CmoCh06G002340 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGGAAATCCAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGATAACCCAACAGTCGTGCTCAAACACGGCGGCGGTGACGACGGCGCTGGAACTTTGAGCTTCGGCCTGAGCAGAGACTCAAGGCACTTGCCGGTGGGATTTCTACAGAGTTTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACCAAAAAATCTTCACGAAAGGTTTCTTCAGCCGCCACTTTTACAAGGTCAAGATCGGTTTCGGATTCCATGGAGTCGCACCGAGCTGAAGCAATCGAAGATTGCATCGAATTCTTAAACCACTCTTCATCTTTGTCCAGATTAAACTCAGTCTCTGGAAGTACTTACTGA ATGACAAGGAAATCCAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGATAACCCAACAGTCGTGCTCAAACACGGCGGCGGTGACGACGGCGCTGGAACTTTGAGCTTCGGCCTGAGCAGAGACTCAAGGCACTTGCCGGTGGGATTTCTACAGAGTTTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACCAAAAAATCTTCACGAAAGGTTTCTTCAGCCGCCACTTTTACAAGGTCAAGATCGGTTTCGGATTCCATGGAGTCGCACCGAGCTGAAGCAATCGAAGATTGCATCGAATTCTTAAACCACTCTTCATCTTTGTCCAGATTAAACTCAGTCTCTGGAAGTACTTACTGA ATGACAAGGAAATCCAGCAAACGGGTCAGCTTCAGTCCTGATGTGAATGATAACCCAACAGTCGTGCTCAAACACGGCGGCGGTGACGACGGCGCTGGAACTTTGAGCTTCGGCCTGAGCAGAGACTCAAGGCACTTGCCGGTGGGATTTCTACAGAGTTTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACCAAAAAATCTTCACGAAAGGTTTCTTCAGCCGCCACTTTTACAAGGTCAAGATCGGTTTCGGATTCCATGGAGTCGCACCGAGCTGAAGCAATCGAAGATTGCATCGAATTCTTAAACCACTCTTCATCTTTGTCCAGATTAAACTCAGTCTCTGGAAGTACTTACTGA MTRKSSKRVSFSPDVNDNPTVVLKHGGGDDGAGTLSFGLSRDSRHLPVGFLQSFKARVSEAIRFVSTKKSSRKVSSAATFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRLNSVSGSTY Homology
BLAST of CmoCh06G002340 vs. ExPASy TrEMBL
Match: A0A6J1H9Z7 (uncharacterized protein LOC111461879 OS=Cucurbita moschata OX=3662 GN=LOC111461879 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 4.2e-57 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of CmoCh06G002340 vs. ExPASy TrEMBL
Match: A0A6J1I1K7 (uncharacterized protein LOC111470059 OS=Cucurbita maxima OX=3661 GN=LOC111470059 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.0e-55 Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of CmoCh06G002340 vs. ExPASy TrEMBL
Match: A0A5D3DNT5 (Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00960 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47 Identity = 107/123 (86.99%), Postives = 115/123 (93.50%), Query Frame = 0
BLAST of CmoCh06G002340 vs. ExPASy TrEMBL
Match: A0A1S3B5Q5 (josephin-like protein OS=Cucumis melo OX=3656 GN=LOC103486317 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.0e-47 Identity = 107/123 (86.99%), Postives = 115/123 (93.50%), Query Frame = 0
BLAST of CmoCh06G002340 vs. ExPASy TrEMBL
Match: A0A0A0LFD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732440 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 8.8e-47 Identity = 107/123 (86.99%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of CmoCh06G002340 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 2.0e-14 Identity = 58/132 (43.94%), Postives = 74/132 (56.06%), Query Frame = 0
BLAST of CmoCh06G002340 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 7.0e-12 Identity = 60/147 (40.82%), Postives = 77/147 (52.38%), Query Frame = 0
BLAST of CmoCh06G002340 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related ) HSP 1 Score: 43.1 bits (100), Expect = 1.8e-04 Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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