Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGAGGAGCAACTACTTCTGAGATGAGCTTTGTTCATGAAGGCTTATCTCACAAACCAATCTTTGGCTGCAACCATAATGATATGAGAGACAGAAGAGAGGCTTCTGATACTCATTCTCACCACTTTCTTGCTCGTTGTACCATTGTTGACGATTCCTCTGAGTTAAGTATTTTTGATGCAAAGAAGTATTTCAATGAGGTTTCAACCAACAATATCAATAAGGTTTCTCCTATGACGAGTATTGAGCCGATGTTGATGTTGAAGGGACAGTCCGAAGATCAGGATTCGGATAAGGATTCAGAATTATCTAGATCCAAACCTTGGACTTGTGGAGGTGTTACTCCTCCGTCATCTGTGGTAGCTTCTAAATTCTCTCCTGTTGTTGCCTCCATTGATGGGTATCGTCAGAGTTATCGAGCTCGATCTTTTCACTCTACTACGCCAACCGCCTCATCGGAGGCTAGTTGGAACAGTCAAACAGGGTTGCTCTCAAACCCTCCTGGAGCAATTTCTGTATCGGTTTTGCGTGGTGATTCAAGTCCTCATTCACAAAAGAAAATTCGAAAGCCACCGATGTCATCATCTATAACGGGAAGATGGATTTTTGGAAACTCTAAATGCCCTTGCATTGGGAAGAAGTCGGTTCAAGTTCATGAGTCTAAAGTGATATTAGACCCAAAGGCACGTCCTTTTATCAACAACAACAATACTACCAAAGACAAAGACAACTATTCTGAATCAGAGTCTTCGTCGTCGTCAAAGAAAACTTCTAGTGACAACACAATGTTTTTGCAACATTCAGATAACAACGTGATTTGGAGCACTCACAAATGTGTTCCTCCAAATTTGCTTCTTCAAGGACCCACGACACAACGTGTAATAGCTTCCACTAGCTTCTCTTTTCCCATCTTGAAAAACAAGTCCAACAGCAACAATGAAGATCATTTTTCAATCAGATCCATAGACCCTGTTTTAATCCAAGACCCACCTCGAGATTCTCTAGAAGTTTTCAAACCGAGCTCTGTCAAAGATGACAATGGTGATAACGACCAAAAATCACGAATACTAGCCAACGTTGCAGCAACTGGTGGCAACGCCACCATCATCAGTGACACCGATGACATGGCCAGTGATGCTAGCTCAGACCTATTCGAAATCGAAAGCTTCTCCACTCAAACTGCTAGCACCACCACCATCTCATACTCGAGTATGTTCCACCGACGAGACTCAATGGAACTAGAAGCTAGAAGATTAGGGTTGAATGCGGCGGCCACACATTGTAGTCTTGACGAGCCAATGACGCCATCGACCGATTGGTATGAGCCAAGTGAAGCAAGCATCGATTGGAGTGTCACGACGGCTGAAGGCTTTGATCGGGCGAGCATCGCCAACATGTCAGAGGTGGAGGAGCCTTGGACCGAGAAAAACAACATCAATAAAAATAACAACCACAGAAGAAGATCATCATCGGGAAACGGGTTGCTGAGTTGTCGGTCGGAGAAGGCGGTGAGTGTGGGCCCACAGCCGGTGACGAAGCATGTGGGGAGTAGGCCACCATTGGGGAAGAAGCCACCAACACCACTAGCAAGGTCTAGTTCAGCTCGCCAATCTCTTACTTTTGCTGCCTGA
mRNA sequence
ATGGAAAGAGGAGCAACTACTTCTGAGATGAGCTTTGTTCATGAAGGCTTATCTCACAAACCAATCTTTGGCTGCAACCATAATGATATGAGAGACAGAAGAGAGGCTTCTGATACTCATTCTCACCACTTTCTTGCTCGTTGTACCATTGTTGACGATTCCTCTGAGTTAAGTATTTTTGATGCAAAGAAGTATTTCAATGAGGTTTCAACCAACAATATCAATAAGGTTTCTCCTATGACGAGTATTGAGCCGATGTTGATGTTGAAGGGACAGTCCGAAGATCAGGATTCGGATAAGGATTCAGAATTATCTAGATCCAAACCTTGGACTTGTGGAGGTGTTACTCCTCCGTCATCTGTGGTAGCTTCTAAATTCTCTCCTGTTGTTGCCTCCATTGATGGGTATCGTCAGAGTTATCGAGCTCGATCTTTTCACTCTACTACGCCAACCGCCTCATCGGAGGCTAGTTGGAACAGTCAAACAGGGTTGCTCTCAAACCCTCCTGGAGCAATTTCTGTATCGGTTTTGCGTGGTGATTCAAGTCCTCATTCACAAAAGAAAATTCGAAAGCCACCGATGTCATCATCTATAACGGGAAGATGGATTTTTGGAAACTCTAAATGCCCTTGCATTGGGAAGAAGTCGGTTCAAGTTCATGAGTCTAAAGTGATATTAGACCCAAAGGCACGTCCTTTTATCAACAACAACAATACTACCAAAGACAAAGACAACTATTCTGAATCAGAGTCTTCGTCGTCGTCAAAGAAAACTTCTAGTGACAACACAATGTTTTTGCAACATTCAGATAACAACGTGATTTGGAGCACTCACAAATGTGTTCCTCCAAATTTGCTTCTTCAAGGACCCACGACACAACGTGTAATAGCTTCCACTAGCTTCTCTTTTCCCATCTTGAAAAACAAGTCCAACAGCAACAATGAAGATCATTTTTCAATCAGATCCATAGACCCTGTTTTAATCCAAGACCCACCTCGAGATTCTCTAGAAGTTTTCAAACCGAGCTCTGTCAAAGATGACAATGGTGATAACGACCAAAAATCACGAATACTAGCCAACGTTGCAGCAACTGGTGGCAACGCCACCATCATCAGTGACACCGATGACATGGCCAGTGATGCTAGCTCAGACCTATTCGAAATCGAAAGCTTCTCCACTCAAACTGCTAGCACCACCACCATCTCATACTCGAGTATGTTCCACCGACGAGACTCAATGGAACTAGAAGCTAGAAGATTAGGGTTGAATGCGGCGGCCACACATTGTAGTCTTGACGAGCCAATGACGCCATCGACCGATTGGTATGAGCCAAGTGAAGCAAGCATCGATTGGAGTGTCACGACGGCTGAAGGCTTTGATCGGGCGAGCATCGCCAACATGTCAGAGGTGGAGGAGCCTTGGACCGAGAAAAACAACATCAATAAAAATAACAACCACAGAAGAAGATCATCATCGGGAAACGGGTTGCTGAGTTGTCGGTCGGAGAAGGCGGTGAGTGTGGGCCCACAGCCGGTGACGAAGCATGTGGGGAGTAGGCCACCATTGGGGAAGAAGCCACCAACACCACTAGCAAGGTCTAGTTCAGCTCGCCAATCTCTTACTTTTGCTGCCTGA
Coding sequence (CDS)
ATGGAAAGAGGAGCAACTACTTCTGAGATGAGCTTTGTTCATGAAGGCTTATCTCACAAACCAATCTTTGGCTGCAACCATAATGATATGAGAGACAGAAGAGAGGCTTCTGATACTCATTCTCACCACTTTCTTGCTCGTTGTACCATTGTTGACGATTCCTCTGAGTTAAGTATTTTTGATGCAAAGAAGTATTTCAATGAGGTTTCAACCAACAATATCAATAAGGTTTCTCCTATGACGAGTATTGAGCCGATGTTGATGTTGAAGGGACAGTCCGAAGATCAGGATTCGGATAAGGATTCAGAATTATCTAGATCCAAACCTTGGACTTGTGGAGGTGTTACTCCTCCGTCATCTGTGGTAGCTTCTAAATTCTCTCCTGTTGTTGCCTCCATTGATGGGTATCGTCAGAGTTATCGAGCTCGATCTTTTCACTCTACTACGCCAACCGCCTCATCGGAGGCTAGTTGGAACAGTCAAACAGGGTTGCTCTCAAACCCTCCTGGAGCAATTTCTGTATCGGTTTTGCGTGGTGATTCAAGTCCTCATTCACAAAAGAAAATTCGAAAGCCACCGATGTCATCATCTATAACGGGAAGATGGATTTTTGGAAACTCTAAATGCCCTTGCATTGGGAAGAAGTCGGTTCAAGTTCATGAGTCTAAAGTGATATTAGACCCAAAGGCACGTCCTTTTATCAACAACAACAATACTACCAAAGACAAAGACAACTATTCTGAATCAGAGTCTTCGTCGTCGTCAAAGAAAACTTCTAGTGACAACACAATGTTTTTGCAACATTCAGATAACAACGTGATTTGGAGCACTCACAAATGTGTTCCTCCAAATTTGCTTCTTCAAGGACCCACGACACAACGTGTAATAGCTTCCACTAGCTTCTCTTTTCCCATCTTGAAAAACAAGTCCAACAGCAACAATGAAGATCATTTTTCAATCAGATCCATAGACCCTGTTTTAATCCAAGACCCACCTCGAGATTCTCTAGAAGTTTTCAAACCGAGCTCTGTCAAAGATGACAATGGTGATAACGACCAAAAATCACGAATACTAGCCAACGTTGCAGCAACTGGTGGCAACGCCACCATCATCAGTGACACCGATGACATGGCCAGTGATGCTAGCTCAGACCTATTCGAAATCGAAAGCTTCTCCACTCAAACTGCTAGCACCACCACCATCTCATACTCGAGTATGTTCCACCGACGAGACTCAATGGAACTAGAAGCTAGAAGATTAGGGTTGAATGCGGCGGCCACACATTGTAGTCTTGACGAGCCAATGACGCCATCGACCGATTGGTATGAGCCAAGTGAAGCAAGCATCGATTGGAGTGTCACGACGGCTGAAGGCTTTGATCGGGCGAGCATCGCCAACATGTCAGAGGTGGAGGAGCCTTGGACCGAGAAAAACAACATCAATAAAAATAACAACCACAGAAGAAGATCATCATCGGGAAACGGGTTGCTGAGTTGTCGGTCGGAGAAGGCGGTGAGTGTGGGCCCACAGCCGGTGACGAAGCATGTGGGGAGTAGGCCACCATTGGGGAAGAAGCCACCAACACCACTAGCAAGGTCTAGTTCAGCTCGCCAATCTCTTACTTTTGCTGCCTGA
Protein sequence
MERGATTSEMSFVHEGLSHKPIFGCNHNDMRDRREASDTHSHHFLARCTIVDDSSELSIFDAKKYFNEVSTNNINKVSPMTSIEPMLMLKGQSEDQDSDKDSELSRSKPWTCGGVTPPSSVVASKFSPVVASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGAISVSVLRGDSSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQVHESKVILDPKARPFINNNNTTKDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTHKCVPPNLLLQGPTTQRVIASTSFSFPILKNKSNSNNEDHFSIRSIDPVLIQDPPRDSLEVFKPSSVKDDNGDNDQKSRILANVAATGGNATIISDTDDMASDASSDLFEIESFSTQTASTTTISYSSMFHRRDSMELEARRLGLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTAEGFDRASIANMSEVEEPWTEKNNINKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVGSRPPLGKKPPTPLARSSSARQSLTFAA
Homology
BLAST of CmoCh06G000550 vs. ExPASy Swiss-Prot
Match:
Q9FYE2 (Protein PHYTOCHROME KINASE SUBSTRATE 4 OS=Arabidopsis thaliana OX=3702 GN=PKS4 PE=1 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 2.2e-14
Identity = 146/504 (28.97%), Postives = 189/504 (37.50%), Query Frame = 0
Query: 52 DDSSELSIFDAKKYFNEVSTNNINKVSPMTSIEPMLMLKGQSEDQDSDKDSELSRSKPWT 111
++ +ELSIF+A+ YF+E +N+ SR +
Sbjct: 50 NEDTELSIFEARSYFSENGSND-------------------------------SRCQTRN 109
Query: 112 CGGVTPPSSVVASKFSPVVASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGA 171
G +FS V S + SF + TASSEASWNSQTGLLSN
Sbjct: 110 LSG---------PRFSSVA--------SAKVSSF-TVGQTASSEASWNSQTGLLSNKN-- 169
Query: 172 ISVSVLRGDSSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQVHESKV-ILDPKA 231
R S ++ +K P RW F CPC KSVQV ESK I PK
Sbjct: 170 ------RQGSDRDGRRSSKKGP-------RWFFRRRACPCSSSKSVQVQESKPRIAVPKT 229
Query: 232 RPFINNNNTTKDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTHKCVPPNLLLQGP 291
D + S + SS + L N V S N + P
Sbjct: 230 -----------GSDRIVSNRIVHSHQTISSPEPIRLTIPSNTVTRSID--YTANKEARAP 289
Query: 292 TTQRVIASTSFSFPILKNKSN-SNNEDHFSIRSIDPVLIQDPPRDSLEVFKPSSVKDDNG 351
++FSFP L S S N + + I PV I+ V P+S K
Sbjct: 290 V-------SNFSFPTLNETSQLSENPKNPVLNHIKPVRIEPALLPIKPVLNPTSPKG--- 349
Query: 352 DNDQKSRILANVAATGGNATIISDTDDMASDASSDLFEIESFSTQTASTTTISYSSMFHR 411
+I D ++ SDASSDLFEIESFSTQTA+
Sbjct: 350 --------------------VIID-EEATSDASSDLFEIESFSTQTAARPWAP-----PV 401
Query: 412 RDSMELEARRLGLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTAE-------GFDRA 471
RDSME G YEPSEAS+ WSV TAE F R
Sbjct: 410 RDSMEETVSEYG--------------------YEPSEASVTWSVMTAEPASAVAANFSRI 401
Query: 472 SIANMSEVEEPWTEKNNINKNNNHRRRSSSGNGLLSCRSEKAVSVG-----PQPVTKHVG 531
++++ S + +K GLL+C EKAV V QPV K VG
Sbjct: 470 ALSSSSTAFSGYDKKR---------------TGLLNCHCEKAVMVNGDKRLVQPV-KSVG 401
Query: 532 SRPPLGKKPPTPLARSSSARQSLT 542
+ + K L + S++ S+T
Sbjct: 530 VQNDVAGK---VLCNNGSSKLSVT 401
BLAST of CmoCh06G000550 vs. ExPASy TrEMBL
Match:
A0A6J1GDT3 (protein PHYTOCHROME KINASE SUBSTRATE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111453263 PE=4 SV=1)
HSP 1 Score: 1062.0 bits (2745), Expect = 8.4e-307
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0
Query: 1 MERGATTSEMSFVHEGLSHKPIFGCNHNDMRDRREASDTHSHHFLARCTIVDDSSELSIF 60
MERGATTSEMSFVHEGLSHKPIFGCNHNDMRDRREASDTHSHHFLARCTIVDDSSELSIF
Sbjct: 1 MERGATTSEMSFVHEGLSHKPIFGCNHNDMRDRREASDTHSHHFLARCTIVDDSSELSIF 60
Query: 61 DAKKYFNEVSTNNINKVSPMTSIEPMLMLKGQSEDQDSDKDSELSRSKPWTCGGVTPPSS 120
DAKKYFNEVSTNNINKVSPMTSIEPMLMLKGQSEDQDSDKDSELSRSKPWTCGGVTPPSS
Sbjct: 61 DAKKYFNEVSTNNINKVSPMTSIEPMLMLKGQSEDQDSDKDSELSRSKPWTCGGVTPPSS 120
Query: 121 VVASKFSPVVASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGAISVSVLRGD 180
VVASKFSPVVASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGAISVSVLRGD
Sbjct: 121 VVASKFSPVVASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGAISVSVLRGD 180
Query: 181 SSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQVHESKVILDPKARPFINNNNTT 240
SSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQVHESKVILDPKARPFINNNNTT
Sbjct: 181 SSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQVHESKVILDPKARPFINNNNTT 240
Query: 241 KDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTHKCVPPNLLLQGPTTQRVIASTS 300
KDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTHKCVPPNLLLQGPTTQRVIASTS
Sbjct: 241 KDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTHKCVPPNLLLQGPTTQRVIASTS 300
Query: 301 FSFPILKNKSNSNNEDHFSIRSIDPVLIQDPPRDSLEVFKPSSVKDDNGDNDQKSRILAN 360
FSFPILKNKSNSNNEDHFSIRSIDPVLIQDPPRDSLEVFKPSSVKDDNGDNDQKSRILAN
Sbjct: 301 FSFPILKNKSNSNNEDHFSIRSIDPVLIQDPPRDSLEVFKPSSVKDDNGDNDQKSRILAN 360
Query: 361 VAATGGNATIISDTDDMASDASSDLFEIESFSTQTASTTTISYSSMFHRRDSMELEARRL 420
VAATGGNATIISDTDDMASDASSDLFEIESFSTQTASTTTISYSSMFHRRDSMELEARRL
Sbjct: 361 VAATGGNATIISDTDDMASDASSDLFEIESFSTQTASTTTISYSSMFHRRDSMELEARRL 420
Query: 421 GLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTAEGFDRASIANMSEVEEPWTEKNNI 480
GLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTAEGFDRASIANMSEVEEPWTEKNNI
Sbjct: 421 GLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTAEGFDRASIANMSEVEEPWTEKNNI 480
Query: 481 NKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVGSRPPLGKKPPTPLARSSSARQSL 540
NKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVGSRPPLGKKPPTPLARSSSARQSL
Sbjct: 481 NKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVGSRPPLGKKPPTPLARSSSARQSL 540
Query: 541 TFAA 545
TFAA
Sbjct: 541 TFAA 544
BLAST of CmoCh06G000550 vs. ExPASy TrEMBL
Match:
A0A6J1I1L1 (protein PHYTOCHROME KINASE SUBSTRATE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470065 PE=4 SV=1)
HSP 1 Score: 974.2 bits (2517), Expect = 2.3e-280
Identity = 509/547 (93.05%), Postives = 523/547 (95.61%), Query Frame = 0
Query: 1 MERGATTSEMSFVH-EGLSHKPIFGCNHNDMRDRREASDTHSHHFLARCTIVDDSSELSI 60
MER ATTSEMSFVH EGLSHKPIFG NHND+RDRREASDTH HHFLAR TIVDDSSELSI
Sbjct: 1 MERRATTSEMSFVHDEGLSHKPIFGYNHNDLRDRREASDTHPHHFLARYTIVDDSSELSI 60
Query: 61 FDAKKYFNEVSTNNINKVSPMTSIEPMLMLKGQSEDQDSDKDSELSRSKPWTCGGVTPPS 120
FDAKKYFNEVSTNN+ +TSI+PMLMLKGQS DQDSDKDSELSRSKPWTCGGVTPPS
Sbjct: 61 FDAKKYFNEVSTNNL-----VTSIDPMLMLKGQSIDQDSDKDSELSRSKPWTCGGVTPPS 120
Query: 121 SVVASKFSPVVASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGAISVSVLRG 180
SVVASKFSP+VASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGAI VSVL G
Sbjct: 121 SVVASKFSPIVASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGAIFVSVLHG 180
Query: 181 DSSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQVHESKVILDPKARPFINNNNT 240
DSSPH QKK RKPPMSSSITGRWIFG+SKCPCIGKKS+QVHESKVILDPKARP+INNNNT
Sbjct: 181 DSSPHLQKKTRKPPMSSSITGRWIFGSSKCPCIGKKSIQVHESKVILDPKARPYINNNNT 240
Query: 241 T--KDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTHKCVPPNLLLQGPTTQRVIA 300
T KDKDN+SESESS+SSKKTSSDNTMFLQHSD NVIWST KCVPPNLLLQGPTTQRVIA
Sbjct: 241 TKDKDKDNFSESESSTSSKKTSSDNTMFLQHSD-NVIWSTQKCVPPNLLLQGPTTQRVIA 300
Query: 301 STSFSFPILKNKSNSNNEDHFSIRSIDPVLIQDPPRDSLEVFKPSSVKDDNGDNDQKSRI 360
STSFSFPILKNKSNSNNEDHFSIRSI+P+LIQDPPRDSLEVFKPSSVKD NGDND KSRI
Sbjct: 301 STSFSFPILKNKSNSNNEDHFSIRSINPILIQDPPRDSLEVFKPSSVKDGNGDNDLKSRI 360
Query: 361 LANVAATGGNATIISDTDDMASDASSDLFEIESFSTQTASTTTISYSSMFHRRDSMELEA 420
LANVAATGGNATIISD DDMASDASSDLFEIESFSTQTASTTTISYS+MFHRRDSMELEA
Sbjct: 361 LANVAATGGNATIISDIDDMASDASSDLFEIESFSTQTASTTTISYSNMFHRRDSMELEA 420
Query: 421 RRLGLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTAEGFDRASIANMSEVEEPWTEK 480
RRLGLNAA THCSLDEPMTPS+DWYEPSEASIDWSVTTAEGFDRASIANMSEVEEPWTEK
Sbjct: 421 RRLGLNAATTHCSLDEPMTPSSDWYEPSEASIDWSVTTAEGFDRASIANMSEVEEPWTEK 480
Query: 481 NNINKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVGSRPPLGKKPPTPLARSSSAR 540
NNINKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVGSRPPLGKKPPTPLARSSSAR
Sbjct: 481 NNINKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVGSRPPLGKKPPTPLARSSSAR 540
Query: 541 QSLTFAA 545
SLTFAA
Sbjct: 541 HSLTFAA 541
BLAST of CmoCh06G000550 vs. ExPASy TrEMBL
Match:
A0A1S4DUJ0 (protein PHYTOCHROME KINASE SUBSTRATE 4 OS=Cucumis melo OX=3656 GN=LOC103486831 PE=4 SV=1)
HSP 1 Score: 718.4 bits (1853), Expect = 2.3e-203
Identity = 410/568 (72.18%), Postives = 456/568 (80.28%), Query Frame = 0
Query: 1 MERGATTSEMSFVHEGLSHKPIFGC-NHNDMRDRREASDTHS------------HHFLAR 60
MER A TS+MS ++ GLS K +FG N+NDM+++RE ++T+S HHFLAR
Sbjct: 1 MERRA-TSKMSVINRGLSEKTVFGYNNNNDMKEKRETANTNSIPSYITHSDHQHHHFLAR 60
Query: 61 CTIVDDSSELSIFDAKKYFNEVS-TNNINKVSPMTSIEPMLMLK-------GQSEDQDSD 120
CTIVDDSSELSIFDAKKYFNEVS NNINKVSP+ +IE M M + S+DQDSD
Sbjct: 61 CTIVDDSSELSIFDAKKYFNEVSANNNINKVSPIMNIESMSMTEQCMDDSVASSQDQDSD 120
Query: 121 KDSELSRSKPWTCGGVTPPSSVVASKFSPVVASIDG-YRQSYRARSFHSTTPTASSEASW 180
KD ELS+SKPWTC GV PSS V SKFSP ASIDG +R+SYRARSFHS TPTASSEASW
Sbjct: 121 KDYELSKSKPWTC-GVAHPSSGVVSKFSPTTASIDGHHRRSYRARSFHSATPTASSEASW 180
Query: 181 NSQTGLLSNPPGAISVSVLRGDSSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQ 240
NSQTGLLSNPPGAISVSVLRGDS HS +K RKPP SSS+ RWIF +SKCPC GKKSVQ
Sbjct: 181 NSQTGLLSNPPGAISVSVLRGDSDHHSGRKTRKPPSSSSLAARWIFRSSKCPCTGKKSVQ 240
Query: 241 VHESKVILDPKARPFINNNNTTKDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTH 300
V ESKV+LDPK P+I NNTT + S+SE S S+KTS +NTM L H D +V+WS+
Sbjct: 241 VQESKVVLDPKTSPYI--NNTTVGGHSQSQSE-SPPSEKTSGENTMLLPHPDKDVVWSSQ 300
Query: 301 KCVPPNLLLQGPTTQRVIASTSFSFPILKNKSNSNNEDHFSIRSIDPVLIQDPPRDSLEV 360
+ PPNLLLQG TTQRVIAST F+FPILKN NN D R I VLIQDPPRDSLEV
Sbjct: 301 RRFPPNLLLQGHTTQRVIASTGFTFPILKN----NNGD-IPTRPIGHVLIQDPPRDSLEV 360
Query: 361 FKPSSVKD--DNGDNDQKSRILANVAATGGNATIISDTDDMASDASSDLFEIESFSTQTA 420
F PS+ +D ++G + KSRILA+VAA+GGNATI++D DD+ASDASSDLFEIESFSTQTA
Sbjct: 361 FNPSTARDSGNSGCSSLKSRILASVAASGGNATIVNDIDDVASDASSDLFEIESFSTQTA 420
Query: 421 STTTISYSSMFHRRDSMELEARRLGLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTA 480
STTT SY +MFHRRDSMELEARRLGL +AAT SLDEPMTPSTDWYEPSEASIDWSVTTA
Sbjct: 421 STTTASYPAMFHRRDSMELEARRLGLASAATRRSLDEPMTPSTDWYEPSEASIDWSVTTA 480
Query: 481 EGFDRASIANMSEVEEPWTEKNNINKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHV 540
EGFDRASIANMSE EE WTEKNN N NNN+RRRSSSGNGLLSCRSEKAVSVGPQPVTKHV
Sbjct: 481 EGFDRASIANMSEAEESWTEKNNNNNNNNNRRRSSSGNGLLSCRSEKAVSVGPQPVTKHV 540
Query: 541 GSRPPLGKKPPTPLARSSSARQSLTFAA 545
SRPPLGKKP PLARS+SA SLTFAA
Sbjct: 541 SSRPPLGKKP--PLARSNSAHLSLTFAA 556
BLAST of CmoCh06G000550 vs. ExPASy TrEMBL
Match:
A0A5A7UDB2 (Protein PHYTOCHROME KINASE SUBSTRATE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006070 PE=4 SV=1)
HSP 1 Score: 712.2 bits (1837), Expect = 1.6e-201
Identity = 404/559 (72.27%), Postives = 449/559 (80.32%), Query Frame = 0
Query: 10 MSFVHEGLSHKPIFGC-NHNDMRDRREASDTHS------------HHFLARCTIVDDSSE 69
MS ++ GLS K +FG N+NDM+++RE ++T+S HHFLARCTIVDDSSE
Sbjct: 1 MSVINRGLSEKTVFGYNNNNDMKEKRETANTNSIPSYITHSDHQHHHFLARCTIVDDSSE 60
Query: 70 LSIFDAKKYFNEVS-TNNINKVSPMTSIEPMLMLK-------GQSEDQDSDKDSELSRSK 129
LSIFDAKKYFNEVS NNINKVSP+ +IE M M + S+DQDSDKD ELS+SK
Sbjct: 61 LSIFDAKKYFNEVSANNNINKVSPIMNIESMSMTEQCMDDSVASSQDQDSDKDYELSKSK 120
Query: 130 PWTCGGVTPPSSVVASKFSPVVASIDG-YRQSYRARSFHSTTPTASSEASWNSQTGLLSN 189
PWTC GV PSS V SKFSP ASIDG +R+SYRARSFHS TPTASSEASWNSQTGLLSN
Sbjct: 121 PWTC-GVAHPSSGVVSKFSPTTASIDGHHRRSYRARSFHSATPTASSEASWNSQTGLLSN 180
Query: 190 PPGAISVSVLRGDSSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQVHESKVILD 249
PPGAISVSVLRGDS HS +K RKPP SSS+ RWIF +SKCPC GKKSVQV ESKV+LD
Sbjct: 181 PPGAISVSVLRGDSDHHSGRKTRKPPSSSSLAARWIFRSSKCPCTGKKSVQVQESKVVLD 240
Query: 250 PKARPFINNNNTTKDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTHKCVPPNLLL 309
PK P+I NNTT + S+SE S S+KTS +NTM L H D +V+WS+ + PPNLLL
Sbjct: 241 PKTSPYI--NNTTVGGHSQSQSE-SPPSEKTSGENTMLLPHPDKDVVWSSQRRFPPNLLL 300
Query: 310 QGPTTQRVIASTSFSFPILKNKSNSNNEDHFSIRSIDPVLIQDPPRDSLEVFKPSSVKD- 369
QG TTQRVIAST F+FPILKN NN D R I VLIQDPPRDSLEVF PS+ +D
Sbjct: 301 QGHTTQRVIASTGFTFPILKN----NNGD-IPTRPIGHVLIQDPPRDSLEVFNPSTARDS 360
Query: 370 -DNGDNDQKSRILANVAATGGNATIISDTDDMASDASSDLFEIESFSTQTASTTTISYSS 429
++G + KSRILA+VAA+GGNATI++D DD+ASDASSDLFEIESFSTQTASTTT SY +
Sbjct: 361 GNSGCSSLKSRILASVAASGGNATIVNDIDDVASDASSDLFEIESFSTQTASTTTASYPA 420
Query: 430 MFHRRDSMELEARRLGLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTAEGFDRASIA 489
MFHRRDSMELEARRLGL +AAT SLDEPMTPSTDWYEPSEASIDWSVTTAEGFDRASIA
Sbjct: 421 MFHRRDSMELEARRLGLASAATRRSLDEPMTPSTDWYEPSEASIDWSVTTAEGFDRASIA 480
Query: 490 NMSEVEEPWTEKNNINKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVGSRPPLGKK 545
NMSE EE WTEKNN N NNN+RRRSSSGNGLLSCRSEKAVSVGPQPVTKHV SRPPLGKK
Sbjct: 481 NMSEAEESWTEKNNNNNNNNNRRRSSSGNGLLSCRSEKAVSVGPQPVTKHVSSRPPLGKK 540
BLAST of CmoCh06G000550 vs. ExPASy TrEMBL
Match:
A0A0A0LBH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814370 PE=4 SV=1)
HSP 1 Score: 705.7 bits (1820), Expect = 1.5e-199
Identity = 406/572 (70.98%), Postives = 457/572 (79.90%), Query Frame = 0
Query: 1 MERGATTSEMSFVHEGLSHKPIFGC-NHNDMRDRREASDTHS------------HHFLAR 60
MER A TS+MS ++ GLS K +FG N+NDM+++RE ++T+S HHFLAR
Sbjct: 1 MERRA-TSKMSLINRGLSEKTVFGYNNNNDMKEKRETANTNSIPSYITHSDHQHHHFLAR 60
Query: 61 CTIVDDSSELSIFDAKKYFNEVS-TNNINKVSPMTSIEPMLMLKGQ---------SEDQD 120
CTIVDDSSELSIFDAKKYFNEVS NNINKVSP+ +I+ M M + S+DQD
Sbjct: 61 CTIVDDSSELSIFDAKKYFNEVSANNNINKVSPIMNIDSMSMSMSEQCMDHSVASSQDQD 120
Query: 121 SDKDSELSRSKPWTCGGVTPPSSVVASKFSPVVAS-IDG-YRQSYRARSFHSTTPTASSE 180
S+KD +LS+SKPWTC GV PSS V SKFSP AS IDG +R+SYRARSFHS TPTASSE
Sbjct: 121 SEKDYDLSKSKPWTC-GVAHPSSGVVSKFSPTTASTIDGHHRRSYRARSFHSATPTASSE 180
Query: 181 ASWNSQTGLLSNPPGAISVSVLRGDSSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKK 240
ASWNSQTGLLSNPPGAISVSVLRGDS HS +K RKPP SSS+ RWIF +SKCPC GKK
Sbjct: 181 ASWNSQTGLLSNPPGAISVSVLRGDSDHHSGRKTRKPPSSSSLAARWIFRSSKCPCTGKK 240
Query: 241 SVQVHESKVILDPK-ARPFINNNNTTKDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVI 300
SVQV ESKV+LDPK + P+I NNTT + S+SE S S+KTS +NTM LQH D +V+
Sbjct: 241 SVQVQESKVVLDPKTSPPYI--NNTTVGGHSQSQSE-SPPSEKTSGENTMLLQHPDKDVV 300
Query: 301 WSTHKCVPPNLLLQGPTTQRVIASTSFSFPILKNKSNSNNEDHFSIRSIDPVLIQDPPRD 360
W + + PPNLLLQG TTQRVIAST F+FPILKN N+NN R+I VLI+DPPRD
Sbjct: 301 WGSQRRFPPNLLLQGHTTQRVIASTGFTFPILKN--NNNNNGDIPTRAIGHVLIEDPPRD 360
Query: 361 SLEVFKPSSVKD--DNGDNDQKSRILANVAATGGNATIISDTDDMASDASSDLFEIESFS 420
SLEVF PSS +D + G + KSRILA+VAA+GGNATI++D DD+ASDASSDLFEIESFS
Sbjct: 361 SLEVFNPSSARDSGNGGCSSLKSRILASVAASGGNATIVNDIDDVASDASSDLFEIESFS 420
Query: 421 TQTASTTTISYSSMFHRRDSMELEARRLGLNAAATHCSLDEPMTPSTDWYEPSEASIDWS 480
TQTASTTT SY +MFHRRDSMELEARRLGL +AAT SLDEPMTPSTDWYEPSEASIDWS
Sbjct: 421 TQTASTTTASYPAMFHRRDSMELEARRLGLTSAATRRSLDEPMTPSTDWYEPSEASIDWS 480
Query: 481 VTTAEGFDRASIANMSEVEEPWTEKNNINKNNNHRRRSSSGNGLLSCRSEKAVSVGPQPV 540
VTTAEGFDRASIANMSE EE WTEKNN N NNN+RRRSSSGNGLLSCRSEKAVSVGPQPV
Sbjct: 481 VTTAEGFDRASIANMSEAEESWTEKNN-NNNNNNRRRSSSGNGLLSCRSEKAVSVGPQPV 540
Query: 541 TKHVGSRPPLGKKPPTPLARSSSARQSLTFAA 545
KHV SRPPLGKKP PLARS+SA SLTFAA
Sbjct: 541 MKHVSSRPPLGKKP--PLARSNSAHLSLTFAA 562
BLAST of CmoCh06G000550 vs. TAIR 10
Match:
AT5G04190.1 (phytochrome kinase substrate 4 )
HSP 1 Score: 82.0 bits (201), Expect = 1.6e-15
Identity = 146/504 (28.97%), Postives = 189/504 (37.50%), Query Frame = 0
Query: 52 DDSSELSIFDAKKYFNEVSTNNINKVSPMTSIEPMLMLKGQSEDQDSDKDSELSRSKPWT 111
++ +ELSIF+A+ YF+E +N+ SR +
Sbjct: 50 NEDTELSIFEARSYFSENGSND-------------------------------SRCQTRN 109
Query: 112 CGGVTPPSSVVASKFSPVVASIDGYRQSYRARSFHSTTPTASSEASWNSQTGLLSNPPGA 171
G +FS V S + SF + TASSEASWNSQTGLLSN
Sbjct: 110 LSG---------PRFSSVA--------SAKVSSF-TVGQTASSEASWNSQTGLLSNKN-- 169
Query: 172 ISVSVLRGDSSPHSQKKIRKPPMSSSITGRWIFGNSKCPCIGKKSVQVHESKV-ILDPKA 231
R S ++ +K P RW F CPC KSVQV ESK I PK
Sbjct: 170 ------RQGSDRDGRRSSKKGP-------RWFFRRRACPCSSSKSVQVQESKPRIAVPKT 229
Query: 232 RPFINNNNTTKDKDNYSESESSSSSKKTSSDNTMFLQHSDNNVIWSTHKCVPPNLLLQGP 291
D + S + SS + L N V S N + P
Sbjct: 230 -----------GSDRIVSNRIVHSHQTISSPEPIRLTIPSNTVTRSID--YTANKEARAP 289
Query: 292 TTQRVIASTSFSFPILKNKSN-SNNEDHFSIRSIDPVLIQDPPRDSLEVFKPSSVKDDNG 351
++FSFP L S S N + + I PV I+ V P+S K
Sbjct: 290 V-------SNFSFPTLNETSQLSENPKNPVLNHIKPVRIEPALLPIKPVLNPTSPKG--- 349
Query: 352 DNDQKSRILANVAATGGNATIISDTDDMASDASSDLFEIESFSTQTASTTTISYSSMFHR 411
+I D ++ SDASSDLFEIESFSTQTA+
Sbjct: 350 --------------------VIID-EEATSDASSDLFEIESFSTQTAARPWAP-----PV 401
Query: 412 RDSMELEARRLGLNAAATHCSLDEPMTPSTDWYEPSEASIDWSVTTAE-------GFDRA 471
RDSME G YEPSEAS+ WSV TAE F R
Sbjct: 410 RDSMEETVSEYG--------------------YEPSEASVTWSVMTAEPASAVAANFSRI 401
Query: 472 SIANMSEVEEPWTEKNNINKNNNHRRRSSSGNGLLSCRSEKAVSVG-----PQPVTKHVG 531
++++ S + +K GLL+C EKAV V QPV K VG
Sbjct: 470 ALSSSSTAFSGYDKKR---------------TGLLNCHCEKAVMVNGDKRLVQPV-KSVG 401
Query: 532 SRPPLGKKPPTPLARSSSARQSLT 542
+ + K L + S++ S+T
Sbjct: 530 VQNDVAGK---VLCNNGSSKLSVT 401
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FYE2 | 2.2e-14 | 28.97 | Protein PHYTOCHROME KINASE SUBSTRATE 4 OS=Arabidopsis thaliana OX=3702 GN=PKS4 P... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GDT3 | 8.4e-307 | 100.00 | protein PHYTOCHROME KINASE SUBSTRATE 4-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1I1L1 | 2.3e-280 | 93.05 | protein PHYTOCHROME KINASE SUBSTRATE 4-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A1S4DUJ0 | 2.3e-203 | 72.18 | protein PHYTOCHROME KINASE SUBSTRATE 4 OS=Cucumis melo OX=3656 GN=LOC103486831 P... | [more] |
A0A5A7UDB2 | 1.6e-201 | 72.27 | Protein PHYTOCHROME KINASE SUBSTRATE 4 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A0A0LBH5 | 1.5e-199 | 70.98 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814370 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G04190.1 | 1.6e-15 | 28.97 | phytochrome kinase substrate 4 | [more] |