CmoCh06G000830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	50S ribosomal protein L22, chloroplastic
Location	Cmo_Chr06: 499827 .. 506591 (+)
RNA-Seq Expression	CmoCh06G000830
Synteny	CmoCh06G000830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTATGTCTCAAACTCTCAAACACTATTCATTCTTGTTCTTTACAAGTTTCTCTCCCGAAAACAAAACAAACTTTGAATCTTTCCATTCAAGTTACAACTTTTATTTCATTTTCGAAGTTTCTAGGGTGTGTTTGAAAATTTATTATCGTTCGTTCATTTAAGAGTTGGAAGACGCTCGAGTTAGCCAAAATCATCGTACATAACAATGGTGTTCTAAATAAGCTAAAATCTTGTTAAGTGTGTGATAAAAGAATGAATTTGTAAACAAAAATTTAGTCAAACTACTTGAGTCCGCCAAAGCAAGATCACAATTATCAATATTACGTATTTTCACACCAATGTCATTATTTATTTGTTTCTCGAGAAGAGATGAAAATTATGCTCGATATCCAATGTCTCTATGATGCATGTGAAAGAGAATAAAACATGTTAGATTGACTCGTGTTGATTTGTGGGGATAATCTTTACTTTTGAAAAGCAAGAAGTAGATTGTATCGCAGGAGAATACCTACTCGTGCTAGATTGACCCGTATCAAGCTATCAACTCATGCCAGTCAATCCATCGATTCATACTAGAATAATGACTCGTATCATACCAACACGAGTCAACCTAGTAGGAGTACTGTCACCATATCACGCGAGAATATCAAAGTCATCAAATGATAAATTTAAATTTCGAATTCTAACACATGAATCATTGCATTGAAAAATTACATATGCGTTCCTCCTAAAACTTGTAATCAATATCAGCATTATCTTAATTCTTATTTCAATCACAAACATCGACACAATGGAAACTTACTTAACCCAAAAAAAAAATATTAATTAACTTGGAAAACATGTTGTATGTTGCAAATTTACCCGCGCAATTGTTTGGTATAATCTATGTCAATGGCGTTTAATATTTTTCTCTGAACAATAAAATTCATATTTTCAAAAATTTATACTGCGTTCCTAAAATTTATGAGTGTATAAATCCAAGCCCACCAACAGAAGAGGTTTACACACTCTTACAATCTTACAAAGGATGTTGGTTTTTTTATTTAAAAAAATAATGAAAAAATTAATTCTATAATTTTAAGAGTTTAGAATTTACCGATATAAATAAATAAAAACTGGAAGATTAAAATGGTAATTTAACCTTAACGGTAAATTCATTTACGCATATGAACATTTTGTTTTAACCTAATAAAATTACATTGTGTATTCCATATGGGAGAAGTTTAGGGCTGTACCGTTTATACCCACGACTCACACGCATCGCTAGGCTTCTTCTTATATCACTTCCGCGCACTTTCCTCTCCCGACTCTCTGCTCGGTTCAGCTCGCGCCTCTTCTTCCCTCTCTACTTGCGAAGGCCATTTGTCGAATCCCCATCGTTTGCTGGCGATAAAGCAAGAGTGATCGAAGTGTGCAACCATTCACAACCAGCACGAGTTCTTCCATTACGATCAGATTCATTTCCCGTTTGGTATGGCTTTCGTATTCGTTTATTGTTCCATCTGCTGACAAACTAGCTCGACGTTCTTCCTCTGACCCATTTCAAAGATCAATTGCATTCAGATTATTAGCATAGTCAATTGAGTTTCTGGATTTGGACTCTTTTCTGTCAGCTACTCTGAGACATTGGTTAAAGTGCAGAAATACAAGGATATTTTGGATTATTTAGTACCTTAAATTTAGAAATTAATCCAGCAAATTGTTGATTGCAATGTGGATTGAGCTGCTGTCGTTTTGATTGTGTTGGTTTCATTTTTTTTTTTTTTGTACCCCGGTTGAGGAAAATGTTGCCATCAATTCGCAGTTTCTCCTTTATGTTATATGAATCATAAAGTTTGAGAAATGATGTGATAGGAGATGAAATTGTGGATTTGTTGTAATAGGAAGTTTAGTGATGAAGTTCTCTTCTTTGTAATTTCTTATGTTGAATCTCTAGTTATCTGTTGGGTGACTAATTATCTTCAGTATTCAAAGATTACGTTGTCTTTCTTTTTGGTTTTCAGGACTTCCGCAGTATTCTTTTTTATCATGGGTGGTTGGCAAAGATGTATTCGGTCCATGCTTGGCCATGTGCAGAAGAGAGTGGAATTGAGTTATAATGCAGCTGCCAACTCTAATTGTTATCGCTCGCAATCCACTCTTTCATATGGTCAGTGATACTTTCTTTTGGATGAGTGTATGAATGATATAAGACCTTCTAGCCCATTCAAGCATCAACATATCGTACATATAATAGAAACAGAAAATTATTTGCTAAGTTGTTCTACCTTGCAGAATCATTAAGTATGTAAGAACTATAACCTTTACAATCTGCCTTAAAGTTATTCTTAAAAGTTGAAAGTGGTGGAGAAAAGAAAGCATAAAAATGTTTTCAAAACAGCTTCCAAATAACTTCTTGATCAATTTGATTAGAGCTTTCTTTTGGGTTGTGTGGAACAAGAGGAACCAAAGGTTTTTGTGAACAATGAGGAGTTGATCATTAAAATGAAGAACCCATAATATTACATTACTTAATAGCACCCTAAACCTTATGATAGACTTGTTCATAACATTACTTGGCTATCTTGGTGTAAATTGTCTTCTTTATTCAATCTTATAACTTGTTCCTCTTCTCCAATATGGAATCCAAAACGCGATTAAATAGGTTGCAATCCTGGTAATTTGTGTTTTTGAGAGGACTCCCTCTTCAAAATGTTTATCATATTATTTGTTCATTACAAAACTGTTTTGCATCTGACTAAAATCAGTAGAACCACAGAATCTAAAAATTAAAGTTCCTGAGTTGAATCATTTTCTTATGCAGGGCAGCTGCCTTATTTACAGAGACTTTTGAAACCATCCTCAACGGGCCTTACACAGCCTTACTATCGGTGTCTCCAACAGATGGTACACATACCAACCATACCACCCTCTAAATCTTTATGATAATAATTTTGATAAAAAACTTGTAATCATTATATTTTCTGAAAAAATGTCTTCACTGTATTATCATTTTTTTTCCCTTTTAATAGGGAATTTCCAGTTCAAGGATGTTATTAGCAGATAAATCTGAGGAACCAATTTCATCTCCTCTGACTTCTGCTTTGGCTATAAGCAGTGGAAAAGATGGAGATACAGACCAGAAAGTAGTCTCTAAACCTTCCAAAGTCCAAGCTATATTAAAGGGAATCAAACAGGTGAAATCTTTAGACTCATTCTTGTTACTCACCAAAAGCTGAAGTAAAAAGAGATGAAAGTCCTAATGGAGTGAAACTTGCAAATTTTTTGAAGTTTGTGATTTTGTATTTATAGAACTTGATAAAATTTGAAGTTTTTATGATTTTCAATTCATACATTATCAACATATTATATTTTAGGACAAAAAACACTTTTCGTGTTTGAAGTTTGAGTTTGATGTCTATGTGGTCTGTGAAGCTTGAGGTTGTTGCCCATTTGCGCTTCAAAATTTCAAAAGTGACACTTTTAGTCTGTGAGGTTTAGAAAATAGTTCAAAATGGTTCTTGAGCTCATTTGACTGTTGGTTTACTTAGAGAGAGATGATGTTGATGTGCTAATTACTCGCTTGCTCACTGGGTAGATCTGGTTATGACCGAACATGTTAGTTGGTTATCACATTTCTCTCTCTTTCCTATTTTTCTTTCTTTTTCTCTTTAGCGAACTTTGCTAGCACTGTGTTGACGTTCACTGTCCGCTTTCCTATGGCCTCTTTTCTATTCTCTTTCTTCCATTCTTCTTCTAATTTGCCTCCATCAAACGTGCACCACTATCTCCTCTTCCTTGTCTCATCTGCCACTGCCACTTGTTGTAGCTTACGTCTGGAACAACCTTTCGTAGATTTGAAACAAAGTTGAGCTACATGTTGCTGACGAGATGGTAGAAGATGTGACAAGGGAGGAGGGAGATGGTGATCTTTTCATTAGTCAACTTCCTGCCAAATGAGCTTAGGAATCATTTTGAACCTTTTCCAAACCTTAGGGACAAGCCTCCTTTGAAACTTTGAGAACTAAGCTGAAACAACCCAAGCCCACTGCAAGCAAATATTGTCCGCTTTGGCCCGTTACGTATCGCCATCAATTACACTGTTTTAAAACGCATCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTTGTTCCCTCTCCAACCAATGTGAGATCTCACAATCCACCCAGCTTGGGTACCTAGCATTCTCGCTGGCACACCGCCCGGTGTCTGGCTCTTATACCATTTATAACAACCCAAGCACACCATTAGCTGCTATTGTTCGCTTTGGCCCGTTGTGTATTGCCGTCAACTTCACAGTTTTGAAACGCATCTACTAGGGAGAGGTTTCCACACCTTTATAAGAAATGATTCGTTCCCTCTCCAACCGATGTGAGATCTCACAAAGCAAACATCAAACTCAAACTTCCAAGGAACATAAATGTATTTTATACATTGGTTAAGTGTGATAACTCATTTTTTGTTGATTGAAGTTGGTTTCCACAAGGTGTTGCAACTCATTTTGGTTTACCTTTTATTTAAAAAGAATTAATATAACTATTACATTTGAATTGTTCTACCAGAGTCCCAAAAAGGTCAACTTGGTTGCTGCTTTAGTTCGAGGCATGCGTGTTGAAGATGCACTGATGCAGTTACAATTGACTGTAAAACGAGCTTCAAAAACTGTTTATCAGGTGAAACACTATCTAACAGTGCTCGATGTACACCTCGTTTACCAACCACTGTGATCGAATATTATTTGATTTCATTATTTGGGATAGTCTGCGAGACTTGAGCATACAAATGCTTGAGTTTAATGAATGATTTGGAGCTGGAGACCATTTTATTCTTAGAAAATTTCAAGTTAATGCGAGTTTCATGTCATAAATTGTTCTCCCATTTCATATGCAATATGCAACTCCTTTGGTATTGATAAAAGTTACCGATGATTTAAAAATTTGTGTTGTGACATTTCGAAGGTCATTCACTCAGCCAAAGCAAATGCAACCCACAATCATGGACTGGATTCAGATCGGCTCCTTGTTGGTAAATGAAGCAATCATAGACAAACCATTGTTTATATTTTATGGTTTTGTTTATTTAACTTCACTTCCTGTTATCTTGTACAGCTGAGGCATTTGTAGGAAAGGGATTCTTCAAGAAAAGAATATCATATCATGCCAAAGGAAAATGTGGGATCAAAGTTAGACCAGAATGTCGGCTAACAGTTGTTCTTAGGGAAACAACCCCCGAAGAAGAGGCAGAGATTGCGAAGCTGCGAGTTAGAAAATTCCGCAAGCTTTCCAAGCGCGAAAGTCGACTCGTACCTCATAAGCTTATCGAAACCACACCTATCTGGAACCGAAAGGGCAAAGCTAGAGCAAACGAAGAAGGTCGAATGGCTTCATAATCTCGTCTCTTTCTTCTTGTCATTTCGTACTTTCATGTCCTTTTGTTCTAGACAATGTAGGCAGGAGAAGTGATTTTAATGTGGTAGGAACCCAAGGGATAGCTTTTGCACAAGGAAGCCTTTGCTGCAATCACGTTCTGTTGTTTTTCTGGCATTCTTGTATAAAAATCATGTGTCCTCATTTTGTGGAGGATTTTCTTTTGTTTCGCTTATACAATCTTCACAACTTTTTTGGATTTGAATGGAAGACTATCCCGAAAATGTGATGACTTGTTTCACTTACATCTTTCTTTTCGGTGACTAATGAAAAAAATTATTCATGTGGTCGAGTTACCGACCAAAATTAAGACCAAATATGATAAATTCATATACATTTTTAATTGTTATATTCACGGGGAGTAATCTATAAGATTTTTGACTAATGACATGTCAACCTTTCGCCCTCATTGTGTTCTCATTGCATCTTTTAATTCTCCGAGTTGAATTATGGATCTCTCAAAATCAGTTGACAAGTGATGGTTTTTAGTGGTTCAAGTGATGTTGTCCCATATGCTCATATAGTTCCCTCCATATGCTCGTTTTCTGCAAAATAAACATATACATAATTGAAAGTACAATTAAGCCACAAAATTAGCACAAAAATACGACTTTAAAATAACTTATTTTATAATATGTTTGCTTTAAAACATAATTGAGAATATATTTTTATCATTTATATCTTAAAAAAAAAATGTTTTTCTTTAAAAATAACATTTAGTTCTGTAATTCTATCCCTAATAATTTGGAACAATTCTATTCCGGATAATTTGGAAAGGGCACTATTGCAATTTTTAAAGTAATAAATTATATATATATATATATATATATATATATATATATATATATATATATTAAAATGTGAAGGATTAAATATAAAAGATTTATAAAATGCACGCTAAATTAGAAGGAAAAAAATAAAAATATTAAAAATAAAGGGGAAAAAAAAAAAACATATATTTAGCGAAAATTTAAAATATATTTTGTAATTTAGATAATATATTTTCGTTATAGGGGGAAGTTGTTTGGAGCTTCGGGGCGTTTGGCGTTATTTTGCAGGTTCGGTTTTCATATTCATTGGGGACTAACACCATACCTTTCTTCCAAACATAATCATCAAGCACCAGTAAGCATTCAGTTCTTCCTCAGAACTCTCTATCTCTCTTTATATTCCTCATTAATCTCTCGTTTTGTCCATACCCTTTTCCATTTTTCACTCTTGCAGTTCCCTATCGATCGATTCGCCTCACTGCCATTGATAAAGATCCCGTCTTCTCTTCCGTCCAATCCACTTCTCAGCTTCTTCCCTGCTGAAAATCTTCTCTAA

mRNA sequence

ATGGGCTCGCGCCTCTTCTTCCCTCTCTACTTGCGAAGGCCATTTGTCGAATCCCCATCGTTTGCTGGCGATAAAGCAAGAGTGATCGAAGTGTGCAACCATTCACAACCAGCACGAGTTCTTCCATTACGATCAGATTCATTTCCCGTTTGGACTTCCGCAGTATTCTTTTTTATCATGGGTGGTTGGCAAAGATGTATTCGGTCCATGCTTGGCCATGTGCAGAAGAGAGTGGAATTGAGTTATAATGCAGCTGCCAACTCTAATTGTTATCGCTCGCAATCCACTCTTTCATATGGGCAGCTGCCTTATTTACAGAGACTTTTGAAACCATCCTCAACGGGCCTTACACAGCCTTACTATCGGTGTCTCCAACAGATGGGAATTTCCAGTTCAAGGATGTTATTAGCAGATAAATCTGAGGAACCAATTTCATCTCCTCTGACTTCTGCTTTGGCTATAAGCAGTGGAAAAGATGGAGATACAGACCAGAAAGTAGTCTCTAAACCTTCCAAAGTCCAAGCTATATTAAAGGGAATCAAACAGAGTCCCAAAAAGGTCAACTTGGTTGCTGCTTTAGTTCGAGGCATGCGTGTTGAAGATGCACTGATGCAGTTACAATTGACTGTAAAACGAGCTTCAAAAACTGTTTATCAGGTCATTCACTCAGCCAAAGCAAATGCAACCCACAATCATGGACTGGATTCAGATCGGCTCCTTGTTGCTGAGGCATTTGTAGGAAAGGGATTCTTCAAGAAAAGAATATCATATCATGCCAAAGGAAAATGTGGGATCAAAGTTAGACCAGAATGTCGGCTAACAGTTGTTCTTAGGGAAACAACCCCCGAAGAAGAGGCAGAGATTGCGAAGCTGCGAGTTAGAAAATTCCGCAAGCTTTCCAAGCGCGAAAGTCGACTCAGCAAACGAAGAAGGTCGAATGGCTTCATAATCTCGTCTCTTTCTTCTTGTCATTTCGTACTTTCATGTCCTTTTGTTCTAGACAATGTAGGCAGGAGAAGTGATTTTAATGTGGTAGGAACCCAAGGGATAGCTTTTGCACAAGGAAGCCTTTGCTGCAATCACGTTCTGTTGTTTTTCTGGCATTCTTGTATAAAAATCATGTGTCCTCATTTTGTGGAGGATTTTCTTTTGTTTCGCTTATACAATCTTCACAACTTTTTTGGATTTGAATGGAAGACTATCCCGAAAATGTTCGGTTTTCATATTCATTGGGGACTAACACCATACCTTTCTTCCAAACATAATCATCAAGCACCATTCCCTATCGATCGATTCGCCTCACTGCCATTGATAAAGATCCCGTCTTCTCTTCCGTCCAATCCACTTCTCAGCTTCTTCCCTGCTGAAAATCTTCTCTAA

Coding sequence (CDS)

ATGGGCTCGCGCCTCTTCTTCCCTCTCTACTTGCGAAGGCCATTTGTCGAATCCCCATCGTTTGCTGGCGATAAAGCAAGAGTGATCGAAGTGTGCAACCATTCACAACCAGCACGAGTTCTTCCATTACGATCAGATTCATTTCCCGTTTGGACTTCCGCAGTATTCTTTTTTATCATGGGTGGTTGGCAAAGATGTATTCGGTCCATGCTTGGCCATGTGCAGAAGAGAGTGGAATTGAGTTATAATGCAGCTGCCAACTCTAATTGTTATCGCTCGCAATCCACTCTTTCATATGGGCAGCTGCCTTATTTACAGAGACTTTTGAAACCATCCTCAACGGGCCTTACACAGCCTTACTATCGGTGTCTCCAACAGATGGGAATTTCCAGTTCAAGGATGTTATTAGCAGATAAATCTGAGGAACCAATTTCATCTCCTCTGACTTCTGCTTTGGCTATAAGCAGTGGAAAAGATGGAGATACAGACCAGAAAGTAGTCTCTAAACCTTCCAAAGTCCAAGCTATATTAAAGGGAATCAAACAGAGTCCCAAAAAGGTCAACTTGGTTGCTGCTTTAGTTCGAGGCATGCGTGTTGAAGATGCACTGATGCAGTTACAATTGACTGTAAAACGAGCTTCAAAAACTGTTTATCAGGTCATTCACTCAGCCAAAGCAAATGCAACCCACAATCATGGACTGGATTCAGATCGGCTCCTTGTTGCTGAGGCATTTGTAGGAAAGGGATTCTTCAAGAAAAGAATATCATATCATGCCAAAGGAAAATGTGGGATCAAAGTTAGACCAGAATGTCGGCTAACAGTTGTTCTTAGGGAAACAACCCCCGAAGAAGAGGCAGAGATTGCGAAGCTGCGAGTTAGAAAATTCCGCAAGCTTTCCAAGCGCGAAAGTCGACTCAGCAAACGAAGAAGGTCGAATGGCTTCATAATCTCGTCTCTTTCTTCTTGTCATTTCGTACTTTCATGTCCTTTTGTTCTAGACAATGTAGGCAGGAGAAGTGATTTTAATGTGGTAGGAACCCAAGGGATAGCTTTTGCACAAGGAAGCCTTTGCTGCAATCACGTTCTGTTGTTTTTCTGGCATTCTTGTATAAAAATCATGTGTCCTCATTTTGTGGAGGATTTTCTTTTGTTTCGCTTATACAATCTTCACAACTTTTTTGGATTTGAATGGAAGACTATCCCGAAAATGTTCGGTTTTCATATTCATTGGGGACTAACACCATACCTTTCTTCCAAACATAATCATCAAGCACCATTCCCTATCGATCGATTCGCCTCACTGCCATTGATAAAGATCCCGTCTTCTCTTCCGTCCAATCCACTTCTCAGCTTCTTCCCTGCTGAAAATCTTCTCTAA

Protein sequence

MGSRLFFPLYLRRPFVESPSFAGDKARVIEVCNHSQPARVLPLRSDSFPVWTSAVFFFIMGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQPYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKLSKRESRLSKRRRSNGFIISSLSSCHFVLSCPFVLDNVGRRSDFNVVGTQGIAFAQGSLCCNHVLLFFWHSCIKIMCPHFVEDFLLFRLYNLHNFFGFEWKTIPKMFGFHIHWGLTPYLSSKHNHQAPFPIDRFASLPLIKIPSSLPSNPLLSFFPAENLL

Homology

[Close]

BLAST of CmoCh06G000830 vs. ExPASy Swiss-Prot
Match: Q92QG5 (50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.7e-19
Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 169 KPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 228
           K ++ QA+ + I+ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAVARTIRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVKKTLESAIANA 70

Query: 229 THNHGLDSDRLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEA 287
            +NH LD D L+VAEAFVGK    KR     +G+     +P   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDSLIVAEAFVGKSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

[Close]

BLAST of CmoCh06G000830 vs. ExPASy Swiss-Prot
Match: A6U864 (50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.7e-19
Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 169 KPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 228
           K ++ QA+ + I+ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAVARTIRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVRKTLESAIANA 70

Query: 229 THNHGLDSDRLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEA 287
            +NH LD D L+VAEAFVGK    KR     +G+     +P   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDSLIVAEAFVGKSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

[Close]

BLAST of CmoCh06G000830 vs. ExPASy Swiss-Prot
Match: Q0ANQ5 (50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rplV PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-18
Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 0


Query: 171 SKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 230
           ++ +A L+ I+ SP+K+NLVAAL+RG +VE AL  L+ + KR SK V + + SA ANA +
Sbjct: 13  NEARAKLRMIRTSPQKLNLVAALIRGKKVERALADLEFSRKRISKEVKKTLESAIANAEN 72

Query: 231 NHGLDSDRLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRE 280
           NHGLD D L+V+EAFVGK    KR    A+G+    ++P   LT+V+RE
Sbjct: 73  NHGLDIDSLVVSEAFVGKNLVMKRFRARARGRGAKILKPFSELTIVVRE 121

[Close]

BLAST of CmoCh06G000830 vs. ExPASy Swiss-Prot
Match: Q8UE23 (50S ribosomal protein L22 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=rplV PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.7e-18
Identity = 52/118 (44.07%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 169 KPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 228
           K ++ QAI + ++ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAIARTLRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVKKTLESAIANA 70

Query: 229 THNHGLDSDRLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEA 287
            +NH LD D L+VAEA+VGK    KR     +G+     +P   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDALVVAEAYVGKSITMKRFHARGRGRASRIEKPFAHLTIVVREVEEKGEA 128

[Close]

BLAST of CmoCh06G000830 vs. ExPASy Swiss-Prot
Match: Q98N52 (50S ribosomal protein L22 OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=rplV PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.7e-18
Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 171 SKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 230
           ++ +A+L+ I+ SP+K+NLVAAL+RG +V  AL  L+ + KR S TV + + SA ANA +
Sbjct: 13  NEARAVLRTIRISPQKLNLVAALIRGKKVATALSDLEFSAKRISGTVKKTLESAIANAEN 72

Query: 231 NHGLDSDRLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEA 287
           NH LD D L+VAEA+VGK    KR     +G+     +P   LT+V+RE   + EA
Sbjct: 73  NHDLDVDALVVAEAYVGKSIVMKRFHARGRGRASRIEKPFSHLTIVVREVEEKGEA 128

[Close]

BLAST of CmoCh06G000830 vs. ExPASy TrEMBL
Match: A0A6J1GU02 (50S ribosomal protein L22, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457075 PE=3 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 5.3e-129
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 119
           MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 120 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 179
           YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 120

Query: 180 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 239
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 180

Query: 240 LVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 299
           LVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL
Sbjct: 181 LVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 240

Query: 300 SKRESRL 307
           SKRESRL
Sbjct: 241 SKRESRL 247

[Close]

BLAST of CmoCh06G000830 vs. ExPASy TrEMBL
Match: A0A6J1I573 (50S ribosomal protein L22, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470023 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 3.8e-127
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 119
           MGGWQRCIRSMLGHVQKRVELSYNAA NS CYRSQSTLSYGQLPYLQRLLKPSSTGLTQP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 120 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 179
           YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 120

Query: 180 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 239
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 180

Query: 240 LVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 299
           LVAEAFVGKG FKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL
Sbjct: 181 LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 240

Query: 300 SKRESRL 307
           SKRESRL
Sbjct: 241 SKRESRL 247

[Close]

BLAST of CmoCh06G000830 vs. ExPASy TrEMBL
Match: A0A6J1DVK1 (50S ribosomal protein L22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024848 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115
Identity = 224/248 (90.32%), Postives = 236/248 (95.16%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 119
           M GWQR +RSMLGHVQKRVELSYN AANSNCYR QS+LSYG+LPYLQRLLKPSS G+TQP
Sbjct: 1   MVGWQRYVRSMLGHVQKRVELSYNVAANSNCYRLQSSLSYGELPYLQRLLKPSSAGITQP 60

Query: 120 YYRCLQQMGISSSRMLLADKSEE-PISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILK 179
           YY+CLQQMGISSSR LLADKSEE  +SSPLTSALA+SSGK+GD DQKVVSKPSKVQAILK
Sbjct: 61  YYQCLQQMGISSSRFLLADKSEEAAVSSPLTSALALSSGKEGDKDQKVVSKPSKVQAILK 120

Query: 180 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 239
           GIKQSPKKVNLVAALVRGMRVEDAL+QLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALLQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180

Query: 240 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 299
           LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVV+RE TPEEEAEIAKLRV  FRK
Sbjct: 181 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVVREITPEEEAEIAKLRVSNFRK 240

Query: 300 LSKRESRL 307
           L+KRESRL
Sbjct: 241 LTKRESRL 248

[Close]

BLAST of CmoCh06G000830 vs. ExPASy TrEMBL
Match: A0A1S4E5G5 (50S ribosomal protein L22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107992071 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 1.4e-105
Identity = 207/248 (83.47%), Postives = 231/248 (93.15%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 119
           M  WQRC+RS+LGH+Q +VELSYNAA+NS+ YR QS+LS G+LPYLQRLLKPSS G+ QP
Sbjct: 1   MVSWQRCLRSILGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAGIAQP 60

Query: 120 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 179
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKVV K SKVQA+LK
Sbjct: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVVCKRSKVQAVLK 120

Query: 180 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 239
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+D+DR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDADR 180

Query: 240 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 299
           LLVAEAFVGKG F+KR+SYHAKG+CGI+V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGIEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240

Query: 300 LSKRESRL 307
           L+KRE+RL
Sbjct: 241 LTKRENRL 247

[Close]

BLAST of CmoCh06G000830 vs. ExPASy TrEMBL
Match: A0A0A0LVB7 (50S ribosomal protein L22, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G153000 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 205/248 (82.66%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 119
           M GWQRC+RSMLGH+Q +VELSYNAA+NS+ YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60

Query: 120 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 179
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120

Query: 180 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 239
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180

Query: 240 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 299
           LLVAEAFVGKG F+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240

Query: 300 LSKRESRL 307
           L+KRE +L
Sbjct: 241 LTKREHQL 247

[Close]

BLAST of CmoCh06G000830 vs. TAIR 10
Match: AT4G28360.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 266.2 bits (679), Expect = 5.0e-71
Identity = 152/249 (61.04%), Postives = 195/249 (78.31%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAAN--SNCYRSQSTLSYGQLPYLQRLLKPSSTGLT 119
           M GW+R +++++  V +RV+ S+ + AN  S+    +S  S G   YLQ LL+PS +  +
Sbjct: 1   MVGWKRNLQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQG---YLQSLLRPSYS--S 60

Query: 120 QPYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAIL 179
           +P Y  LQQ+GIS+SR L A  SEEP+SSPL+S   + SGK  + +QK++ K  KVQA+L
Sbjct: 61  RPLYHHLQQLGISTSRQLQA--SEEPVSSPLSSPALLGSGK--EEEQKIIPKRQKVQAVL 120

Query: 180 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSD 239
           K IKQSPKKVNLVAALVRGMRVEDAL+QLQ+TVKRA++TVY+VIH+A+ANATHNHGLD D
Sbjct: 121 KSIKQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDPD 180

Query: 240 RLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFR 299
           RLLVAEAFVGKG F K+++YHAKG+ GI   P CRLTV++RETTPEEEAEIA+L+V  F+
Sbjct: 181 RLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNFK 240

Query: 300 KLSKRESRL 307
           K SKRE +L
Sbjct: 241 KKSKRERQL 240

[Close]

BLAST of CmoCh06G000830 vs. TAIR 10
Match: AT1G52370.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 263.5 bits (672), Expect = 3.3e-70
Identity = 152/248 (61.29%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRS-QSTLSYGQLPYLQRLLKPSSTGLTQ 119
           M GWQ+ ++ ++  V KRV+ S+ + AN +  R+ +S  S G   YLQ LL+  ST  ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 120 PYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILK 179
           P Y  LQQ+GIS+SR L A   EEP+SSPL+S   + SGK  + +QK++ K  KVQA+LK
Sbjct: 61  PLYYHLQQLGISTSRQLQA--GEEPVSSPLSSPALLGSGK--EEEQKIIPKRQKVQAVLK 120

Query: 180 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 239
            IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHGLD DR
Sbjct: 121 SIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDR 180

Query: 240 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 299
           LLVAEAFVGKG F K+++YHAKG+ GI   P CRLTV++RETT EEEAEIA+L+V  F+K
Sbjct: 181 LLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKK 239

Query: 300 LSKRESRL 307
           L+KR+ +L
Sbjct: 241 LNKRQRQL 239

[Close]

BLAST of CmoCh06G000830 vs. TAIR 10
Match: AT1G52370.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 263.5 bits (672), Expect = 3.3e-70
Identity = 152/248 (61.29%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRS-QSTLSYGQLPYLQRLLKPSSTGLTQ 119
           M GWQ+ ++ ++  V KRV+ S+ + AN +  R+ +S  S G   YLQ LL+  ST  ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 120 PYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILK 179
           P Y  LQQ+GIS+SR L A   EEP+SSPL+S   + SGK  + +QK++ K  KVQA+LK
Sbjct: 61  PLYYHLQQLGISTSRQLQA--GEEPVSSPLSSPALLGSGK--EEEQKIIPKRQKVQAVLK 120

Query: 180 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 239
            IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHGLD DR
Sbjct: 121 SIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDR 180

Query: 240 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 299
           LLVAEAFVGKG F K+++YHAKG+ GI   P CRLTV++RETT EEEAEIA+L+V  F+K
Sbjct: 181 LLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKK 239

Query: 300 LSKRESRL 307
           L+KR+ +L
Sbjct: 241 LNKRQRQL 239

[Close]

BLAST of CmoCh06G000830 vs. TAIR 10
Match: AT1G52370.3 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 263.5 bits (672), Expect = 3.3e-70
Identity = 152/248 (61.29%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 60  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRS-QSTLSYGQLPYLQRLLKPSSTGLTQ 119
           M GWQ+ ++ ++  V KRV+ S+ + AN +  R+ +S  S G   YLQ LL+  ST  ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 120 PYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILK 179
           P Y  LQQ+GIS+SR L A   EEP+SSPL+S   + SGK  + +QK++ K  KVQA+LK
Sbjct: 61  PLYYHLQQLGISTSRQLQA--GEEPVSSPLSSPALLGSGK--EEEQKIIPKRQKVQAVLK 120

Query: 180 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 239
            IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHGLD DR
Sbjct: 121 SIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDR 180

Query: 240 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 299
           LLVAEAFVGKG F K+++YHAKG+ GI   P CRLTV++RETT EEEAEIA+L+V  F+K
Sbjct: 181 LLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKK 239

Query: 300 LSKRESRL 307
           L+KR+ +L
Sbjct: 241 LNKRQRQL 239

[Close]

BLAST of CmoCh06G000830 vs. TAIR 10
Match: ATCG00810.1 (ribosomal protein L22 )

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-08
Identity = 37/125 (29.60%), Postives = 69/125 (55.20%), Query Frame = 0


Query: 171 SKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 230
           ++V A+ + I  S  K   V   +RG   E+ALM L+L   R    ++++++SA ANA+H
Sbjct: 11  TEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASH 70

Query: 231 NHGLDSDRLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAK 290
           N G     L++++A V +G   K++   A+G+     R  C +T+VL + +  ++ E   
Sbjct: 71  NKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQYEEYL 130

Query: 291 LRVRK 296
           + ++K
Sbjct: 131 MYLKK 135

The following BLAST results are available for this feature:

BLAST of CmoCh06G000830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q92QG5	5.7e-19	44.92	50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rplV ...	[more]
A6U864	5.7e-19	44.92	50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=...	[more]
Q0ANQ5	1.3e-18	48.62	50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rplV P...	[more]
Q8UE23	3.7e-18	44.07	50S ribosomal protein L22 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=1...	[more]
Q98N52	3.7e-18	44.83	50S ribosomal protein L22 OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 91...	[more]

BLAST of CmoCh06G000830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GU02	5.3e-129	100.00	50S ribosomal protein L22, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I573	3.8e-127	98.79	50S ribosomal protein L22, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1DVK1	1.2e-115	90.32	50S ribosomal protein L22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A1S4E5G5	1.4e-105	83.47	50S ribosomal protein L22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107992071...	[more]
A0A0A0LVB7	1.2e-104	82.66	50S ribosomal protein L22, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G153...	[more]

BLAST of CmoCh06G000830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28360.1	5.0e-71	61.04	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.1	3.3e-70	61.29	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.2	3.3e-70	61.29	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.3	3.3e-70	61.29	Ribosomal protein L22p/L17e family protein	[more]
ATCG00810.1	1.2e-08	29.60	ribosomal protein L22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036394	Ribosomal protein L22/L17 superfamily	GENE3D	3.90.470.10	Ribosomal protein L22/L17	coord: 158..310 e-value: 1.8E-47 score: 163.1
IPR036394	Ribosomal protein L22/L17 superfamily	SUPERFAMILY	54843	Ribosomal protein L22	coord: 165..280
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 177..278 e-value: 1.3E-25 score: 89.6
IPR001063	Ribosomal protein L22/L17	CDD	cd00336	Ribosomal_L22	coord: 173..277 e-value: 7.47981E-37 score: 129.148
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	TIGRFAM	TIGR01044	TIGR01044	coord: 176..276 e-value: 5.6E-23 score: 79.1
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	PANTHER	PTHR13501	CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED	coord: 94..308
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	HAMAP	MF_01331_B	Ribosomal_L22_B	coord: 171..280 score: 20.380047
None	No IPR available	PANTHER	PTHR13501:SF8	39S RIBOSOMAL PROTEIN L22, MITOCHONDRIAL	coord: 94..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000830.1	CmoCh06G000830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042255	ribosome assembly
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome