Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGACCAGACCTTGGCTAGGGTTTGGGTTGTATTAGGACCTCATTTTGGCGCGTCTGCAAAATTTGCAAGTTCGCAACGAAGCCTTGGCATGCTCTGATTCTCAGGCAACTTACTCTCGACCACCCATGGCGTGTAATTCTTCAGCCTGCCAGTCCAACTGCTATAGAAATCAAGATGACGAGGCAACAGTCGAACAAGATTCACTTCGAACAAACAAGGCCGATCGATTAGCCGCCACGAACGGAGACAGTGGTGATACGCATCTCTGCTTTAAATGCAAGGCCAAGGAGCGCATGTCTAGCTCTGAAGAAGGAGACGATGGGCGCTTTTGCAGCGATTGCTTTCGGAGCAACTTGTTTGCAAAGTTCCGGCAGGCTGTAAACTCGAACGCCATGATCTCTCCTTCTGATAAAGTGCTTGTTGCCTTCTCCGGGGGTCCTTGTTCCAGGTCCTTCCTCTTTTTAGACTAATTGTATTTATATTTTCTCTTGTAATGTATTGGTTCATGGCTGTGGGTACGCAGGGAACTTCGTTTTGGATGTTGCGAGTGGACTTGACAGTTTTCAGACTGATTATTTAGTTAGAATCCCGAGCGCTATTGATATTCTCACGTCTTTCTGTTATTTGTGTGACTCTTTCTGCAGATTGGTTCAAAAGATTTGCAGTTTGTGTATAGTTATTAAGATCCTTGAGCAGGCCTCTAGGTTTATTTGTAGTTAACATGAGTCAATCAATTTTATTTGGTCTAAATTTGAGCACTAATGAAACTTACTTTGTGGCCCAAAATTTATTTGGTCAGCATGGCGATTAGTCTATTATCTATCTCAGCATGTCCATTGATGGTAACCCCAATAACGCAGCTTTCTGAGCGCCAATGAAACCACTTTTCATTAATGAACTCAAAATCATGTTTAGATACGATAAGAACTAAAGTAACTACCTAGAATTTCTTTGACCATTAAAGTGCTTTGCTATCATCGTGCAAACATATTATGTGCTATCCTTTGCCAATACTTCAAGGAAGAACTTAATGAGTTATATTAACATGAACTTAGCTTAGTGGTTAGGACATTATTCTTCCTCTAAGAGGCTGCATACTTCTTAAGTGCTATCCTTTGCCAATACTTCAAGGAAGAACTTAATAAGCTATATTAACATGAGCTTAGCTCAGCTGTTAAGGTATTCTACTTCCTCTAGGAGGTTGCGGGTTTGAATCCTCTCATTCTACATTTGTTTCATTATTTATCGAGTTGAATTATTTTCTACCTCTTAGTGATAGAGTTAAAGTGCACAACTTTATATGATCAATGTGGGATATGATTCGTAAGCTGTTTTTTCTTATAAGATAGCTAGAAGAACTGAACTGATTAACATCTTGATAGCTCCTTTTTTTTTTTTGGTATGAACATCATGATAGCTCTTAGTGATGAATGATCTGGTATTCCTTTAGAAAGTCACTTATACAATTATTTAATCGGATTTTTTTATTACCAATTTATCTTGGATGCACTGGAAACTGTCCATGATCTAAGAGACTGACGCTCCCCTTTCCCAATAAAACTTCCAGGGTGGCTTTGCAATTTGTTCATGAGATGCAAGTTAAAGCACACAAAAATTTTGAAGCAAGTAGGGATAGATCACTGCAAGTTTTTGGTGTTGGAGTTGCTTATATTGATGAAACCTCTGCTTGTCCTATCCCTTTGCATGAGATAGACAGAACAATTCAAACCATCCAATCAGTTGTGTCAAGTCTATCTCCACCGATAAAAGATTTGCATATTGTTCAAATTGAGAGTGTATACTCTTCAAATTTGAGTGACGGAAGGGAGAAGTTGAAGAAGTTGTTAGATACAGTCAGTGATGTCACAGGAAAGGAAGACCTTATCTCACATTTGCGGATGTTATCCTTGCAAAAAGTTTGCTCCTCAACTTATTCCTTCAATTAGCTTGCAATCAAAGAGAGGGAAATTCTTAGTCCTATTGTTTGTTATGCAGATTGCCGCTGAAAATGGATACAACAGACTTGTACTTGGGACATGTACTTCAAGGATTGCTTGCCATGTGATTTCTTCCACTGTTAAGGTTTTTCTTCAGCTGTTAAGCATACATCTACATATTTTAGTTTTAAGCAATTAATTTGAATATTCAATTACTAGTGTTTTCGGACTCATGATATTGACCGACCAGAATGAAGGTTATAAGGGTGGTGCATTGCTATTGGATCATTAAGTATGAGCTTGGCAATTGTGGACTTTTAATTTTAATTTAGGCATGGCTGCCACTACACTCTGCAGGAAAAATTGATGCTTTGGGGTGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGTGCATTGTGCCTTTTTGGAGACACCTCTATTAAAATATAGAAAATAGCTAGGGTAGCTATGGAATTTTATTATGTATTATTCTGTTGCTTTGAATTTTACTGCTAATTATTGTTACAAGCTGCTTATTTTGTTCTGTTATCCAAATCTTCCCATTTGGGATAGGTCCATGCACTGAGTATGACTTTGCTATTTTAATTCAATCAGGGCCAAGGATATTCCTTACCGGCAGATATACAGTATGTTGATGCAAGGTGGGAGGTCCCAGTGGCACTTCCTCTACGTGATTGTCTTGCACAAGAGCTCAACATGCTTTGCTGTGCTGATGGGTCTGTATTTGTTAGGTTTATCACCAGAATGAATTCTTGGTTAACTTTGTCCTGTTTAGTTCTTTACCGCTGTTAATTTTGCTTGTAGTCGTTGCATCATTTATTTGCACACTTCAAATGAATCTAACTGATGATAAGATCTGGTTCTTGGCAGGGCAGTCTAAAGACAGAGGAACTGACCAAAACATCCTTTTCTGGCATCAATGACTTGGTCTCATCATTTGTGGCTCTATTGCAGGTACAAGTAGGAAGTTGATTTAGAAAAATATGCAGTTTTGTGCATTTTAGCTTAGGAGAACGACCTTTGTGAAGGGTAACTAATCTGTTGAATCAGTGCTGTGTGCAGCGATAAGACATGTTTGTGTGTTCAATTTATGAGCAATTTTGGTTGGGCATGGAAACAATTAAATTTCTAACGGAACTGCTTTAATTTCACCTTCTAGTTCAAGTGATTGTTTCCGAGTAAGAAAGAAAATGCATCTACGAGTTGTAAGGCCACTTGTCCTTCCCAGGACTGTTTTGCAGAACTTGACTGAAGAAATTTTGTTATACTTTCTTTTATAGGAAGAGAATCCCTCTCGTGAGTCTACAATTGTGAGAACTGCTGGCAAGCTTACTCCATTCAACTTTAGCAGAATTCCAGATTTGAATGAAAGTAATGGTGTTCCTTTGGCCACCAAAAGGCGTCAAAAGAGAAATAACTTTAAGCATGTTAACTCTTTATCATCGGAAACATTTTGTGCAGTCTGCAATGGTCCACTTAACATGTCCGATGTGCAAACTTTAAGAAGTTTTGAAGCTGGCCAGGTAAGTTCAATTTTGGCTGGTACCTGTTGTTCAAGTTGTCAATTTCAGATTCTTCCCAAGGATTCCATATCGCAAGAACTTCTTCTTTCACTCTTGCCACCCTCTATGGTTGCTCGAGCAATGCATGGCAGCCCTAGCAATTCCAATTCGCTAAGGTGAGGTTAAGTCTTGTATTACTGTTGGTACTATGAAGGAAAAAGGATAGTGCAAGTTTATGAGAACTGAATTTTGTATTCTAAATCTCTGTTGTATATCATCTTCCCACAAGGCTTTTTCCCTTGGATACTGAACCTGGGCATATCAAAAAAAGTTAAAAGTAGAATAAGATAAATTAAACAACTTCCAGCCTGTGTTTGTATGTTTCTTAAAATGTCTGTATTAAGTCATTTTAGATGGACTTGATGAAATTACTGAAATATTGTTGTTGTTTCATGTAGTTGTATGCTTAAAGTGCGTAGTAGCATGCAGTCTCCTTCAGACATCACTATGTTGAGCTCATTAAGTATTACTTTCAAAATATTCAAGCTGAGTATTTCTGTTCTTAATCGCAGGGAGCAAATACAGGAATTCTTGCTGTCAGATGATGAAGTCGAATCGTAATCCAGGTTAACAACTAGCAAAATTGCCTTCTCTCAACAATGATAATTATACGTGCATTTGTAGAATTTATGGGACGATATCGACTTTTCTTCTCTTAGCTGCGGTTTGCTTTCTTTTTGTCTGTTGCATTCAGTTCATTTATATAGAAACAGATTCTTTTACACTCTGGTATATGCTTCTATTTTAGGTTCCTAACATATGCTAGACTGCCTGATTATTCATCACATAAAATGCTGATTATGAAAAATCTTTTAATGTTTAATTCAAGCATCCTGCAAGTGCTTGGATGGAGTAGTAGACGATTAGCCTTCGGAGATTTTACCCCCAACTAATGAGAAGTGGCATCCAATCAGTAGAACTGAGACAGGTATTGAGCCTTACCTGTCATAACGTCTCATGATCATGATACTAAATGAGTAAACTAAACGAGTAATTACTGAAATCATTTTTTCAGGATAGTAGCATGCATGAAAACTCATGATTGACTTTTCAATGTACATAACAATTCTACATGGGAACATCACATTCATCATATTAGCATAAATGTTTAATTTCCCTTTTTCAAGTTTA
mRNA sequence
ATGGCAACTTACTCTCGACCACCCATGGCGTGTAATTCTTCAGCCTGCCAGTCCAACTGCTATAGAAATCAAGATGACGAGGCAACAGTCGAACAAGATTCACTTCGAACAAACAAGGCCGATCGATTAGCCGCCACGAACGGAGACAGTGGTGATACGCATCTCTGCTTTAAATGCAAGGCCAAGGAGCGCATGTCTAGCTCTGAAGAAGGAGACGATGGGCGCTTTTGCAGCGATTGCTTTCGGAGCAACTTGTTTGCAAAGTTCCGGCAGGCTGTAAACTCGAACGCCATGATCTCTCCTTCTGATAAAGTGCTTGTTGCCTTCTCCGGGGGTCCTTGTTCCAGGGTGGCTTTGCAATTTGTTCATGAGATGCAAGTTAAAGCACACAAAAATTTTGAAGCAAGTAGGGATAGATCACTGCAAGTTTTTGGTGTTGGAGTTGCTTATATTGATGAAACCTCTGCTTGTCCTATCCCTTTGCATGAGATAGACAGAACAATTCAAACCATCCAATCAGTTGTGTCAAGTCTATCTCCACCGATAAAAGATTTGCATATTGTTCAAATTGAGAGTGTATACTCTTCAAATTTGAGTGACGGAAGGGAGAAGTTGAAGAAGTTGTTAGATACAGTCAGTGATGTCACAGGAAAGGAAGACCTTATCTCACATTTGCGGATGTTATCCTTGCAAAAAATTGCCGCTGAAAATGGATACAACAGACTTGTACTTGGGACATGTACTTCAAGGATTGCTTGCCATGTGATTTCTTCCACTGTTAAGGGCCAAGGATATTCCTTACCGGCAGATATACAGTATGTTGATGCAAGGTGGGAGGTCCCAGTGGCACTTCCTCTACGTGATTGTCTTGCACAAGAGCTCAACATGCTTTGCTGTGCTGATGGTCTAAAGACAGAGGAACTGACCAAAACATCCTTTTCTGGCATCAATGACTTGGTCTCATCATTTGTGGCTCTATTGCAGGAAGAGAATCCCTCTCGTGAGTCTACAATTGTGAGAACTGCTGGCAAGCTTACTCCATTCAACTTTAGCAGAATTCCAGATTTGAATGAAAGTAATGGTGTTCCTTTGGCCACCAAAAGGCGTCAAAAGAGAAATAACTTTAAGCATGTTAACTCTTTATCATCGGAAACATTTTGTGCAGTCTGCAATGGTCCACTTAACATGTCCGATGTGCAAACTTTAAGAAGTTTTGAAGCTGGCCAGGTAAGTTCAATTTTGGCTGGTACCTGTTGTTCAAGTTGTCAATTTCAGATTCTTCCCAAGGATTCCATATCGCAAGAACTTCTTCTTTCACTCTTGCCACCCTCTATGGTTGCTCGAGCAATGCATGGCAGCCCTAGCAATTCCAATTCGCTAAGGGAGCAAATACAGGAATTCTTGCTGTCAGATGATGAAGTCGAATCGTAATCCAGCATCCTGCAAGTGCTTGGATGGAGTAGTAGACGATTAGCCTTCGGAGATTTTACCCCCAACTAATGAGAAGTGGCATCCAATCAGTAGAACTGAGACAGGTATTGAGCCTTACCTGTCATAACGTCTCATGATCATGATACTAAATGAGTAAACTAAACGAGTAATTACTGAAATCATTTTTTCAGGATAGTAGCATGCATGAAAACTCATGATTGACTTTTCAATGTACATAACAATTCTACATGGGAACATCACATTCATCATATTAGCATAAATGTTTAATTTCCCTTTTTCAAGTTTA
Coding sequence (CDS)
ATGGCAACTTACTCTCGACCACCCATGGCGTGTAATTCTTCAGCCTGCCAGTCCAACTGCTATAGAAATCAAGATGACGAGGCAACAGTCGAACAAGATTCACTTCGAACAAACAAGGCCGATCGATTAGCCGCCACGAACGGAGACAGTGGTGATACGCATCTCTGCTTTAAATGCAAGGCCAAGGAGCGCATGTCTAGCTCTGAAGAAGGAGACGATGGGCGCTTTTGCAGCGATTGCTTTCGGAGCAACTTGTTTGCAAAGTTCCGGCAGGCTGTAAACTCGAACGCCATGATCTCTCCTTCTGATAAAGTGCTTGTTGCCTTCTCCGGGGGTCCTTGTTCCAGGGTGGCTTTGCAATTTGTTCATGAGATGCAAGTTAAAGCACACAAAAATTTTGAAGCAAGTAGGGATAGATCACTGCAAGTTTTTGGTGTTGGAGTTGCTTATATTGATGAAACCTCTGCTTGTCCTATCCCTTTGCATGAGATAGACAGAACAATTCAAACCATCCAATCAGTTGTGTCAAGTCTATCTCCACCGATAAAAGATTTGCATATTGTTCAAATTGAGAGTGTATACTCTTCAAATTTGAGTGACGGAAGGGAGAAGTTGAAGAAGTTGTTAGATACAGTCAGTGATGTCACAGGAAAGGAAGACCTTATCTCACATTTGCGGATGTTATCCTTGCAAAAAATTGCCGCTGAAAATGGATACAACAGACTTGTACTTGGGACATGTACTTCAAGGATTGCTTGCCATGTGATTTCTTCCACTGTTAAGGGCCAAGGATATTCCTTACCGGCAGATATACAGTATGTTGATGCAAGGTGGGAGGTCCCAGTGGCACTTCCTCTACGTGATTGTCTTGCACAAGAGCTCAACATGCTTTGCTGTGCTGATGGTCTAAAGACAGAGGAACTGACCAAAACATCCTTTTCTGGCATCAATGACTTGGTCTCATCATTTGTGGCTCTATTGCAGGAAGAGAATCCCTCTCGTGAGTCTACAATTGTGAGAACTGCTGGCAAGCTTACTCCATTCAACTTTAGCAGAATTCCAGATTTGAATGAAAGTAATGGTGTTCCTTTGGCCACCAAAAGGCGTCAAAAGAGAAATAACTTTAAGCATGTTAACTCTTTATCATCGGAAACATTTTGTGCAGTCTGCAATGGTCCACTTAACATGTCCGATGTGCAAACTTTAAGAAGTTTTGAAGCTGGCCAGGTAAGTTCAATTTTGGCTGGTACCTGTTGTTCAAGTTGTCAATTTCAGATTCTTCCCAAGGATTCCATATCGCAAGAACTTCTTCTTTCACTCTTGCCACCCTCTATGGTTGCTCGAGCAATGCATGGCAGCCCTAGCAATTCCAATTCGCTAAGGGAGCAAATACAGGAATTCTTGCTGTCAGATGATGAAGTCGAATCGTAA
Protein sequence
MATYSRPPMACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSSEEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVKAHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIVQIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCTSRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEELTKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKRRQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQILPKDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDEVES
Homology
BLAST of CmoCh06G000450 vs. ExPASy Swiss-Prot
Match:
O65628 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Arabidopsis thaliana OX=3702 GN=CTU2 PE=2 SV=3)
HSP 1 Score: 530.0 bits (1364), Expect = 2.7e-149
Identity = 274/466 (58.80%), Postives = 341/466 (73.18%), Query Frame = 0
Query: 9 MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSS 68
MACNSS C+S CY + D + D A +G +C KCK M+
Sbjct: 1 MACNSSGCESGCYDREKDNGSKIVDD----------AVSGGGNHESVCVKCKCNAPMTFG 60
Query: 69 EEG-DDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQV 128
+ G DDGRFC+DCFR+N+F KFR AV S+AMI+PSD VLVAFSGG SRV+LQFVHE+Q+
Sbjct: 61 DGGFDDGRFCADCFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVSLQFVHELQI 120
Query: 129 KAHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHI 188
KA KN+EASRDRSL VFGVGVA++DET+A P E+ I+ ++ VS LSPP KDLH+
Sbjct: 121 KALKNYEASRDRSLPVFGVGVAFVDETAAFPALSTEMIDAIEWVRYTVSCLSPPAKDLHV 180
Query: 189 VQIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTC 248
V +ES++ S+ D R++L KLLD+V D TGKEDL+ HL+MLSLQK+AAENGYNRLVLG+C
Sbjct: 181 VPVESIFGSDSLDARDRLLKLLDSVPDDTGKEDLLLHLKMLSLQKVAAENGYNRLVLGSC 240
Query: 249 TSRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEE 308
TSRIA HV+++TVKG+GYSL ADIQ+VDARW+VP+ LPLRDC+ E+ LC DGLKT E
Sbjct: 241 TSRIASHVLTATVKGRGYSLSADIQHVDARWKVPIVLPLRDCVRLEITRLCLLDGLKTVE 300
Query: 309 LTKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATK 368
L S GINDLVSSFVALLQEENPSRE TIVRTA KLTPF F++IP+ ++SN VP+AT+
Sbjct: 301 LACRSQCGINDLVSSFVALLQEENPSRECTIVRTAAKLTPFYFNKIPETDDSN-VPMATQ 360
Query: 369 RRQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQIL 428
RR KR N K+ S+++E FC +CNGPLN SD L +FE GQ S +L CCSSC+FQIL
Sbjct: 361 RRLKRFNLKYDGSMTTEAFCPICNGPLNRSDSSELDTFEEGQESDVLYAACCSSCRFQIL 420
Query: 429 PKDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDE 474
P+D S E S LP M+++ H + LRE+I++ LL DDE
Sbjct: 421 PQDGSSLEQFSSFLPDHMISQVKHQKVDSQAYLREKIKDCLLLDDE 455
BLAST of CmoCh06G000450 vs. ExPASy Swiss-Prot
Match:
Q2QMW0 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CTU2 PE=2 SV=1)
HSP 1 Score: 387.5 bits (994), Expect = 2.2e-106
Identity = 212/466 (45.49%), Postives = 292/466 (62.66%), Query Frame = 0
Query: 10 ACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSSE 69
+C + C +C + A + + K RL+ + C KC +
Sbjct: 8 SCGGAGCGPHCSSSASAAAVEDAAAAAAEKVGRLSLSRE-------CGKCGGGAAAVAVA 67
Query: 70 EGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVKA 129
G C +CFR+NL KF+ AV SNAM+ P+D VL+AFSGGP SRVALQF+HEM+ KA
Sbjct: 68 GGLG--LCGECFRANLLGKFKLAVTSNAMVRPTDSVLLAFSGGPASRVALQFIHEMRCKA 127
Query: 130 HKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIVQ 189
++++ S ++L VFGVGVA++DE+ C P EI+ I+ I+S+VSSLS +K +HI +
Sbjct: 128 IESWDVSNSQALPVFGVGVAFVDESVLCSKPRDEIEMAIEDIRSIVSSLSTGVKAMHIAR 187
Query: 190 IESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCTS 249
+E V+S+ DG +L++ +D + D TG+ED + LRMLSLQKIA ENGY +++LG+C S
Sbjct: 188 LEDVFSTESEDGERRLREAVDMIGDDTGREDFLRCLRMLSLQKIAMENGYAKIMLGSCAS 247
Query: 250 RIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEELT 309
IACHV+S+TVKGQGYSLPAD+QYVD RWE+PV LPLRDCLAQEL +LC D LKT++
Sbjct: 248 AIACHVLSATVKGQGYSLPADVQYVDTRWEIPVVLPLRDCLAQELTLLCELDSLKTQQHL 307
Query: 310 KTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKRR 369
+GIN LV+SF+ L+EENPSRE TIVRTA KL PF+F++ + +P ++ R
Sbjct: 308 DRPSNGINSLVASFIKRLREENPSREHTIVRTAQKLKPFSFNKFSADGYHDFLP--SRLR 367
Query: 370 QKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRS--FEAGQVSSILAGTCCSSCQFQIL 429
K F S SE C +C P + S++Q L S +A + + CC SC FQIL
Sbjct: 368 PKFQKFDSDESTFSEILCLMCGSPFSESELQNLESTKHKAQKKIDLYTAHCCQSCYFQIL 427
Query: 430 PKDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDE 474
P E SLLP + S S+S LR+QI+E+LL +++
Sbjct: 428 PAGENLNEHFFSLLPKLWTGKMDTISDSHS-LLRDQIEEYLLEEND 461
BLAST of CmoCh06G000450 vs. ExPASy Swiss-Prot
Match:
A2ZM73 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=CTU2 PE=3 SV=1)
HSP 1 Score: 386.3 bits (991), Expect = 4.9e-106
Identity = 212/466 (45.49%), Postives = 292/466 (62.66%), Query Frame = 0
Query: 10 ACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSSE 69
+C + C +C + A + + K RL+ + C KC +
Sbjct: 8 SCGGAGCGPHCSSSASAAAVEDAAAAAAEKVGRLSLSRE-------CGKCGGGAAAVAVA 67
Query: 70 EGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVKA 129
G C +CFR+NL KF+ AV SNAM+ P+D VL+AFSGGP SRVALQF+HEM+ KA
Sbjct: 68 GGLG--LCGECFRANLLGKFKLAVTSNAMVRPTDSVLLAFSGGPASRVALQFIHEMRCKA 127
Query: 130 HKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIVQ 189
++++ S ++L VFGVGVA++DE+ C P EI+ I+ I+S+VSSLS +K +HIV+
Sbjct: 128 IESWDVSNSQALPVFGVGVAFVDESVLCSKPRDEIEMAIEDIRSIVSSLSTGVKAMHIVR 187
Query: 190 IESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCTS 249
+E V+S+ DG +L++ +D + D TG+ED + LRMLSLQKIA ENGY +++LG+C S
Sbjct: 188 LEDVFSTESEDGERRLREAVDMIGDDTGREDFLRCLRMLSLQKIAMENGYAKIMLGSCAS 247
Query: 250 RIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEELT 309
IACHV+S+TVKGQGYSLPAD+QYVD RWE+PV LPLRDCLAQEL +LC D LKT++
Sbjct: 248 AIACHVLSATVKGQGYSLPADVQYVDTRWEIPVVLPLRDCLAQELTLLCELDSLKTQQHL 307
Query: 310 KTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKRR 369
+GIN LV+SF+ L+EENPSRE TIVRTA KL PF+F++ + +P ++ R
Sbjct: 308 DRPSNGINSLVASFIKRLREENPSREHTIVRTAQKLKPFSFNKFSADGYHDFLP--SRLR 367
Query: 370 QKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRS--FEAGQVSSILAGTCCSSCQFQIL 429
K S SE C +C P + S++Q L S +A + + CC SC FQIL
Sbjct: 368 PKFQKVDSDESTFSEILCLMCGSPFSESELQNLESTKHKAQKKIDLYTAHCCQSCYFQIL 427
Query: 430 PKDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDE 474
P E SLLP + S S+S LR+QI+E+LL +++
Sbjct: 428 PAGENLNEHFFSLLPKLWTGKMDTISDSHS-LLRDQIEEYLLEEND 461
BLAST of CmoCh06G000450 vs. ExPASy Swiss-Prot
Match:
Q08B12 (Cytoplasmic tRNA 2-thiolation protein 2-A OS=Xenopus laevis OX=8355 GN=ctu2-a PE=2 SV=1)
HSP 1 Score: 109.0 bits (271), Expect = 1.5e-22
Identity = 134/516 (25.97%), Postives = 209/516 (40.50%), Query Frame = 0
Query: 55 LCFKCKAKERMSSSEEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPC 114
+C KCK GD FC CF+ KFR + N +I P +KVL+A+SGGP
Sbjct: 24 ICMKCKESSAALLIRAGD--AFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAYSGGPS 83
Query: 115 SRVALQFVHEMQVKAHKNFEASRDRSLQV-FGVGVAYIDETSACPIPLHEIDRTIQTIQS 174
S ++ V E SRD ++ F G+ +IDE +AC + E + + I S
Sbjct: 84 SSAMVRQVQE---------GLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQILSEICS 143
Query: 175 VVSSLSPPIKDLHIVQIESVYS---SNLSDG----------------------------- 234
V+ P HIV +E V+S S L G
Sbjct: 144 VLQQTKIP---FHIVSLEQVFSLPGSVLQRGAPEQRPNYKEEVDRFLVQEREQGDAGCSE 203
Query: 235 -------------------------------REKLKKLLDTVSDVTGKEDLISHLRMLSL 294
+KLK+L + +T K+ L+ LR +
Sbjct: 204 MLERLEVTDSDSPGSSDKMYQSTCSHPPDMHTQKLKQLFASAKTLTAKQQLLHTLRSHLI 263
Query: 295 QKIAAENGYNRLVLGTCTSRIACHVISSTVKGQGYSLPADIQYVDARW-EVPVALPLRDC 354
IA GY++++ G +R++ ++S+ G+G LP D + D+R+ +V + P+R+
Sbjct: 264 LHIARTCGYSKVMTGESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREY 323
Query: 355 LAQEL---NMLCCADGLKTEEL-TKTS-FSGINDLVSSFVALLQEENPSRESTIVRTAGK 414
++E+ N + L TK S S I L FV LQ + PS ST+ RT+ K
Sbjct: 324 SSKEIAYYNRFFNVSPIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEK 383
Query: 415 LTPFNFSRI----------------PDLNESNGVPLATKRRQKRNNFKH-----VNSLSS 474
L N S+I L+ G A Q ++ N L++
Sbjct: 384 L---NVSKIDADQETCAKDRCLLCLSPLDTQAGKASAFSATQLSHHLSQKIPMKSNDLAN 443
Query: 475 ETFCAVCNGPLNMSDV---QTLRSFEAGQVSSILAGTCCSSCQFQILPKDSISQELLLSL 477
+ + C G + T +S A Q S + C SC+ + KD S L +
Sbjct: 444 NSDKSCCQGGQGCKEAGYGDTCQS-RALQTPSFV-HMLCYSCRLTV--KDMQS----LDV 503
BLAST of CmoCh06G000450 vs. ExPASy Swiss-Prot
Match:
Q28ES8 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Xenopus tropicalis OX=8364 GN=ctu2 PE=2 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 3.7e-21
Identity = 135/530 (25.47%), Postives = 202/530 (38.11%), Query Frame = 0
Query: 56 CFKCKAKERMSSSEEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCS 115
C KCK + GD FC CF+ KFR + N +I P +KVL+AFSGGP S
Sbjct: 25 CMKCKESSAVLLIRAGD--AFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAFSGGPSS 84
Query: 116 RVALQFVHEMQVKAHKNFEASRDRSLQV-FGVGVAYIDETSACPIPLHEIDRTIQTIQSV 175
+Q V E SRD ++ F G+ +IDE + C + E + + +Q+V
Sbjct: 85 SAMVQQVQE---------GMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNMSEVQNV 144
Query: 176 VSSLSPPIKDLHIVQIESVYS---------------------------------SNLSDG 235
+ P +IV +E V+S + SD
Sbjct: 145 LQQTGFP---FYIVSLEQVFSLPGSILQRGVPEQRANYKQEVDRFMVQQQAQGETGCSDI 204
Query: 236 REKLKKLLDTVSD---------------------------------VTGKEDLISHLRML 295
E L KL VS+ +T K L+ LR
Sbjct: 205 LENLAKLGVNVSESSRESDKMFQSTCRHPPDTHTQKLIQLFASAKTLTAKHQLLHTLRSH 264
Query: 296 SLQKIAAENGYNRLVLGTCTSRIACHVISSTVKGQGYSLPADIQYVDARW-EVPVALPLR 355
+ IA GY++++ G +R++ ++S+ G+G LP D + D+R+ +V + P+R
Sbjct: 265 LILHIARTCGYSKVMSGESCTRLSVSLLSNISLGRGAFLPLDTGFCDSRYGDVDIIRPMR 324
Query: 356 DCLAQEL---NMLCCADGLKTEEL-TKT-SFSGINDLVSSFVALLQEENPSRESTIVRTA 415
+ +E+ N L + L TK S I L F+ LQ + PS ST+ RT+
Sbjct: 325 EYSLKEIAFYNRLFHVSSVFIPALNTKVLENSSIQQLSEVFINRLQADFPSTVSTVYRTS 384
Query: 416 GKLTPFNFSRIPDLNESNGVPLATKRRQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTL 474
KL N S+I D N+ K R C +C PL+ + V
Sbjct: 385 EKL---NVSKI-DANQGT----CAKER-----------------CLLCLSPLD-TQVGEA 444
BLAST of CmoCh06G000450 vs. ExPASy TrEMBL
Match:
A0A6J1FHP7 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445447 PE=3 SV=1)
HSP 1 Score: 922.2 bits (2382), Expect = 9.1e-265
Identity = 468/468 (100.00%), Postives = 468/468 (100.00%), Query Frame = 0
Query: 9 MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSS 68
MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSS
Sbjct: 1 MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSS 60
Query: 69 EEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVK 128
EEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVK
Sbjct: 61 EEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVK 120
Query: 129 AHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIV 188
AHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIV
Sbjct: 121 AHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIV 180
Query: 189 QIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCT 248
QIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCT
Sbjct: 181 QIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCT 240
Query: 249 SRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEEL 308
SRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEEL
Sbjct: 241 SRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEEL 300
Query: 309 TKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKR 368
TKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKR
Sbjct: 301 TKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKR 360
Query: 369 RQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQILP 428
RQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQILP
Sbjct: 361 RQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQILP 420
Query: 429 KDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDEVES 477
KDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDEVES
Sbjct: 421 KDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDEVES 468
BLAST of CmoCh06G000450 vs. ExPASy TrEMBL
Match:
A0A6J1I684 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111470013 PE=3 SV=1)
HSP 1 Score: 911.4 bits (2354), Expect = 1.6e-261
Identity = 463/468 (98.93%), Postives = 464/468 (99.15%), Query Frame = 0
Query: 9 MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSS 68
MACNSSACQSNCYRNQDDEATVEQDSLRTNK DRLAAT GDSGDTHLCFKCKAKERMSSS
Sbjct: 1 MACNSSACQSNCYRNQDDEATVEQDSLRTNKTDRLAATYGDSGDTHLCFKCKAKERMSSS 60
Query: 69 EEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVK 128
EEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVK
Sbjct: 61 EEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQVK 120
Query: 129 AHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIV 188
AHKNFEASRDRSL VFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIV
Sbjct: 121 AHKNFEASRDRSLHVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHIV 180
Query: 189 QIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCT 248
QIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCT
Sbjct: 181 QIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTCT 240
Query: 249 SRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEEL 308
SRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKT EL
Sbjct: 241 SRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTVEL 300
Query: 309 TKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKR 368
TKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKR
Sbjct: 301 TKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATKR 360
Query: 369 RQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQILP 428
RQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQILP
Sbjct: 361 RQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQILP 420
Query: 429 KDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDEVES 477
KDSISQELLLSLLPPSMVARAMHGSPSNSNSLRE+IQEFLLSDDEVES
Sbjct: 421 KDSISQELLLSLLPPSMVARAMHGSPSNSNSLREKIQEFLLSDDEVES 468
BLAST of CmoCh06G000450 vs. ExPASy TrEMBL
Match:
A0A6J1DEW9 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Momordica charantia OX=3673 GN=LOC111019863 PE=3 SV=1)
HSP 1 Score: 775.8 bits (2002), Expect = 1.1e-220
Identity = 401/476 (84.24%), Postives = 425/476 (89.29%), Query Frame = 0
Query: 9 MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAA-------TNGDSGDTHLCFKCKA 68
MACNSS CQSNCYRNQDDE T+EQ S NKA+ AA TNGD G+THLCFKCK+
Sbjct: 1 MACNSSTCQSNCYRNQDDEETLEQHSPPANKAEAAAAMESCPVDTNGD-GNTHLCFKCKS 60
Query: 69 KERMSSSEEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQF 128
ERMSSS GDDGRFCS CFRSNLFAKFR AV SNAMISPSDKVLVAFSGGPCSRVALQF
Sbjct: 61 NERMSSSGVGDDGRFCSGCFRSNLFAKFRLAVTSNAMISPSDKVLVAFSGGPCSRVALQF 120
Query: 129 VHEMQVKAHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPP 188
VHE+QVKAHKNFEASRDRSLQVFGVGVAYIDETSAC IP HE+D I+TIQSVVS+L PP
Sbjct: 121 VHELQVKAHKNFEASRDRSLQVFGVGVAYIDETSACSIPSHEMDSAIETIQSVVSNLRPP 180
Query: 189 IKDLHIVQIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNR 248
K+LHIVQIESVYSSNL D REKLKKLLDTV+DVTGKEDL+SHLRMLSLQKIA ENGYNR
Sbjct: 181 SKELHIVQIESVYSSNLGDRREKLKKLLDTVNDVTGKEDLLSHLRMLSLQKIATENGYNR 240
Query: 249 LVLGTCTSRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCAD 308
L++GTCTSRIA HVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDC+AQEL+MLCC D
Sbjct: 241 LLVGTCTSRIARHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCIAQELHMLCCVD 300
Query: 309 GLKTEELTKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNG 368
GLKT EL K SFSGIN LVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDL+ESN
Sbjct: 301 GLKTVELAKNSFSGINGLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLDESNN 360
Query: 369 VPLATKRRQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAG-QVSSILAGTCCS 428
VPLATKRRQKRNN KHVNS+SSE+FCAVCN PLN+SDVQTLRS E + ++IL+GT CS
Sbjct: 361 VPLATKRRQKRNNVKHVNSISSESFCAVCNSPLNISDVQTLRSCETSPETANILSGTWCS 420
Query: 429 SCQFQILPKDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDEVES 477
SCQFQILPKDS SQEL LSLLPPSMVARA+HGS NSNSLREQIQEFLLSDDE ES
Sbjct: 421 SCQFQILPKDSTSQELFLSLLPPSMVARAIHGSTGNSNSLREQIQEFLLSDDEAES 475
BLAST of CmoCh06G000450 vs. ExPASy TrEMBL
Match:
A0A1S3B7H9 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Cucumis melo OX=3656 GN=LOC103486848 PE=3 SV=1)
HSP 1 Score: 758.1 bits (1956), Expect = 2.3e-215
Identity = 392/473 (82.88%), Postives = 417/473 (88.16%), Query Frame = 0
Query: 9 MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAA-----TNGDSGDTHLCFKCKAKE 68
MACNSSACQSNCYRNQ DE T+EQDS +++ A TN D+ +T+LCFKCK+KE
Sbjct: 1 MACNSSACQSNCYRNQHDEHTIEQDSPPSSRPGTAAVGESRITNDDNSNTNLCFKCKSKE 60
Query: 69 RMSSSEEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVH 128
RMS+S GDDGR CSDCFRSNLFAKFRQAV SNAMISPSDKVLVAFSGGPCSRVALQFVH
Sbjct: 61 RMSTSGVGDDGRLCSDCFRSNLFAKFRQAVTSNAMISPSDKVLVAFSGGPCSRVALQFVH 120
Query: 129 EMQVKAHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIK 188
E+QVKAHKNFEASRDRSLQVFGVGVAYI+ET+A IP EID+TIQTIQSVVSSLS P K
Sbjct: 121 EIQVKAHKNFEASRDRSLQVFGVGVAYINETAAYSIPSDEIDKTIQTIQSVVSSLSQPRK 180
Query: 189 DLHIVQIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLV 248
DLHIV IE+VYSSNLSDGREKLKKLLD V DVTGKEDLIS+LRMLSLQKIAAENGYNRL+
Sbjct: 181 DLHIVPIENVYSSNLSDGREKLKKLLDAVDDVTGKEDLISYLRMLSLQKIAAENGYNRLL 240
Query: 249 LGTCTSRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGL 308
+GTCTSRIACHVISSTVKGQGYSLPAD+QY+DARWEVPV LPL DCLAQELNMLCC DGL
Sbjct: 241 VGTCTSRIACHVISSTVKGQGYSLPADVQYIDARWEVPVVLPLLDCLAQELNMLCCIDGL 300
Query: 309 KTEELTKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVP 368
KT ELTK S SGINDLVSSFVALLQ ENPSRESTIVRTAGKLTPFNFSRIPDLNESN VP
Sbjct: 301 KTVELTKKSSSGINDLVSSFVALLQVENPSRESTIVRTAGKLTPFNFSRIPDLNESNNVP 360
Query: 369 LATKRRQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQ 428
LATKRRQKRNNFKHVNSLSSE+FCAVCNGPLN SDVQT + SS + G CCSSCQ
Sbjct: 361 LATKRRQKRNNFKHVNSLSSESFCAVCNGPLNTSDVQTRHA------SSSILGACCSSCQ 420
Query: 429 FQILPKDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDEVES 477
FQILPKDS+S EL LSLLPPSMVARA HGS NSNSLR +IQEFLLSDD+ ES
Sbjct: 421 FQILPKDSLSHELFLSLLPPSMVARATHGSLGNSNSLRNKIQEFLLSDDDAES 467
BLAST of CmoCh06G000450 vs. ExPASy TrEMBL
Match:
A0A5D3DPK4 (Cytoplasmic tRNA 2-thiolation protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006240 PE=3 SV=1)
HSP 1 Score: 758.1 bits (1956), Expect = 2.3e-215
Identity = 392/473 (82.88%), Postives = 417/473 (88.16%), Query Frame = 0
Query: 9 MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAA-----TNGDSGDTHLCFKCKAKE 68
MACNSSACQSNCYRNQ DE T+EQDS +++ A TN D+ +T+LCFKCK+KE
Sbjct: 1 MACNSSACQSNCYRNQHDEHTIEQDSPPSSRPGTAAVGESRITNDDNSNTNLCFKCKSKE 60
Query: 69 RMSSSEEGDDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVH 128
RMS+S GDDGR CSDCFRSNLFAKFRQAV SNAMISPSDKVLVAFSGGPCSRVALQFVH
Sbjct: 61 RMSTSGVGDDGRLCSDCFRSNLFAKFRQAVTSNAMISPSDKVLVAFSGGPCSRVALQFVH 120
Query: 129 EMQVKAHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIK 188
E+QVKAHKNFEASRDRSLQVFGVGVAYI+ET+A IP EID+TIQTIQSVVSSLS P K
Sbjct: 121 EIQVKAHKNFEASRDRSLQVFGVGVAYINETAAYSIPSDEIDKTIQTIQSVVSSLSQPRK 180
Query: 189 DLHIVQIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLV 248
DLHIV IE+VYSSNLSDGREKLKKLLD V DVTGKEDLIS+LRMLSLQKIAAENGYNRL+
Sbjct: 181 DLHIVPIENVYSSNLSDGREKLKKLLDAVDDVTGKEDLISYLRMLSLQKIAAENGYNRLL 240
Query: 249 LGTCTSRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGL 308
+GTCTSRIACHVISSTVKGQGYSLPAD+QY+DARWEVPV LPL DCLAQELNMLCC DGL
Sbjct: 241 VGTCTSRIACHVISSTVKGQGYSLPADVQYIDARWEVPVVLPLLDCLAQELNMLCCIDGL 300
Query: 309 KTEELTKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVP 368
KT ELTK S SGINDLVSSFVALLQ ENPSRESTIVRTAGKLTPFNFSRIPDLNESN VP
Sbjct: 301 KTVELTKKSSSGINDLVSSFVALLQVENPSRESTIVRTAGKLTPFNFSRIPDLNESNNVP 360
Query: 369 LATKRRQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQ 428
LATKRRQKRNNFKHVNSLSSE+FCAVCNGPLN SDVQT + SS + G CCSSCQ
Sbjct: 361 LATKRRQKRNNFKHVNSLSSESFCAVCNGPLNTSDVQTRHA------SSSILGACCSSCQ 420
Query: 429 FQILPKDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDEVES 477
FQILPKDS+S EL LSLLPPSMVARA HGS NSNSLR +IQEFLLSDD+ ES
Sbjct: 421 FQILPKDSLSHELFLSLLPPSMVARATHGSLGNSNSLRNKIQEFLLSDDDAES 467
BLAST of CmoCh06G000450 vs. TAIR 10
Match:
AT4G35910.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )
HSP 1 Score: 530.0 bits (1364), Expect = 1.9e-150
Identity = 274/466 (58.80%), Postives = 341/466 (73.18%), Query Frame = 0
Query: 9 MACNSSACQSNCYRNQDDEATVEQDSLRTNKADRLAATNGDSGDTHLCFKCKAKERMSSS 68
MACNSS C+S CY + D + D A +G +C KCK M+
Sbjct: 1 MACNSSGCESGCYDREKDNGSKIVDD----------AVSGGGNHESVCVKCKCNAPMTFG 60
Query: 69 EEG-DDGRFCSDCFRSNLFAKFRQAVNSNAMISPSDKVLVAFSGGPCSRVALQFVHEMQV 128
+ G DDGRFC+DCFR+N+F KFR AV S+AMI+PSD VLVAFSGG SRV+LQFVHE+Q+
Sbjct: 61 DGGFDDGRFCADCFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVSLQFVHELQI 120
Query: 129 KAHKNFEASRDRSLQVFGVGVAYIDETSACPIPLHEIDRTIQTIQSVVSSLSPPIKDLHI 188
KA KN+EASRDRSL VFGVGVA++DET+A P E+ I+ ++ VS LSPP KDLH+
Sbjct: 121 KALKNYEASRDRSLPVFGVGVAFVDETAAFPALSTEMIDAIEWVRYTVSCLSPPAKDLHV 180
Query: 189 VQIESVYSSNLSDGREKLKKLLDTVSDVTGKEDLISHLRMLSLQKIAAENGYNRLVLGTC 248
V +ES++ S+ D R++L KLLD+V D TGKEDL+ HL+MLSLQK+AAENGYNRLVLG+C
Sbjct: 181 VPVESIFGSDSLDARDRLLKLLDSVPDDTGKEDLLLHLKMLSLQKVAAENGYNRLVLGSC 240
Query: 249 TSRIACHVISSTVKGQGYSLPADIQYVDARWEVPVALPLRDCLAQELNMLCCADGLKTEE 308
TSRIA HV+++TVKG+GYSL ADIQ+VDARW+VP+ LPLRDC+ E+ LC DGLKT E
Sbjct: 241 TSRIASHVLTATVKGRGYSLSADIQHVDARWKVPIVLPLRDCVRLEITRLCLLDGLKTVE 300
Query: 309 LTKTSFSGINDLVSSFVALLQEENPSRESTIVRTAGKLTPFNFSRIPDLNESNGVPLATK 368
L S GINDLVSSFVALLQEENPSRE TIVRTA KLTPF F++IP+ ++SN VP+AT+
Sbjct: 301 LACRSQCGINDLVSSFVALLQEENPSRECTIVRTAAKLTPFYFNKIPETDDSN-VPMATQ 360
Query: 369 RRQKRNNFKHVNSLSSETFCAVCNGPLNMSDVQTLRSFEAGQVSSILAGTCCSSCQFQIL 428
RR KR N K+ S+++E FC +CNGPLN SD L +FE GQ S +L CCSSC+FQIL
Sbjct: 361 RRLKRFNLKYDGSMTTEAFCPICNGPLNRSDSSELDTFEEGQESDVLYAACCSSCRFQIL 420
Query: 429 PKDSISQELLLSLLPPSMVARAMHGSPSNSNSLREQIQEFLLSDDE 474
P+D S E S LP M+++ H + LRE+I++ LL DDE
Sbjct: 421 PQDGSSLEQFSSFLPDHMISQVKHQKVDSQAYLREKIKDCLLLDDE 455
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O65628 | 2.7e-149 | 58.80 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Arabidopsis thaliana OX=3702 GN=CTU2 ... | [more] |
Q2QMW0 | 2.2e-106 | 45.49 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Oryza sativa subsp. japonica OX=39947... | [more] |
A2ZM73 | 4.9e-106 | 45.49 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Oryza sativa subsp. indica OX=39946 G... | [more] |
Q08B12 | 1.5e-22 | 25.97 | Cytoplasmic tRNA 2-thiolation protein 2-A OS=Xenopus laevis OX=8355 GN=ctu2-a PE... | [more] |
Q28ES8 | 3.7e-21 | 25.47 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Xenopus tropicalis OX=8364 GN=ctu2 PE... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FHP7 | 9.1e-265 | 100.00 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A6J1I684 | 1.6e-261 | 98.93 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111470... | [more] |
A0A6J1DEW9 | 1.1e-220 | 84.24 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Momordica charantia OX=3673 GN=LOC111... | [more] |
A0A1S3B7H9 | 2.3e-215 | 82.88 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Cucumis melo OX=3656 GN=LOC103486848 ... | [more] |
A0A5D3DPK4 | 2.3e-215 | 82.88 | Cytoplasmic tRNA 2-thiolation protein 2 OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
Match Name | E-value | Identity | Description | |
AT4G35910.1 | 1.9e-150 | 58.80 | Adenine nucleotide alpha hydrolases-like superfamily protein | [more] |