
CmoCh06G001000 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCACAGCCAACAAGAAAGATAAGAAAGTTCCTGGTCTTCTTCTTACACTCCTTCCCTCTTTTCCTCTGTGTTTGGTTCCCATAATTACACTCATAATTAGACGCCATGAGAATCAGAAAGCGGCAGCTCCCACTCCCATTAGCCTTCTCCTCTGGCCCTCGCCCTGTCTCGGATCCCCTCCACGCCCACGCTCCTCCAACGGTCAGTAATCCAATACCCATCTCCTCCCTTGGTTTGCTCTTGATTTGGAAGGATTGACCCTCAAATTAAGGCCCACCAGCGCCACAAATGCCTATCTACCACTCATCGCCTCTCTTTCTTTGTGCAGGAGAAGGAACAACAAGAACACATTGAGGATAATACCAGGTAACAAAATTTATTGTTTTTTTTTTTTAAAAGAGGAGCGCAAAGGAAAAACATGGCAAGTGGAACCACTGTTTGGATGTTTTTTTTAATGTGTTTTTCATTGCCTTTTGCCTCTCTATATGTTGTGCGCCCATGGGCTGCATGTTCTTTGCTGGTCCACTGCTCCTCTTTCATCTATTTTCACCTTTTTTTCTTCCTTTTTTGTGCAATTTTTTTGGTTTTTGGTTTGGTTTTAGGGAGAGGTGCGAGTTTGATGCGGAAACTAGCAATGGGGTTGTTCCACAATCCACCTCTTCACCTCAAGGTCTCACCTTTTTCTCATCATCCTACTCTTCTTTGTTCTTGTGTTGTTTGCCTTTCATCATTTGATGCACCAAATCATATCATTATCATTAGTAGATAGTAACTTTAGATCTCATGGAATAATGTAACGAGGGATGGTCTCGACTTATCGTTTAGTAGTGATTTGACTCAGTATCGTGGTGTAAATTCCTACATCTAACTTCGTGGAAACAAGAGCATCTGGGTTATTCTCGACTTATCGTTTAGTAGTGATTTGACATAGTATCGTGGTGTAAAATCCTATCTAACCTCGTGGAATGTTGTCGTCTTCTCCGCAATTGATGTTAAGAGTAACTAGCTTGTTTCCATTATTTCTCCGCAAAGGCTCGACTTGTAGAGAGTAGTATTTCAAATCTATGTCGGAATTAGCCAATGCAAAGATGATCATTGATACTGGGTGTTCGGATAACACAGAGTCTACGGAGATGGTGGATCAGTTAGGGTAAACTATGCAAAAAAAACCCATTGATTTTTATCGGTTTTGTAACAGCTTGGACGAACTGGGGTTCTACAAAAAGTGGTCTAGTATTTCGGGACTTGAGTTATATCGTGATAACTTATAACATTACTCGTTGGAGTACGTTTACTCATCTGGATTTTGTGTTGGCTTATCAAAGTTCTAACTTTTTTAAAAGATTTGTAGTGTCCGTTTTGGTCCGTTCTCGTGAGATCTTATGGGAGACTTCCTCTGATCATGATACATCATCACTTAGCTCATTTGAACATGTGATCGAAAAAATTTATTCGTTCGAACTTGACAATTAAAGCGAACATATCATGAGCTATGAACTTGAGTGATAGCTGAATTGGTTGTTTGTTGTAGTGGTGGGGCGGTGGGGCGAAAGGGAGAGGGAATTTCCATTAAAGAAGAGAAGAAGTGATGATCACAACAACAATGGAAACAAGAAGATGAAGAAGAAACAAGAAGAACATCAATCCAAAATGGGTCTCAACCTCGCCGGAAAAAGGAAATCGAGAGGCGGCGCTTTAATGGAGGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGGTGGCGCTGCTGCCAACAGACCCTCGTTGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGTCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGATCCTCGGCCGCCACCGTCGTCGAGAAAGAAGATAACAAAAAGCCTTCTCCATCACCATCCCCACGGCCACCATTGACATTGACTAGTAAGAAGAGAACGAAGCTCGGTGTAGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCCAACCCGACAGCGTGATGGCGCTGGCACCACCTCCGCCTCTACCTCCTACACCGCCGGATGACAACATTGACGGTAAGAAATTATAATTTACTATTTAATCGATCCTTAATCTTTTAGGTAATTTCGGTTTCGGTCTTTGTTGTATTTTTAAAATTTTCAATTTTTACACGTTGAAAATTTTCAATTAGATTTTTCTTTTTTTAATTTGTTGAGGAAAAGTTGATAATTATTAAATTATGATTTTATTAATATATCTAAAATTTAAGCTCTATTTAATTTTTATTTCTGATTATTTAAAATTTTATTTGTTTTCTCGTTATTTCTTTACAATTAATTTCATCTTTTTGTAATAAAATATTAGAATTCTTGTAAACGACACTAAAATGTCAGTGTCGTGGTCGGACCCACTGATTAAATCCTCGTGATTAAGAAGCTTATTATATATAATTAGTAATTAATGTAGTCAATTAACTCTAACAAAATTAGTTAGTTAATTAATTAACTGAGTTTTGAACATTAATCCCAACCTAAGCATGCGTGGAGTAAAAGCCAAGAACATTCGTTCTATATTATTTAACGCTTCTTTTAAGGATGTTTTTTTTTCCTCCCCCTAATTCAACCCTTAATTCCCATTCAAAAATTTGTATTATTGGATAATGAAGTTGTGAGCCTCACGATTTTAAAACGCGTTGGTTAGAGAAGTTCTACATTCTATAAGAAATGTTTCGTTCTTCTCTCCAACTGATCTAAGATCTCACAATCCACCCTATCGGGGACCTAGTGTCCTCGCTGACACACCACCCCGTGCCTTGTTCTCAACCTACTTGTAATAGTCCAAACTCAACGTTAGTAGATATTGTCGGTTTTGACTCATTACGTATCGCTGTCAGCCTCACGATTTTAAAGGGTATCTAGGAGAGGTTTCCCACACCCCTCAAATGAGTGTTTGTTCCCCTATCCAACCGATATGGGACCTAACAATCCACCCCCTAGAGGGCCAACATCCTTGATGGCACACCGCCTGAAACTTGGCTCGGATATCATTTGTAACAACCCAAACCCCATTGTTAGTAGATATTGTCTGTTTTGGCCCATTACATATTGTTGTCAGCCTCACGATCTTAAAGCGCATTTGCTATGCTATGGAGAGGTTTCCACACCCCTTCTAAGGAATGTTTGTTCTCTTGTCCAACCGATGTGGGACCTAATAATTCACCCCTTAGGGGGCTAACATCCTCGGTGGCACACCGCTCGAAACTTGGCTCGGATATTATTTGTAACAGCCAAAGCCCACTGTTAGTAGACATGGTCTGTTTTGATCCGCTCTCTCTCACCCTTCCCACCATCTCACCCTCCTCCCCTTTCCGACCTACCCTGATGGCTCTTTCCTTTGTAATGCCTGCCGTGTCATTAGCACCGCCTTCTGTTTCTCCTGCATCCTCTACGACATTAACTTTCATGGTGATTGCACCATGTTACCGCAACAACTCAACTCGAGTCTCAATATTGGGGTTACAGTTGCTCATCTTGTAACTGTCATGTTCATACCTATTACGCCACAGCCGAGGCTGAGCCGCCGGTTGGTGGCGTGAGAAATGATTCGTACGTGTAGTTTGCGACGGTTGGGTAGGAGGGTACCGGTGGAGCACCGGCAGCCGTAGAAGAGAGTCCAACGGTGGTGTTGGTGGATCCGATTCTGAAGGCGCAGGCGGAGCTGCATGA TCCACAGCCAACAAGAAAGATAAGAAAGTTCCTGGTCTTCTTCTTACACTCCTTCCCTCTTTTCCTCTGTGTTTGGTTCCCATAATTACACTCATAATTAGACGCCATGAGAATCAGAAAGCGGCAGCTCCCACTCCCATTAGCCTTCTCCTCTGGCCCTCGCCCTGTCTCGGATCCCCTCCACGCCCACGCTCCTCCAACGGAGAAGGAACAACAAGAACACATTGAGGATAATACCAGGGAGAGGTGCGAGTTTGATGCGGAAACTAGCAATGGGGTTGTTCCACAATCCACCTCTTCACCTCAAGTGGTGGGGCGGTGGGGCGAAAGGGAGAGGGAATTTCCATTAAAGAAGAGAAGAAGTGATGATCACAACAACAATGGAAACAAGAAGATGAAGAAGAAACAAGAAGAACATCAATCCAAAATGGGTCTCAACCTCGCCGGAAAAAGGAAATCGAGAGGCGGCGCTTTAATGGAGGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGGTGGCGCTGCTGCCAACAGACCCTCGTTGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGTCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGATCCTCGGCCGCCACCGTCGTCGAGAAAGAAGATAACAAAAAGCCTTCTCCATCACCATCCCCACGGCCACCATTGACATTGACTAGTAAGAAGAGAACGAAGCTCGGTGTAGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCCAACCCGACAGCGTGATGGCGCTGGCACCACCTCCGCCTCTACCTCCTACACCGCCGGATGACAACATTGACGGAGGGTACCGGTGGAGCACCGGCAGCCGTAGAAGAGAGTCCAACGGTGGTGTTGGTGGATCCGATTCTGAAGGCGCAGGCGGAGCTGCATGA ATGAGAATCAGAAAGCGGCAGCTCCCACTCCCATTAGCCTTCTCCTCTGGCCCTCGCCCTGTCTCGGATCCCCTCCACGCCCACGCTCCTCCAACGGAGAAGGAACAACAAGAACACATTGAGGATAATACCAGGGAGAGGTGCGAGTTTGATGCGGAAACTAGCAATGGGGTTGTTCCACAATCCACCTCTTCACCTCAAGTGGTGGGGCGGTGGGGCGAAAGGGAGAGGGAATTTCCATTAAAGAAGAGAAGAAGTGATGATCACAACAACAATGGAAACAAGAAGATGAAGAAGAAACAAGAAGAACATCAATCCAAAATGGGTCTCAACCTCGCCGGAAAAAGGAAATCGAGAGGCGGCGCTTTAATGGAGGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGGTGGCGCTGCTGCCAACAGACCCTCGTTGGTTACTCTCTCTGTGAACATCACTTGGGAAAAGGTCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGATCCTCGGCCGCCACCGTCGTCGAGAAAGAAGATAACAAAAAGCCTTCTCCATCACCATCCCCACGGCCACCATTGACATTGACTAGTAAGAAGAGAACGAAGCTCGGTGTAGTGAAAGCAAGGTCGATAAGCAGCTTGCTCGGCCAACCCGACAGCGTGATGGCGCTGGCACCACCTCCGCCTCTACCTCCTACACCGCCGGATGACAACATTGACGGAGGGTACCGGTGGAGCACCGGCAGCCGTAGAAGAGAGTCCAACGGTGGTGTTGGTGGATCCGATTCTGAAGGCGCAGGCGGAGCTGCATGA MRIRKRQLPLPLAFSSGPRPVSDPLHAHAPPTEKEQQEHIEDNTRERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDSVMALAPPPPLPPTPPDDNIDGGYRWSTGSRRRESNGGVGGSDSEGAGGAA Homology
BLAST of CmoCh06G001000 vs. ExPASy Swiss-Prot
Match: Q6AWY1 (Growth-regulating factor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF8 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04 Identity = 21/57 (36.84%), Postives = 30/57 (52.63%), Query Frame = 0
BLAST of CmoCh06G001000 vs. ExPASy TrEMBL
Match: A0A6J1EQU2 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111436877 PE=3 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.4e-129 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of CmoCh06G001000 vs. ExPASy TrEMBL
Match: A0A6J1EWY8 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111436877 PE=3 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127 Identity = 241/246 (97.97%), Postives = 241/246 (97.97%), Query Frame = 0
BLAST of CmoCh06G001000 vs. ExPASy TrEMBL
Match: A0A6J1I3R9 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111470285 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.7e-103 Identity = 204/220 (92.73%), Postives = 207/220 (94.09%), Query Frame = 0
BLAST of CmoCh06G001000 vs. ExPASy TrEMBL
Match: A0A6J1I679 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111470285 PE=3 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.2e-101 Identity = 204/226 (90.27%), Postives = 207/226 (91.59%), Query Frame = 0
BLAST of CmoCh06G001000 vs. ExPASy TrEMBL
Match: A0A6J1F795 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111441497 PE=3 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60 Identity = 159/303 (52.48%), Postives = 189/303 (62.38%), Query Frame = 0
BLAST of CmoCh06G001000 vs. TAIR 10
Match: AT2G42040.1 (CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 121.7 bits (304), Expect = 9.0e-28 Identity = 109/271 (40.22%), Postives = 134/271 (49.45%), Query Frame = 0
BLAST of CmoCh06G001000 vs. TAIR 10
Match: AT5G53660.1 (growth-regulating factor 7 ) HSP 1 Score: 42.7 bits (99), Expect = 5.3e-04 Identity = 21/65 (32.31%), Postives = 34/65 (52.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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