Homology
BLAST of CmoCh06G000330 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 5.1e-67
Identity = 139/354 (39.27%), Postives = 213/354 (60.17%), Query Frame = 0
Query: 37 TAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL-- 96
T + +DR RD D +K+R + K L++ + +++ ++ +GL
Sbjct: 38 TTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLARRLGLGF 97
Query: 97 -RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKL 156
+ G F+ K+PHVF+++ HP++R L CR+T K ++ E + D + V RL+KL
Sbjct: 98 KQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 157
Query: 157 LMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHEN 216
+MMS G + + +R+ E GLP+ F S+++K+ FRL+D E +E+V+K N
Sbjct: 158 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 217
Query: 217 VAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEK 276
+++ +E+ RE E+R K + DV+F+F +NFP GFKI FR + WQRLPY PYE
Sbjct: 218 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYED 277
Query: 277 RQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH 336
G+ +RS +R EKR+VA +HELLSLTVEK + +ER+ HFR + ++E LL+H
Sbjct: 278 ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQH 337
Query: 337 PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK 380
GIFYIST+GN VFLRE Y +G LVEPN +Y+ RR++ +L+L+ R K
Sbjct: 338 QGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390
BLAST of CmoCh06G000330 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 1.7e-38
Identity = 122/382 (31.94%), Postives = 210/382 (54.97%), Query Frame = 0
Query: 35 AVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL 94
AV AQ ++ R +++ D + + +KL+++ KLR +++ +SL+ + R+R +GL
Sbjct: 54 AVVAQAAVK-RRKEIPFDNVIQRDKKLKLVLKLRNILVSNP-DRVMSLRDLGRFRRDLGL 113
Query: 95 --RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKK 154
+ + + ++P VF+V + +L R+T L E ++ N+SE V +L+K
Sbjct: 114 TRKRRLIALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRK 173
Query: 155 LLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEI---VELV--DKHE 214
LLMMS + + I + + +LGLP FR++I ++Y FR+V ++ +EL D
Sbjct: 174 LLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPEL 233
Query: 215 NVAVAEV--EQWREREFREK-WLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAK 274
V+ AEV E+ R RE +E+ + + +KF + P G K+ G ++ ++ +PY
Sbjct: 234 AVSAAEVAEEENRAREEQERNLIIDRPLKFN-RVKLPQGLKLSRGEARRVAQFKEMPYIS 293
Query: 275 PYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIREL 334
PY +RS G +EK A V+HE+LSLT+EK V+ L HFR +F ++R +
Sbjct: 294 PYSDFS--HLRS--GSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGM 353
Query: 335 LLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQLESS 394
L++HP +FY+S KG+ VFLREAY LVE + + +++ KM+ L+ + R + + ++
Sbjct: 354 LIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPAT 413
Query: 395 MEIKEHISAADNGDWLSKSEGS 407
E + NG SEGS
Sbjct: 414 SEEADR----TNGAAQMLSEGS 423
BLAST of CmoCh06G000330 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 3.8e-38
Identity = 111/353 (31.44%), Postives = 188/353 (53.26%), Query Frame = 0
Query: 33 KPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFV 92
+PA R ++ D + + +KL+++ KLR +++ + +SL+ + R+R +
Sbjct: 45 RPAAVVAQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILV-AQPDRVMSLRELGRFRRDL 104
Query: 93 GL--RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRL 152
GL + + + ++P VFDV + +L R+T L E + N+SE V +L
Sbjct: 105 GLTRKRRLIALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNESEGLAVAKL 164
Query: 153 KKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE---IVELVDKHE 212
+KLLMMS + I + + +LGLP FR+++ ++Y FR+V ++ +EL
Sbjct: 165 RKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDP 224
Query: 213 NVAVAEVEQWREREFREKWLSEFDVKFAFPINF-----PTGFKIKGGFREKLRNWQRLPY 272
+AV+ E E E R + E ++ P+ F P G K+ G ++ ++ +PY
Sbjct: 225 ELAVSAAE-LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPY 284
Query: 273 AKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIR 332
PY +RS G +EK A V+HE+LSLTVEK V+ L HFR +F ++R
Sbjct: 285 ISPYADFS--HLRS--GSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLR 344
Query: 333 ELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 376
++++HP +FY+S KG+ VFLREAY LVE N + +++ KM+ L+ + R
Sbjct: 345 GMIIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPR 390
BLAST of CmoCh06G000330 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 7.4e-34
Identity = 110/388 (28.35%), Postives = 194/388 (50.00%), Query Frame = 0
Query: 5 ESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRL--------EDRTRDLKLDKLAT 64
+S +ST +R +F ++G + + +TR+ R ++L D +
Sbjct: 30 KSGLPMSTIRAARSQFMGEGLILGNKYGFWSTSRKTRVVVEPVRAAVKRRKELTFDSVVQ 89
Query: 65 QIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL--RIGIGDFVHKYPHVFDVFPH 124
+ +KL+++ +R++++ + +SL+ + ++R +GL R + KYP VF++
Sbjct: 90 RDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIVEE 149
Query: 125 PLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKEL 184
+L ++T + L E + N+ E V +L+KL+MMS++ + + + + +L
Sbjct: 150 G-AYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDL 209
Query: 185 GLPDGFRESILVKYSDDFRLVDL---EIVELVDKHENVAVAEVE----QWREREFREKWL 244
GLP FR++I +Y FR+V +EL +AV+ E R RE E+ L
Sbjct: 210 GLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRTRESEERNL 269
Query: 245 SEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRA 304
+ P G + K+ ++ + Y PY + +RS G +EK A
Sbjct: 270 IIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY--KDFSHLRS--GTLEKEKHA 329
Query: 305 VAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLRE 364
V+HELLSLT EK V+ L HFR +F +R +L++HP +FY+S KG VFLRE
Sbjct: 330 CGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLRE 389
Query: 365 AYAKGCLVEPNPIYIVRRKMQDLLLLGR 376
AY L++ +P+ +V+ KM+ L+ + R
Sbjct: 390 AYRNSELIDKDPLTLVKEKMRALVSVPR 411
BLAST of CmoCh06G000330 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 3.4e-23
Identity = 96/343 (27.99%), Postives = 158/343 (46.06%), Query Frame = 0
Query: 47 RDLKLDKLATQIR--KLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHK 106
RD D + +R +L+ + L+ ++ I + R F + I F+ K
Sbjct: 33 RDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQF-DVSTKIAHFLRK 92
Query: 107 YPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHI 166
+P +F+ F P R+T + L +QE V S + RLKKL++MS + L +
Sbjct: 93 FPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPL 152
Query: 167 HALRLISKELGLPDGFRESILVKYSDDFRLVDLE--IVEL-VDKHENVAVAEVEQWRERE 226
++ + LGLPD + + + FR VD+E + L VD + V V Q +
Sbjct: 153 SIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMK 212
Query: 227 FREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMH 286
R +S +++ FP+ G +++ + L +Q+LPY PY+ S
Sbjct: 213 KRRGEVSLEEIE--FPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSS----D 272
Query: 287 RREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQ 346
EKR V LHELL L VE + ++L+ ++ F + + + +HP IFY+S K T
Sbjct: 273 IAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTC 332
Query: 347 IVFLREAYAKGCLVEPNPIYIVRRKM------QDLLLLGRRHT 379
LRE Y VE +P+ VR+K +L+L RR++
Sbjct: 333 TAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNS 368
BLAST of CmoCh06G000330 vs. ExPASy TrEMBL
Match:
A0A6J1FCB5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)
HSP 1 Score: 837.4 bits (2162), Expect = 2.6e-239
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 0
Query: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60
MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK
Sbjct: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60
Query: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL
Sbjct: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
Query: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180
CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180
Query: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
Query: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300
PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE
Sbjct: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300
Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360
KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360
Query: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 417
YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of CmoCh06G000330 vs. ExPASy TrEMBL
Match:
A0A6J1I6W3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470166 PE=4 SV=1)
HSP 1 Score: 822.8 bits (2124), Expect = 6.6e-235
Identity = 409/416 (98.32%), Postives = 411/416 (98.80%), Query Frame = 0
Query: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRK 60
MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDR RDLKLD LATQIRK
Sbjct: 1 MKLFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRK 60
Query: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL
Sbjct: 61 LRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL 120
Query: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGF 180
CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMS NGTLHIHALRLISKELGLPDGF
Sbjct: 121 CCRITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGF 180
Query: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF
Sbjct: 181 RESILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINF 240
Query: 241 PTGFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVE 300
PTG+KIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHR EKRAVAVLHELLSLTVE
Sbjct: 241 PTGYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVE 300
Query: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360
KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI
Sbjct: 301 KLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPI 360
Query: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 417
YIVRRKMQDLLLLGRRHTKQLESSMEIKEH+SAADNGD LSKSEGSWVLPILQGFD
Sbjct: 361 YIVRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416
BLAST of CmoCh06G000330 vs. ExPASy TrEMBL
Match:
A0A6J1FCD7 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)
HSP 1 Score: 809.3 bits (2089), Expect = 7.5e-231
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0
Query: 16 SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRK 75
SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRK
Sbjct: 7 SRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRK 66
Query: 76 RGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQE 135
RGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQE
Sbjct: 67 RGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQE 126
Query: 136 ENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLV 195
ENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLV
Sbjct: 127 ENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLV 186
Query: 196 DLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLR 255
DLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLR
Sbjct: 187 DLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLR 246
Query: 256 NWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF 315
NWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF
Sbjct: 247 NWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDF 306
Query: 316 AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 375
AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR
Sbjct: 307 AIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 366
Query: 376 RHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 417
RHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD
Sbjct: 367 RHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 407
BLAST of CmoCh06G000330 vs. ExPASy TrEMBL
Match:
A0A1S3B7J9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4 SV=1)
HSP 1 Score: 735.7 bits (1898), Expect = 1.1e-208
Identity = 361/413 (87.41%), Postives = 386/413 (93.46%), Query Frame = 0
Query: 4 FESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRI 63
FES F LS FSR+ FGPFNHFCQ+RW KP V+AQTRLE RTRDLKLDKLATQ++K R+
Sbjct: 7 FESPFFLSKPTFSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRV 66
Query: 64 IFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCR 123
I KL ELM +RKRGPFVSLQIMSRWRN VG+RIGIG+F+HKYPHVFDVFPHP+RRNLCCR
Sbjct: 67 ILKLHELMTNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCR 126
Query: 124 ITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRES 183
ITGKM ALMKQEENVIND EIETVQRLKKLLMMSVNGTLH+HALRLIS+ELGLPDGFRES
Sbjct: 127 ITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRES 186
Query: 184 ILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTG 243
IL KYSDDFRLVDLEIVELV+KHE+ AVAEVE+WREREFREKWLSEFDVK+AFPINFPTG
Sbjct: 187 ILEKYSDDFRLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTG 246
Query: 244 FKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLV 303
F I+GGFREKLRNWQRLPY +PYEKRQ FG RS GG+ R EKRAVAVLHELLSLTVEKLV
Sbjct: 247 FIIEGGFREKLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLV 306
Query: 304 DVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIV 363
DV+RLVHFRRDFAIEVNIRELLLKHPG+FYISTKG TQIVFLREAYAKGCLVEPNPIYIV
Sbjct: 307 DVDRLVHFRRDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIV 366
Query: 364 RRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 417
RRKMQDL+LLGRRHTKQLESSMEIKE+ +AADNGDWLSKSEGSWVLPILQGFD
Sbjct: 367 RRKMQDLVLLGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419
BLAST of CmoCh06G000330 vs. ExPASy TrEMBL
Match:
A0A0A0LFE1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 SV=1)
HSP 1 Score: 734.9 bits (1896), Expect = 1.8e-208
Identity = 360/414 (86.96%), Postives = 386/414 (93.24%), Query Frame = 0
Query: 3 LFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLR 62
LFES LS FSR+ FGPFNHFCQ+RW KP V AQTRLEDRTRDLKLDKLATQ++K R
Sbjct: 6 LFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFR 65
Query: 63 IIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCC 122
+I KL ELM +RKRGPFVSLQIMSRWRN VG+RIGIG+F+HKYPH+FD+FPHP+RRNLCC
Sbjct: 66 VILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCC 125
Query: 123 RITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRE 182
RITGKM ALMKQEENVIND EIETVQRLKKLLMMSVNGTLH+HALRLIS+ELGLPDGFRE
Sbjct: 126 RITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRE 185
Query: 183 SILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPT 242
SIL KYSDDFRLVDLEIVELV+KH+N A+AEVE+WREREFREKWLSEFDVK+AFPINFPT
Sbjct: 186 SILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPT 245
Query: 243 GFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKL 302
GF I+GGFREKLRNWQRLPY +PYEKRQGFG RS GG+ R EKRAVAVLHELLSLTVEKL
Sbjct: 246 GFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKL 305
Query: 303 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYI 362
VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKG TQIVFLREAYAKGCLVEPNPIYI
Sbjct: 306 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYI 365
Query: 363 VRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 417
VRRKMQDL+LLGRRHTKQLESSMEIKE+ +A +NGDWLSKSEGSWVLPILQGFD
Sbjct: 366 VRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 419
BLAST of CmoCh06G000330 vs. TAIR 10
Match:
AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 486.1 bits (1250), Expect = 2.8e-137
Identity = 235/398 (59.05%), Postives = 309/398 (77.64%), Query Frame = 0
Query: 22 PFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVS 81
P + QRRW KP +AQTRLE+RTRD +LDK+ QIRKL II ++ +LM +KRGPFVS
Sbjct: 45 PLYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVS 104
Query: 82 LQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVIND 141
LQ+MSRW+N VGL + +G F+ KYPH F++F HP +NLCC+IT K L+ +EENV+ +
Sbjct: 105 LQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRE 164
Query: 142 SEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLEIVE 201
E++ V+R+KKLL++S +G L +HALRLI KELGLP+ FR+SIL KYS +FRLVDLE +E
Sbjct: 165 CEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLETLE 224
Query: 202 LVDK-HENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRL 261
LVD+ E++ VA+VE+WRE E+REKWLS+F+ +AFPI+ PTGFKI+ GFRE+L+NWQR+
Sbjct: 225 LVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRV 284
Query: 262 PYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN 321
PY KPY++++ G+ R EKR VAV+HELLSLTVEK+V+VERL HFR+D IEVN
Sbjct: 285 PYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVN 344
Query: 322 IRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTKQ 381
+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DL+LL R+++
Sbjct: 345 VREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRM 404
Query: 382 L-----ESSMEIKEH-ISAADNGDWLSKSEGSWVLPIL 413
L E+ E K + + N DW +G WVLPIL
Sbjct: 405 LLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 437
BLAST of CmoCh06G000330 vs. TAIR 10
Match:
AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 416.8 bits (1070), Expect = 2.1e-116
Identity = 198/341 (58.06%), Postives = 265/341 (77.71%), Query Frame = 0
Query: 79 FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENV 138
F + ++MSRW+N VGL + +G F+ KYPH F++F HP +NLCC+IT K L+ +EENV
Sbjct: 17 FSTNKLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENV 76
Query: 139 INDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE 198
+ + E++ V+R+KKLL++S +G L +HALRLI KELGLP+ FR+SIL KYS +FRLVDLE
Sbjct: 77 VRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE 136
Query: 199 IVELVDK-HENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNW 258
+ELVD+ E++ VA+VE+WRE E+REKWLS+F+ +AFPI+ PTGFKI+ GFRE+L+NW
Sbjct: 137 TLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNW 196
Query: 259 QRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAI 318
QR+PY KPY++++ G+ R EKR VAV+HELLSLTVEK+V+VERL HFR+D I
Sbjct: 197 QRVPYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 256
Query: 319 EVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRH 378
EVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DL+LL R+
Sbjct: 257 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRY 316
Query: 379 TKQL-----ESSMEIKEH-ISAADNGDWLSKSEGSWVLPIL 413
++ L E+ E K + + N DW +G WVLPIL
Sbjct: 317 SRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 352
BLAST of CmoCh06G000330 vs. TAIR 10
Match:
AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 256.5 bits (654), Expect = 3.6e-68
Identity = 139/354 (39.27%), Postives = 213/354 (60.17%), Query Frame = 0
Query: 37 TAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRGPFVSLQIMSRWRNFVGL-- 96
T + +DR RD D +K+R + K L++ + +++ ++ +GL
Sbjct: 38 TTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT-IAISLLDTLARRLGLGF 97
Query: 97 -RIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRLKKL 156
+ G F+ K+PHVF+++ HP++R L CR+T K ++ E + D + V RL+KL
Sbjct: 98 KQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 157
Query: 157 LMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVDLE-----IVELVDKHEN 216
+MMS G + + +R+ E GLP+ F S+++K+ FRL+D E +E+V+K N
Sbjct: 158 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 217
Query: 217 VAVAEVEQWREREFREKWLSEFDVKFAFPINFPTGFKIKGGFREKLRNWQRLPYAKPYEK 276
+++ +E+ RE E+R K + DV+F+F +NFP GFKI FR + WQRLPY PYE
Sbjct: 218 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYED 277
Query: 277 RQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKH 336
G+ +RS +R EKR+VA +HELLSLTVEK + +ER+ HFR + ++E LL+H
Sbjct: 278 ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQH 337
Query: 337 PGIFYISTKGN---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGRRHTK 380
GIFYIST+GN VFLRE Y +G LVEPN +Y+ RR++ +L+L+ R K
Sbjct: 338 QGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390
BLAST of CmoCh06G000330 vs. TAIR 10
Match:
AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 238.8 bits (608), Expect = 7.8e-63
Identity = 136/354 (38.42%), Postives = 210/354 (59.32%), Query Frame = 0
Query: 33 KPAVTAQTRLEDRTRDLKLDKLATQIRKLRIIFKLRELMIDRKRG--PFVSLQIMSRWRN 92
+ T+ + R+RD +KL + + L + +++L + P +S++ +SR
Sbjct: 22 RSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQ 81
Query: 93 FVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCCRITGKMAALMKQEENVINDSEIETVQRL 152
+ L G F+ KYPH+F V P++ CR+T + +QE I + V RL
Sbjct: 82 KLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRL 141
Query: 153 KKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDDFRLVD-----LEIVELVDK 212
+LL MS++ ++ + A+ + +ELGLPD F +S++ K F+L D I+ELV +
Sbjct: 142 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 201
Query: 213 HEN--VAVAEVEQWREREFREKWLS--EFDVKFAFPINFPTGFKIKGGFREKLRNWQRLP 272
E A VE+WR E ++ S +++F+F ++P G ++ F+ K++ WQRLP
Sbjct: 202 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 261
Query: 273 YAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNI 332
Y PYE G +S G+ EKRAVA+ HE L+LTVEK+V+VE++ HFR+ F I++NI
Sbjct: 262 YVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 321
Query: 333 RELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLLLLGR 376
R+L L HPG+FY+STKG VFLREAY +G L++PNP+Y RRK+ DL+LLGR
Sbjct: 322 RDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGR 374
BLAST of CmoCh06G000330 vs. TAIR 10
Match:
AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 157.5 bits (397), Expect = 2.3e-38
Identity = 102/317 (32.18%), Postives = 164/317 (51.74%), Query Frame = 0
Query: 75 KRGP--FVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNL-CCRITGKMAAL 134
KR P F++ + ++ W+ +GL + + F+ +YP +F FPH +L C ++T L
Sbjct: 62 KRSPTGFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALML 121
Query: 135 MKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRESILVKYSDD 194
QEE + E +TV+RL ++LMM + T+ + +L + +LGLPD + +++++KY D
Sbjct: 122 DSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDH 181
Query: 195 FRLVDLE----IVELVDKHENVAVAEVEQWRE------REFREKWLSEFDVKFAFPINFP 254
F V ++LV + A + +++ E E R + FP++FP
Sbjct: 182 FCFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFP 241
Query: 255 TGFKIKGGFREKLRNW----QRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSL 314
G+ G ++K++ W Q+LPY PY+ S EKRAVAVLHELLSL
Sbjct: 242 RGY----GAQKKVKAWMDEFQKLPYISPYDDPSNIDPES----DLMEKRAVAVLHELLSL 301
Query: 315 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEP 374
T+ K L R + I L ++PGIFY+S K T V L+E Y +G LV+P
Sbjct: 302 TIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDP 361
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q689D6 | 5.1e-67 | 39.27 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
| Q65XL5 | 1.7e-38 | 31.94 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
| B6TTV8 | 3.8e-38 | 31.44 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
| A0MFS5 | 7.4e-34 | 28.35 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
| Q9ZUZ6 | 3.4e-23 | 27.99 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1FCB5 | 2.6e-239 | 100.00 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... | [more] |
| A0A6J1I6W3 | 6.6e-235 | 98.32 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
| A0A6J1FCD7 | 7.5e-231 | 100.00 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=... | [more] |
| A0A1S3B7J9 | 1.1e-208 | 87.41 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4... | [more] |
| A0A0A0LFE1 | 1.8e-208 | 86.96 | PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 S... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G45790.2 | 2.8e-137 | 59.05 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
| AT5G45790.1 | 2.1e-116 | 58.06 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
| AT4G33495.1 | 3.6e-68 | 39.27 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
| AT1G06440.1 | 7.8e-63 | 38.42 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
| AT3G58520.1 | 2.3e-38 | 32.18 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
