Query: 137 QFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDRRRSSIHDITTVN 196
            FL+GL KYGKGDWR+ISRNFV TRTPTQVASHAQKYFIR  +  KDRRRSSIHDIT+V 
Sbjct: 127 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 186

Query: 197 LPDNLTHPNTKSPYSPI 212
             D        +P  PI
Sbjct: 187 NAD------VSTPQGPI 197

[Close]

BLAST of CmoCh06G002390 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.2e-43
Identity = 108/243 (44.44%), Postives = 140/243 (57.61%), Query Frame = 0


Query: 9   APATDRRSSSCSNWTVEENKRFENALALF--------DSDSSDRWLKVAAMIPG-KTVGD 68
           A  T   +++ + WT E++K FENALA           +   D +  +AA +PG ++  +
Sbjct: 5   AATTTTTAAAAAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEE 64

Query: 69  VMKHYRELVADVSDIEAGLVPIPGYA--------TGNSFVLEWSNDG-------CGFGSV 128
           V +HY  LV DV+ I+AG VP+P YA         G       S DG        G G  
Sbjct: 65  VRRHYEALVEDVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGG 124

Query: 129 YDGAGKRGVSGRPSDHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQV 188
           YDG    G S   ++ ER+KG+PWTEEEHR FL+GL K+GKGDWR+ISRNFV +RTPTQV
Sbjct: 125 YDG----GKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQV 184

Query: 189 ASHAQKYFIRQLTGGKDRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVTPNCGISS 228
           ASHAQKYFIR  +  +DRRRSSIHDIT+V   D +         +PI     T N   ++
Sbjct: 185 ASHAQKYFIRLNSMNRDRRRSSIHDITSVTAGDQV----AAQQGAPITGHQATGNPAAAA 239

[Close]

BLAST of CmoCh06G002390 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.2e-43
Identity = 108/243 (44.44%), Postives = 140/243 (57.61%), Query Frame = 0


Query: 9   APATDRRSSSCSNWTVEENKRFENALALF--------DSDSSDRWLKVAAMIPG-KTVGD 68
           A  T   +++ + WT E++K FENALA           +   D +  +AA +PG ++  +
Sbjct: 5   AATTTTTAAAAAAWTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEE 64

Query: 69  VMKHYRELVADVSDIEAGLVPIPGYA--------TGNSFVLEWSNDG-------CGFGSV 128
           V +HY  LV DV+ I+AG VP+P YA         G       S DG        G G  
Sbjct: 65  VRRHYEALVEDVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGG 124

Query: 129 YDGAGKRGVSGRPSDHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQV 188
           YDG    G S   ++ ER+KG+PWTEEEHR FL+GL K+GKGDWR+ISRNFV +RTPTQV
Sbjct: 125 YDG----GKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQV 184

Query: 189 ASHAQKYFIRQLTGGKDRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVTPNCGISS 228
           ASHAQKYFIR  +  +DRRRSSIHDIT+V   D +         +PI     T N   ++
Sbjct: 185 ASHAQKYFIRLNSMNRDRRRSSIHDITSVTAGDQV----AAQQGAPITGHQATGNPAAAA 239

[Close]

BLAST of CmoCh06G002390 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 113 VSGRPSDHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYF 172
           V+G  S  ERKKG PWTEEEHR FL+GL+K GKGDWR ISRN+VTTRTPTQVASHAQKYF
Sbjct: 83  VAGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYF 142

Query: 173 IRQLTGGKDRRRSSIHDITTVNLPD 198
           IRQ    + +RRSS+ D+    + D
Sbjct: 143 IRQSNVSRRKRRSSLFDMVPDEVGD 167

[Close]

BLAST of CmoCh06G002390 vs. ExPASy TrEMBL
Match: A0A6J1GFK7 (transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC111453708 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.2e-153
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MIRGIGTLAPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV 60
           MIRGIGTLAPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV
Sbjct: 1   MIRGIGTLAPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV 60

Query: 61  MKHYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDH 120
           MKHYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDH
Sbjct: 61  MKHYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDH 120

Query: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK 180
           ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK
Sbjct: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK 180

Query: 181 DRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVTPNCGISSLGPKLLQDRIFVGGNI 240
           DRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVTPNCGISSLGPKLLQDRIFVGGNI
Sbjct: 181 DRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVTPNCGISSLGPKLLQDRIFVGGNI 240

Query: 241 HGCENIGPYSRNVFQVQREQQYK 264
           HGCENIGPYSRNVFQVQREQQYK
Sbjct: 241 HGCENIGPYSRNVFQVQREQQYK 263

[Close]

BLAST of CmoCh06G002390 vs. ExPASy TrEMBL
Match: A0A6J1I5P4 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111470144 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 252/263 (95.82%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MIRGIGTLAPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV 60
           M RGIG L+PATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV
Sbjct: 1   MKRGIGILSPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV 60

Query: 61  MKHYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDH 120
           M  YRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVY GAGKRGVSGRPSDH
Sbjct: 61  MNQYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYGGAGKRGVSGRPSDH 120

Query: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK 180
           ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK
Sbjct: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK 180

Query: 181 DRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVTPNCGISSLGPKLLQDRIFVGGNI 240
           DRRRSSIHDIT VNLPDNLTHPNTKSPYSPI Y+GVTPNCGISSLGPKLLQDRIFVGGNI
Sbjct: 181 DRRRSSIHDITIVNLPDNLTHPNTKSPYSPIPYNGVTPNCGISSLGPKLLQDRIFVGGNI 240

Query: 241 HGCENIGPYSRNVFQVQREQQYK 264
           HGC+NIGPYS NVFQVQREQQYK
Sbjct: 241 HGCQNIGPYSPNVFQVQREQQYK 263

[Close]

BLAST of CmoCh06G002390 vs. ExPASy TrEMBL
Match: A0A5A7TKX4 (Transcription factor DIVARICATA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001010 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.8e-109
Identity = 204/266 (76.69%), Postives = 219/266 (82.33%), Query Frame = 0


Query: 1   MIRGIGTLAPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV 60
           M RGIG L+PAT  R+S CS WT EENKRFENALALFD D+ DRW+KVAAMIPGKTVGDV
Sbjct: 1   MKRGIGILSPATYLRNSGCSKWTPEENKRFENALALFDRDTPDRWVKVAAMIPGKTVGDV 60

Query: 61  MKHYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDH 120
           +K YRELV DVSDIEAGLVP+PGY  GNSFVLEWSNDG  F  +Y GAGKRG S R SD 
Sbjct: 61  VKQYRELVEDVSDIEAGLVPVPGYGVGNSFVLEWSNDGGEFAPMYIGAGKRGGSVRASDQ 120

Query: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK 180
           ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISR+FVTTRTPTQVASHAQKYFIRQLTGGK
Sbjct: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRSFVTTRTPTQVASHAQKYFIRQLTGGK 180

Query: 181 DRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVT--PNCGISSLGPKLLQDRIFV-G 240
           D+RRSSIHDITT +L DN   PN     SP  Y  VT  P CGISSL PKLLQD+IF+  
Sbjct: 181 DKRRSSIHDITTTHLFDNPIQPN-HDKISPPSYIEVTMAPLCGISSLRPKLLQDQIFLRS 240

Query: 241 GNIHGCENIGPYSRNVFQVQREQQYK 264
            N HGC+N+ PYS N FQVQREQQY+
Sbjct: 241 NNFHGCQNVSPYSPNAFQVQREQQYQ 265

[Close]

BLAST of CmoCh06G002390 vs. ExPASy TrEMBL
Match: A0A1S3B587 (transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103486321 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.8e-109
Identity = 204/266 (76.69%), Postives = 219/266 (82.33%), Query Frame = 0


Query: 1   MIRGIGTLAPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV 60
           M RGIG L+PAT  R+S CS WT EENKRFENALALFD D+ DRW+KVAAMIPGKTVGDV
Sbjct: 1   MKRGIGILSPATYLRNSGCSKWTPEENKRFENALALFDRDTPDRWVKVAAMIPGKTVGDV 60

Query: 61  MKHYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDH 120
           +K YRELV DVSDIEAGLVP+PGY  GNSFVLEWSNDG  F  +Y GAGKRG S R SD 
Sbjct: 61  VKQYRELVEDVSDIEAGLVPVPGYGVGNSFVLEWSNDGGEFAPMYIGAGKRGGSVRASDQ 120

Query: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK 180
           ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISR+FVTTRTPTQVASHAQKYFIRQLTGGK
Sbjct: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRSFVTTRTPTQVASHAQKYFIRQLTGGK 180

Query: 181 DRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVT--PNCGISSLGPKLLQDRIFV-G 240
           D+RRSSIHDITT +L DN   PN     SP  Y  VT  P CGISSL PKLLQD+IF+  
Sbjct: 181 DKRRSSIHDITTTHLFDNPIQPN-HDKISPPSYIEVTMAPLCGISSLRPKLLQDQIFLRS 240

Query: 241 GNIHGCENIGPYSRNVFQVQREQQYK 264
            N HGC+N+ PYS N FQVQREQQY+
Sbjct: 241 NNFHGCQNVSPYSPNAFQVQREQQYQ 265

[Close]

BLAST of CmoCh06G002390 vs. ExPASy TrEMBL
Match: A0A0A0L9Y9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732480 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.5e-107
Identity = 202/268 (75.37%), Postives = 220/268 (82.09%), Query Frame = 0


Query: 1   MIRGIGTLAPATDRRSSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDV 60
           M RGIG L+PAT  R+S CS WT EENKRFENALALFD D+ DRW+KVAAMIPGKTV DV
Sbjct: 1   MKRGIGILSPATYLRNSGCSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVCDV 60

Query: 61  MKHYRELVADVSDIEAGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDH 120
           +K YRELV DVSDIEAGLVP+PGY  GNSFVLEWS+DG GF  +Y GAGKRG  GRPSD 
Sbjct: 61  VKQYRELVEDVSDIEAGLVPVPGYGVGNSFVLEWSSDGGGFAPMYIGAGKRGGCGRPSDQ 120

Query: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGK 180
           ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISR+FVTTRTPTQVASHAQKYFIRQLTGGK
Sbjct: 121 ERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRSFVTTRTPTQVASHAQKYFIRQLTGGK 180

Query: 181 DRRRSSIHDITTVNLPDN-LTHPNTKSPYSPILYDGV--TPNCGISSLGPKLLQDRIFV- 240
           D+RRSSIHDITT +L DN +  P      SP  Y GV   P CGISSL PKLLQD+IF+ 
Sbjct: 181 DKRRSSIHDITTTHLFDNSINQPGNHDKTSPPSYVGVKMAPLCGISSLRPKLLQDQIFLR 240

Query: 241 GGNIHGCENIGPYSRN-VFQVQREQQYK 264
             N HGC+N+ PYS N VFQ QR+QQY+
Sbjct: 241 SNNFHGCQNVNPYSPNIVFQGQRDQQYQ 268

[Close]

BLAST of CmoCh06G002390 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-77
Identity = 154/272 (56.62%), Postives = 187/272 (68.75%), Query Frame = 0


Query: 1   MIRGIGTLAPATDRRSSSC-------SNWTVEENKRFENALALFDSDSSDRWLKVAAMIP 60
           M RGI  ++PAT   +S+        + WT EENK+FENALA +D D+ DRW +VAAM+P
Sbjct: 1   MNRGIEVMSPATYLETSNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLP 60

Query: 61  GKTVGDVMKHYRELVADVSDIEAGLVPIPGYATGNSFVLEW-------SNDGCGFGSVYD 120
           GKTVGDV+K YREL  DVSDIEAGL+PIPGYA+ +SF L+W        N+G      Y 
Sbjct: 61  GKTVGDVIKQYRELEEDVSDIEAGLIPIPGYAS-DSFTLDWGGYDGASGNNGFNMNGYYF 120

Query: 121 GA--GKRGVSGRPSDHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQV 180
            A  GKRG + R ++HERKKGVPWTEEEHRQFLMGLKKYGKGDWRNI+RNFVTTRTPTQV
Sbjct: 121 SAAGGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQV 180

Query: 181 ASHAQKYFIRQLTGGKDRRRSSIHDITTVNLPDNLTHPNTKSPYSPILYDGVTPN--CGI 240
           ASHAQKYFIRQ+ GGKD+RRSSIHDITTVN+PD+   P+  +       D  T N  C  
Sbjct: 181 ASHAQKYFIRQVNGGKDKRRSSIHDITTVNIPDS---PDAAAA------DNATANAPCSP 240

Query: 241 SSLGPKLLQDRIFVGGNIHGCENIGPYSRNVF 255
            S+G    +   + G  ++       Y++N F
Sbjct: 241 PSVGGNQRETSEWEGQTLYDETAAAFYNQNAF 262

[Close]

BLAST of CmoCh06G002390 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68
Identity = 126/194 (64.95%), Postives = 148/194 (76.29%), Query Frame = 0


Query: 16  SSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDVMKHYRELVADVSDIE 75
           S   + WT  ENK FENALA++D ++ DRW KVAA+IPGKTV DV++ Y +L ADVS IE
Sbjct: 28  SGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIE 87

Query: 76  AGLVPIPGYATGNSFVLEWS--NDGC-GFGSVYDGAGKRGVSGRPSDHERKKGVPWTEEE 135
           AGL+P+PGY T   F L+W+    GC GF   +    KR  +GR  + ERKKGVPWTEEE
Sbjct: 88  AGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKGVPWTEEE 147

Query: 136 HRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDRRRSSIHDITT 195
           H+ FLMGLKKYGKGDWRNISRNFV TRTPTQVASHAQKYFIRQL+GGKD+RR+SIHDITT
Sbjct: 148 HKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITT 207

Query: 196 VNLPDNLTHPNTKS 207
           VNL +  +    KS
Sbjct: 208 VNLEEEASLETNKS 221

[Close]

BLAST of CmoCh06G002390 vs. TAIR 10
Match: AT5G01200.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 231.5 bits (589), Expect = 7.9e-61
Identity = 123/214 (57.48%), Postives = 146/214 (68.22%), Query Frame = 0


Query: 1   MIRGIGTLAPATDR---RSSSCSNWTVEENKRFENALA-LFDSDSSDRWLKVAAMIPGKT 60
           M RG+   +PA      +    + WT EENKRFE ALA L D D+ + W K+A +IPGKT
Sbjct: 6   MYRGVNMFSPANTNWIFQEVREATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKT 65

Query: 61  VGDVMKHYRELVADVSDIEAGLVPIPGY------ATGNSFVLEWSNDGCGFGSVYDGAGK 120
           V DV+K Y+EL  DVSDIEAGL+PIPGY      A  + +     N   G+   Y   GK
Sbjct: 66  VADVIKRYKELEDDVSDIEAGLIPIPGYGGDASSAANSDYFFGLENSSYGYD--YVVGGK 125

Query: 121 RGVSGRPS-------DHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQ 180
           R              + ERKKGVPWTE+EH +FLMGLKKYGKGDWRNI+++FVTTRTPTQ
Sbjct: 126 RSSPAMTDCFRSPMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQ 185

Query: 181 VASHAQKYFIRQLTGGKDRRRSSIHDITTVNLPD 198
           VASHAQKYF+RQLT GKD+RRSSIHDITTVN+PD
Sbjct: 186 VASHAQKYFLRQLTDGKDKRRSSIHDITTVNIPD 217

[Close]

BLAST of CmoCh06G002390 vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-60
Identity = 118/180 (65.56%), Postives = 133/180 (73.89%), Query Frame = 0


Query: 16  SSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDVMKHYRELVADVSDIE 75
           SSS  +WT EENK FE ALA++  DS DRW KVA+MIPGKTV DVMK Y +L  DV DIE
Sbjct: 27  SSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIE 86

Query: 76  AGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDHERKKGVPWTEEEHRQ 135
           AG VPIPGY   +S  L +  D C          KR    R SD +RKKGVPWTEEEHR+
Sbjct: 87  AGRVPIPGYPAASS-PLGFDTDMC---------RKRPSGARGSDQDRKKGVPWTEEEHRR 146

Query: 136 FLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDRRRSSIHDITTVNL 195
           FL+GL KYGKGDWRNISRNFV ++TPTQVASHAQKY+ RQL+G KD+RR SIHDITT NL
Sbjct: 147 FLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTGNL 196

[Close]

BLAST of CmoCh06G002390 vs. TAIR 10
Match: AT3G11280.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-60
Identity = 118/180 (65.56%), Postives = 133/180 (73.89%), Query Frame = 0


Query: 16  SSSCSNWTVEENKRFENALALFDSDSSDRWLKVAAMIPGKTVGDVMKHYRELVADVSDIE 75
           SSS  +WT EENK FE ALA++  DS DRW KVA+MIPGKTV DVMK Y +L  DV DIE
Sbjct: 27  SSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIE 86

Query: 76  AGLVPIPGYATGNSFVLEWSNDGCGFGSVYDGAGKRGVSGRPSDHERKKGVPWTEEEHRQ 135
           AG VPIPGY   +S  L +  D C          KR    R SD +RKKGVPWTEEEHR+
Sbjct: 87  AGRVPIPGYPAASS-PLGFDTDMC---------RKRPSGARGSDQDRKKGVPWTEEEHRR 146

Query: 136 FLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDRRRSSIHDITTVNL 195
           FL+GL KYGKGDWRNISRNFV ++TPTQVASHAQKY+ RQL+G KD+RR SIHDITT NL
Sbjct: 147 FLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTGNL 196

The following BLAST results are available for this feature:

BLAST of CmoCh06G002390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9H7	5.7e-72	68.34	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q9FNN6	1.5e-45	50.76	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
B8A9B2	3.2e-43	44.44	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	3.2e-43	44.44	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q9LVS0	1.6e-26	67.06	Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1	[more]

BLAST of CmoCh06G002390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFK7	5.2e-153	100.00	transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A6J1I5P4	1.4e-145	95.82	transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111470144...	[more]
A0A5A7TKX4	7.8e-109	76.69	Transcription factor DIVARICATA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3B587	7.8e-109	76.69	transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103486321 PE=...	[more]
A0A0A0L9Y9	1.5e-107	75.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732480 PE=4 SV=1	[more]

BLAST of CmoCh06G002390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38090.1	1.2e-77	56.62	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	1.7e-68	64.95	Homeodomain-like transcriptional regulator	[more]
AT5G01200.1	7.9e-61	57.48	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.1	2.3e-60	65.56	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.2	2.3e-60	65.56	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 124..174 e-value: 2.1E-13 score: 60.5 coord: 18..70 e-value: 1.8E-7 score: 40.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 14..68 score: 6.260491
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 120..172 score: 7.80494
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 21..68 e-value: 1.22796E-7 score: 45.259
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 127..172 e-value: 6.17002E-12 score: 57.2002
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 20..67 e-value: 1.5E-6 score: 28.3 coord: 127..171 e-value: 1.8E-12 score: 47.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 120..176 score: 21.347458
None	No IPR available	GENE3D	1.10.10.60		coord: 13..81 e-value: 4.0E-21 score: 76.6
None	No IPR available	GENE3D	1.10.10.60		coord: 126..176 e-value: 1.2E-17 score: 65.8
None	No IPR available	PANTHER	PTHR44042:SF50	TRANSCRIPTION FACTOR DIVARICATA	coord: 19..198
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 123..175 e-value: 9.5E-18 score: 62.3
IPR043363	Transcription factor DIVARICATA-like	PANTHER	PTHR44042	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 19..198
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 128..176 score: 10.574386
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 122..175
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 20..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G002390.1	CmoCh06G002390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding