
CmoCh06G000840 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTATGAAGCCTCCGACAGTAGCGGTAAGTTGGAATTATTTGGATTTTGTTGTGTGGGATTGTATAGTTCTTCCGAATGTAATTTGGGGTTTTTGTTCTTTGAGCCCGGTGGGCTCTTTAATTGAGGAATTGAATTTTTTTTTCTCGAGTACAAGTGCCTGATTAGGTGGTTACTTTGACGAGGGCTGGAAAATAGGTTTTCAGTTTTTTTTGGTGTTTTATCGGAAAATTGGGGTTTGAGGTCACTTGGGGCATCCATAGAATGAAGGTTTAATTGCGTTAAGTCCTTTGTTTCTATGAGTTCTGGGATTCTTTTTTGCGTTATTTAGGTTTAATTTTTGCATTTATTCGCGAATTCTTTAAGCGAAAGGACCAGAAAGGGAGATTTTAGGGCATTGTGCTCGATCGTGTTGGATAACTTTTCTTGCTTGATTGGCAAGCCAAGGTGGTCTCTTTGGTTCGTTTTTCTCGAGGGCATAGTGAGGCAGGCTTGAACGAAAAGGAATTGTTGGACCTTCACGCGGAGAAGTTATTCCATTTGGAACTGTGAATGTAATTCCGTAAGGTTAAATTGTTCATCATTAAGGCAGTTTATAGGAGCCCAGAGGATGTTATCAGAATATCACCACTTTAATGGGGAAAATGATGAGTTATTCTAGGTGTAACATCCTTTAAAATCATGTATCCTGTATATGAAATAACTGCAGGTACTGATGATGATCTTCCACCATCACATCGTAACAGAGTTTCTAGAGGAGGACACATTTCTGGAAAGGGGAGGTCTGTTTTGAGTTCTTTTCCATACCCTAGAGTACGCAATATGGAGGCCCAGATTCATCATCTCGAACAAGAAGCTTACTGTTCAGTACTGCGTGCATTTAAAGCCCAAGCAGATGCCATTACCTGGGTCTGTCCATCTTTTTTAAGTTTTGCTAAAAAATATTCCACGTAGTGTTCGTTGTAATATGCTTCTTTGAGGTTTATCTTAAACTTTGTTCGGCAGGATAAAGAAAGCTTGATAACAGAGCTTAGGAAAGAATTGAGAGTATCAGACGACGAACACCGGGAATTGCTTGCGAGGGTTAATTCTGATGATATAATTCGTGAGATTAGGTTAGAATGTTTCTAAAGCAATTGAACTCTTAGAATTTGATATCATTTGGGAGACATGTTTCTTCAACTCAATTGTGTGTTTGTGTTATGTTTTGAGATGGTACTAGGGAGTGGAGACAGGCAGGTGGGAACCTAAATGTGAGACGCAGTTCGTCGCAGCCAATCCATGACGTTGTTCCCAGTCCAACTGTTTCTGCATCCCGTAAGAAGCAGAAAACAAGTCAACTGGTATCAGTACTTTTTCCGGCTTTCATATGTCAATTTTGTACCCTAAATCATGTTTCTTGTTGCATTAAATGTCTCTTCATTACTCTTTTGCCGCAACATATACGACATGGTTGTCTCTATTTTTCTGTTTATTTTGGCTCTCTTCATTTTTTTCTAATAAGAATAATCATTTCATGGTTTTTCATCCATGAAACCGATGCAGCACTCTTCTTCAGTTCCTGCTGGAAGTAGACAGTTAAATAATCATAATTCTTCTGGAGCCCTTCTGGCAAATGAATCTGCTGAAGCTCCACCTTATGACACTTTAATTGGAAGGAAAGTATGGACCAGGTGGCCTGAGGACAACAGCTTCTATGAGGCTCTCATAAAAGACTATGATCCTGTTAAGGCATGTTTGAGTCTCAAAAATTTCCTTTGCCTTGTTTAAGCCTATTTTTTTTGTATAACTGTTTCCTATTTCCAGTCCTCTTAAGAAAGCCCGACAGAAAAAAATGGTCTCTTACTAGTTGCTACATCTTTTCTGCTCCATATTGAATCTGATAAATACCAGCTCTAGTTTCACATGCATGGAACTCTAGCGTTCTCCCTTAGCACCTGTCAATTTCCTTTGTGCTGATTGCCGATTATTCTCTGTACTTACTTTTTTTCAGGGTCAGCATGCCTTGGTTTATGATATAAATACAACACGGGAGACATGGGAATGGGTTGATATTAAAGAGGTATGGTTGGGTATTGCCTTTTCTTGCGCCAAAGAATTTCTCTGCAACTTTTGAGTGAGGTTCTATTTGTTTGAAACTGTGACTGTGTGGGTCTATGGAGTGACCTTTCCAAATTCTGTTGACAAATTTTAGGAAATGCGTGAGAATTCAACAAGATTCAGTACATTCTTTTGAAAATGTCTTTTCTGTAATTTTCAGCAAGTGTTTTCGGGTGCATGAATGATGAAGCATGTTACTGAGACCTCTATGTTAATTATATCCTATTTGCTTTAGGCTTCGTGCACCCTAATTCCTTCTCTTAACCACTTCTTCATACGTGCAAATGCATAAATGATTAATCAAAGTGTGATTTTGGTGACATCTAGTTTGGTTTGCTGGTTCCTCTGCTAATTTGTAGTACTATTAATTCTCTTATCAAAGTTTAGCTTGATTAGCTCAAGAGACCAAAAAAAAAAAAAAGGAAAAACATCGTTCCAACCCATTTTCCATCATTTGATCTTATTTTTAAGTTGGAAGGTTGGCATCCGCAGTTTATTTGGATAACCTGTTGAGACGAAGATTTTAAGTTTTCTTCTTCCCAGAAGCATTTACTCAAGTTCTGGACATTTTTTTATGTAACTTTTAGAAGTTGCTTCGTAGGATGCTATGCTGTTTGCATGAAGATTGCTTTATGGCATGTTTTACATTTTGGTGTGGTTGGGTTGTGAAGCTTGATCTTATGCAATGACTGATGTCCTGCTACCTGCAGATCCCACCCGAGGATATTCGATGGGATAGCGAGGATCCAGGAATGTCTCATCGAGGAGGTCATGGTGGACAAAGCCGTGTTTATCGAAGATCCCAAAGTTTGGGTGGTTTTGCTCCTGGTTCTGGCAGAGGGAGAGGACAGTCAAAAAACCAACCCAGAAAGGAACTTTCTCCATCTCAAAATGGTGTTGGAAAGAAAGTGTTTGACGATATAGAATTACTTAATACAGAAGCATTGGTAAAGGAGGTAAGCATATAGATATTGGAAGTAAATGAATAAACATTCAAACAGTAATATCCAATTGGTGATTTTGAACTCCAACAGGTAGAGAAAGTTTTCAATTCAAGTAATCCCGACCCCGAGGAGCTTGAAAAGGCGAAGAAAATGCTTAAAGTATGGTCCATATCATGCTATTCCAATTCCTTTTTTCTCTGCTCAATCTTTCCTGTTCCACCTTTCCATTCAATTACGAGGTAAATCATTTCATATTCGATGTGCAGGATCACGAGCAGGCTCTTGTGGATGCAATTTCTAGACTAACTTGTGCATCTGATGGTGAAAGTGGTAATAAATATATGTGTACTTAATAATAGTCCCTGCATTTCTGCTGTATATTTCATATCTTTCTCTATTAGGTAGAAAATAATCACTTCAATGTGTTTGTATGAAGAAAGAACCTGGAACAGGTTTCAGTTAGCAATTTTAACTATTTTCTTACCGCTCGTGTGTATTACCCCTCCTTTTCTACAGAATAATTGCAGGAATTTCTTCTCTTTTCATTAATTAGTATCAAAACAAATGAAGATAAATGAAACTTGGATCTTAATCTTAAAGTTACACGACATTTACCAAATTTGTGAAGCTAGTGATTTCATTAAATTTGACATGAGGCGTTGGCTTCTTTTACCAATTCTATTAGCGAAGTGGATGTTCCATATCTAATCATCTTCTTTTAATGCATAGCAGAAGGGGCGCAGCCAAATGTTCATGGCCAATTAGTTGAAAAAAGCAACGATACTTGAGCTACCAAGTGCAAGTGGCAGTGCGAGTGCCATCCCAACAGCATCACATTGCCAAATCTGAATATTGAAATGTCTTACCATTACTGAGTTGTACCAAAAAGTTATTATGTTAGTGGATCAAATTCTTTTGTTTTTTCTTTTCCTTTAATGGGTTTTTTCTTCCAGGTAGGAGGGAGAGTTTGCCTTTCTTATGAATATCTATGGCACTATATGAATAGTAGACAACATCGTGAAAATTTAGCCCTCTGTAGCTTCTAATTGCACTATGGCTTCAATTCCTGCTTCATCAAACTCTGAATTCTTCACTCTTATCTTATGCTGCTGTATCAATATGCAGCTCTGCGTAAACTGTATCGTTGATTCAACGCAACTGCAAGCCGATGGAAACACGAAAGTAAAATGGATCAGAAAAAT ATGAACTATGAAGCCTCCGACAGTAGCGGTACTGATGATGATCTTCCACCATCACATCGTAACAGAGTTTCTAGAGGAGGACACATTTCTGGAAAGGGGAGGTCTGTTTTGAGTTCTTTTCCATACCCTAGAGTACGCAATATGGAGGCCCAGATTCATCATCTCGAACAAGAAGCTTACTGTTCAGTACTGCGTGCATTTAAAGCCCAAGCAGATGCCATTACCTGGGATAAAGAAAGCTTGATAACAGAGCTTAGGAAAGAATTGAGAGTATCAGACGACGAACACCGGGAATTGCTTGCGAGGGTTAATTCTGATGATATAATTCGTGAGATTAGGGAGTGGAGACAGGCAGGTGGGAACCTAAATGTGAGACGCAGTTCGTCGCAGCCAATCCATGACGTTGTTCCCAGTCCAACTGTTTCTGCATCCCGTAAGAAGCAGAAAACAAGTCAACTGCACTCTTCTTCAGTTCCTGCTGGAAGTAGACAGTTAAATAATCATAATTCTTCTGGAGCCCTTCTGGCAAATGAATCTGCTGAAGCTCCACCTTATGACACTTTAATTGGAAGGAAAGTATGGACCAGGTGGCCTGAGGACAACAGCTTCTATGAGGCTCTCATAAAAGACTATGATCCTGTTAAGGGTCAGCATGCCTTGGTTTATGATATAAATACAACACGGGAGACATGGGAATGGGTTGATATTAAAGAGATCCCACCCGAGGATATTCGATGGGATAGCGAGGATCCAGGAATGTCTCATCGAGGAGGTCATGGTGGACAAAGCCGTGTTTATCGAAGATCCCAAAGTTTGGGTGGTTTTGCTCCTGGTTCTGGCAGAGGGAGAGGACAGTCAAAAAACCAACCCAGAAAGGAACTTTCTCCATCTCAAAATGGTGTTGGAAAGAAAGTGTTTGACGATATAGAATTACTTAATACAGAAGCATTGGTAAAGGAGGTAGAGAAAGTTTTCAATTCAAGTAATCCCGACCCCGAGGAGCTTGAAAAGGCGAAGAAAATGCTTAAAGATCACGAGCAGGCTCTTGTGGATGCAATTTCTAGACTAACTTGTGCATCTGATGGTGAAAGTGAAGGGGCGCAGCCAAATGTTCATGGCCAATTAGTTGAAAAAAGCAACGATACTTGAGCTACCAAGTGCAAGTGGCAGTGCGAGTGCCATCCCAACAGCATCACATTGCCAAATCTGAATATTGAAATGTCTTACCATTACTGAGTTGTACCAAAAAGTTATTATGTTAGTGGATCAAATTCTTTTGTTTTTTCTTTTCCTTTAATGGGTTTTTTCTTCCAGGTAGGAGGGAGAGTTTGCCTTTCTTATGAATATCTATGGCACTATATGAATAGTAGACAACATCGTGAAAATTTAGCCCTCTGTAGCTTCTAATTGCACTATGGCTTCAATTCCTGCTTCATCAAACTCTGAATTCTTCACTCTTATCTTATGCTGCTGTATCAATATGCAGCTCTGCGTAAACTGTATCGTTGATTCAACGCAACTGCAAGCCGATGGAAACACGAAAGTAAAATGGATCAGAAAAAT ATGAACTATGAAGCCTCCGACAGTAGCGGTACTGATGATGATCTTCCACCATCACATCGTAACAGAGTTTCTAGAGGAGGACACATTTCTGGAAAGGGGAGGTCTGTTTTGAGTTCTTTTCCATACCCTAGAGTACGCAATATGGAGGCCCAGATTCATCATCTCGAACAAGAAGCTTACTGTTCAGTACTGCGTGCATTTAAAGCCCAAGCAGATGCCATTACCTGGGATAAAGAAAGCTTGATAACAGAGCTTAGGAAAGAATTGAGAGTATCAGACGACGAACACCGGGAATTGCTTGCGAGGGTTAATTCTGATGATATAATTCGTGAGATTAGGGAGTGGAGACAGGCAGGTGGGAACCTAAATGTGAGACGCAGTTCGTCGCAGCCAATCCATGACGTTGTTCCCAGTCCAACTGTTTCTGCATCCCGTAAGAAGCAGAAAACAAGTCAACTGCACTCTTCTTCAGTTCCTGCTGGAAGTAGACAGTTAAATAATCATAATTCTTCTGGAGCCCTTCTGGCAAATGAATCTGCTGAAGCTCCACCTTATGACACTTTAATTGGAAGGAAAGTATGGACCAGGTGGCCTGAGGACAACAGCTTCTATGAGGCTCTCATAAAAGACTATGATCCTGTTAAGGGTCAGCATGCCTTGGTTTATGATATAAATACAACACGGGAGACATGGGAATGGGTTGATATTAAAGAGATCCCACCCGAGGATATTCGATGGGATAGCGAGGATCCAGGAATGTCTCATCGAGGAGGTCATGGTGGACAAAGCCGTGTTTATCGAAGATCCCAAAGTTTGGGTGGTTTTGCTCCTGGTTCTGGCAGAGGGAGAGGACAGTCAAAAAACCAACCCAGAAAGGAACTTTCTCCATCTCAAAATGGTGTTGGAAAGAAAGTGTTTGACGATATAGAATTACTTAATACAGAAGCATTGGTAAAGGAGGTAGAGAAAGTTTTCAATTCAAGTAATCCCGACCCCGAGGAGCTTGAAAAGGCGAAGAAAATGCTTAAAGATCACGAGCAGGCTCTTGTGGATGCAATTTCTAGACTAACTTGTGCATCTGATGGTGAAAGTGAAGGGGCGCAGCCAAATGTTCATGGCCAATTAGTTGAAAAAAGCAACGATACTTGA MNYEASDSSGTDDDLPPSHRNRVSRGGHISGKGRSVLSSFPYPRVRNMEAQIHHLEQEAYCSVLRAFKAQADAITWDKESLITELRKELRVSDDEHRELLARVNSDDIIREIREWRQAGGNLNVRRSSSQPIHDVVPSPTVSASRKKQKTSQLHSSSVPAGSRQLNNHNSSGALLANESAEAPPYDTLIGRKVWTRWPEDNSFYEALIKDYDPVKGQHALVYDINTTRETWEWVDIKEIPPEDIRWDSEDPGMSHRGGHGGQSRVYRRSQSLGGFAPGSGRGRGQSKNQPRKELSPSQNGVGKKVFDDIELLNTEALVKEVEKVFNSSNPDPEELEKAKKMLKDHEQALVDAISRLTCASDGESEGAQPNVHGQLVEKSNDT Homology
BLAST of CmoCh06G000840 vs. ExPASy Swiss-Prot
Match: F4K2F0 (Protein EMSY-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EML3 PE=1 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.6e-107 Identity = 221/402 (54.98%), Postives = 275/402 (68.41%), Query Frame = 0
BLAST of CmoCh06G000840 vs. ExPASy Swiss-Prot
Match: Q9C7C4 (Protein EMSY-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EML1 PE=1 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 4.6e-99 Identity = 203/332 (61.14%), Postives = 244/332 (73.49%), Query Frame = 0
BLAST of CmoCh06G000840 vs. ExPASy Swiss-Prot
Match: Q9FG29 (Protein EMSY-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EML2 PE=1 SV=2) HSP 1 Score: 336.7 bits (862), Expect = 3.5e-91 Identity = 189/326 (57.98%), Postives = 237/326 (72.70%), Query Frame = 0
BLAST of CmoCh06G000840 vs. ExPASy Swiss-Prot
Match: Q08A72 (Protein EMSY-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EML4 PE=2 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 6.9e-87 Identity = 197/431 (45.71%), Postives = 258/431 (59.86%), Query Frame = 0
BLAST of CmoCh06G000840 vs. ExPASy TrEMBL
Match: A0A6J1GR69 (protein EMSY-LIKE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456755 PE=4 SV=1) HSP 1 Score: 753.8 bits (1945), Expect = 3.4e-214 Identity = 382/383 (99.74%), Postives = 382/383 (99.74%), Query Frame = 0
BLAST of CmoCh06G000840 vs. ExPASy TrEMBL
Match: A0A6J1I2S3 (protein EMSY-LIKE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470022 PE=4 SV=1) HSP 1 Score: 750.4 bits (1936), Expect = 3.8e-213 Identity = 381/383 (99.48%), Postives = 381/383 (99.48%), Query Frame = 0
BLAST of CmoCh06G000840 vs. ExPASy TrEMBL
Match: A0A6J1GRL9 (protein EMSY-LIKE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456755 PE=4 SV=1) HSP 1 Score: 742.3 bits (1915), Expect = 1.0e-210 Identity = 373/375 (99.47%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of CmoCh06G000840 vs. ExPASy TrEMBL
Match: A0A6J1I1F5 (protein EMSY-LIKE 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470022 PE=4 SV=1) HSP 1 Score: 738.8 bits (1906), Expect = 1.1e-209 Identity = 372/375 (99.20%), Postives = 374/375 (99.73%), Query Frame = 0
BLAST of CmoCh06G000840 vs. ExPASy TrEMBL
Match: A0A6J1GT68 (protein EMSY-LIKE 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456755 PE=4 SV=1) HSP 1 Score: 711.4 bits (1835), Expect = 2.0e-201 Identity = 361/363 (99.45%), Postives = 362/363 (99.72%), Query Frame = 0
BLAST of CmoCh06G000840 vs. TAIR 10
Match: AT5G13020.1 (Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein ) HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-108 Identity = 221/402 (54.98%), Postives = 275/402 (68.41%), Query Frame = 0
BLAST of CmoCh06G000840 vs. TAIR 10
Match: AT3G12140.1 (Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein ) HSP 1 Score: 362.8 bits (930), Expect = 3.3e-100 Identity = 203/332 (61.14%), Postives = 244/332 (73.49%), Query Frame = 0
BLAST of CmoCh06G000840 vs. TAIR 10
Match: AT3G12140.2 (Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein ) HSP 1 Score: 362.8 bits (930), Expect = 3.3e-100 Identity = 203/332 (61.14%), Postives = 244/332 (73.49%), Query Frame = 0
BLAST of CmoCh06G000840 vs. TAIR 10
Match: AT3G12140.3 (Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein ) HSP 1 Score: 357.5 bits (916), Expect = 1.4e-98 Identity = 200/323 (61.92%), Postives = 240/323 (74.30%), Query Frame = 0
BLAST of CmoCh06G000840 vs. TAIR 10
Match: AT5G06780.1 (Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein ) HSP 1 Score: 339.0 bits (868), Expect = 5.1e-93 Identity = 190/327 (58.10%), Postives = 238/327 (72.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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