CmoCh06G001850 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G001850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein kinase superfamily protein
Location	Cmo_Chr06: 1005905 .. 1006404 (-)
RNA-Seq Expression	CmoCh06G001850
Synteny	CmoCh06G001850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTTCTCTTGTCGATTTTGCCTAACTATGCTCCTCGTCTGTACTTTTTCACGTGTTTGTATGTAATTTATCATTGTTTCCAAACTCGAACGGGGATTTTCTATGTTTCAATTCTGTGGCTGTTTTACTGTGGTCTGAGCATGTAACCAGTAACAATCTACAAAGCTTTTCAATTTAGAACAAATAGGCATATATATCGGTTCTCTTAATATGTCATATTACTTACGATGTAGACAATTTGTTGCTTACGGCAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGCCTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGGTGTTTTTCTTTGAACTCTTTGTTAATGAAACCAAGTGCATTACCCATAATATTGCTATTCGAAAGATCAAAGTTTTAGGTCTAATTATTGGCATTTCATTGTTATTGTTAAGTTGTAAGAACTTTATGCATCTTTAA

mRNA sequence

ATGAAGGTTCTCTTGTCGATTTTGCCTAACTATGCTCCTCGTCTGTACTTTTTCACGTGTTTGTATGTAATTTATCATTGTTTCCAAACTCGAACGGGGATTTTCTATGTTTCAATTCTGTGGCTGTTTTACTGTGACAATTTGTTGCTTACGGCAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGCCTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGGTGTTTTTCTTTGAACTCTTTGTTAATGAAACCAAGTGCATTACCCATAATATTGCTATTCGAAAGATCAAAGTTTTAGGTCTAATTATTGGCATTTCATTGTTATTGTTAAGTTGTAAGAACTTTATGCATCTTTAA

Coding sequence (CDS)

ATGAAGGTTCTCTTGTCGATTTTGCCTAACTATGCTCCTCGTCTGTACTTTTTCACGTGTTTGTATGTAATTTATCATTGTTTCCAAACTCGAACGGGGATTTTCTATGTTTCAATTCTGTGGCTGTTTTACTGTGACAATTTGTTGCTTACGGCAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGCCTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGGTGTTTTTCTTTGAACTCTTTGTTAATGAAACCAAGTGCATTACCCATAATATTGCTATTCGAAAGATCAAAGTTTTAGGTCTAATTATTGGCATTTCATTGTTATTGTTAAGTTGTAAGAACTTTATGCATCTTTAA

Protein sequence

MKVLLSILPNYAPRLYFFTCLYVIYHCFQTRTGIFYVSILWLFYCDNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVFFFELFVNETKCITHNIAIRKIKVLGLIIGISLLLLSCKNFMHL

Homology

[Close]

BLAST of CmoCh06G001850 vs. ExPASy Swiss-Prot
Match: Q9ZQ31 (Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVFFFELFVNETKCITHNI 105
           DNLL++A+ +S+K+ADFG+AR E  TE MT ETGTYRWMAPE+     +  +    +  I
Sbjct: 260 DNLLISAD-KSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRAYNQKVDVYSFGI 319

Query: 106 AIRKIKVLGLI 117
            + ++ + GL+
Sbjct: 320 VLWEL-ITGLL 328

[Close]

BLAST of CmoCh06G001850 vs. ExPASy Swiss-Prot
Match: F4JTP5 (Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 29/61 (47.54%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 47  NLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVFFFELFVNETKCITHNIA 106
           NLL+  N+  VK+ADFG+AR ++ T +MTAETGTYRWMAPEV   + + ++    ++ I 
Sbjct: 416 NLLMDENE-VVKVADFGVARVKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADVFSYGIV 475

Query: 107 I 108
           +
Sbjct: 476 L 475

[Close]

BLAST of CmoCh06G001850 vs. ExPASy Swiss-Prot
Match: Q8RWL6 (Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 49  LLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEV 89
           LL      VK+ADFG+AR ++ + +MTAETGTYRWMAPEV
Sbjct: 419 LLMDEHEVVKVADFGVARVQTESGVMTAETGTYRWMAPEV 458

[Close]

BLAST of CmoCh06G001850 vs. ExPASy Swiss-Prot
Match: O22558 (Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 6.0e-06
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 49  LLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVFFFELFVNETKCITHNIAI 108
           LL      VK+ADFG+AR +  + +MTAETGTYRWMAPEV   + + ++    ++ I +
Sbjct: 413 LLMDEHGLVKVADFGVARVQIESGVMTAETGTYRWMAPEVIEHKPYNHKADVFSYAIVL 471

[Close]

BLAST of CmoCh06G001850 vs. ExPASy TrEMBL
Match: A0A5B6UEM8 (MACPF domain-containing CAD1-like protein OS=Gossypium australe OX=47621 GN=EPI10_017731 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 9.6e-15
Identity = 46/59 (77.97%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVFFFELFVNETKCITHN 105
           DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEV         TK + +N
Sbjct: 165 DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVSAPTALPKWTKKLVYN 223

[Close]

BLAST of CmoCh06G001850 vs. ExPASy TrEMBL
Match: A0A1U8J4P7 (serine/threonine-protein kinase HT1-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107903661 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVF 90
           DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPE++
Sbjct: 165 DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELY 208

[Close]

BLAST of CmoCh06G001850 vs. ExPASy TrEMBL
Match: A0A6J1I1J9 (serine/threonine-protein kinase HT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470052 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVF 90
           DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPE++
Sbjct: 184 DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELY 227

[Close]

BLAST of CmoCh06G001850 vs. ExPASy TrEMBL
Match: A0A6J1J588 (serine/threonine-protein kinase HT1-like OS=Cucurbita maxima OX=3661 GN=LOC111481423 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVF 90
           DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPE++
Sbjct: 183 DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELY 226

[Close]

BLAST of CmoCh06G001850 vs. ExPASy TrEMBL
Match: A0A0B0NB46 (Serine/threonine-protein kinase HT1 OS=Gossypium arboreum OX=29729 GN=LOC108454933 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVF 90
           DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPE++
Sbjct: 165 DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELY 208

[Close]

BLAST of CmoCh06G001850 vs. TAIR 10
Match: AT5G01850.1 (Protein kinase superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVF 90
           DNLLLT N +SVKLADFGLAREESVTEMMTAETGTYRWMAPE++
Sbjct: 146 DNLLLTENHKSVKLADFGLAREESVTEMMTAETGTYRWMAPELY 189

[Close]

BLAST of CmoCh06G001850 vs. TAIR 10
Match: AT5G50180.1 (Protein kinase superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVF-FFELFVNETKCITHN 105
           +NLLLTA+ ++VKLADFGLAREES+TEMMTAETGTYRWMAPE++    L + E K   H 
Sbjct: 148 ENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRLGEKKHYNHK 207

[Close]

BLAST of CmoCh06G001850 vs. TAIR 10
Match: AT3G27560.1 (Protein kinase superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-15
Identity = 34/44 (77.27%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVF 90
           +NL+L+A+ ++VKLADFGLAREES+TEMMTAETGTYRWMAPE++
Sbjct: 154 ENLILSADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELY 197

[Close]

BLAST of CmoCh06G001850 vs. TAIR 10
Match: AT5G40540.1 (Protein kinase superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14
Identity = 34/44 (77.27%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 46  DNLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVF 90
           ++L+LTA+ ++VKLADFGLAREES+TEMMTAETGTYRWMAPE++
Sbjct: 154 ESLILTADYKTVKLADFGLAREESLTEMMTAETGTYRWMAPELY 197

[Close]

BLAST of CmoCh06G001850 vs. TAIR 10
Match: AT5G66710.1 (Protein kinase superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 3.7e-11
Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 47  NLLLTANQRSVKLADFGLAREESVTEMMTAETGTYRWMAPEVFFFE-LFVNETKCITHNI 106
           N+LLT +Q+ VKLADFGLAREE+    MT E GTYRWMAPE+F ++ L + E K   H +
Sbjct: 201 NMLLTGDQKHVKLADFGLAREET-KGFMTFEAGTYRWMAPELFSYDTLEIGEKKHYDHKV 260

Query: 107 AIRKIKVL 114
            +    ++
Sbjct: 261 DVYSFAIV 267

The following BLAST results are available for this feature:

BLAST of CmoCh06G001850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ31	2.9e-08	45.07	Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 P...	[more]
F4JTP5	1.1e-07	47.54	Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 P...	[more]
Q8RWL6	2.1e-06	62.50	Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 P...	[more]
O22558	6.0e-06	44.07	Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=...	[more]

BLAST of CmoCh06G001850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5B6UEM8	9.6e-15	77.97	MACPF domain-containing CAD1-like protein OS=Gossypium australe OX=47621 GN=EPI1...	[more]
A0A1U8J4P7	2.1e-14	95.45	serine/threonine-protein kinase HT1-like isoform X1 OS=Gossypium hirsutum OX=363...	[more]
A0A6J1I1J9	2.1e-14	95.45	serine/threonine-protein kinase HT1-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1J588	2.1e-14	95.45	serine/threonine-protein kinase HT1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0B0NB46	2.1e-14	95.45	Serine/threonine-protein kinase HT1 OS=Gossypium arboreum OX=29729 GN=LOC1084549...	[more]

BLAST of CmoCh06G001850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01850.1	1.3e-16	88.64	Protein kinase superfamily protein	[more]
AT5G50180.1	1.1e-15	65.57	Protein kinase superfamily protein	[more]
AT3G27560.1	9.5e-15	77.27	Protein kinase superfamily protein	[more]
AT5G40540.1	1.6e-14	77.27	Protein kinase superfamily protein	[more]
AT5G66710.1	3.7e-11	50.00	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 46..89 e-value: 8.3E-9 score: 35.2
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..132 score: 9.757421
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 43..104 e-value: 5.2E-11 score: 44.4
None	No IPR available	PIRSR	PIRSR000620-2	PIRSR000620-2	coord: 50..111 e-value: 0.0057 score: 13.5
None	No IPR available	PANTHER	PTHR23257:SF779	PROTEIN KINASE SUPERFAMILY PROTEIN	coord: 46..94
None	No IPR available	PANTHER	PTHR23257	SERINE-THREONINE PROTEIN KINASE	coord: 46..94
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 13..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G001850.1	CmoCh06G001850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004672	protein kinase activity