
CmoCh06G000980 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACTTGCTAGTCTTCAGCCATCGCCACTGTCTCTTTGTTTCCCACCAATTTTGTGTTCTTTCATTCTATTTCACTATTCCAATCCGAGTTTGGAACTCAGAGATTTTCTCGGTTCTCTTTCGGATCTCTCACATTTTAATCCCCAAGTTTCTGTGTGCAATTGGAAGGTTTAATGGTTTTCAGGGATTTGATTTCGTAGCTTTGAAGTTTTGTGTAGGGAGAATCAAATTTCCCTTGTAAACTATGGATAGGATTGGATCCTTCAATCACCATACTGCATCAAATGGTTTCCAGAATTCTTGTAATAGGGATACCGAATTTGGCGCCAATGATAGGAGGTTCGCTTTCTCACGTCAAGCTTCGTCTATGCAATGGCAAGAGCCGTCCCATCCACCGATTTCTACCAACTCCGATGAGTTGGCCAAGCCTTTGCTTTCGCGGAGTATGTCGAGCATAAACATTCCGCCTGGGAGATACTTTTCTTCCGAAAGTAATAACTTCTTTGGTGTAAAGGATAATTCAGGTGATAAATTATCGGTTTTATCACTCGCATTTTCGATTTTAGAGAATGTGAGATCTGGGAATTTGTATATGAAGAGGTTGTTTATTATGATTTTTCTCAATGTCCTGTATTCGACTGCCGAGTTAGCTACTGGTCTCCTTAGTGGCCGTATTGGTATGGAGTCTACGGACGTCACTATCCTTTTACCCCTTTTAAATTCTCATTCTGTATGTTGAAATTTACTCGTTTATGTGAGTAATTTATCTTGTTTTCTTGTGTCTTCAGGCCTGGTTTCTGATGCATTTCATTTGACTTTTGGCTGTGGTCTTTTGACATTTTCATTGTTTTCCATTGCTGCCTCTCGGAGTAAGCCTGATCATGTTTACACTTACGGGTGAGTTTGTTTGTTTGCAATTTTGTTTTGTTTTGGATATCTCACATACTTTTTTACCAGTTTGTCGAACTTTATTTGATTAATAGAGATGGTTAATTGTTGTGATTTCTCTTTCCAGGTACAAGAGACTAGAGGTTTTGGCTGCCTTTACGAATGCTGTAAGTATTCAAAATTTTATACGTGTATGCATTTTTATTGTTCATACCACTCTTCTGTTTGAAGCTCTCCTTTTCTGAGTGATGATTGAGGTTCATGTTCTTTTGATCTTTCAAGTTTATGTATTTGTAGCACTCTCAAGTCTTATGAGTTAATTACCTCGAAAGTTATTTCTTTGTTCTTTTGTTTTCAATAAGAAGTATTTCTGTGCTTTTCACTATTCATAACCGGATATTTCAATGGAACCGAAGCAGTAACCTGATTCTTAAATGGACAACACCTCGAAGGAGCAGAGTGATGTTTCACTTTGAACTTCAGTTTTAGTCTTTTTGATGCTAATTTCCATTCATGGTCACAGTTTATTCTAGCTGTTCTTCTGATTTTTCTAGTTTCCTAACCTCTTGAAGTGATTTTATTTGTTTGCATACATCTTACAAATTATGTAATTTTAATTCACTCTTTTTGCTATCTGGACATTTACTACTCTGTTGCCGTGTAGACAGCTATTTCTTCTGTTTCTGTCTTTCTCGTTAGCAGTGGAAGCGCTCCATGCATATATACAAGATGAATCTGAGCACAAGTAAGTACTTCCCATAAACATTGATTTGGAGATGTAATATAATTGTGGAATGCAATCTAGAAGTTTTTCTCATGTAAATTCTTTGGTTGTAGTCTATTTTGCTGGTTCCTAATTTTCGCTTTTGTACCTTGGATGCCTTGACCTCGATGTCGTGCTTTGTAGGTGTTTCTGTTTTGCAAAGTTTTTGAACTTTTCAGTTGATTGTAATTTTTAGCTGCCAGGATTCATGCCCACAGGACATGCCTGTTAAGTTTATTATGAAAATGTTTTGCATTTTTGTTGCTTGTTTGTGTTCAGTGCGTTAAGATATGCTGGTATCCTAGACTCTTAGATTCAGATACTCTTAGTATATCTATTTATTCTTCACCATTTGGCTGTACGAGCAAGAAAACAGCTTAAATTAAGTCATGCATTTATTGATCCAAAGGGGTTTCATATAACTTATCGAATAATCAACACTTATACTTGCATATGTTTGGCAGAATTTCCCAAGTGATTTTGGATGACAAAGTGTTTTTTCTAAAAGTTGCAATGTTTGGTAACCAATAAAAATCACTTGTAAGAAAGCCAAACTGATTTTAAAATATTTTTTAAAGAAACACTTGAAAGTTGATTATCTCATAACCTAAGCCTATAAATTTGTAGAATGTCAAATTTATAGGCTATTGTTTATCATATCCAGATTTATAGCATAGCATTCTGTAAAAACATAAAGGTGGACTTATTAAATGAGTTTATGTGGTTATGTTTTGTGGTATTAGTACTCTGCATATCTGATAATTATTTTTACCTTGCAGGCACTACTTAATTGTCTCAGCCGTAACAAATTTAACAGTTAATCTTATAGGTGTTTGGTTCTTCAGGAACTATGCTCGCATTAATCTTGGTCAGTCTCCTGTGTTGACATCATCTGATTAGTTATAATGGTTTTTTTCCCCTCTCTAACTTCCATCCATTGTTTTTGAAGTACTTGATCAGTTATGTACTCTCCTAGTCTCCCTTAATTTTATATCGATAACATTTATTCAAGTGTTCGTAAAAAAGTATTTATTTTAGCGTGATTTTGCAATTATATTTTCTAAACAATATTGTTCTCATACTTGCAATAAAGAACTAAATTAGCATATTACCTCATTTTCAAGAGGAAATATTAAATGCAATTATATCTTTAAATCTCAAGTTATACATCTATCAACAGGATTTTTTTATATAACATGTCCATTATATATTCGATAACTATATTGTATTCGACATTTCCCTTCTTAGTATCTTCTTACCAAACATCAATGGTTTCTCAAGTTCATCTATGTCATATCCAAGATGATCTTAATATTTATTGGCTTATCATCCAAGCTGTCAGGTCTGTGATTATGATGATTTTCTCATCCCTGGATTATTGCTTTTAGTGTACAGAAAAGCTGAAGATATGAACTACCATTCAATTTGCTTGCATGTTCTTGCAGATTCTATCCGCAGGTAAATTCTATTCTCCTCCGCTCTCTTTCTTCCTTCATTTCTACATGCCTGCTTTCTCTTTTAATAACCATGTGTGAATATGCTTGCTTTTTCTGAATATTAATCTTATTTTAGCGATGTTTATCTTTAAACAATGTTTGTCATTGGTTCTCAGTGCAGGTCTGATATTGGCGTCATGGTTTTTGTCTCTTGGGTAAACTACCATACACAAACTGATCCTTTCTTTCAAGTTAGTTGCTTCAACTCTAATCTTATTTGGGACCTTCTTTGCAGGGTTCAAAATGCTGAAGTCTTGTGCCTAGGACTGGTTTCGGTTGCAGTCTTTATGATTGTCATGCCGCTCTTTAGAGCAACCGGTGGTGTTTTACTTCAAATGGTACCACCTAGCATTCCAACTTCGGCATTAAGCAAATGTTTGAGACAGGTTTGTGATAAGCATGCATTTTATCATTTGCTCCGGAAGTTGTGAAGTAAATTGGACCATGAAGACTTATTTGAGATCTTTTTCATACTTTTTCATTAAACCGTGAGTTCCATAATTTCTTTTTTGTTCTTCAAACCTTTTTCCATTAACCTTTCTCTGTGCTCGCTAATTCTTTTAAAAATTCTTTTCTCCCATCACATACTTTTTGCCACTTGGAGTCTAGAACCTAGATCAACCCACGGGATTCTCTCAACATTTTTGTACTATGTTTTCCTATGTATTTGTGTTGTCTTTTCTAATTGAAGTTTCTACTTACTTGTTCCTAGAAAAGAAATGTTGAATCTGAACTATATTCAATATACGGGTAATTAAGATTTAAACCCGTATAGTTTGTCTATTTTGCAAACTATATTCTCATGTCTTAAAAAAGGTTGATGACTTACCATATGAATTAATCAAATATCTAATGGAGTTGATATATCTGGCTTATTCTGCGGGTGTCAAGTTCATGAAACCTTAGGGACAGAAAGATATGCTTACATTTTCATAAACCACTAAATGTTTGGAACCTTTTTTAAAACATGGGTATGATTTTCAAATAGACGAACCATAAATGGGAATGGTAAGACACATATGCAAAAGAAATGATCAAATGAAAGTTATGAAATTGACTACACTTGTTATCTACTCTACATGATGTTGCAAGAATGTTCACATTTTTATATTTTATCAGATTACATCCTTGGAAGACGTATTAGAAGTCACTCAAGCGCGATTTTGGGAATTAGTACCCGGTCAAGTTGTTGGCTCACTCTCTCTAACGGTATTGTTAAGCATACTTCTGTCATTGTTAACATTGTCATGCATCTGTACTGTTAGTAATCCTTTTTGTTATGTTGTGATGTAACTGGTAGTTCCTTTCTGTCTATCTGAATTTTCAGTTCTGATATTGGTGAAATCACTGTTTACAGATAAAGAAAGGAACGGACAATCGCCAAACACTTGAATTTGTGCATGGTGTGTATCATGAATTGGGCATTCTGGAGTTAACAGTGCAAATAGAAGATGCTTGAGTTTCTGCTGCTCCATAGTTCTTTTCAGTCCCCCATATCGTCAATGATGGTCATATCTTTAGCTTACACATTCTACCTCAAATTTTCGAGAATCTACATTAGGCTTATGATAAATACCAATTATCTCAAACATGTTCCTCAGTGTTGATGGTAGTTGATAAATAATTTCTCTTCTTTCTCCTCTCTCCCTCAGCACATCCCACATCTTGCATCATAATAGAATTTATGTAAAGTAATTGTAACTTTATTGATAATTATAGTGAAATTTTGTTTAGTATTATGAAAATTGATTACAGGATTATGATTAGTTGTTTTCTTACTTTCTGATGTAATTTCTTGAATTTATAGTTCGGTAGTCTCTGAATTTATAGTTCGGCACGTCTTCAGATCCTCAAGAACATGCTAGTCATTTTGTAGTATCTGCTGGGACAAATATAGGGATAAAGATTGTTGCCATTGCTACCACAAAGAAAACTAAATACAATTCTTTGTTTGAATGTTTTTTAGTATCCTCGAGAATTTGGAGTAGCTTCCATGTACCTTGATTATTTTCCTAGGACAACCGCCTCACCTTTTCACATTTAGTTGCCAGAGTAATTTTATCTTCTGATTTTCATATGATGTGGCTAATACTTTCATAGGTTTCAAGGGAAGGGTGACATCAAAAGCTATGGTGAGGTGTTTATGGGCAGAGGAAGGTCCCAGGTATACAAACTATACATTCATTCATCAACAACACAATGGCTTGTATTAAAGCATAGTAAGAGTATCACTACTCATTGATTCCTTTATGCTATGACTGTTTGATGAGTTTAGAAATCATAGAAGAATGTTGTGATGCAAGGGATCCATAAACTTGTAGTTCTAGGTTTCATGTACCATTACATTGGGCTGCTCAAGGCAA TTACTTGCTAGTCTTCAGCCATCGCCACTGTCTCTTTGTTTCCCACCAATTTTGTGTTCTTTCATTCTATTTCACTATTCCAATCCGAGTTTGGAACTCAGAGATTTTCTCGGTTCTCTTTCGGATCTCTCACATTTTAATCCCCAAGTTTCTGTGTGCAATTGGAAGGTTTAATGGTTTTCAGGGATTTGATTTCGTAGCTTTGAAGTTTTGTGTAGGGAGAATCAAATTTCCCTTGTAAACTATGGATAGGATTGGATCCTTCAATCACCATACTGCATCAAATGGTTTCCAGAATTCTTGTAATAGGGATACCGAATTTGGCGCCAATGATAGGAGGTTCGCTTTCTCACGTCAAGCTTCGTCTATGCAATGGCAAGAGCCGTCCCATCCACCGATTTCTACCAACTCCGATGAGTTGGCCAAGCCTTTGCTTTCGCGGAGTATGTCGAGCATAAACATTCCGCCTGGGAGATACTTTTCTTCCGAAAGTAATAACTTCTTTGGTGTAAAGGATAATTCAGGTGATAAATTATCGGTTTTATCACTCGCATTTTCGATTTTAGAGAATGTGAGATCTGGGAATTTGTATATGAAGAGGTTGTTTATTATGATTTTTCTCAATGTCCTGTATTCGACTGCCGAGTTAGCTACTGGTCTCCTTAGTGGCCGTATTGGCCTGGTTTCTGATGCATTTCATTTGACTTTTGGCTGTGGTCTTTTGACATTTTCATTGTTTTCCATTGCTGCCTCTCGGAGTAAGCCTGATCATGTTTACACTTACGGGTACAAGAGACTAGAGGTTTTGGCTGCCTTTACGAATGCTCTATTTCTTCTGTTTCTGTCTTTCTCGTTAGCAGTGGAAGCGCTCCATGCATATATACAAGATGAATCTGAGCACAAGCACTACTTAATTGTCTCAGCCGTAACAAATTTAACAGTTAATCTTATAGGTGTTTGGTTCTTCAGGAACTATGCTCGCATTAATCTTGTGTACAGAAAAGCTGAAGATATGAACTACCATTCAATTTGCTTGCATGTTCTTGCAGATTCTATCCGCAGTGCAGGTCTGATATTGGCGTCATGGTTTTTGTCTCTTGGGGTTCAAAATGCTGAAGTCTTGTGCCTAGGACTGGTTTCGGTTGCAGTCTTTATGATTGTCATGCCGCTCTTTAGAGCAACCGGTGGTGTTTTACTTCAAATGGTACCACCTAGCATTCCAACTTCGGCATTAAGCAAATGTTTGAGACAGATTACATCCTTGGAAGACGTATTAGAAGTCACTCAAGCGCGATTTTGGGAATTAGTACCCGGTCAAGTTGTTGGCTCACTCTCTCTAACGATAAAGAAAGGAACGGACAATCGCCAAACACTTGAATTTGTGCATGGTGTGTATCATGAATTGGGCATTCTGGAGTTAACAGTGCAAATAGAAGATGCTTGAGTTTCTGCTGCTCCATAGTTCTTTTCAGTCCCCCATATCGTCAATGATGGTTTCAAGGGAAGGGTGACATCAAAAGCTATGGTGAGGTGTTTATGGGCAGAGGAAGGTCCCAGGTATACAAACTATACATTCATTCATCAACAACACAATGGCTTGTATTAAAGCATAGTAAGAGTATCACTACTCATTGATTCCTTTATGCTATGACTGTTTGATGAGTTTAGAAATCATAGAAGAATGTTGTGATGCAAGGGATCCATAAACTTGTAGTTCTAGGTTTCATGTACCATTACATTGGGCTGCTCAAGGCAA ATGGATAGGATTGGATCCTTCAATCACCATACTGCATCAAATGGTTTCCAGAATTCTTGTAATAGGGATACCGAATTTGGCGCCAATGATAGGAGGTTCGCTTTCTCACGTCAAGCTTCGTCTATGCAATGGCAAGAGCCGTCCCATCCACCGATTTCTACCAACTCCGATGAGTTGGCCAAGCCTTTGCTTTCGCGGAGTATGTCGAGCATAAACATTCCGCCTGGGAGATACTTTTCTTCCGAAAGTAATAACTTCTTTGGTGTAAAGGATAATTCAGGTGATAAATTATCGGTTTTATCACTCGCATTTTCGATTTTAGAGAATGTGAGATCTGGGAATTTGTATATGAAGAGGTTGTTTATTATGATTTTTCTCAATGTCCTGTATTCGACTGCCGAGTTAGCTACTGGTCTCCTTAGTGGCCGTATTGGCCTGGTTTCTGATGCATTTCATTTGACTTTTGGCTGTGGTCTTTTGACATTTTCATTGTTTTCCATTGCTGCCTCTCGGAGTAAGCCTGATCATGTTTACACTTACGGGTACAAGAGACTAGAGGTTTTGGCTGCCTTTACGAATGCTCTATTTCTTCTGTTTCTGTCTTTCTCGTTAGCAGTGGAAGCGCTCCATGCATATATACAAGATGAATCTGAGCACAAGCACTACTTAATTGTCTCAGCCGTAACAAATTTAACAGTTAATCTTATAGGTGTTTGGTTCTTCAGGAACTATGCTCGCATTAATCTTGTGTACAGAAAAGCTGAAGATATGAACTACCATTCAATTTGCTTGCATGTTCTTGCAGATTCTATCCGCAGTGCAGGTCTGATATTGGCGTCATGGTTTTTGTCTCTTGGGGTTCAAAATGCTGAAGTCTTGTGCCTAGGACTGGTTTCGGTTGCAGTCTTTATGATTGTCATGCCGCTCTTTAGAGCAACCGGTGGTGTTTTACTTCAAATGGTACCACCTAGCATTCCAACTTCGGCATTAAGCAAATGTTTGAGACAGATTACATCCTTGGAAGACGTATTAGAAGTCACTCAAGCGCGATTTTGGGAATTAGTACCCGGTCAAGTTGTTGGCTCACTCTCTCTAACGATAAAGAAAGGAACGGACAATCGCCAAACACTTGAATTTGTGCATGGTGTGTATCATGAATTGGGCATTCTGGAGTTAACAGTGCAAATAGAAGATGCTTGA MDRIGSFNHHTASNGFQNSCNRDTEFGANDRRFAFSRQASSMQWQEPSHPPISTNSDELAKPLLSRSMSSINIPPGRYFSSESNNFFGVKDNSGDKLSVLSLAFSILENVRSGNLYMKRLFIMIFLNVLYSTAELATGLLSGRIGLVSDAFHLTFGCGLLTFSLFSIAASRSKPDHVYTYGYKRLEVLAAFTNALFLLFLSFSLAVEALHAYIQDESEHKHYLIVSAVTNLTVNLIGVWFFRNYARINLVYRKAEDMNYHSICLHVLADSIRSAGLILASWFLSLGVQNAEVLCLGLVSVAVFMIVMPLFRATGGVLLQMVPPSIPTSALSKCLRQITSLEDVLEVTQARFWELVPGQVVGSLSLTIKKGTDNRQTLEFVHGVYHELGILELTVQIEDA Homology
BLAST of CmoCh06G000980 vs. ExPASy Swiss-Prot
Match: Q6ICY4 (Metal tolerance protein C2 OS=Arabidopsis thaliana OX=3702 GN=MTPC2 PE=2 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 5.1e-141 Identity = 264/398 (66.33%), Postives = 314/398 (78.89%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy Swiss-Prot
Match: Q8NEW0 (Zinc transporter 7 OS=Homo sapiens OX=9606 GN=SLC30A7 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 9.0e-29 Identity = 88/340 (25.88%), Postives = 161/340 (47.35%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy Swiss-Prot
Match: A5PMX1 (Zinc transporter 7 OS=Danio rerio OX=7955 GN=slc30a7 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.5e-28 Identity = 88/351 (25.07%), Postives = 164/351 (46.72%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy Swiss-Prot
Match: Q8TAD4 (Zinc transporter 5 OS=Homo sapiens OX=9606 GN=SLC30A5 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 2.0e-28 Identity = 85/312 (27.24%), Postives = 156/312 (50.00%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy Swiss-Prot
Match: Q9JKN1 (Zinc transporter 7 OS=Mus musculus OX=10090 GN=Slc30a7 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.6e-28 Identity = 87/342 (25.44%), Postives = 161/342 (47.08%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy TrEMBL
Match: A0A6J1EVR2 (metal tolerance protein C2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436293 PE=4 SV=1) HSP 1 Score: 771.5 bits (1991), Expect = 1.7e-219 Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy TrEMBL
Match: A0A6J1EVX5 (metal tolerance protein C2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436293 PE=4 SV=1) HSP 1 Score: 750.4 bits (1936), Expect = 4.0e-213 Identity = 391/399 (97.99%), Postives = 391/399 (97.99%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy TrEMBL
Match: A0A6J1I1Q3 (metal tolerance protein C2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470105 PE=4 SV=1) HSP 1 Score: 741.5 bits (1913), Expect = 1.8e-210 Identity = 386/399 (96.74%), Postives = 389/399 (97.49%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy TrEMBL
Match: A0A6J1I6L2 (metal tolerance protein C2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470105 PE=4 SV=1) HSP 1 Score: 720.3 bits (1858), Expect = 4.4e-204 Identity = 378/399 (94.74%), Postives = 381/399 (95.49%), Query Frame = 0
BLAST of CmoCh06G000980 vs. ExPASy TrEMBL
Match: A0A6J1EPW1 (metal tolerance protein C2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111436293 PE=4 SV=1) HSP 1 Score: 706.4 bits (1822), Expect = 6.6e-200 Identity = 366/367 (99.73%), Postives = 367/367 (100.00%), Query Frame = 0
BLAST of CmoCh06G000980 vs. TAIR 10
Match: AT3G12100.1 (Cation efflux family protein ) HSP 1 Score: 502.3 bits (1292), Expect = 3.6e-142 Identity = 264/398 (66.33%), Postives = 314/398 (78.89%), Query Frame = 0
BLAST of CmoCh06G000980 vs. TAIR 10
Match: AT3G12100.2 (Cation efflux family protein ) HSP 1 Score: 428.7 bits (1101), Expect = 5.1e-120 Identity = 229/340 (67.35%), Postives = 270/340 (79.41%), Query Frame = 0
BLAST of CmoCh06G000980 vs. TAIR 10
Match: AT2G04620.1 (Cation efflux family protein ) HSP 1 Score: 92.4 bits (228), Expect = 8.6e-19 Identity = 82/378 (21.69%), Postives = 145/378 (38.36%), Query Frame = 0
BLAST of CmoCh06G000980 vs. TAIR 10
Match: AT2G29410.1 (metal tolerance protein B1 ) HSP 1 Score: 65.5 bits (158), Expect = 1.1e-10 Identity = 67/321 (20.87%), Postives = 138/321 (42.99%), Query Frame = 0
BLAST of CmoCh06G000980 vs. TAIR 10
Match: AT3G58810.1 (metal tolerance protein A2 ) HSP 1 Score: 65.5 bits (158), Expect = 1.1e-10 Identity = 80/363 (22.04%), Postives = 152/363 (41.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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