CmoCh06G000920 (gene) Cucurbita moschata (Rifu) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAATTCCGCCATTTTTCCAGCCTTTCCGATCAACGTTTACTCAAAACGTGAAGCAAATGAAATGAGCAAATAGCGAAGGAAAATTCTTCGCAGTTCCAAAGTAGCCAAGCTGGGCGAAGAAAAATGGCGGGAAATCCAAAATCCTTTTGAGGAAATGAACAGCGATCTAAGAAATAGAAGAGGCAAAGAGGTACCGATAGATCATAGGGACATTGCTTGCGCTGGAGAATCTTCTGTGAGTCGATTTCCATGGCGAGGAAGAGAACGAACAGAGCACAAGAATTTTACTCTTCGAATCTCAATTGGTGAGGAGGTTATTGTTCTGCTGCTTATAAATTGGCGCAATTTTCAGCCATTTTAATTGTCTAATAAAATTAATTAGAAAATTAATATTACAAAAATTAATTAGAAAATTCTTTGTTTTAATTCCTTTTTCCTTCTCTGAGAAAAGAAACAAATAAACTATTTTAATATATATATATAATCTGCAGAGAGACGCGCGTTCGGCAATTCATTGGCCCAGGCGACACTCTCCGTTGGAGAAATAAGGCCGCAGATTTCTCTCCCATCGCCTCTACACTCTTCTCTTCCTTCAGTCTCTTCGATTCGTCCCGTCCTTCACCGTCGGTTTCTCCCAACTGCGCAGCTTCCTTGGTTTCTGACTCCGGACTGCATTCCACTGGACGCAGACGGATTTGTATAGCTATGGTTCAGCAGGCAGCCCAAGGAGCTCCGGCGATTTATGCTAAGGAGATGGAGAGACTCTCTGCTAAGGAATCGCTGCTGTTGGCTGTGAGTATCGGTGTTTGAGTTTCTTAATGTTTTAAAGTATTGTTGATTTGTTTCGCTTCAACGATCGCGATGATAGTAGAGCATAGTATAGACCGAGAATTATGTATGTATATCGATGATTTTTGTGTTTTGATGTTCATGTTCCTTTACTCCGTGAATTATACGTTTCGTAGTGAAAATTGAAAACATGCTTGATTTAATCGTGTTTTGTTGTCGACAAGCTACTTCGTGT CCAATTCCGCCATTTTTCCAGCCTTTCCGATCAACGTTTACTCAAAACGTGAAGCAAATGAAATGAGCAAATAGCGAAGGAAAATTCTTCGCAGTTCCAAAGTAGCCAAGCTGGGCGAAGAAAAATGGCGGGAAATCCAAAATCCTTTTGAGGAAATGAACAGCGATCTAAGAAATAGAAGAGGCAAAGAGGTACCGATAGATCATAGGGACATTGCTTGCGCTGGAGAATCTTCTGTGAGTCGATTTCCATGGCGAGGAAGAGAACGAACAGAGCACAAGAATTTTACTCTTCGAATCTCAATTGAGAGACGCGCGTTCGGCAATTCATTGGCCCAGGCGACACTCTCCGTTGGAGAAATAAGGCCGCAGATTTCTCTCCCATCGCCTCTACACTCTTCTCTTCCTTCAGTCTCTTCGATTCGTCCCGTCCTTCACCGTCGGTTTCTCCCAACTGCGCAGCTTCCTTGGTTTCTGACTCCGGACTGCATTCCACTGGACGCAGACGGATTTGTATAGCTATGGTTCAGCAGGCAGCCCAAGGAGCTCCGGCGATTTATGCTAAGGAGATGGAGAGACTCTCTGCTAAGGAATCGCTGCTGTTGGCTGTGAGTATCGGTGTTTGAGTTTCTTAATGTTTTAAAGTATTGTTGATTTGTTTCGCTTCAACGATCGCGATGATAGTAGAGCATAGTATAGACCGAGAATTATGTATGTATATCGATGATTTTTGTGTTTTGATGTTCATGTTCCTTTACTCCGTGAATTATACGTTTCGTAGTGAAAATTGAAAACATGCTTGATTTAATCGTGTTTTGTTGTCGACAAGCTACTTCGTGT ATGGTTCAGCAGGCAGCCCAAGGAGCTCCGGCGATTTATGCTAAGGAGATGGAGAGACTCTCTGCTAAGGAATCGCTGCTGTTGGCTGTGAGTATCGGTGTTTGA MVQQAAQGAPAIYAKEMERLSAKESLLLAVSIGV Homology
BLAST of CmoCh06G000920 vs. ExPASy Swiss-Prot
Match: Q8S9M1 (Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP13 PE=1 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 1.5e-04 Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of CmoCh06G000920 vs. ExPASy Swiss-Prot
Match: Q9M2P7 (Probable plastid-lipid-associated protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP9 PE=1 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 4.2e-04 Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of CmoCh06G000920 vs. ExPASy TrEMBL
Match: A0A6J1I3P6 (uncharacterized protein LOC111470266 OS=Cucurbita maxima OX=3661 GN=LOC111470266 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.7e-06 Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of CmoCh06G000920 vs. ExPASy TrEMBL
Match: A0A5D3DPE3 (Putative plastid-lipid-associated protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005440 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.5e-04 Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
BLAST of CmoCh06G000920 vs. ExPASy TrEMBL
Match: A0A0A0LEF9 (PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G807340 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.5e-04 Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
BLAST of CmoCh06G000920 vs. ExPASy TrEMBL
Match: A0A6J1DVL0 (probable plastid-lipid-associated protein 13, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024854 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.5e-04 Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
BLAST of CmoCh06G000920 vs. ExPASy TrEMBL
Match: A0A1S3B757 (probable plastid-lipid-associated protein 13, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486767 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.5e-04 Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
BLAST of CmoCh06G000920 vs. TAIR 10
Match: AT2G42130.1 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.0e-05 Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of CmoCh06G000920 vs. TAIR 10
Match: AT2G42130.4 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.0e-05 Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of CmoCh06G000920 vs. TAIR 10
Match: AT2G42130.2 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.0e-05 Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 0
BLAST of CmoCh06G000920 vs. TAIR 10
Match: AT2G42130.3 (Plastid-lipid associated protein PAP / fibrillin family protein ) HSP 1 Score: 45.1 bits (105), Expect = 1.3e-05 Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of CmoCh06G000920 vs. TAIR 10
Match: AT3G58010.1 (plastoglobulin 34kD ) HSP 1 Score: 43.9 bits (102), Expect = 3.0e-05 Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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