CmoCh06G000440 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	elongation factor family protein
Location	Cmo_Chr06: 280967 .. 292257 (-)
RNA-Seq Expression	CmoCh06G000440
Synteny	CmoCh06G000440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATACCAAACAAATGGATTAAACAAAATCCTCAACACTTTGTAAGGCGGGACGAGGCCTCATTTTACAGCCTCAATTGCCAAATCCTTCACTCTCCCTTCAGCAAGAGAGAGAAGAGAGCCGGCCAGAGCAGCCATGGAAATGGTAATGACCTTCAGCAGCTCCTTATCCTCTTCCCCACTGGTTTACCCCAAAATCAAACTCGGAACAGTCTTCACTCCTCAAATTAAGCAGCTCCATGGCCTCACTTCGTCCTCCAGGATTTCAACTTCATTGCCTAAACAAGCTCTCAGCTCTCGTTCGAGAGTTCCAATTCGATGTCCGGTCAAATGCTCTGTCTCTGAAGCTACTGAAGCCCGCACCGGTATCCCCTCTCTCTCTCTACGTCCGTTTTATTTGGTCATTTATCGGTGTGTTGATGAGAAGAGAGAAAGCTACTGTCCATTTCTCGACCTCTGTATTTGCTATGCTGCGACGAGGAATTAGGAACCAGTATCGATAATTCTTATAGTTTATGAAAGTTTTTGTACTTGTGTAATCTCTCTTTGTTTTTGGTGATTTTTATGGTTTTTATGTGTTGGGAGATTCTTTGGTTGCATCAACGTTAAATCTAATATTGGTCTTCCACCCCACCCAAAATTTATTACTAACTTTTTTCTTTGGAATTTTCATTTCTGGGCTGATGTTTTGCATTAGAGAAGAGCCAACTGATGAGGAGACAAGATATAAGGAACATAGCCATAGTGGCTCATGTAGACCATGGAAAGACAACTTTGGTTGATGCTATGTTGAAACAAGCAAAGGTAATACCCAGATAATCATTTCTAATGTTTGTTTTGCACTGCAGGTGTTAATTCTTCATTCTGTTATATTACGATTGCATGATTTCCAAATCATCAATACTGTTTAGTGCAGCGTAATGCAATGATTTTGAGCAAAGACTAACTATGTTGTACCTGCTGGGTTATGCCCTATTTATTTTTTATGTCAATCATTTGATGTACTAGAGCTTAGAGCTAGAGCTAGAAATGATCATGAAAAACATTCGAAGTACTTAATAGTTTTTTTTTTTTTCCCATACATCCAAGGGTGTAAAACTCCTCGAACAATTTCTCCTTTTGGAGTTCATGTAATTTATTTTCTAAAAGCAATCTAAGACTGTGTACTTAGCAAGAAACGTTAACAATAATAACCTTCAACCTAATGCATTTCATATTTTCAATTGCAGGTATTTCGTGACAACCAAGTTGTGAAAGAAAGAATAATGGATTCAAATGACTTAGAGCGTGAAAGAGGAATTACAATACTGAGCAAAAATACATCTATTACATATAAGGATACAAAGATCAATATTATTGACACTCCTGGGCACTCTGATTTTGGCGGTGAAGTTGAACGCATTCTCAATATGGTGGAAGGGATTCTTCTTGTGGTATTCTTCAACATATTCTACCTATTTGAAACTGTGGTTCTATCTTCAAATTTATATTTTAGATATTTAAAATTTGATTTTGGTTTAAATACTATTTTGGTCCCTATAATTCTTGCTTTGGTTCGGTTTGGTACTTGTACTTTCAAAATGTCCATTTTGCTTCCCATACTTTCAAAATGTCTCTTAAAAAGTAACTTATTTAGTCCCTTTTCATTTCCATTTTTTCCTAATTTTTCAATCATAATTTTAGCATGATATTTCACTTACTGAACTTCAAATGTAATTATAAATTTGTATTAAAGAGTTTCTATTGTGTGAAAATTTATGCTTAAATTTGACGAACAGGGACTAAATTGATAACTTTTTAAAAGTATAGGGACTAAAATTAATTAAATTTTTAAATCGATGTCTCAATTCTTGGTGCACTGTGGATCACTTGTCACTTTCCAATAACCTACTGACAAAAGAAGCAACCTCAGAGGCTTATCTCATGCTTGTCGTGTCTACCCTTTTTTTTTTATGGCGTCAAGTCAGTGGAAAGTTGAAGGTTTGATAGAGTGATTGCAAGTGAGTTAAAGATAAAATAGTAAGGTTGCAAGTACTTTGGTTCTAGATAAATGATTGTTGAATGTTTGACTAATTTATAATTTGTATTGCCAACTAATCAAAAGCAACAACTGTAAGTTTGATAACTTGTTGTAGCTTCATCATAAAAATATTATTAGATTAGGGGCTAAAGGGTTATATGGGCGTCTTTTCAAAATTAGGGGCTAAATTTTACTATTTCCCTCTCACACATTTTATGGAGAGGAATATTTGATGGAAATAGTTTATTATAATGTTTGTTACAAGGTTCTTGCTCTTTCAACTAAACACCTTATTCTCACCTAACCCTTGACTTCCCATGGATTTACCGTACATGTTTCTTTTTTTCTATTCTTAAGTTCAAAATCTCGTTTGAAATCTGATTGCATAGTTTTGAAACTGAGACATTTAGCTTTCCTTGGAATTTCTTTCTATCGAAGTTCAATAACCTACTAAAATTTCTAGATAGTTTCCATGACAATAAAAAAAAAAAAAAAAAAAAGAGTTAAGGATTTTAAGTTGCAGATGGGACTGTTTCAGAATAAAAATGCTAAACAAACTCAACTTATTTTTCAAATGGACAAGGCTGATATGCCAGAGCAAATTATCAAGTAATAAGGTCCAAAAGATTTTATCCTCTATATGACTTGGTTTAAACATTTTCATCTTGCCTATAATTTTACTAAAGGTATCTTCTAAAATATGTTTCTAACTTTGATCTTCTTGTGCTATCACCTCTTTTTCTATGTATTTATCTAGGTAGATTCTGTTGAAGGTCCAATGCCACAAACAAGATTTGTGCTTAAGAAGGCCCTAGAGTTTGGGCATGCTGTTGTTGTCGTGGTCAACAAGATTGATAGACCTTCAGCTCGTCCAGATTATGTGATCAATTCCACTTTTGAACTATTTATTGAACTGAACGCATCAGATGAACAGGTACATTTACAGTATTTGAAAATCATGGATAATGGCCTTATACCTATGCTTTATGATAAGAATCAACAAGATATTAAGTATGAGTAAAGGATATATAATAAGTGCATTGAACAATGTGGCAGAAAAGAGAATATTACAATTTGCAAGGTACCAGACAACAACCAATCTTTTGAAATTAACACCATTATTGTTTGTATGTATAGTCATACTTTATTGTAATTGCACATTCTCGAGTTTAGAGTTCTCTTGTGTACTTATATGTGTGTCTCTCTAACATGGAGTACATTGATATTTTGCCAAATACTATTTGTACGGTATTAGAACATTAGGTACTAATGGTTTGGGAACTTTTGGGTTTGGGGTTTAAACCCCCTTTGTTTTTCACCTTAGGTTTTGTAAGCTTTATTGTCTTCACTTAAACCCATTGCCACCATCGCTGTGGTCAACGTACGTCATTGCCACCGCAAGTAAGATAAAAAAATTTCATCCTTTTTTGTCACCATCCAACCCACTAGGAAGGCCACCTTCCATTTTGTTAAAGACACTTTAGATATTAGAGCAACATTAAAGGATATTTAACCTAACTTTAAGATAGCAGTAAAGGATGATGTATATATTGTTGGCAACGAGAAGTGTATTAGAGAAGGTCAAACCAAGGGCCACAAAAAAAATGCTAAGGGCCGGGTAGAGAGAACCCCCGCCTAAAAACTAACGAATGAGCACCTTCAAATTTACAACAATATTTTATGCTTTGTTACAAACCTTATAATATTAGAGCCGCGGAGGTTAATGAAAATTATTAATGGAAGTCATTCTAAGTGATTCACTCAGTAGAGGGAAATTGCACACAATCTGACAAATATATGAATGTTTTTTAATGTTTCATTTCATTATTTCTGATGGTGTAAGCAACGTCTTTTTCACTCCAACTTTTGTTTTGGTTCAGTGCGACTTCCAAGTGATTTACGCTAGTGGCATTCAAGGTAAGGCTGGATTATCTCCTGAAAAATTGGGAGAAGATCTTGGACCACTTTTTGAGTCTATAATCAGATGCATCCCTGGACCACGTATTGACAAAGATGGTGCATTGCAAATGCTTGTAAGTGATCTTTCTTTTCATTGTGAACACTTCGTTTACCTTCAATAATATAATTGATTTGAACTGTTGAAGATCCGCTAGAATATTATTACATATCGCATCTTTATGGATAATAAAAGAACTTTTACAAGTTAGTTTTCTAGAATGATAGTGTCCTAAATCCTAAACCAAAAAACACATGAATTCAATTTCTGACTTTTCTTATTATTTAACGTAAAAAAACTGTACTATCTTGTTTGGTTTTGAAATATTCTACTTTTATTAATCTAAGTTTCACACACATCATAAGTACGCTTTGTTCAAGCCACTAACACTATATCTTCTATTTGCCCCCAATTTATTAATTTTTTTTTATTCTTTGGTCCCAATTCTTAATCCTTCCACCATGTAGTTAAACTTTATGACGAGTCCATTAAATGAATTCTTGCATATTTTGTACTTTAATCTCATGTTTTAGTATGTGATTATGTACTCAAGTCTCATGTGACATTCTTAAAGATGCAACATGGATGACAAACATAGGCTTCTCAGTTCTCCAAATTTGACAAAACTTAGTTCAACTCTTTTGTCTTGAACTTTTTATTCTCTTAAAACATGTCTCAATTTTAATATGTACTTCTTATCCTAGGCTACAAATATTGAATACGACGAGCACAAAGGAAGGATAGCCATTGGTCGACTGCATGCTGGAGAACTGCAAAAAGGAATGGATGTGAAGGTTAGTCCATTTTGCAGGTTGAGCTAGACTTACCAGCATTTGCTTTTCTTTAAGGTTTCCTTTCCATTTCATGATAGAGGTTTCCGAAGCAACCTGTTTTTTGCTATTATTTGGAATAGATCGTTGAAAAGTTATAGAAGGATCTTTCAGGATGTGGAGGTCTCTTAGGAGGAGACAGGATATTTGTCTCATCTTTTAACTATTTGGGCCTCCACAGTTCTACCACCTTTTTCCCCCCAATATTTGTTAAAGTTCTAAATGATTGGCATAGCTCCTCTTCGTATAATATAGGACTCTTTGCCTTGAATAGAATTTTAGAATCTTCTAAGATTGATTCAAAGAAGTTGAACTTCTGCTTTTTCTTACTTTTTGGCTACTTTCTGGAGTTCTTTTATTGGAAAATTGTATTTTCTCTGTCTATTTTGATAACGAGAGGGGTGTAAATCTCATAAGCTTTGAGTATTGGGGGATGTCTTATCTATCCTTTCCCTTTCTCTCCTTTTGTATACTTGATTTCTTCATTAGAAGCTTGTGTCCCTAAAAGAACGTAATTTTGGCTATTCTTTGGGATTATTGACTAGAAAGGAATGAAAGGTTTATAAAGGGGGTTGAATAGGTCCTTTCTGTTCCGTAACCTCCTCTTAGGTGGCTGTGCCATTTTTCCATATGATTAATGCTAAATGGGAAGTGTTTTTCCAATATTATTTGGCTTGAGTTAGGGCTATGCTATCTCCCCCCTTTCTTTATGTATCTCTTTTTAACAAAAGTTTGATTTGTTACCTTCTTTTCTGTCTTCTTTTTTCCAGGTATGCACATCAGAAGATTCTTGTAGATATGCAAGAATCAGTGAGCTTTTTGTATATGAGAAATTCAATAGAGTCCCTGTAGGGAAGGTGCAGGCTGGTGACATATGTGCGGTTTGTGGAGTTGATGATATTCAGGTAAAAGTGAATTCAGTTTTTGCAAAGCTTTTGTTCTTTTATTGAAATTTGTTCTTGTTGTTTTCGAAATCTTTATTGTGGATATCATGTGCTCAGATTGGTGAGACAATTGCTGACAAACAATATGGAAAACCATTACCTGCTATTAAGGTGGAAGAACCGACAGTAAAGATGTCATTCTCAATTAACACTTCTCCTTTTGTTGGTCGTGAGGTATGTCTGAATGATACTACCGGAAGTCCTAGTTTTTCTTTCCTTTAAACAAATATTTATATGTTTTTCTTGTAAGAAGCTAATTTGATTGAATAATTGAAAATACAAAAGGGAGAGGATGAAAAGCAGAGCTTCACGCCAAGGAAGATTGCAAAAATTTCTTCCAAGTATCACAAAGGGAAGGGATTGAGGAAGGGAGAGGGTCCCATTCATGCAGGTGGGAAGTGGTGATGAAGCTAGTGGATGAGGGGGTTTGGAGATAGGAAACTTAAGAGCCTGTTAAGAGTGCGTTCTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTGGGCTTTCCCAGAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCAATCCCTAAATTAGCCGATGTGGGACTTCCATCATCCAACACGTTCTTGGCTAAATGGCTTTGGCATTTCCATCATGAGGAACTTCCTCTGGGGGGGGCTAGCTCTGATGGGAGCTGTCATAAAGAAAAATGGAATCTAGGTGCCTGAGTTGGAAAAACTTATGAAAAAGAAAATTAAGGTTCTCGTTAAGAAATGGTTTTGGAGACTCTAGATAAGGTGTTGAGATGCTGGAAAGTTTTCATTACCATGTGAGCTTAGTCGGATGGATATGTTACCTATTCCTTTCGTTTTTTTTTTCTTTTCTTTTTTTCATTGAGCGAGATTCTTATTTACTATCTCAAAAAAAAACATCTCTACAAGTGCTGCATAATTGAAGAATACAAAAGACAAAATGTCTGTCTAAATTACAACTAGAAAAAAAATGTAAGGTTTTATATGTGTTGTTATATTGAATTGCAGGGCAAGTATGTCACTAGTAGAAACTTAAGGGATCGACTCTACCGGGAGCTTGAGCGTAATTTGGCAATGAAAGTTGAAGATGGTGAAACAGCAGATACGTTCATTGTTAGTGGTCGGGGTACCTTGCATATCACAATACTTATAGAGAACATGTAAGAATTTCATATTCAGGATGATCCACCTTTTCCTGTATACTTCTTCTAATGACTAATAAGTTCATTCATTTCAGGCGGAGGGAAGGATATGAATTTATGGTGGGACCTCCTAGAGTAATAACCAAAAGGGTGAATGACCAATTGGTGGAACCATATGAGGTAAGTTTCTAATTGTTATATGATGCAGGACAGTGTTGGAAAATTTTAATGGAATTGATTCACTGCTAAATTTTTTAAGTTTTAAGTTCTGTAGATTATACAGGATTTAAAAATTGTGAATACTGGAATAGAATACACTGTTTGAAGGTTTTTTAGAATAAAAATTCTGTGAAAACTTACTTGGACAACTATTTTAAAAAGTTATTATCTTCCTTTTGTTCTCCTTGAGCATGTTTTTTCTGTTCACATATAACATGTTCTTCAGAATACAGATGTATTTTCCCAAAACATAGGGATTCGGGTGAGCACATTAACTCCCATATTTACGATTCAATCAAGCTATTAGAAGCATCTTTGGAAAAGAAAAAAAAATAATCTAAAAACAGTTCCCTGAACGCATAAAGAACCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAGAAATTGTAGAATATTACACCACCTTATGAATCCTTATGGGATTTTGACTGGAAACCGCAAGTCTTAACAACTAAGGCTGCGATAGCTGTTTTTGAGGACCACCCTAATAAATCTAATTAAGATTACGATTTCAAGATATGAGGGACTTCGAGTATGTCCAAGATTGTAACTAATGCACAAAGTCTAACAGTTTACCAAATCAGAAAACTGAAATTTAATAATAATGTAATGTGTAAAATACAGTAGACACTTTTCTTTGGCTCCTTATTGTAATCCTGCGTTGAACACATTTGATTTGAAGATAGGAAAAAAAATCCATTATGAAATTCGTTAAGAATGAATCTATGAATTAGATTGTCAAAGCATTTTTATTTTAATACAGTTTCCATATGAAACTTGTTTTTCATCTAGTTTCCTTACATGCACGTGCTTCATCTTTTTAACAGTATTGCTTACAGTGACACATTTGATTGACTTCTTATATCAGTGACATTCATAATCATAACAAGTAAAACTGCCGTGCAGATTGCCACTGTGGAAGTACCAGAAGAACACATGGGAGCAGTTGTAGAACTGTTGGGCAAGAGGCGTGGACAGATGTTCGATATGGAGGGTGTAGGGTTTGTACACGTCTCTTTGATTTCTGTTCCCTCAATCAAAACATTGACACGTTGGATGTGATTTGGTTAATACTTTCAACAATGTCATCATACGAACTGATGATCAGAGAATTAGTAGCTTGACTAATGTGTTGAGTTTGATAACACAATGACTTGACAATCAACATGACATACCTATAGTATCGTGAGCTTAAATTTAGGTTCACAAATAGGCGACATCCAGTAGTATTTAAACAACTCATCTCATTGTTAAAACTCTATCTAGGAGAGGCCTGTATCACAAATTTAATAGAGGACGGTGGCATACTGTTGCTGTTACTGCGACTTACTAATCCACATGCATAGCATATTTACATTCTGATGATGTTAAATAATGTATGTACTATGCTATAGGATATTTTATCAAAATTGTGCTCTATTATTCGAGAATCATCTACATTTTCTATGTGCAGTCTTTACCTATAATGAGGAAGGGTCATAAGTGAATTTTACTTTTGTTACTTAGAGCAGTTTTAATTCTTCTAATTTCTATCAATACCTATTTCCAGGTCTGAAGGGACGACTTTTCTGAGGTATAAGATTCCAACTCGGGGGCTTCTTGGATTAAGAAATGCCATTTTAACAGCTTCACGTGGCACAGCAATTCTCAACACAATATTTGATTCTTACGGACCTTGGGCTGGTGACATTCACACTCGTGATCAGGGTTCACTGGTAACTTAATTATCTTGTTACGTGAATTATTTTGATGGGGAGCTTTAACTATTGCTTTAAATATTTGGGGGTTCCATATGTGAAGAATTATTCTGGCATGTTCTGTATTTGTTCTTGTTTGGTTTTGGCGGTAGAATGTTGAAAAGTTTTCCTGTAGCCTCGGCCTTTCTTCTTGCGTTCAAATCTTTTTATTGGAACTGTTGCTTCTCTTGTTATTACAAAAAAAAAAAAAAAAATGCTGCTTTTATGTGTTTTGCTTGGTTTACGGCTGTAGCCAGTAAGAGACCTTGTGAATTAGTGTGAGGGAAGTTTGTCTCACTTTTCCTCCCACTATATATCTGCAGTCTTTTAATATAGTTTATATTCTATTATTGATCCCCTGAACTTCATGTTTAGATGTTTTGTTCCGTTAATTTTCAATATTTTGATTTGTTCTTTCAACTTTGAAATGTTTTGTTTTAGTCTATTTTAGTCCTAACGATTAGTTTTCCATTTATCAATAAACAATAACAGAATGCATAAAAGTTTAGAGACAAAAACAGAAATTTAATATTTTGAAACACAACTTATTTTTAACTCTTGCAATGCTATCATTTTTATCTTGTGAAAATTTATGATAAAGGATATGTAATAAAAAAAAGCGTGTGTTATACTTCTGACTCATCGAAAAATTAAATAATGCCTGATGAAGCTGGTGCGAATGATTTTTCAGGTTGCTTTTGAGGAAGGCACAACAACATCTTATGCCCTTGCTAGTTCACAGGAGAGAGGGCAGATGTTTGTGAGTCCTGGCATAGATGTTTACAAAGGTCAAATAGTTGGAATTCATCAACGGCCTGGGGACTTATCCCTTAACGTGTGCAAGAAAAAAGCTGCCACAAACGTTCGCTCCAACAAAGAACAAACAGGTGAGAACAACTCAGTCACCTCAATTATTTTTTTAATGCTGAGGTTGGAGTCTTACCTCCGCTTTAGTTTTTAACTCAAAATAGATATTGCACTTAGGATCCTCCTCACCTGCCACCATTACAAACTCCTCTCTTAGGGTACGGGTACTATTAATCAAATGCTTTTCGTCAATTAGAAACAGTTTTTGGTTACGTAATCAATAATTATTCTGAAAAATATGAAGACAAGTTAAAAGCACCTTAAAATGAATTTGTTATTAGAAAATTTAACCGTAAAGTAGTGGTAGAGACTTAAGATTTATTGAATGCACATGGACTAAATATGAACATATAAAGGTTTAAAAGAGAATAAGTCCCAACCTAGACCAAAATGATACCTACCCTATCAAATACTTGGAAAAAAATTCTTCTATATTCATTTTAGAAATATAAGAGATGAAGTTACACTAAATAATTTTTTTGCCTTTTTGCAGTGGTTCTCGACACCCCATTGGATTATAGTTTAGATGACTGTATTGAGTACATTCAAGAAGATGAACTGGTTGAAGTCACTCCCTCGAGCATCCGAATGTGCAAAAATGCAAAACTTACGAAGAAAACAAGGTAGATATTTGTTACCAAGAAACTTCACAGTACGAAAAACGCGGTTATGATAGTCTCTATACTGCAGCAATATTTGTTTGAATTCATAAGCTTTAACAGAGCTTTTAGTCAATACTAAATGGTTTAAGCATCAAGCTACCATCTACAATAGTTTGTATTATTTGTACATAAGAGAGGACAAGACATTACCATCCAAAGGGGTGATTGATTGGTAGAAACTAGAAAGTGAACCAGCCTCCTTTTTCCCTTATATTTTGAACGTAATTTTGACCTCTGCTGTTGCTTGGAGGTTTCCTTGGCTCCAATCATATCATATTAGTCTATTTTTACTTTTGCAATATGCTTGTTTATTTGCACGCGATGTTTTGTTTTGATTTGATTTTGATTTTGCTTACTTTATAG

mRNA sequence

CTAATACCAAACAAATGGATTAAACAAAATCCTCAACACTTTGTAAGGCGGGACGAGGCCTCATTTTACAGCCTCAATTGCCAAATCCTTCACTCTCCCTTCAGCAAGAGAGAGAAGAGAGCCGGCCAGAGCAGCCATGGAAATGGTAATGACCTTCAGCAGCTCCTTATCCTCTTCCCCACTGGTTTACCCCAAAATCAAACTCGGAACAGTCTTCACTCCTCAAATTAAGCAGCTCCATGGCCTCACTTCGTCCTCCAGGATTTCAACTTCATTGCCTAAACAAGCTCTCAGCTCTCGTTCGAGAGTTCCAATTCGATGTCCGGTCAAATGCTCTGTCTCTGAAGCTACTGAAGCCCGCACCGAGAAGAGCCAACTGATGAGGAGACAAGATATAAGGAACATAGCCATAGTGGCTCATGTAGACCATGGAAAGACAACTTTGGTTGATGCTATGTTGAAACAAGCAAAGGTATTTCGTGACAACCAAGTTGTGAAAGAAAGAATAATGGATTCAAATGACTTAGAGCGTGAAAGAGGAATTACAATACTGAGCAAAAATACATCTATTACATATAAGGATACAAAGATCAATATTATTGACACTCCTGGGCACTCTGATTTTGGCGGTGAAGTTGAACGCATTCTCAATATGGTGGAAGGGATTCTTCTTGTGGTAGATTCTGTTGAAGGTCCAATGCCACAAACAAGATTTGTGCTTAAGAAGGCCCTAGAGTTTGGGCATGCTGTTGTTGTCGTGGTCAACAAGATTGATAGACCTTCAGCTCGTCCAGATTATGTGATCAATTCCACTTTTGAACTATTTATTGAACTGAACGCATCAGATGAACAGTGCGACTTCCAAGTGATTTACGCTAGTGGCATTCAAGGTAAGGCTGGATTATCTCCTGAAAAATTGGGAGAAGATCTTGGACCACTTTTTGAGTCTATAATCAGATGCATCCCTGGACCACGTATTGACAAAGATGGTGCATTGCAAATGCTTGCTACAAATATTGAATACGACGAGCACAAAGGAAGGATAGCCATTGGTCGACTGCATGCTGGAGAACTGCAAAAAGGAATGGATGTGAAGGTATGCACATCAGAAGATTCTTGTAGATATGCAAGAATCAGTGAGCTTTTTGTATATGAGAAATTCAATAGAGTCCCTGTAGGGAAGGTGCAGGCTGGTGACATATGTGCGGTTTGTGGAGTTGATGATATTCAGATTGGTGAGACAATTGCTGACAAACAATATGGAAAACCATTACCTGCTATTAAGGTGGAAGAACCGACAGTAAAGATGTCATTCTCAATTAACACTTCTCCTTTTGTTGGTCGTGAGGGCAAGTATGTCACTAGTAGAAACTTAAGGGATCGACTCTACCGGGAGCTTGAGCGTAATTTGGCAATGAAAGTTGAAGATGGTGAAACAGCAGATACGTTCATTGTTAGTGGTCGGGGTACCTTGCATATCACAATACTTATAGAGAACATGCGGAGGGAAGGATATGAATTTATGGTGGGACCTCCTAGAGTAATAACCAAAAGGGTGAATGACCAATTGGTGGAACCATATGAGATTGCCACTGTGGAAGTACCAGAAGAACACATGGGAGCAGTTGTAGAACTGTTGGGCAAGAGGCGTGGACAGATGTTCGATATGGAGGGTGTAGGGTCTGAAGGGACGACTTTTCTGAGGTATAAGATTCCAACTCGGGGGCTTCTTGGATTAAGAAATGCCATTTTAACAGCTTCACGTGGCACAGCAATTCTCAACACAATATTTGATTCTTACGGACCTTGGGCTGGTGACATTCACACTCGTGATCAGGGTTCACTGGTTGCTTTTGAGGAAGGCACAACAACATCTTATGCCCTTGCTAGTTCACAGGAGAGAGGGCAGATGTTTGTGAGTCCTGGCATAGATGTTTACAAAGGTCAAATAGTTGGAATTCATCAACGGCCTGGGGACTTATCCCTTAACGTGTGCAAGAAAAAAGCTGCCACAAACGTTCGCTCCAACAAAGAACAAACAGTGGTTCTCGACACCCCATTGGATTATAGTTTAGATGACTGTATTGAGTACATTCAAGAAGATGAACTGGTTGAAGTCACTCCCTCGAGCATCCGAATGTGCAAAAATGCAAAACTTACGAAGAAAACAAGGTAGATATTTGTTACCAAGAAACTTCACAGTACGAAAAACGCGGTTATGATAGTCTCTATACTGCAGCAATATTTGTTTGAATTCATAAGCTTTAACAGAGCTTTTAGTCAATACTAAATGGTTTAAGCATCAAGCTACCATCTACAATAGTTTGTATTATTTGTACATAAGAGAGGACAAGACATTACCATCCAAAGGGGTGATTGATTGGTAGAAACTAGAAAGTGAACCAGCCTCCTTTTTCCCTTATATTTTGAACGTAATTTTGACCTCTGCTGTTGCTTGGAGGTTTCCTTGGCTCCAATCATATCATATTAGTCTATTTTTACTTTTGCAATATGCTTGTTTATTTGCACGCGATGTTTTGTTTTGATTTGATTTTGATTTTGCTTACTTTATAG

Coding sequence (CDS)

ATGGAAATGGTAATGACCTTCAGCAGCTCCTTATCCTCTTCCCCACTGGTTTACCCCAAAATCAAACTCGGAACAGTCTTCACTCCTCAAATTAAGCAGCTCCATGGCCTCACTTCGTCCTCCAGGATTTCAACTTCATTGCCTAAACAAGCTCTCAGCTCTCGTTCGAGAGTTCCAATTCGATGTCCGGTCAAATGCTCTGTCTCTGAAGCTACTGAAGCCCGCACCGAGAAGAGCCAACTGATGAGGAGACAAGATATAAGGAACATAGCCATAGTGGCTCATGTAGACCATGGAAAGACAACTTTGGTTGATGCTATGTTGAAACAAGCAAAGGTATTTCGTGACAACCAAGTTGTGAAAGAAAGAATAATGGATTCAAATGACTTAGAGCGTGAAAGAGGAATTACAATACTGAGCAAAAATACATCTATTACATATAAGGATACAAAGATCAATATTATTGACACTCCTGGGCACTCTGATTTTGGCGGTGAAGTTGAACGCATTCTCAATATGGTGGAAGGGATTCTTCTTGTGGTAGATTCTGTTGAAGGTCCAATGCCACAAACAAGATTTGTGCTTAAGAAGGCCCTAGAGTTTGGGCATGCTGTTGTTGTCGTGGTCAACAAGATTGATAGACCTTCAGCTCGTCCAGATTATGTGATCAATTCCACTTTTGAACTATTTATTGAACTGAACGCATCAGATGAACAGTGCGACTTCCAAGTGATTTACGCTAGTGGCATTCAAGGTAAGGCTGGATTATCTCCTGAAAAATTGGGAGAAGATCTTGGACCACTTTTTGAGTCTATAATCAGATGCATCCCTGGACCACGTATTGACAAAGATGGTGCATTGCAAATGCTTGCTACAAATATTGAATACGACGAGCACAAAGGAAGGATAGCCATTGGTCGACTGCATGCTGGAGAACTGCAAAAAGGAATGGATGTGAAGGTATGCACATCAGAAGATTCTTGTAGATATGCAAGAATCAGTGAGCTTTTTGTATATGAGAAATTCAATAGAGTCCCTGTAGGGAAGGTGCAGGCTGGTGACATATGTGCGGTTTGTGGAGTTGATGATATTCAGATTGGTGAGACAATTGCTGACAAACAATATGGAAAACCATTACCTGCTATTAAGGTGGAAGAACCGACAGTAAAGATGTCATTCTCAATTAACACTTCTCCTTTTGTTGGTCGTGAGGGCAAGTATGTCACTAGTAGAAACTTAAGGGATCGACTCTACCGGGAGCTTGAGCGTAATTTGGCAATGAAAGTTGAAGATGGTGAAACAGCAGATACGTTCATTGTTAGTGGTCGGGGTACCTTGCATATCACAATACTTATAGAGAACATGCGGAGGGAAGGATATGAATTTATGGTGGGACCTCCTAGAGTAATAACCAAAAGGGTGAATGACCAATTGGTGGAACCATATGAGATTGCCACTGTGGAAGTACCAGAAGAACACATGGGAGCAGTTGTAGAACTGTTGGGCAAGAGGCGTGGACAGATGTTCGATATGGAGGGTGTAGGGTCTGAAGGGACGACTTTTCTGAGGTATAAGATTCCAACTCGGGGGCTTCTTGGATTAAGAAATGCCATTTTAACAGCTTCACGTGGCACAGCAATTCTCAACACAATATTTGATTCTTACGGACCTTGGGCTGGTGACATTCACACTCGTGATCAGGGTTCACTGGTTGCTTTTGAGGAAGGCACAACAACATCTTATGCCCTTGCTAGTTCACAGGAGAGAGGGCAGATGTTTGTGAGTCCTGGCATAGATGTTTACAAAGGTCAAATAGTTGGAATTCATCAACGGCCTGGGGACTTATCCCTTAACGTGTGCAAGAAAAAAGCTGCCACAAACGTTCGCTCCAACAAAGAACAAACAGTGGTTCTCGACACCCCATTGGATTATAGTTTAGATGACTGTATTGAGTACATTCAAGAAGATGAACTGGTTGAAGTCACTCCCTCGAGCATCCGAATGTGCAAAAATGCAAAACTTACGAAGAAAACAAGGTAG

Protein sequence

MEMVMTFSSSLSSSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSSRSRVPIRCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVVKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQCDFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCGVDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDVYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVEVTPSSIRMCKNAKLTKKTR

Homology

[Close]

BLAST of CmoCh06G000440 vs. ExPASy Swiss-Prot
Match: F4K410 (Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SVR3 PE=1 SV=1)

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 551/688 (80.09%), Postives = 609/688 (88.52%), Query Frame = 0


Query: 1   MEMVMTFSSS------LSSSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSS 60
           ME+ ++ SS+        +SPL++ +  LG  F   +K   G              AL  
Sbjct: 1   MELSLSTSSASPAVLRRQASPLLHKQQVLGVSFASALKPGGG--------------ALRF 60

Query: 61  RSRVPIRCPVKCSVSEAT---EARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQA 120
            SR P+  P+ CS S +T    +  +K QL RR ++RNIAIVAHVDHGKTTLVD+ML+QA
Sbjct: 61  PSRRPLPRPITCSASPSTAEPASEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQA 120

Query: 121 KVFRDNQVVKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERIL 180
           KVFRDNQV++ERIMDSNDLERERGITILSKNTSITYK+TK+NIIDTPGHSDFGGEVER+L
Sbjct: 121 KVFRDNQVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVL 180

Query: 181 NMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFI 240
           NMV+G+LLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARP++V+NSTFELFI
Sbjct: 181 NMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPEFVVNSTFELFI 240

Query: 241 ELNASDEQCDFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLA 300
           ELNA+DEQCDFQ IYASGI+GKAGLSP+ L EDLGPLFE+IIRC+PGP I+KDGALQMLA
Sbjct: 241 ELNATDEQCDFQAIYASGIKGKAGLSPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQMLA 300

Query: 301 TNIEYDEHKGRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQ 360
           TNIEYDEHKGRIAIGRLHAG L+KGMDV+VCTSEDSCR+AR+SELFVYEKF RVP   V+
Sbjct: 301 TNIEYDEHKGRIAIGRLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSVE 360

Query: 361 AGDICAVCGVDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSR 420
           AGDICAVCG+D+IQIGETIADK +GKPLP IKVEEPTVKMSFS+NTSPF GREGKYVTSR
Sbjct: 361 AGDICAVCGIDNIQIGETIADKVHGKPLPTIKVEEPTVKMSFSVNTSPFSGREGKYVTSR 420

Query: 421 NLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVIT 480
           NLRDRL RELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPP+VI 
Sbjct: 421 NLRDRLNRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVIN 480

Query: 481 KRVNDQLVEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGL 540
           KRVND+L+EPYEIATVEVPE HMG VVELLGKRRGQMFDM+GVGSEGTTFLRYKIPTRGL
Sbjct: 481 KRVNDKLLEPYEIATVEVPEAHMGPVVELLGKRRGQMFDMQGVGSEGTTFLRYKIPTRGL 540

Query: 541 LGLRNAILTASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQ 600
           LGLRNAILTASRGTAILNT+FDSYGPWAGDI TRD GSLVAFE+GT+TSYALAS+QERGQ
Sbjct: 541 LGLRNAILTASRGTAILNTVFDSYGPWAGDISTRDLGSLVAFEDGTSTSYALASAQERGQ 600

Query: 601 MFVSPGIDVYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIE 660
           MFV  G+DVYKGQIVGIHQRPGDL LN+CKKKAATN+RSNK+ TV+LDTPL YSLDDCIE
Sbjct: 601 MFVGSGVDVYKGQIVGIHQRPGDLGLNICKKKAATNIRSNKDVTVILDTPLTYSLDDCIE 660

Query: 661 YIQEDELVEVTPSSIRMCKNAKLTKKTR 680
           YI+EDELVEVTPSSIRMCKN K+ KK R
Sbjct: 661 YIEEDELVEVTPSSIRMCKNQKMAKKGR 674

[Close]

BLAST of CmoCh06G000440 vs. ExPASy Swiss-Prot
Match: P72749 (50S ribosomal subunit assembly factor BipA OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=bipA PE=3 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 1.4e-178
Identity = 316/594 (53.20%), Postives = 418/594 (70.37%), Query Frame = 0


Query: 87  IRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVVKERIMDSNDLERERGITILSKNTSIT 146
           IRN+AI+AHVDHGKTTLVDA+LKQ+ +FR+ + V   +MDSNDLERERGITILSKNT++ 
Sbjct: 5   IRNVAIIAHVDHGKTTLVDALLKQSGIFREGEDVPVCVMDSNDLERERGITILSKNTAVR 64

Query: 147 YKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVV 206
           Y+DT INI+DTPGH+DFGGEVER+L MV+G +L+VD+ EGPMPQTRFVLKKALE G   +
Sbjct: 65  YQDTLINIVDTPGHADFGGEVERVLGMVDGCVLIVDANEGPMPQTRFVLKKALEKGLRPL 124

Query: 207 VVVNKIDRPSARPDYVINSTFELFIELNASDEQCDFQVIYASGIQGKAGLSPEKLGEDLG 266
           VVVNKIDRP A P+  ++  F+LF+EL A D+QCDF  ++ASG+ G A  S +   ED+ 
Sbjct: 125 VVVNKIDRPRADPNTAVDKVFDLFVELGADDDQCDFTTLFASGLGGFAKESLDDDSEDMK 184

Query: 267 PLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIGRLHAGELQKGMDVKVCTSED 326
           PLFE+I+  +P P  D +  LQ+  T ++Y ++ GRI IGR+H G ++ G    +   + 
Sbjct: 185 PLFEAILHHVPPPAGDPNKPLQLQVTTLDYSDYLGRIIIGRIHNGTVKAGQQAALVKEDG 244

Query: 327 SCRYARISELFVYEKFNRVPVGKVQAGDICAVCGVDDIQIGETIADKQYGKPLPAIKVEE 386
           S    ++S+L  +E  NR+ + +  AG I A+ G  D  IGET+      + LP IKV+E
Sbjct: 245 SIAKGKVSKLLGFEGLNRIELPEASAGYIVAIAGFADANIGETLTCPDEPQALPLIKVDE 304

Query: 387 PTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTL 446
           PT++M+FS+N SPF G+EGK+VTSR +RDRL RELE N+A++VEDGE+A+ F+VSGRG L
Sbjct: 305 PTLQMTFSVNDSPFAGQEGKFVTSRQIRDRLNRELETNVALRVEDGESAEQFLVSGRGEL 364

Query: 447 HITILIENMRREGYEFMVGPPRVITKRVNDQLVEPYEIATVEVPEEHMGAVVELLGKRRG 506
           H+ ILIE MRREGYEF V  P+VI + VN Q  EP E   ++VPE  +GA +E LG+RRG
Sbjct: 365 HLGILIETMRREGYEFQVAQPQVIYREVNGQPCEPVEYLVLDVPEAAVGACIERLGQRRG 424

Query: 507 QMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDIHTRD 566
           +M DM+     G T L + IP RGLLG R   +  +RG  I+N  F  Y P +GD+ TR 
Sbjct: 425 EMQDMQ-TSVNGRTQLEFVIPARGLLGFRGDFIRITRGEGIMNHSFLEYRPMSGDLETRY 484

Query: 567 QGSLVAFEEGTTTSYALASSQERGQMFVSPGIDVYKGQIVGIHQRPGDLSLNVCKKKAAT 626
            G +VAFEEG  T YA+ ++++RG  F++PG  VYKG I+G H RP D+ LNVCK K  T
Sbjct: 485 NGVMVAFEEGVATFYAMKNAEDRGVFFITPGTKVYKGMIIGEHNRPQDIELNVCKTKQLT 544

Query: 627 NVRS-NKEQTVVLDTPLDYSLDDCIEYIQEDELVEVTPSSIRMCKNA--KLTKK 678
           N RS   ++ V L  P D +L+  +EYI  DELVE+TP SIR+ K A  KL K+
Sbjct: 545 NHRSATGDELVQLQAPEDMNLERALEYIGPDELVEITPESIRLRKVARKKLVKR 597

[Close]

BLAST of CmoCh06G000440 vs. ExPASy Swiss-Prot
Match: O07631 (50S ribosomal subunit assembly factor BipA OS=Bacillus subtilis (strain 168) OX=224308 GN=bipA PE=2 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 1.5e-169
Identity = 298/589 (50.59%), Postives = 412/589 (69.95%), Query Frame = 0


Query: 84  RQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVVKERIMDSNDLERERGITILSKNT 143
           R D+RNIAI+AHVDHGKTTLVD +L QA  FR N+ V ER MDSNDLERERGITIL+KNT
Sbjct: 4   RNDLRNIAIIAHVDHGKTTLVDQLLHQAGTFRANEQVAERAMDSNDLERERGITILAKNT 63

Query: 144 SITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGH 203
           +I YKDT+INI+DTPGH+DFGGEVERI+ MV+G++LVVD+ EG MPQTRFVLKKALE   
Sbjct: 64  AINYKDTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGCMPQTRFVLKKALEQNL 123

Query: 204 AVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQCDFQVIYASGIQGKAGLSPEKLGE 263
             VVVVNKIDR  ARP+ VI+   +LFIEL+A++EQ +F V+YAS I G A L P++  E
Sbjct: 124 NPVVVVNKIDRDFARPEEVIDEVLDLFIELDANEEQLEFPVVYASAINGTASLDPKQQDE 183

Query: 264 DLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIGRLHAGELQKGMDVKVCT 323
           ++  L+E+II+ +P P  + +  LQ     ++Y+++ GRI IGR+  G ++ G  V +  
Sbjct: 184 NMEALYETIIKHVPAPVDNAEEPLQFQVALLDYNDYVGRIGIGRVFRGTMKVGQQVSLMK 243

Query: 324 SEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCGVDDIQIGETIADKQYGKPLPAIK 383
            + + +  R++++F ++   RV + + +AGD+ AV G++DI +GET+    +  PLP ++
Sbjct: 244 LDGTAKSFRVTKIFGFQGLKRVEIEEAKAGDLVAVSGMEDINVGETVCPVDHQDPLPVLR 303

Query: 384 VEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGR 443
           ++EPT++M+F +N SPF GREGKYVT+R + +RL  +L+ +++++VE   + D ++VSGR
Sbjct: 304 IDEPTLQMTFVVNNSPFAGREGKYVTARKIEERLQSQLQTDVSLRVEPTASPDAWVVSGR 363

Query: 444 GTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVEPYEIATVEVPEEHMGAVVELLGK 503
           G LH++ILIENMRREGYE  V  P VI K ++    EP E   ++VPEEH G+V+E +G 
Sbjct: 364 GELHLSILIENMRREGYELQVSKPEVIIKEIDGVRCEPVERVQIDVPEEHTGSVMESMGA 423

Query: 504 RRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPW-AGDI 563
           R+G+M DM   G+ G   L + +P+RGL+G     L+ +RG  ILN  FDSY P  AG +
Sbjct: 424 RKGEMVDMINNGN-GQVRLIFTVPSRGLIGYSTEFLSLTRGFGILNHTFDSYQPMQAGQV 483

Query: 564 HTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDVYKGQIVGIHQRPGDLSLNVCKK 623
             R QG LV+ E G  TSY +   ++RG +FV PG +VY+G IVG H R  DL +NV K 
Sbjct: 484 GGRRQGVLVSMENGKATSYGIQGIEDRGVIFVEPGTEVYEGMIVGEHNRDNDLVVNVSKM 543

Query: 624 KAATNVRS-NKEQTVVLDTPLDYSLDDCIEYIQEDELVEVTPSSIRMCK 671
           K  TNVRS  K+QT  +      SL++ +EY+ EDE  EVTP SIR+ K
Sbjct: 544 KQQTNVRSATKDQTTTIKKARIMSLEESLEYLNEDEYCEVTPESIRLRK 591

[Close]

BLAST of CmoCh06G000440 vs. ExPASy Swiss-Prot
Match: H9L427 (50S ribosomal subunit assembly factor BipA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bipA PE=1 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 1.0e-165
Identity = 285/597 (47.74%), Postives = 417/597 (69.85%), Query Frame = 0


Query: 85  QDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVVKERIMDSNDLERERGITILSKNTS 144
           +++RNIAI+AHVDHGKTTLVD +L+Q+  F      +ER+MDSNDLE+ERGITIL+KNT+
Sbjct: 3   ENLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTA 62

Query: 145 ITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHA 204
           I + D +INI+DTPGH+DFGGEVER+++MV+ +LLVVD+ +GPMPQTRFV KKA   G  
Sbjct: 63  IKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLK 122

Query: 205 VVVVVNKIDRPSARPDYVINSTFELFIELNASDEQCDFQVIYASGIQGKAGLSPEKLGED 264
            +VV+NK+DRP ARPD+V++  F+LF+ L+A+DEQ DF +IYAS + G AGL  E + ED
Sbjct: 123 PIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAED 182

Query: 265 LGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIGRLHAGELQKGMDVKVCTS 324
           + PL+++I+  +P P +D DG LQM  + ++Y+ + G I IGR+  G+++    V +  S
Sbjct: 183 MTPLYQAIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS 242

Query: 325 EDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCGVDDIQIGETIADKQYGKPLPAIKV 384
           E   R A++ ++  +    R+     +AGDI A+ G+ ++ I +TI D Q  + LPA+ V
Sbjct: 243 EGKTRNAKVGKVLTHLGLERIDSNIAEAGDIIAITGLGELNISDTICDPQNVEALPALSV 302

Query: 385 EEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRG 444
           +EPTV M F +NTSPF G+EGK+VTSR + DRL +EL  N+A++VE+ E AD F VSGRG
Sbjct: 303 DEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRG 362

Query: 445 TLHITILIENMRREGYEFMVGPPRVITKRVNDQLVEPYEIATVEVPEEHMGAVVELLGKR 504
            LH+++LIENMRREG+E  V  P+VI + ++ +  EPYE  T++V E+H G+V++ LG+R
Sbjct: 363 ELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGER 422

Query: 505 RGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGP-WAGDIH 564
           +G + +M   G +G   L Y IP+RGL+G R+  +T + GT +L + F  Y     G++ 
Sbjct: 423 KGDLKNMNPDG-KGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDIRPGEVG 482

Query: 565 TRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDVYKGQIVGIHQRPGDLSLNVCKKK 624
            R  G L++  +G   ++AL   Q+RG++F+  G +VY+GQI+GIH R  DL++N    K
Sbjct: 483 QRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGK 542

Query: 625 AATNVR-SNKEQTVVLDTPLDYSLDDCIEYIQEDELVEVTPSSIRMCKNAKLTKKTR 680
             TN+R S  ++ V+L  P+  SL+  +E+I +DELVEVTP+SIR+ K   LT+  R
Sbjct: 543 KLTNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKR-HLTENDR 597

[Close]

BLAST of CmoCh06G000440 vs. ExPASy Swiss-Prot
Match: P0A3B2 (50S ribosomal subunit assembly factor BipA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) OX=574521 GN=bipA PE=1 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 5.0e-165
Identity = 282/597 (47.24%), Postives = 416/597 (69.68%), Query Frame = 0


Query: 85  QDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVVKERIMDSNDLERERGITILSKNTS 144
           + +RNIAI+AHVDHGKTTLVD +L+Q+  F      +ER+MDSNDLE+ERGITIL+KNT+
Sbjct: 3   EKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTA 62

Query: 145 ITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHA 204
           I + D +INI+DTPGH+DFGGEVER+++MV+ +LLVVD+ +GPMPQTRFV KKA  +G  
Sbjct: 63  IKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLK 122

Query: 205 VVVVVNKIDRPSARPDYVINSTFELFIELNASDEQCDFQVIYASGIQGKAGLSPEKLGED 264
            +VV+NK+DRP ARPD+V++  F+LF+ L+A+DEQ DF ++YAS + G AGL  E + ED
Sbjct: 123 PIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAED 182

Query: 265 LGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIGRLHAGELQKGMDVKVCTS 324
           + PL+++I+  +P P +D DG  QM  + ++Y+ + G I IGR+  G+++    V +  S
Sbjct: 183 MTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS 242

Query: 325 EDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCGVDDIQIGETIADKQYGKPLPAIKV 384
           E   R A++ ++  +    R+     +AGDI A+ G+ ++ I +T+ D Q  + LPA+ V
Sbjct: 243 EGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSV 302

Query: 385 EEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRG 444
           +EPTV M F +NTSPF G+EGK+VTSR + DRL +EL  N+A++VE+ E AD F VSGRG
Sbjct: 303 DEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRG 362

Query: 445 TLHITILIENMRREGYEFMVGPPRVITKRVNDQLVEPYEIATVEVPEEHMGAVVELLGKR 504
            LH+++LIENMRREG+E  V  P+VI + ++ +  EPYE  T++V E+H G+V++ LG+R
Sbjct: 363 ELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGER 422

Query: 505 RGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGP-WAGDIH 564
           +G + +M   G +G   L Y IP+RGL+G R+  +T + GT +L + F  Y     G++ 
Sbjct: 423 KGDLKNMNPDG-KGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEVG 482

Query: 565 TRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDVYKGQIVGIHQRPGDLSLNVCKKK 624
            R  G L++  +G   ++AL   Q+RG++F+  G +VY+GQI+GIH R  DL++N    K
Sbjct: 483 QRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGK 542

Query: 625 AATNVR-SNKEQTVVLDTPLDYSLDDCIEYIQEDELVEVTPSSIRMCKNAKLTKKTR 680
             TN+R S  ++ VVL  P+  +L+  +E+I +DELVEVTP+SIR+ K   LT+  R
Sbjct: 543 KLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKR-HLTENDR 597

[Close]

BLAST of CmoCh06G000440 vs. ExPASy TrEMBL
Match: A0A6J1FHM0 (putative elongation factor TypA-like SVR3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445429 PE=4 SV=1)

HSP 1 Score: 1338.9 bits (3464), Expect = 0.0e+00
Identity = 679/679 (100.00%), Postives = 679/679 (100.00%), Query Frame = 0


Query: 1   MEMVMTFSSSLSSSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSSRSRVPI 60
           MEMVMTFSSSLSSSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSSRSRVPI
Sbjct: 1   MEMVMTFSSSLSSSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSSRSRVPI 60

Query: 61  RCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVV 120
           RCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVV
Sbjct: 61  RCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVV 120

Query: 121 KERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLV 180
           KERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLV
Sbjct: 121 KERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLV 180

Query: 181 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQC 240
           VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQC
Sbjct: 181 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQC 240

Query: 241 DFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHK 300
           DFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHK
Sbjct: 241 DFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHK 300

Query: 301 GRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCG 360
           GRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCG
Sbjct: 301 GRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCG 360

Query: 361 VDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRE 420
           VDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRE
Sbjct: 361 VDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRE 420

Query: 421 LERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVE 480
           LERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVE
Sbjct: 421 LERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVE 480

Query: 481 PYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILT 540
           PYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILT
Sbjct: 481 PYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILT 540

Query: 541 ASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDV 600
           ASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDV
Sbjct: 541 ASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDV 600

Query: 601 YKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVE 660
           YKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVE
Sbjct: 601 YKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVE 660

Query: 661 VTPSSIRMCKNAKLTKKTR 680
           VTPSSIRMCKNAKLTKKTR
Sbjct: 661 VTPSSIRMCKNAKLTKKTR 679

[Close]

BLAST of CmoCh06G000440 vs. ExPASy TrEMBL
Match: A0A6J1I1E0 (putative elongation factor TypA-like SVR3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470012 PE=4 SV=1)

HSP 1 Score: 1331.6 bits (3445), Expect = 0.0e+00
Identity = 675/679 (99.41%), Postives = 677/679 (99.71%), Query Frame = 0


Query: 1   MEMVMTFSSSLSSSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSSRSRVPI 60
           MEMVMTFSSSLSSSPLVYP IKLGTVFTPQIKQLH LTSSSRISTSLPKQALSSRSRVPI
Sbjct: 1   MEMVMTFSSSLSSSPLVYPIIKLGTVFTPQIKQLHALTSSSRISTSLPKQALSSRSRVPI 60

Query: 61  RCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVV 120
           RCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVV
Sbjct: 61  RCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVV 120

Query: 121 KERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLV 180
           KERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLV
Sbjct: 121 KERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLV 180

Query: 181 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQC 240
           VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQC
Sbjct: 181 VDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQC 240

Query: 241 DFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHK 300
           DFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHK
Sbjct: 241 DFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHK 300

Query: 301 GRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCG 360
           GRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCG
Sbjct: 301 GRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCG 360

Query: 361 VDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRE 420
           VDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRE
Sbjct: 361 VDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRE 420

Query: 421 LERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVE 480
           LERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVE
Sbjct: 421 LERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVE 480

Query: 481 PYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILT 540
           PYEIATVEVPEEHMG+VVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILT
Sbjct: 481 PYEIATVEVPEEHMGSVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAILT 540

Query: 541 ASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDV 600
           ASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPG+DV
Sbjct: 541 ASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGLDV 600

Query: 601 YKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVE 660
           YKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVE
Sbjct: 601 YKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVE 660

Query: 661 VTPSSIRMCKNAKLTKKTR 680
           VTPSSIRMCKNAKLTKKTR
Sbjct: 661 VTPSSIRMCKNAKLTKKTR 679

[Close]

BLAST of CmoCh06G000440 vs. ExPASy TrEMBL
Match: A0A6J1DDT1 (putative elongation factor TypA-like SVR3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019848 PE=4 SV=1)

HSP 1 Score: 1261.1 bits (3262), Expect = 0.0e+00
Identity = 639/680 (93.97%), Postives = 655/680 (96.32%), Query Frame = 0


Query: 1   MEMVMTFSSSLSSSPLVY-PKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSSRSRVP 60
           MEMVM+F +  SSSPL+Y PK K+G  FTP  KQ  GL+SSSR STS+PKQAL   SR P
Sbjct: 1   MEMVMSFHA--SSSPLLYNPKFKVGRAFTPLSKQFDGLSSSSRTSTSIPKQALKVCSRTP 60

Query: 61  IRCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV 120
           +R PVKCS S+ATEART KSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV
Sbjct: 61  LRTPVKCSASQATEARTAKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV 120

Query: 121 VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL 180
           VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL
Sbjct: 121 VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL 180

Query: 181 VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ 240
           VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ
Sbjct: 181 VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ 240

Query: 241 CDFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEH 300
           CDFQ IYASGIQGKAGLSPEKL EDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEH
Sbjct: 241 CDFQAIYASGIQGKAGLSPEKLAEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEH 300

Query: 301 KGRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVC 360
           KGRIAIGRLHAGELQKGMDVKVCT+EDSCRYARISELFVYEKF+RVPV KVQAGDICAVC
Sbjct: 301 KGRIAIGRLHAGELQKGMDVKVCTTEDSCRYARISELFVYEKFSRVPVDKVQAGDICAVC 360

Query: 361 GVDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYR 420
           GVDDIQIGETIADKQYGKPLPAIKVEEPTVKM+F+INTSPFVGREGKYVTSRNLRDRLYR
Sbjct: 361 GVDDIQIGETIADKQYGKPLPAIKVEEPTVKMAFAINTSPFVGREGKYVTSRNLRDRLYR 420

Query: 421 ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLV 480
           ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITK+VNDQLV
Sbjct: 421 ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKKVNDQLV 480

Query: 481 EPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAIL 540
           EPYEIATVEVPEEHMGAVVELLGKRRGQMFDM+GVGSEGTTFLRYKIPTRGLLGLRNAIL
Sbjct: 481 EPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTFLRYKIPTRGLLGLRNAIL 540

Query: 541 TASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGID 600
           TASRGTAILNTIFD YGPWAGDIHTRDQGSLVAFEEGTTTSYAL SSQERGQMFVSPG+D
Sbjct: 541 TASRGTAILNTIFDCYGPWAGDIHTRDQGSLVAFEEGTTTSYALCSSQERGQMFVSPGVD 600

Query: 601 VYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV 660
           VYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV
Sbjct: 601 VYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV 660

Query: 661 EVTPSSIRMCKNAKLTKKTR 680
           EVTPSSIRMCKNAK+ KKTR
Sbjct: 661 EVTPSSIRMCKNAKMAKKTR 678

[Close]

BLAST of CmoCh06G000440 vs. ExPASy TrEMBL
Match: A0A5A7UJP9 (GTP-binding protein TypA/BipA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006250 PE=4 SV=1)

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 635/680 (93.38%), Postives = 656/680 (96.47%), Query Frame = 0


Query: 1   MEMVMTFSSSLS-SSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSSRSRVP 60
           MEMVM+F SS S SSPL+YPK+KLG  FTP I  L  L+SSSR S SLPKQAL  RS+ P
Sbjct: 1   MEMVMSFISSPSTSSPLLYPKLKLGRTFTPLINHLDCLSSSSRTSVSLPKQALKFRSKTP 60

Query: 61  IRCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV 120
           +R PVKCSVS+ +EA T KSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV
Sbjct: 61  VRSPVKCSVSQTSEAPTAKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV 120

Query: 121 VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL 180
           VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL
Sbjct: 121 VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL 180

Query: 181 VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ 240
           VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ
Sbjct: 181 VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ 240

Query: 241 CDFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEH 300
           CDFQ IYASGIQGKAGLSPEKL EDLGPLFESIIRCIPGP+IDKDGALQMLATNIEYDEH
Sbjct: 241 CDFQAIYASGIQGKAGLSPEKLAEDLGPLFESIIRCIPGPQIDKDGALQMLATNIEYDEH 300

Query: 301 KGRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVC 360
           KGRIAIGRLHAGELQKGMDVKVCT+ED+CR+ARISELFVYEKF+RVPV KVQAGDICAVC
Sbjct: 301 KGRIAIGRLHAGELQKGMDVKVCTTEDACRFARISELFVYEKFSRVPVEKVQAGDICAVC 360

Query: 361 GVDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYR 420
           GVDDIQIGETIADKQYGKPLPAIKVEEPTVKM+F+INTSPFVGREGKYVTSRNLRDRLYR
Sbjct: 361 GVDDIQIGETIADKQYGKPLPAIKVEEPTVKMAFAINTSPFVGREGKYVTSRNLRDRLYR 420

Query: 421 ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLV 480
           ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITK+VND+LV
Sbjct: 421 ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKKVNDKLV 480

Query: 481 EPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAIL 540
           EPYEIATVEVPEEHMGAVVELLGKRRGQMFDM+GVGSEGTTFLRYKIPTRGLLGLRNAIL
Sbjct: 481 EPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTFLRYKIPTRGLLGLRNAIL 540

Query: 541 TASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGID 600
           TASRGTAILNTIFD YGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPG+D
Sbjct: 541 TASRGTAILNTIFDCYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGVD 600

Query: 601 VYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV 660
           VYKGQIVGIHQRPGDL+LNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV
Sbjct: 601 VYKGQIVGIHQRPGDLALNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV 660

Query: 661 EVTPSSIRMCKNAKLTKKTR 680
           EVTPSSIRMCKNAK+ KKTR
Sbjct: 661 EVTPSSIRMCKNAKMAKKTR 680

[Close]

BLAST of CmoCh06G000440 vs. ExPASy TrEMBL
Match: E5GBY4 (GTP-binding protein type a OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 635/680 (93.38%), Postives = 656/680 (96.47%), Query Frame = 0


Query: 1   MEMVMTFSSSLS-SSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSSRSRVP 60
           MEMVM+F SS S SSPL+YPK+KLG  FTP I  L  L+SSSR S SLPKQAL  RS+ P
Sbjct: 1   MEMVMSFISSPSTSSPLLYPKLKLGRTFTPLINHLDCLSSSSRTSVSLPKQALKFRSKTP 60

Query: 61  IRCPVKCSVSEATEARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV 120
           +R PVKCSVS+ +EA T KSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV
Sbjct: 61  VRSPVKCSVSQTSEAPTAKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQV 120

Query: 121 VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL 180
           VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL
Sbjct: 121 VKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILL 180

Query: 181 VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ 240
           VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ
Sbjct: 181 VVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNASDEQ 240

Query: 241 CDFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEH 300
           CDFQ IYASGIQGKAGLSPEKL EDLGPLFESIIRCIPGP+IDKDGALQMLATNIEYDEH
Sbjct: 241 CDFQAIYASGIQGKAGLSPEKLAEDLGPLFESIIRCIPGPQIDKDGALQMLATNIEYDEH 300

Query: 301 KGRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVC 360
           KGRIAIGRLHAGELQKGMDVKVCT+ED+CR+ARISELFVYEKF+RVPV KVQAGDICAVC
Sbjct: 301 KGRIAIGRLHAGELQKGMDVKVCTTEDACRFARISELFVYEKFSRVPVEKVQAGDICAVC 360

Query: 361 GVDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYR 420
           GVDDIQIGETIADKQYGKPLPAIKVEEPTVKM+F+INTSPFVGREGKYVTSRNLRDRLYR
Sbjct: 361 GVDDIQIGETIADKQYGKPLPAIKVEEPTVKMAFAINTSPFVGREGKYVTSRNLRDRLYR 420

Query: 421 ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLV 480
           ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITK+VND+LV
Sbjct: 421 ELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKKVNDKLV 480

Query: 481 EPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGLLGLRNAIL 540
           EPYEIATVEVPEEHMGAVVELLGKRRGQMFDM+GVGSEGTTFLRYKIPTRGLLGLRNAIL
Sbjct: 481 EPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTFLRYKIPTRGLLGLRNAIL 540

Query: 541 TASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGID 600
           TASRGTAILNTIFD YGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPG+D
Sbjct: 541 TASRGTAILNTIFDCYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGVD 600

Query: 601 VYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV 660
           VYKGQIVGIHQRPGDL+LNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV
Sbjct: 601 VYKGQIVGIHQRPGDLALNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDELV 660

Query: 661 EVTPSSIRMCKNAKLTKKTR 680
           EVTPSSIRMCKNAK+ KKTR
Sbjct: 661 EVTPSSIRMCKNAKMAKKTR 680

[Close]

BLAST of CmoCh06G000440 vs. TAIR 10
Match: AT5G13650.1 (elongation factor family protein )

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 551/688 (80.09%), Postives = 609/688 (88.52%), Query Frame = 0


Query: 1   MEMVMTFSSS------LSSSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSS 60
           ME+ ++ SS+        +SPL++ +  LG  F   +K   G              AL  
Sbjct: 1   MELSLSTSSASPAVLRRQASPLLHKQQVLGVSFASALKPGGG--------------ALRF 60

Query: 61  RSRVPIRCPVKCSVSEAT---EARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQA 120
            SR P+  P+ CS S +T    +  +K QL RR ++RNIAIVAHVDHGKTTLVD+ML+QA
Sbjct: 61  PSRRPLPRPITCSASPSTAEPASEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQA 120

Query: 121 KVFRDNQVVKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERIL 180
           KVFRDNQV++ERIMDSNDLERERGITILSKNTSITYK+TK+NIIDTPGHSDFGGEVER+L
Sbjct: 121 KVFRDNQVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVL 180

Query: 181 NMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFI 240
           NMV+G+LLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARP++V+NSTFELFI
Sbjct: 181 NMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPEFVVNSTFELFI 240

Query: 241 ELNASDEQCDFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLA 300
           ELNA+DEQCDFQ IYASGI+GKAGLSP+ L EDLGPLFE+IIRC+PGP I+KDGALQMLA
Sbjct: 241 ELNATDEQCDFQAIYASGIKGKAGLSPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQMLA 300

Query: 301 TNIEYDEHKGRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKVQ 360
           TNIEYDEHKGRIAIGRLHAG L+KGMDV+VCTSEDSCR+AR+SELFVYEKF RVP   V+
Sbjct: 301 TNIEYDEHKGRIAIGRLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSVE 360

Query: 361 AGDICAVCGVDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSR 420
           AGDICAVCG+D+IQIGETIADK +GKPLP IKVEEPTVKMSFS+NTSPF GREGKYVTSR
Sbjct: 361 AGDICAVCGIDNIQIGETIADKVHGKPLPTIKVEEPTVKMSFSVNTSPFSGREGKYVTSR 420

Query: 421 NLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVIT 480
           NLRDRL RELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPP+VI 
Sbjct: 421 NLRDRLNRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVIN 480

Query: 481 KRVNDQLVEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRGL 540
           KRVND+L+EPYEIATVEVPE HMG VVELLGKRRGQMFDM+GVGSEGTTFLRYKIPTRGL
Sbjct: 481 KRVNDKLLEPYEIATVEVPEAHMGPVVELLGKRRGQMFDMQGVGSEGTTFLRYKIPTRGL 540

Query: 541 LGLRNAILTASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQ 600
           LGLRNAILTASRGTAILNT+FDSYGPWAGDI TRD GSLVAFE+GT+TSYALAS+QERGQ
Sbjct: 541 LGLRNAILTASRGTAILNTVFDSYGPWAGDISTRDLGSLVAFEDGTSTSYALASAQERGQ 600

Query: 601 MFVSPGIDVYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIE 660
           MFV  G+DVYKGQIVGIHQRPGDL LN+CKKKAATN+RSNK+ TV+LDTPL YSLDDCIE
Sbjct: 601 MFVGSGVDVYKGQIVGIHQRPGDLGLNICKKKAATNIRSNKDVTVILDTPLTYSLDDCIE 660

Query: 661 YIQEDELVEVTPSSIRMCKNAKLTKKTR 680
           YI+EDELVEVTPSSIRMCKN K+ KK R
Sbjct: 661 YIEEDELVEVTPSSIRMCKNQKMAKKGR 674

[Close]

BLAST of CmoCh06G000440 vs. TAIR 10
Match: AT5G13650.2 (elongation factor family protein )

HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00
Identity = 551/689 (79.97%), Postives = 608/689 (88.24%), Query Frame = 0


Query: 1   MEMVMTFSSS------LSSSPLVYPKIKLGTVFTPQIKQLHGLTSSSRISTSLPKQALSS 60
           ME+ ++ SS+        +SPL++ +  LG  F   +K   G              AL  
Sbjct: 1   MELSLSTSSASPAVLRRQASPLLHKQQVLGVSFASALKPGGG--------------ALRF 60

Query: 61  RSRVPIRCPVKCSVSEAT----EARTEKSQLMRRQDIRNIAIVAHVDHGKTTLVDAMLKQ 120
            SR P+  P+ CS S +T        +K QL RR ++RNIAIVAHVDHGKTTLVD+ML+Q
Sbjct: 61  PSRRPLPRPITCSASPSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQ 120

Query: 121 AKVFRDNQVVKERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERI 180
           AKVFRDNQV++ERIMDSNDLERERGITILSKNTSITYK+TK+NIIDTPGHSDFGGEVER+
Sbjct: 121 AKVFRDNQVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERV 180

Query: 181 LNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELF 240
           LNMV+G+LLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARP++V+NSTFELF
Sbjct: 181 LNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPEFVVNSTFELF 240

Query: 241 IELNASDEQCDFQVIYASGIQGKAGLSPEKLGEDLGPLFESIIRCIPGPRIDKDGALQML 300
           IELNA+DEQCDFQ IYASGI+GKAGLSP+ L EDLGPLFE+IIRC+PGP I+KDGALQML
Sbjct: 241 IELNATDEQCDFQAIYASGIKGKAGLSPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQML 300

Query: 301 ATNIEYDEHKGRIAIGRLHAGELQKGMDVKVCTSEDSCRYARISELFVYEKFNRVPVGKV 360
           ATNIEYDEHKGRIAIGRLHAG L+KGMDV+VCTSEDSCR+AR+SELFVYEKF RVP   V
Sbjct: 301 ATNIEYDEHKGRIAIGRLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSV 360

Query: 361 QAGDICAVCGVDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTS 420
           +AGDICAVCG+D+IQIGETIADK +GKPLP IKVEEPTVKMSFS+NTSPF GREGKYVTS
Sbjct: 361 EAGDICAVCGIDNIQIGETIADKVHGKPLPTIKVEEPTVKMSFSVNTSPFSGREGKYVTS 420

Query: 421 RNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVI 480
           RNLRDRL RELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPP+VI
Sbjct: 421 RNLRDRLNRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVI 480

Query: 481 TKRVNDQLVEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTFLRYKIPTRG 540
            KRVND+L+EPYEIATVEVPE HMG VVELLGKRRGQMFDM+GVGSEGTTFLRYKIPTRG
Sbjct: 481 NKRVNDKLLEPYEIATVEVPEAHMGPVVELLGKRRGQMFDMQGVGSEGTTFLRYKIPTRG 540

Query: 541 LLGLRNAILTASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERG 600
           LLGLRNAILTASRGTAILNT+FDSYGPWAGDI TRD GSLVAFE+GT+TSYALAS+QERG
Sbjct: 541 LLGLRNAILTASRGTAILNTVFDSYGPWAGDISTRDLGSLVAFEDGTSTSYALASAQERG 600

Query: 601 QMFVSPGIDVYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCI 660
           QMFV  G+DVYKGQIVGIHQRPGDL LN+CKKKAATN+RSNK+ TV+LDTPL YSLDDCI
Sbjct: 601 QMFVGSGVDVYKGQIVGIHQRPGDLGLNICKKKAATNIRSNKDVTVILDTPLTYSLDDCI 660

Query: 661 EYIQEDELVEVTPSSIRMCKNAKLTKKTR 680
           EYI+EDELVEVTPSSIRMCKN K+ KK R
Sbjct: 661 EYIEEDELVEVTPSSIRMCKNQKMAKKGR 675

[Close]

BLAST of CmoCh06G000440 vs. TAIR 10
Match: AT2G31060.2 (elongation factor family protein )

HSP 1 Score: 461.8 bits (1187), Expect = 9.2e-130
Identity = 250/597 (41.88%), Postives = 371/597 (62.14%), Query Frame = 0


Query: 87  IRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVVKERIMDSNDLERERGITILSKNTSIT 146
           +RN+A++AHVDHGKTTL+D +L+Q        +  ER MDS +LERERGITI SK TSI 
Sbjct: 59  LRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSINLERERGITISSKVTSIF 118

Query: 147 YKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVV 206
           +KD ++N++DTPGH+DFGGEVER++ MVEG +LVVD+ EGP+ QT+FVL KAL++G   +
Sbjct: 119 WKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPI 178

Query: 207 VVVNKIDRPSA---RPDYVINSTFELFIELNASDEQCDFQVIYASGIQGKAGLS----PE 266
           +++NK+DRPS    R D V +  F+LF    A++EQ DF V+YAS  +G A  +    P 
Sbjct: 179 LLLNKVDRPSVTEERCDEVESLVFDLFANCGATEEQLDFPVLYASAKEGWASSTYTKDPP 238

Query: 267 KLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIGRLHAGELQKGMDV 326
              +++  L ++++R +  P+ + D    ML + +E D + GRI  GR+ +G ++ G  V
Sbjct: 239 VDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTGRVTSGVVRVGDRV 298

Query: 327 ----KVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCGVDDIQIGETIADKQY 386
               K  +  +    A++ +L   +    V +    AGDI  + G+    IG T+A  + 
Sbjct: 299 NGLRKTDSGSEKIEEAKVVKLMKKKGTTIVSIDAAGAGDIICMAGLTAPSIGHTVASAEV 358

Query: 387 GKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETA 446
              LP ++++ PT+ M+F +N SP  G++G ++T   + DRL  E E NLA+ V  G  +
Sbjct: 359 TTALPTVELDPPTISMTFGVNDSPLAGQDGTHLTGGRIGDRLMAEAETNLAINVIPG-LS 418

Query: 447 DTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVEPYEIATVEVPEEHMG 506
           +++ V GRG L + ILIENMRREG+E  V PP+V+ K    Q +EP E  T+E+ +EH+G
Sbjct: 419 ESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTEKGQKLEPIEEVTIEINDEHVG 478

Query: 507 AVVELLGKRRGQMFDMEGV-GSEGTTFLRYKIPTRGLLGLRNAILTASRGTAILNTIFDS 566
            V+E L  RR ++ DM  V G+EG T L    P+RGL+G R    + +RGT  ++  F +
Sbjct: 479 LVMEALSHRRAEVIDMGPVPGNEGRTRLSLTCPSRGLVGYRCVFSSDTRGTGFMHRAFLT 538

Query: 567 YGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDVYKGQIVGIHQRPGD 626
           Y  + G +    +G LV+   GT T+++L S + RG +FVSPG+D Y G I+G H R  D
Sbjct: 539 YEKYRGPLGNVRKGVLVSMARGTITAHSLMSLEARGILFVSPGLDSYDGMIIGEHSRETD 598

Query: 627 LSLNVCKKKAATNVRS-NKEQTVVLDTPLDYSLDDCIEYIQEDELVEVTPSSIRMCK 671
           L LN  K K  TN+RS  K++ V L  P   +L++ I Y+  DEL+EVTP +IR+ K
Sbjct: 599 LDLNPVKAKELTNIRSAGKDENVKLSPPRLMTLEEAIGYVASDELIEVTPKTIRLRK 650

[Close]

BLAST of CmoCh06G000440 vs. TAIR 10
Match: AT2G31060.3 (elongation factor family protein )

HSP 1 Score: 456.1 bits (1172), Expect = 5.1e-128
Identity = 250/601 (41.60%), Postives = 371/601 (61.73%), Query Frame = 0


Query: 87  IRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQVVKERIMDSNDLERERGITILSK----N 146
           +RN+A++AHVDHGKTTL+D +L+Q        +  ER MDS +LERERGITI SK     
Sbjct: 59  LRNVAVIAHVDHGKTTLMDRLLRQCGA----DIPHERAMDSINLERERGITISSKVSPFV 118

Query: 147 TSITYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFG 206
           TSI +KD ++N++DTPGH+DFGGEVER++ MVEG +LVVD+ EGP+ QT+FVL KAL++G
Sbjct: 119 TSIFWKDNELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYG 178

Query: 207 HAVVVVVNKIDRPSA---RPDYVINSTFELFIELNASDEQCDFQVIYASGIQGKAGLS-- 266
              ++++NK+DRPS    R D V +  F+LF    A++EQ DF V+YAS  +G A  +  
Sbjct: 179 LRPILLLNKVDRPSVTEERCDEVESLVFDLFANCGATEEQLDFPVLYASAKEGWASSTYT 238

Query: 267 --PEKLGEDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIGRLHAGELQK 326
             P    +++  L ++++R +  P+ + D    ML + +E D + GRI  GR+ +G ++ 
Sbjct: 239 KDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTGRVTSGVVRV 298

Query: 327 GMDV----KVCTSEDSCRYARISELFVYEKFNRVPVGKVQAGDICAVCGVDDIQIGETIA 386
           G  V    K  +  +    A++ +L   +    V +    AGDI  + G+    IG T+A
Sbjct: 299 GDRVNGLRKTDSGSEKIEEAKVVKLMKKKGTTIVSIDAAGAGDIICMAGLTAPSIGHTVA 358

Query: 387 DKQYGKPLPAIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVED 446
             +    LP ++++ PT+ M+F +N SP  G++G ++T   + DRL  E E NLA+ V  
Sbjct: 359 SAEVTTALPTVELDPPTISMTFGVNDSPLAGQDGTHLTGGRIGDRLMAEAETNLAINVIP 418

Query: 447 GETADTFIVSGRGTLHITILIENMRREGYEFMVGPPRVITKRVNDQLVEPYEIATVEVPE 506
           G  ++++ V GRG L + ILIENMRREG+E  V PP+V+ K    Q +EP E  T+E+ +
Sbjct: 419 G-LSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTEKGQKLEPIEEVTIEIND 478

Query: 507 EHMGAVVELLGKRRGQMFDMEGV-GSEGTTFLRYKIPTRGLLGLRNAILTASRGTAILNT 566
           EH+G V+E L  RR ++ DM  V G+EG T L    P+RGL+G R    + +RGT  ++ 
Sbjct: 479 EHVGLVMEALSHRRAEVIDMGPVPGNEGRTRLSLTCPSRGLVGYRCVFSSDTRGTGFMHR 538

Query: 567 IFDSYGPWAGDIHTRDQGSLVAFEEGTTTSYALASSQERGQMFVSPGIDVYKGQIVGIHQ 626
            F +Y  + G +    +G LV+   GT T+++L S + RG +FVSPG+D Y G I+G H 
Sbjct: 539 AFLTYEKYRGPLGNVRKGVLVSMARGTITAHSLMSLEARGILFVSPGLDSYDGMIIGEHS 598

Query: 627 RPGDLSLNVCKKKAATNVRS-NKEQTVVLDTPLDYSLDDCIEYIQEDELVEVTPSSIRMC 671
           R  DL LN  K K  TN+RS  K++ V L  P   +L++ I Y+  DEL+EVTP +IR+ 
Sbjct: 599 RETDLDLNPVKAKELTNIRSAGKDENVKLSPPRLMTLEEAIGYVASDELIEVTPKTIRLR 654

[Close]

BLAST of CmoCh06G000440 vs. TAIR 10
Match: AT2G31060.1 (elongation factor family protein )

HSP 1 Score: 359.4 bits (921), Expect = 6.4e-99
Identity = 199/511 (38.94%), Postives = 303/511 (59.30%), Query Frame = 0


Query: 173 MVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSA---RPDYVINSTFEL 232
           MVEG +LVVD+ EGP+ QT+FVL KAL++G   ++++NK+DRPS    R D V +  F+L
Sbjct: 1   MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPSVTEERCDEVESLVFDL 60

Query: 233 FIELNASDEQCDFQVIYASGIQGKAGLS----PEKLGEDLGPLFESIIRCIPGPRIDKDG 292
           F    A++EQ DF V+YAS  +G A  +    P    +++  L ++++R +  P+ + D 
Sbjct: 61  FANCGATEEQLDFPVLYASAKEGWASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDE 120

Query: 293 ALQMLATNIEYDEHKGRIAIGRLHAGELQKGMDV----KVCTSEDSCRYARISELFVYEK 352
              ML + +E D + GRI  GR+ +G ++ G  V    K  +  +    A++ +L   + 
Sbjct: 121 PFLMLVSMMEKDFYLGRILTGRVTSGVVRVGDRVNGLRKTDSGSEKIEEAKVVKLMKKKG 180

Query: 353 FNRVPVGKVQAGDICAVCGVDDIQIGETIADKQYGKPLPAIKVEEPTVKMSFSINTSPFV 412
              V +    AGDI  + G+    IG T+A  +    LP ++++ PT+ M+F +N SP  
Sbjct: 181 TTIVSIDAAGAGDIICMAGLTAPSIGHTVASAEVTTALPTVELDPPTISMTFGVNDSPLA 240

Query: 413 GREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYE 472
           G++G ++T   + DRL  E E NLA+ V  G  ++++ V GRG L + ILIENMRREG+E
Sbjct: 241 GQDGTHLTGGRIGDRLMAEAETNLAINVIPG-LSESYEVQGRGELQLGILIENMRREGFE 300

Query: 473 FMVGPPRVITKRVNDQLVEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGV-GSEGTT 532
             V PP+V+ K    Q +EP E  T+E+ +EH+G V+E L  RR ++ DM  V G+EG T
Sbjct: 301 LSVSPPKVMYKTEKGQKLEPIEEVTIEINDEHVGLVMEALSHRRAEVIDMGPVPGNEGRT 360

Query: 533 FLRYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDIHTRDQGSLVAFEEGTTTS 592
            L    P+RGL+G R    + +RGT  ++  F +Y  + G +    +G LV+   GT T+
Sbjct: 361 RLSLTCPSRGLVGYRCVFSSDTRGTGFMHRAFLTYEKYRGPLGNVRKGVLVSMARGTITA 420

Query: 593 YALASSQERGQMFVSPGIDVYKGQIVGIHQRPGDLSLNVCKKKAATNVRS-NKEQTVVLD 652
           ++L S + RG +FVSPG+D Y G I+G H R  DL LN  K K  TN+RS  K++ V L 
Sbjct: 421 HSLMSLEARGILFVSPGLDSYDGMIIGEHSRETDLDLNPVKAKELTNIRSAGKDENVKLS 480

Query: 653 TPLDYSLDDCIEYIQEDELVEVTPSSIRMCK 671
            P   +L++ I Y+  DEL+EVTP +IR+ K
Sbjct: 481 PPRLMTLEEAIGYVASDELIEVTPKTIRLRK 510

The following BLAST results are available for this feature:

BLAST of CmoCh06G000440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K410	0.0e+00	80.09	Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana...	[more]
P72749	1.4e-178	53.20	50S ribosomal subunit assembly factor BipA OS=Synechocystis sp. (strain PCC 6803...	[more]
O07631	1.5e-169	50.59	50S ribosomal subunit assembly factor BipA OS=Bacillus subtilis (strain 168) OX=...	[more]
H9L427	1.0e-165	47.74	50S ribosomal subunit assembly factor BipA OS=Salmonella typhimurium (strain LT2...	[more]
P0A3B2	5.0e-165	47.24	50S ribosomal subunit assembly factor BipA OS=Escherichia coli O127:H6 (strain E...	[more]

BLAST of CmoCh06G000440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHM0	0.0e+00	100.00	putative elongation factor TypA-like SVR3, chloroplastic OS=Cucurbita moschata O...	[more]
A0A6J1I1E0	0.0e+00	99.41	putative elongation factor TypA-like SVR3, chloroplastic OS=Cucurbita maxima OX=...	[more]
A0A6J1DDT1	0.0e+00	93.97	putative elongation factor TypA-like SVR3, chloroplastic OS=Momordica charantia ...	[more]
A0A5A7UJP9	0.0e+00	93.38	GTP-binding protein TypA/BipA-like protein OS=Cucumis melo var. makuwa OX=119469...	[more]
E5GBY4	0.0e+00	93.38	GTP-binding protein type a OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of CmoCh06G000440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13650.1	0.0e+00	80.09	elongation factor family protein	[more]
AT5G13650.2	0.0e+00	79.97	elongation factor family protein	[more]
AT2G31060.2	9.2e-130	41.88	elongation factor family protein	[more]
AT2G31060.3	5.1e-128	41.60	elongation factor family protein	[more]
AT2G31060.1	6.4e-99	38.94	elongation factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 671..679
None	No IPR available	GENE3D	3.30.70.870	Elongation Factor G (Translational Gtpase), domain 3	coord: 388..671 e-value: 9.0E-117 score: 391.0
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 281..381 e-value: 3.0E-29 score: 102.8
None	No IPR available	GENE3D	3.30.70.240		coord: 471..564 e-value: 9.0E-117 score: 391.0
None	No IPR available	PANTHER	PTHR42908	TRANSLATION ELONGATION FACTOR-RELATED	coord: 45..679
None	No IPR available	PANTHER	PTHR42908:SF31	BNAC09G43450D PROTEIN	coord: 45..679
None	No IPR available	CDD	cd03691	BipA_TypA_II	coord: 287..380 e-value: 3.50556E-36 score: 129.23
None	No IPR available	CDD	cd16263	BipA_III	coord: 387..465 e-value: 4.90962E-46 score: 155.931
None	No IPR available	CDD	cd01891	TypA_BipA	coord: 86..279 e-value: 2.27037E-133 score: 388.49
IPR000795	Translational (tr)-type GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 133..141 score: 62.23 coord: 153..163 score: 64.38 coord: 89..102 score: 62.66 coord: 205..214 score: 45.88
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 86..277 e-value: 3.9E-52 score: 176.6
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 85..280 score: 51.691452
IPR000640	Elongation factor EFG, domain V-like	SMART	SM00838	EFG_C_a	coord: 477..566 e-value: 1.2E-4 score: 26.1
IPR000640	Elongation factor EFG, domain V-like	PFAM	PF00679	EFG_C	coord: 478..563 e-value: 8.9E-20 score: 70.5
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 87..216 e-value: 5.0E-21 score: 73.1
IPR006298	GTP-binding protein TypA	TIGRFAM	TIGR01394	TIGR01394	coord: 87..676 e-value: 1.2E-278 score: 923.2
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 301..370 e-value: 1.1E-9 score: 38.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 84..280 e-value: 1.7E-61 score: 209.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 76..287
IPR042116	GTP-binding protein TypA/BipA, C-terminal	GENE3D	2.40.50.250	bipa protein	coord: 565..676 e-value: 9.0E-117 score: 391.0
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 126..141
IPR035651	BipA, domain V	CDD	cd03710	BipA_TypA_C	coord: 480..559 e-value: 1.23531E-37 score: 132.629
IPR035647	EF-G domain III/V-like	SUPERFAMILY	54980	EF-G C-terminal domain-like	coord: 480..595
IPR035647	EF-G domain III/V-like	SUPERFAMILY	54980	EF-G C-terminal domain-like	coord: 385..469
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 234..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000440.1	CmoCh06G000440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity