CmoCh06G000520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein PLANT CADMIUM RESISTANCE 10-like
Location	Cmo_Chr06: 325936 .. 328690 (+)
RNA-Seq Expression	CmoCh06G000520
Synteny	CmoCh06G000520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTAAAAAGAAATAGAAAAAGGAGTAAAAAGCGAAACCCACCGCCATTTCTCTCTCCGGCGCGATACAATTTAGCTACGAATACAAGGATTAGAACATCCCAAGATCTCCCCCGATCGCATCCACATTCCTTCCGTTTCATTCCCGCCGTGCCCTCCCGGTGAAGAAGACAATCAAACACGACATCCATCTCCTGCTTTGATCCACAGGTTCATCCTCGTTTGGGTTCTTCGCTGCTATTCTATTTTAACTCTTTACGCATACCGAACAAACATCTTCGATTTAGGAACTCCAAAACCTAATGGTGTTTCTTAATGTTACTTAATGTTATCTTACTATGAAGTTTTTGTGGCGTTTTTGGGCGTTTCTCATTCCAATGCTCGTTTTTCATGTTGAGCCCTTGAAAAATTTTAGCTCCATTTTTCTTTCCGTATATGGTTTACATCCTGGTTTTAGTTGAGGATTCATCGGATCAGATGAAGTGTGCAAAAGGAATTAGTAGATCGAAGTGTAAAAATCATGTGTAAGTGAGGGGAGGGTAAAATGTAGGTTTTATGAATTGCATTTTTGATGATTCTTAATGAAGCTTACAGGTTGGATTCGTTTGAAAGAGATTGGGAGGGATTTTGTTGTGCATCAGAGCTAGATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTACGCTACTTCCTGCCTTCTGACCTTGATTTATGCGAAGGAAAAGTTATGAAGGTGCATCTTGAGTATAGAAAGGAAATGTATCATTACTTTGCATGTGTTCTTATATCAAATTGATAAATATTTGAATTGTAGGCCAATGGCTGTTTCGATTAGGGAACCCATCATATCCTGTTGTGAAAGCTTGCTCTGCCATTTATTTGTTGAGTTTTCTAGATCCAAGGAAGCGCTGAATTTTTCACTATGATTAGGTTTATTATAGGAAACCTGATCAGCCCTAAATGATGGGCATAGAGCGTGAAGAACTTTGATTAGTTCTCTAACATGTTCATGTTGTAGTATCAATTAGAGTCCCCAGTTTCAATCATCGAAGTGTGTATAAAGATTCGGACAGTTGATCTTTTGCGCCTTTAATTTTTTAGATACCAAACAGAATTTAGATAACATGATGATTTTATACGAATCTCTTTTTATATTTTTGGTGGTGGTTGAATATTACTATCAAGTCAAAGAGCATTGCATTTAAAATGATCTCGCATGTTAAATGGGAAGCTCATTGCAACTTTTCTTGGCGCAGGTTTTATTGGCCTTGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCCTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGTATTATATCGTACTCTTATTACTTTTTCATTGTTCATTGTCTTGGAAGCATGAATTATTTACAGATTATATATGGCACATAGCATTTATAAACGATGTTATGCATTAATCTTTTCTCCTGATGGCCAAGAGAATTCGAAGTTTTAAGTGGCTTTTTTCTTTACATTTGTCTCTGACACAAGACTGGGAGTTAGTTCTAATGTAACGACCCGACTTTTCGTACATATAGCGATCAGAGCCGTTATAAATGGTATCAAAGCCAAACACCAAGCAGTGTGCTAGCGAGGACGCTGGATCCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCTCTAACAAATGCGTTCTAAAATCTTGAGGAGAAGCCCTTGAAGGGAAAGCCCAGAGGACAATATCTGCCTGCGGTGAGTTTGGAAGGTTACAAAAGCATTCCTTTTAAGGTGTGAAAACCTAAAGACATTTTAAATCTTTGAGGGGAAGCCCTTGAAGGAAAAGCCTAAAAGACCTATGGGTAGGTTTGGGTTGTTACATCTAATGCCTTTATCCTCCATGGAATATAGCCCAGCTCACTACAAGTTCTCTAGTCAATGAATTGAGTTGCGGATTGCTATGCTTCCATGAGCCACACCTAATAATCTCCGAAATGTGATGCAGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAGTTCCTTAATTGCTGGAGCTACCGAGAAATACCGGTAACTTGTTAGATTTGCTCGCTTAGCACCCAGTTCTTTCTTTCCCTCTTTTGTTCTTACTGGACTTTTCAGAGTTTCTTCTTTCCCTCTTTTTTTATTATGAGATTTCCCCCCCTTCTTTCGTCTATTTAACATTGTAGTATTATTAGAAATTCAGTCCTACTAGTGATTGATAAAATTATGTTTTAAACATGAGTTATAATGATTGGTAAATTGATATTAAATA

mRNA sequence

TGTTAAAAAGAAATAGAAAAAGGAGTAAAAAGCGAAACCCACCGCCATTTCTCTCTCCGGCGCGATACAATTTAGCTACGAATACAAGGATTAGAACATCCCAAGATCTCCCCCGATCGCATCCACATTCCTTCCGTTTCATTCCCGCCGTGCCCTCCCGGTGAAGAAGACAATCAAACACGACATCCATCTCCTGCTTTGATCCACAGGTTGGATTCGTTTGAAAGAGATTGGGAGGGATTTTGTTGTGCATCAGAGCTAGATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTTTTATTGGCCTTGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCCTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAGTTCCTTAATTGCTGGAGCTACCGAGAAATACCGGTAACTTGTTAGATTTGCTCGCTTAGCACCCAGTTCTTTCTTTCCCTCTTTTGTTCTTACTGGACTTTTCAGAGTTTCTTCTTTCCCTCTTTTTTTATTATGAGATTTCCCCCCCTTCTTTCGTCTATTTAACATTGTAGTATTATTAGAAATTCAGTCCTACTAGTGATTGATAAAATTATGTTTTAAACATGAGTTATAATGATTGGTAAATTGATATTAAATA

Coding sequence (CDS)

ATGGATGGCGGAATAAGTTATGTCCCTCCTGCATATGTTCCTCTAGGGCAGTCTGATTCAGAAGCGGAGATTATTTCCAGAGATGAGGGCAGCCATTCCACACCTAATGAACTTAAGGATGGATTGTCACAATGGTCGTCTGGAATATGTGCGTGCTGCGATGATATGCAGAGCTGTTTTATTGGCCTTGTTTGTCCATGCTTTCTGTTTGGGAAGAATGCTGAACTTTTGGGTTCTCGAACAATGTTTGGGTCATGCGCAACTCATTTCATTTTGTGGGCACTTACGAATACAGTCTGCTGCCTGTTGACTGATGGACTTTTCTTGAATCTACCTGGATGCGTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTACGGTCTAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTTGTGACCCACTTTTTCTGCCATTTCTGCGCTATCTGTCAAGAATACAGAGAGATTCGTGAAAGAGCTAGAGGATCCGGTCCCCATGATTTGAGTTTGGCTGTTGTTACCCCGCCAACAACTCAAACAATGGATTCTAACCCAGAAAAATAG

Protein sequence

MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMDSNPEK

Homology

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BLAST of CmoCh06G000520 vs. ExPASy Swiss-Prot
Match: Q8S8T8 (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.7e-67
Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 7   YVPPAYVPLGQSDSEAEIISRDEGSHSTPNE-LKDGLSQWSSGICACCDDMQSCFIGLVC 66
           YVPP+Y+PL QSD++ E+ +         +E  KD   QWSSGICAC DDMQSC +GL C
Sbjct: 8   YVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVGLFC 67

Query: 67  PCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRK 126
           PC++FGKNAELLGS T  G C TH I WAL NT+CC  T+G  L LPGC ++CYACGYRK
Sbjct: 68  PCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACGYRK 127

Query: 127 ALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMD 186
           +LR+KYNL EAPCGDFVTHFFCH CAICQEYREIRE++ GS P D+ +A+   P  QTM+
Sbjct: 128 SLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQTME 187

[Close]

BLAST of CmoCh06G000520 vs. ExPASy Swiss-Prot
Match: B4FF80 (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.5e-62
Identity = 113/186 (60.75%), Postives = 131/186 (70.43%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           M G  SYVPP Y+PL   D+E + +   E +H+T  +L    +QWSSGICAC DD QSC 
Sbjct: 1   MAGKGSYVPPQYIPLYSLDTEEDRVPAVEENHATRPKLNQDPTQWSSGICACFDDPQSCC 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IG +CPCFLFGKNA+ LGS T+ GSC TH +LW L  ++CC+ T GL L +PG  +ACYA
Sbjct: 61  IGAICPCFLFGKNAQFLGSGTLAGSCTTHCMLWGLLTSLCCVFTGGLVLAVPGSAVACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER-ARGSGPHDLSLAVVTPP 180
           CGYR ALR+KYNLPEAPCGD  TH FCH CAICQEYREIRER   GS P       VTPP
Sbjct: 121 CGYRSALRTKYNLPEAPCGDLTTHLFCHLCAICQEYREIRERTGSGSSP----APNVTPP 180

Query: 181 TTQTMD 186
             QTMD
Sbjct: 181 PVQTMD 182

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BLAST of CmoCh06G000520 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.9e-19
Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 42  LSQWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCC 101
           ++ WS+G+C C DD  +C +  VCPC  FG+ AE++   +   SC T   L+AL      
Sbjct: 44  VAAWSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGST--SCGTSGALYALV----- 103

Query: 102 LLTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRE 161
                  + L GC    Y+C YR  +R++Y L  +PC D   H  C  CA+CQEYRE+++
Sbjct: 104 -------MLLTGC-QCVYSCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCALCQEYRELKK 149

Query: 162 R 163
           R
Sbjct: 164 R 149

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BLAST of CmoCh06G000520 vs. ExPASy Swiss-Prot
Match: Q9LS43 (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 44  QWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLG-SRTMFGSCATHFILWALTNTVCCL 103
           QW+SG+ +C +D ++  +   CPC  FG+ A++    RT  G C   + L      +CC+
Sbjct: 4   QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGL------ICCV 63

Query: 104 LTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER 163
                 + LP      ++C YR  +RSK+ LPE+P  D VTHFFC  CA+CQE+RE++ R
Sbjct: 64  ------VGLP----CLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTR 123

Query: 164 ARG-----SGPHDLSLAVVTPPTTQTM 185
                   SG    ++A   PP +Q M
Sbjct: 124 GLDPSIGWSGNMQRTMA---PPMSQQM 131

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BLAST of CmoCh06G000520 vs. ExPASy Swiss-Prot
Match: Q9M9A5 (Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.4e-18
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 9   PPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVCPCF 68
           PP Y+    + ++   +S     H+ P       S W+SG+  C +D ++  I    P  
Sbjct: 59  PPTYINQSATFNQPYGVSMAGPVHTQP-------SNWTSGLFDCMNDGENALITCCFPFV 118

Query: 69  LFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRKALR 128
            FG+ AE++       SC T  +L+ L   +CCL        +P CV   Y C +R  LR
Sbjct: 119 TFGQIAEVIDEGAT--SCGTAGMLYGL---ICCLFA------IP-CV---YTCTFRTKLR 178

Query: 129 SKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER 163
           SKY LP+AP  D++TH FC +CA+CQEYRE++ R
Sbjct: 179 SKYGLPDAPAPDWITHCFCEYCALCQEYRELKNR 190

[Close]

BLAST of CmoCh06G000520 vs. ExPASy TrEMBL
Match: A0A6J1GI45 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111454399 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.1e-111
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA
Sbjct: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180

Query: 181 TQTMDSNPEK 191
           TQTMDSNPEK
Sbjct: 181 TQTMDSNPEK 190

[Close]

BLAST of CmoCh06G000520 vs. ExPASy TrEMBL
Match: A0A6J1I689 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC111470294 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.1e-109
Identity = 188/190 (98.95%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDGGISYVPPAYVPLGQSDSEAEIISRDEG HSTPNELKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGIHSTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180

Query: 181 TQTMDSNPEK 191
           TQTMDSNPEK
Sbjct: 181 TQTMDSNPEK 190

[Close]

BLAST of CmoCh06G000520 vs. ExPASy TrEMBL
Match: A0A1S3B7G5 (protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 166/189 (87.83%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDG  SYVPPAYVP+ QSDSE EIISRDE S+ TPN+LKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGPRSYVPPAYVPISQSDSETEIISRDE-SNPTPNQLKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNAELLGS+T+FGSCATHFILWALTNTVCCLL+DGL  N+PGC LACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSQTIFGSCATHFILWALTNTVCCLLSDGLLWNVPGCFLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERA GSG H+L+L VVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGSGSHELNLTVVTPPT 180

Query: 181 TQTMDSNPE 190
           TQTM+SNPE
Sbjct: 181 TQTMESNPE 188

[Close]

BLAST of CmoCh06G000520 vs. ExPASy TrEMBL
Match: A0A0A0LH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.7e-95
Identity = 166/189 (87.83%), Postives = 174/189 (92.06%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDG  SYVPPAYVP+ QSD EAEI SRDE S+ TPNELKDGLSQWSSGICACCDDMQSCF
Sbjct: 1   MDGPRSYVPPAYVPISQSDLEAEISSRDE-SNPTPNELKDGLSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLL+DG+  N+PGC LACYA
Sbjct: 61  IGLFCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLSDGILWNVPGCFLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERA G G H+L+L VVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGYGSHELNLTVVTPPT 180

Query: 181 TQTMDSNPE 190
           TQTM+SNPE
Sbjct: 181 TQTMESNPE 188

[Close]

BLAST of CmoCh06G000520 vs. ExPASy TrEMBL
Match: A0A6J1F1V0 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111441625 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 159/190 (83.68%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MDGGISYVPPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCF 60
           MDG  SYVPPAYVP+GQS SEAEIIS+DEG H  PNEL D LSQWSSGICACCDDMQSCF
Sbjct: 1   MDGHRSYVPPAYVPIGQSVSEAEIISKDEG-HPIPNELNDELSQWSSGICACCDDMQSCF 60

Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           IGL CPCFLFGKNA LLGSRTMFGSCATHFILWAL N VCCL TDG   N+ GC LACYA
Sbjct: 61  IGLCCPCFLFGKNAALLGSRTMFGSCATHFILWALMNAVCCLSTDGALWNVAGCFLACYA 120

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRKALRSKYNLPEAPCGDF+THFFCH CAICQEYREIRERA GS   +L+LAVVTPPT
Sbjct: 121 CGYRKALRSKYNLPEAPCGDFLTHFFCHCCAICQEYREIRERAGGSSSRELNLAVVTPPT 180

Query: 181 TQTMDSNPEK 191
           TQTM+SNP+K
Sbjct: 181 TQTMESNPQK 189

[Close]

BLAST of CmoCh06G000520 vs. TAIR 10
Match: AT2G40935.1 (PLAC8 family protein )

HSP 1 Score: 255.0 bits (650), Expect = 4.8e-68
Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 0


Query: 7   YVPPAYVPLGQSDSEAEIISRDEGSHSTPNE-LKDGLSQWSSGICACCDDMQSCFIGLVC 66
           YVPP+Y+PL QSD++ E+ +         +E  KD   QWSSGICAC DDMQSC +GL C
Sbjct: 8   YVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGICACFDDMQSCCVGLFC 67

Query: 67  PCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRK 126
           PC++FGKNAELLGS T  G C TH I WAL NT+CC  T+G  L LPGC ++CYACGYRK
Sbjct: 68  PCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACGYRK 127

Query: 127 ALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMD 186
           +LR+KYNL EAPCGDFVTHFFCH CAICQEYREIRE++ GS P D+ +A+   P  QTM+
Sbjct: 128 SLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQTME 187

[Close]

BLAST of CmoCh06G000520 vs. TAIR 10
Match: AT2G40935.3 (PLAC8 family protein )

HSP 1 Score: 224.9 bits (572), Expect = 5.3e-59
Identity = 104/181 (57.46%), Postives = 126/181 (69.61%), Query Frame = 0


Query: 7   YVPPAYVPLGQSDSEAEIISRDEGSHSTPNE-LKDGLSQWSSGICACCDDMQSCFIGLVC 66
           YVPP+Y+PL QSD++ E+ +         +E  KD   QWSSG            +GL C
Sbjct: 8   YVPPSYIPLTQSDADTEVETTTPNLEIAVSESTKDDPRQWSSGC-----------VGLFC 67

Query: 67  PCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRK 126
           PC++FGKNAELLGS T  G C TH I WAL NT+CC  T+G  L LPGC ++CYACGYRK
Sbjct: 68  PCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYACGYRK 127

Query: 127 ALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPTTQTMD 186
           +LR+KYNL EAPCGDFVTHFFCH CAICQEYREIRE++ GS P D+ +A+   P  QTM+
Sbjct: 128 SLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPLAQTME 177

[Close]

BLAST of CmoCh06G000520 vs. TAIR 10
Match: AT2G40935.2 (PLAC8 family protein )

HSP 1 Score: 199.5 bits (506), Expect = 2.4e-51
Identity = 85/126 (67.46%), Postives = 100/126 (79.37%), Query Frame = 0


Query: 61  IGLVCPCFLFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYA 120
           +GL CPC++FGKNAELLGS T  G C TH I WAL NT+CC  T+G  L LPGC ++CYA
Sbjct: 39  VGLFCPCYIFGKNAELLGSGTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSCYA 98

Query: 121 CGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERARGSGPHDLSLAVVTPPT 180
           CGYRK+LR+KYNL EAPCGDFVTHFFCH CAICQEYREIRE++ GS P D+ +A+   P 
Sbjct: 99  CGYRKSLRAKYNLQEAPCGDFVTHFFCHLCAICQEYREIREQSSGSYPLDMKMAITNAPL 158

Query: 181 TQTMDS 187
            QTM+S
Sbjct: 159 AQTMES 164

[Close]

BLAST of CmoCh06G000520 vs. TAIR 10
Match: AT3G18470.1 (PLAC8 family protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 44  QWSSGICACCDDMQSCFIGLVCPCFLFGKNAELLG-SRTMFGSCATHFILWALTNTVCCL 103
           QW+SG+ +C +D ++  +   CPC  FG+ A++    RT  G C   + L      +CC+
Sbjct: 4   QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGL------ICCV 63

Query: 104 LTDGLFLNLPGCVLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER 163
                 + LP      ++C YR  +RSK+ LPE+P  D VTHFFC  CA+CQE+RE++ R
Sbjct: 64  ------VGLP----CLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTR 123

Query: 164 ARG-----SGPHDLSLAVVTPPTTQTM 185
                   SG    ++A   PP +Q M
Sbjct: 124 GLDPSIGWSGNMQRTMA---PPMSQQM 131

[Close]

BLAST of CmoCh06G000520 vs. TAIR 10
Match: AT1G49030.1 (PLAC8 family protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 9   PPAYVPLGQSDSEAEIISRDEGSHSTPNELKDGLSQWSSGICACCDDMQSCFIGLVCPCF 68
           PP Y+    + ++   +S     H+ P       S W+SG+  C +D ++  I    P  
Sbjct: 59  PPTYINQSATFNQPYGVSMAGPVHTQP-------SNWTSGLFDCMNDGENALITCCFPFV 118

Query: 69  LFGKNAELLGSRTMFGSCATHFILWALTNTVCCLLTDGLFLNLPGCVLACYACGYRKALR 128
            FG+ AE++       SC T  +L+ L   +CCL        +P CV   Y C +R  LR
Sbjct: 119 TFGQIAEVIDEGAT--SCGTAGMLYGL---ICCLFA------IP-CV---YTCTFRTKLR 178

Query: 129 SKYNLPEAPCGDFVTHFFCHFCAICQEYREIRER 163
           SKY LP+AP  D++TH FC +CA+CQEYRE++ R
Sbjct: 179 SKYGLPDAPAPDWITHCFCEYCALCQEYRELKNR 190

The following BLAST results are available for this feature:

BLAST of CmoCh06G000520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8T8	6.7e-67	62.98	Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=...	[more]
B4FF80	8.5e-62	60.75	Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1	[more]
B6TYV8	8.9e-19	38.02	Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1	[more]
Q9LS43	2.0e-18	36.05	Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 ...	[more]
Q9M9A5	3.4e-18	35.71	Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 ...	[more]

BLAST of CmoCh06G000520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI45	6.1e-111	100.00	protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I689	1.1e-109	98.95	protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A1S3B7G5	1.2e-95	87.83	protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4...	[more]
A0A0A0LH64	4.7e-95	87.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1	[more]
A0A6J1F1V0	1.3e-89	83.68	protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CmoCh06G000520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40935.1	4.8e-68	62.98	PLAC8 family protein	[more]
AT2G40935.3	5.3e-59	57.46	PLAC8 family protein	[more]
AT2G40935.2	2.4e-51	67.46	PLAC8 family protein	[more]
AT3G18470.1	1.4e-19	36.05	PLAC8 family protein	[more]
AT1G49030.1	2.4e-19	35.71	PLAC8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	TIGRFAM	TIGR01571	TIGR01571	coord: 43..160 e-value: 3.5E-36 score: 122.1
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 45..158 e-value: 3.0E-25 score: 88.9
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	DUF614 FAMILY PROTEIN-RELATED	coord: 5..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..190
None	No IPR available	PANTHER	PTHR15907:SF177	PROTEIN PLANT CADMIUM RESISTANCE 10	coord: 5..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000520.1	CmoCh06G000520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane