CmoCh06G000290 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	R3h domain containing protein, putative
Location	Cmo_Chr06: 194802 .. 197765 (-)
RNA-Seq Expression	CmoCh06G000290
Synteny	CmoCh06G000290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCCCATCTGCTCGGTGGGATACGAAAGAGGGTTTCTTTTCCTCTCTCTCTCTCTCAATCTTCCTCCTCCTCCTCTGATGCTAAGGATTAAACCCTTTTCCTCTTCCTTCCCTCTTCCCTTTCTTCTTCTTCTTCTTCTCTGACCCAGAAGGGGAAGAAGAAACGCCTCTAAAAATCCCAGCAGTTTCAGAGTCCTGTGCGTTTAATACTACAGAGACCTCTCCTCTTCCATGGACACAGCTTCCTTTGATGTCGCCCCACAAGGGTTCAACGGCATAGACTCAATGGTCGACCCCTTCTTGGTGGAGGCTCTCCAGAATCCTCGACATCGTCTCACCAGTGAGTTCTTTTTTTTTTTTTTTCCCCTTTTAATAGAAGGGGTTGAATTCCCAATTCCCCTTTGTTGTTTCCCCCAATCTTGAATCTGTTTCTGGGATCAATTCATTGCAATTTTCGAGTTTTCTTGCTGTCCGATTTGTGTTCTTGTTGTTTGAAATCTGGTGAATGATTTCATTTCATTTGATTTTGTTGTTCTGTAAGCTTGTAGTTGGGTAAGATCTGTTCTTTCTTCGTGAGGTTTCTGCAAGTGCCAATTGTATATTGAACAACAGAACAAGCGTACAAAAGTAACAACTGATCAAAAATTCATATCTTTTTGAATTTAATAATAGAAATGCATCTTTTTCTTATAGGAAACAAAATGATTTCATTTGTATTTAGTTTCTCAACGGCAAAGATCCAAAGGAACACTTCCATTTTGTTCATTCTTACAGATAATGTAAGGTAGCATTGCGTAAATGGATATTGAGCAAACAAGTTATTTTTAGAGGCCTCAAGTTGTCACTTTTTTATTGTCTTTTGGAATTGGTATGTCTTATCTTCAGCTAAGCGCATAGGGTAGTTCATAATAGGCAGGGATTTCCCTGTTGATGTTCAATCTTCCTTCCCAAGTCCCATTGATATAAATGTGCATTTCTCGTATTTCTTCATTTGAACATTGAATTCTTTTAATAAAATGTGATTTTTCTTAGTAATTTACAATTTCCTTTCAGTTTTACGAATGGAGCTTGATATCCAGAAGTTTCTGCATAATCCGGATCAGCAGCATTTTGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCACCGTGTTGCTCAACACTATGGCCTTCAAACCATGGTTCAGGACTCTGGTGTAGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACAGCGGAAAGCAGACTCCCTTCTGTGCATTTATCTGAAATACCTGCAAAGCAATTGGACAATGAGAAACATGAGCAGGTCAAAATTGTTATCAGACCCAGGCCTAACAAAATGTCTGAAATTTCTGCCAATGATGGAGGTCTCAAACAAAGTTCTGTCAGGAGCGTGGAAGAGAGAAAGGAGGAATATGATAGGGCACGAGCTCGAATCTTCAGCTCCCCAAGTAGCCCTGAATTAGATGATACAACATCTCAGGCCCCATCTGAAGGAAAGTACGTTTGCTCGAACAGGGATGAGACTGAAGGCTGTAGAACTTTGGGTATTGATTTGGAAAAATTTAATGGCAGGGATGCCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGCGACCCTGATTATGATCGCAATTACGATAGGTATGTGTCCATGAAAATTTAGTCCGACGTTTTTGTTATGCCAATGGAGACATTTTCTTTGATTCTTTTTTGATACAGGTATATTAGGAACCTTCCAATCAATCAAAACTTTAGCTTGGCGCCCTTTGTTATGCCTAAAATTCAGCCTCCATTTGTGCAATACGATTCGGGTTATTCTCTCATGGGTCATATACCTGGAACTCAAGCTTCAGTTAGCTATGGGCCTCATCCGAGTCCTGCTGTAAGCCCTTTCTGCACAGTGGGTTTAAACCAAACATCTAGAGATGCATCTTATGAACAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCGTACAACCAGCTCAGGCATTCTGCTTTTCAGGTACTATTTAATAACGAGGCTTTTCCCATTGCAAAAAGGTTGCAAGTATTGTTTTCCAAAACCCCCCAAGAGAACGGTATCATATTTGTCTCTAATATCTTTGTTTGGAGGCCCCCAACTCCAGCCAAAGGAACTCCTTTGAGCTTCCCTTATCAGTATCTGAAGTTTGGATTGTCATAAACATATTGGGTAGGATCGAATCCCCAGGGTCAGGTGTAGACCATGTGTTTACTCCTCACATCGGATGGAGAGGGGAACAAAACATTCCCAATAAGAGTACAATATCGGTTAGTGGTGGGCTTCGACGCTGGGCCCCAAAGGGGCGTAGATTGTGAGATCCCACGTCGGTTGGAGAGAGGAACAAAACATTCATTTTAAGTGTGTGGAAACCTCTTTCTAATAGATGCGTTTTAAAACTAAACTTTGAGGGGAAGCCCAGAAGGGAAAGCCCAAAGAGTTGAGCTGTAATAGTAGGAGGATGATTATCCGGTAAGTGCAGTATCATTTATATACAACTCTTGACATTCATGAACTGATTACTATGTTGTGGTGGTATGTTAATGCAGGCCCCATTCATCCAGCAACCCCTCAGCTTTGACTATTCACAAAACCATTAGACAATGAGGAGTTTAGGTGAAAAAAAAAAAACAGTTTACAACTAGATTTTGTACCTGTAGGGGTTGCCTTTTACTCTGCTTTGACTGCTTGGAACTCAGTTCTAGTTTGTGCCTCTTTTGTTCTTCATTTGGAGCTTTATTCTAAGAATCTGTAAGGATTGAGGAGTTTCTGATATCATTCCATTAGCTGAATTTCTTCATCTCATACTTTTGCTTGTATTGCTGCATTCAATCTCTCTTTAATACCATTTCAACCATTGGACTTCAATTCTTCTCCTCTGCTACACACGTATGTGTCAACTCATGTGCA

mRNA sequence

CCCCCCCATCTGCTCGGTGGGATACGAAAGAGGGTTTCTTTTCCTCTCTCTCTCTCTCAATCTTCCTCCTCCTCCTCTGATGCTAAGGATTAAACCCTTTTCCTCTTCCTTCCCTCTTCCCTTTCTTCTTCTTCTTCTTCTCTGACCCAGAAGGGGAAGAAGAAACGCCTCTAAAAATCCCAGCAGTTTCAGAGTCCTGTGCGTTTAATACTACAGAGACCTCTCCTCTTCCATGGACACAGCTTCCTTTGATGTCGCCCCACAAGGGTTCAACGGCATAGACTCAATGGTCGACCCCTTCTTGGTGGAGGCTCTCCAGAATCCTCGACATCGTCTCACCATTTTACGAATGGAGCTTGATATCCAGAAGTTTCTGCATAATCCGGATCAGCAGCATTTTGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCACCGTGTTGCTCAACACTATGGCCTTCAAACCATGGTTCAGGACTCTGGTGTAGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACAGCGGAAAGCAGACTCCCTTCTGTGCATTTATCTGAAATACCTGCAAAGCAATTGGACAATGAGAAACATGAGCAGGTCAAAATTGTTATCAGACCCAGGCCTAACAAAATGTCTGAAATTTCTGCCAATGATGGAGGTCTCAAACAAAGTTCTGTCAGGAGCGTGGAAGAGAGAAAGGAGGAATATGATAGGGCACGAGCTCGAATCTTCAGCTCCCCAAGTAGCCCTGAATTAGATGATACAACATCTCAGGCCCCATCTGAAGGAAAGTACGTTTGCTCGAACAGGGATGAGACTGAAGGCTGTAGAACTTTGGGTATTGATTTGGAAAAATTTAATGGCAGGGATGCCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGCGACCCTGATTATGATCGCAATTACGATAGGTATATTAGGAACCTTCCAATCAATCAAAACTTTAGCTTGGCGCCCTTTGTTATGCCTAAAATTCAGCCTCCATTTGTGCAATACGATTCGGGTTATTCTCTCATGGGTCATATACCTGGAACTCAAGCTTCAGTTAGCTATGGGCCTCATCCGAGTCCTGCTGTAAGCCCTTTCTGCACAGTGGGTTTAAACCAAACATCTAGAGATGCATCTTATGAACAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCGTACAACCAGCTCAGGCATTCTGCTTTTCAGGTACTATTTAATAACGAGGCTTTTCCCATTGCAAAAAGGTTGCAAGCCCCATTCATCCAGCAACCCCTCAGCTTTGACTATTCACAAAACCATTAGACAATGAGGAGTTTAGGTGAAAAAAAAAAAACAGTTTACAACTAGATTTTGTACCTGTAGGGGTTGCCTTTTACTCTGCTTTGACTGCTTGGAACTCAGTTCTAGTTTGTGCCTCTTTTGTTCTTCATTTGGAGCTTTATTCTAAGAATCTGTAAGGATTGAGGAGTTTCTGATATCATTCCATTAGCTGAATTTCTTCATCTCATACTTTTGCTTGTATTGCTGCATTCAATCTCTCTTTAATACCATTTCAACCATTGGACTTCAATTCTTCTCCTCTGCTACACACGTATGTGTCAACTCATGTGCA

Coding sequence (CDS)

ATGGACACAGCTTCCTTTGATGTCGCCCCACAAGGGTTCAACGGCATAGACTCAATGGTCGACCCCTTCTTGGTGGAGGCTCTCCAGAATCCTCGACATCGTCTCACCATTTTACGAATGGAGCTTGATATCCAGAAGTTTCTGCATAATCCGGATCAGCAGCATTTTGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCACCGTGTTGCTCAACACTATGGCCTTCAAACCATGGTTCAGGACTCTGGTGTAGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACAGCGGAAAGCAGACTCCCTTCTGTGCATTTATCTGAAATACCTGCAAAGCAATTGGACAATGAGAAACATGAGCAGGTCAAAATTGTTATCAGACCCAGGCCTAACAAAATGTCTGAAATTTCTGCCAATGATGGAGGTCTCAAACAAAGTTCTGTCAGGAGCGTGGAAGAGAGAAAGGAGGAATATGATAGGGCACGAGCTCGAATCTTCAGCTCCCCAAGTAGCCCTGAATTAGATGATACAACATCTCAGGCCCCATCTGAAGGAAAGTACGTTTGCTCGAACAGGGATGAGACTGAAGGCTGTAGAACTTTGGGTATTGATTTGGAAAAATTTAATGGCAGGGATGCCATGACTTCTCGGGTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGCGACCCTGATTATGATCGCAATTACGATAGGTATATTAGGAACCTTCCAATCAATCAAAACTTTAGCTTGGCGCCCTTTGTTATGCCTAAAATTCAGCCTCCATTTGTGCAATACGATTCGGGTTATTCTCTCATGGGTCATATACCTGGAACTCAAGCTTCAGTTAGCTATGGGCCTCATCCGAGTCCTGCTGTAAGCCCTTTCTGCACAGTGGGTTTAAACCAAACATCTAGAGATGCATCTTATGAACAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCGTACAACCAGCTCAGGCATTCTGCTTTTCAGGTACTATTTAATAACGAGGCTTTTCCCATTGCAAAAAGGTTGCAAGCCCCATTCATCCAGCAACCCCTCAGCTTTGACTATTCACAAAACCATTAG

Protein sequence

MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSPFCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQVLFNNEAFPIAKRLQAPFIQQPLSFDYSQNH

Homology

[Close]

BLAST of CmoCh06G000290 vs. ExPASy Swiss-Prot
Match: Q80TM6 (R3H domain-containing protein 2 OS=Mus musculus OX=10090 GN=R3hdm2 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 1.1e-12
Identity = 58/165 (35.15%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 15  GIDSMVDPFLVEAL-QNPRHRLTILRMELDIQKFLHNPDQQHFEFQHFP--TSYLRLAAH 74
           GID  +  FLV  L +NPR R+ +L++E +I  F+++ + Q   F+ FP  TSY R+  H
Sbjct: 151 GID--LHEFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLH 210

Query: 75  RVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEKHEQVKIVIR 134
           RVA ++G+     D  VD  G  +++ KT+ +R+P    SE   K   N + +Q  I+ R
Sbjct: 211 RVAAYFGM-----DHNVDQTGKAVIINKTSSTRIPEQRFSE-HIKDEKNTEFQQRFILKR 270

Query: 135 -----PRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFS 172
                 R +    +   DG       +S+EER+EEY R R RIF+
Sbjct: 271 DDASMDRDDNQMRVPLQDG----RRSKSIEEREEEYQRVRERIFA 300

[Close]

BLAST of CmoCh06G000290 vs. ExPASy Swiss-Prot
Match: Q15032 (R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3)

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-12
Identity = 60/165 (36.36%), Postives = 87/165 (52.73%), Query Frame = 0


Query: 15  GIDSMVDPFLVEALQ-NPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLRLAAHRV 74
           GID  +  FLV  L+ NPR R+ +L++E +I  F+ N +    +F    TSY R+  HRV
Sbjct: 150 GID--LHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRV 209

Query: 75  AQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEKHEQV-KIVIRP 134
           A ++GL     D  VD  G  ++V KT+ +R+P    +E     + ++K E   K  I  
Sbjct: 210 AAYFGL-----DHNVDQSGKSVIVNKTSNTRIPDQKFNE----HIKDDKGEDFQKRYILK 269

Query: 135 RPNKMSEISANDGGLKQSSVR---SVEERKEEYDRARARIFSSPS 175
           R N   +   N   ++    R   S+EER+EEY RAR RIFS  S
Sbjct: 270 RDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDS 302

[Close]

BLAST of CmoCh06G000290 vs. ExPASy Swiss-Prot
Match: A0JNC2 (R3H domain-containing protein 2 OS=Bos taurus OX=9913 GN=R3HDM2 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-12
Identity = 58/165 (35.15%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 15  GIDSMVDPFLVEAL-QNPRHRLTILRMELDIQKFLHNPDQQHFEFQHFP--TSYLRLAAH 74
           GID  +  FLV  L +NPR R+ +L++E +I  F+++ + Q   F+ FP  TSY R+  H
Sbjct: 151 GID--LHEFLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLH 210

Query: 75  RVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEKHEQVKIVIR 134
           RVA ++G+     D  VD  G  +++ KT+ +R+P    SE   K   N + +Q  I+ R
Sbjct: 211 RVAAYFGM-----DHNVDQTGKAVIINKTSNTRIPEQRFSE-HIKDEKNTEFQQRFILKR 270

Query: 135 -----PRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFS 172
                 R +    +   DG       +S+EER+EEY R R RIF+
Sbjct: 271 DDASMDRDDNQIRVPLQDG----RRSKSIEEREEEYQRVRERIFA 300

[Close]

BLAST of CmoCh06G000290 vs. ExPASy Swiss-Prot
Match: Q9DCB4 (cAMP-regulated phosphoprotein 21 OS=Mus musculus OX=10090 GN=Arpp21 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-10
Identity = 58/190 (30.53%), Postives = 93/190 (48.95%), Query Frame = 0


Query: 15  GIDSMVDPFLVEALQ-NPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLRLAAHRV 74
           GID  +  FL+  L+ N R R+ +L+ME ++  F+ + +  + +F    +SY R+  HRV
Sbjct: 145 GID--LHGFLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRV 204

Query: 75  AQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEKHEQVKIVIRPR 134
           A ++GL     D  VD  G  +++ KT+ +R+P     E      D +  E  K  I  R
Sbjct: 205 AAYFGL-----DHNVDQTGKSVIINKTSSTRIPEQRFCE---HLKDEKSEESQKRFILKR 264

Query: 135 PNKMSEISANDGGL----KQSSVRSVEERKEEYDRARARIFS-----SPSSPELDDTTSQ 194
            N   +   N   +         +S+EER+EEY R R RIF+     S  S  LD++  Q
Sbjct: 265 DNSSIDKEDNQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQESLFLDNSRLQ 320

[Close]

BLAST of CmoCh06G000290 vs. ExPASy Swiss-Prot
Match: Q9UBL0 (cAMP-regulated phosphoprotein 21 OS=Homo sapiens OX=9606 GN=ARPP21 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-10
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 0


Query: 15  GIDSMVDPFLVEALQ-NPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLRLAAHRV 74
           GID  +  FL+  L+ N R R+ +L+ME +I  F+ + +  + +F    +SY R+  HRV
Sbjct: 146 GID--LHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRV 205

Query: 75  AQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEK-HEQVKIVIRP 134
           A ++GL     D  VD  G  +++ KT+ +R+P     E     L +EK  E  K  I  
Sbjct: 206 AAYFGL-----DHNVDQTGKSVIINKTSSTRIPEQRFCE----HLKDEKGEESQKRFILK 265

Query: 135 RPNKMSEISANDGG-----LKQSSVRSVEERKEEYDRARARIFSSPS 175
           R N   +   N              +S+EER+EEY R R RIF+  S
Sbjct: 266 RDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDS 300

[Close]

BLAST of CmoCh06G000290 vs. ExPASy TrEMBL
Match: A0A6J1FYH7 (uncharacterized protein LOC111448686 OS=Cucurbita moschata OX=3662 GN=LOC111448686 PE=4 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 3.9e-199
Identity = 354/369 (95.93%), Postives = 354/369 (95.93%), Query Frame = 0


Query: 1   MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH 60
           MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH
Sbjct: 1   MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDN 120

Query: 121 EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD
Sbjct: 121 EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD 180

Query: 181 TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMTSRVAIFKDREKDRSDPDYDRN 240
           TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP 300
           YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP
Sbjct: 241 YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP 300

Query: 301 FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQVLFNNEAFPIAKRLQAPFIQQP 360
           FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAF               QAPFIQQP
Sbjct: 301 FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAF---------------QAPFIQQP 354

Query: 361 LSFDYSQNH 370
           LSFDYSQNH
Sbjct: 361 LSFDYSQNH 354

[Close]

BLAST of CmoCh06G000290 vs. ExPASy TrEMBL
Match: A0A6J1I664 (uncharacterized protein LOC111469995 OS=Cucurbita maxima OX=3661 GN=LOC111469995 PE=4 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 9.7e-198
Identity = 352/369 (95.39%), Postives = 353/369 (95.66%), Query Frame = 0


Query: 1   MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH 60
           MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH
Sbjct: 1   MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILV KTAESRLPSVHLSEIPAKQLDN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVCKTAESRLPSVHLSEIPAKQLDN 120

Query: 121 EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD
Sbjct: 121 EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD 180

Query: 181 TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMTSRVAIFKDREKDRSDPDYDRN 240
           TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAM+SRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMSSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP 300
           YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP
Sbjct: 241 YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP 300

Query: 301 FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQVLFNNEAFPIAKRLQAPFIQQP 360
           FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAF               QAPFIQQP
Sbjct: 301 FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAF---------------QAPFIQQP 354

Query: 361 LSFDYSQNH 370
           LSFDYSQNH
Sbjct: 361 LSFDYSQNH 354

[Close]

BLAST of CmoCh06G000290 vs. ExPASy TrEMBL
Match: A0A0A0LFE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G817720 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.2e-179
Identity = 318/369 (86.18%), Postives = 333/369 (90.24%), Query Frame = 0


Query: 1   MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH 60
           M++ASFD  PQGFN  +SMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQ FEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSG+DGFGNRI+VRK AE+RLPSV LSEIPAKQLDN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMAENRLPSVRLSEIPAKQLDN 120

Query: 121 EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EKHEQVKIVIRPRPNKMS ISAN+GG KQSSVRSVEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRSVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ PSEGKY CSNRDETEGCRTLG +LEKFNGRD MTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQIPSEGKYACSNRDETEGCRTLGGELEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP 300
           YDRYIRNLP NQN SLAPF+MPK+QPPFVQYDSGYSL+GH+PGTQASV+YGPHPSP VSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKVQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSPVVSP 300

Query: 301 FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQVLFNNEAFPIAKRLQAPFIQQP 360
           FC +GLNQ SRDASYEQWQSAAMMYAHSYNQ RHSAF               QAPF QQP
Sbjct: 301 FCAMGLNQASRDASYEQWQSAAMMYAHSYNQFRHSAF---------------QAPFCQQP 354

Query: 361 LSFDYSQNH 370
           LSFDYSQNH
Sbjct: 361 LSFDYSQNH 354

[Close]

BLAST of CmoCh06G000290 vs. ExPASy TrEMBL
Match: A0A1S3B8A9 (uncharacterized protein LOC103486865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486865 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.9e-177
Identity = 315/369 (85.37%), Postives = 331/369 (89.70%), Query Frame = 0


Query: 1   MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH 60
           M++ASFD  PQGFN  +SMVDPFLVEALQNPRHRLTILRMELDIQKFL+NPDQQ FEFQH
Sbjct: 1   MESASFDPTPQGFNDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLNNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSG+DGFGNRI+VRK  E+RLPSV LSEIPAKQLDN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRIVVRKMVENRLPSVRLSEIPAKQLDN 120

Query: 121 EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EKHEQVKIVIRPRPNKMS ISAN+GG KQSSVR+VEERKEEYDRARARIFSSPSSPE+DD
Sbjct: 121 EKHEQVKIVIRPRPNKMSGISANEGGHKQSSVRTVEERKEEYDRARARIFSSPSSPEIDD 180

Query: 181 TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMTSRVAIFKDREKDRSDPDYDRN 240
           T SQ PSEGKY CSNRDETEGCRTLG DLEKFNGRD MTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TISQTPSEGKYACSNRDETEGCRTLGGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP 300
           YDRYIRNLP NQN SLAPF+MPKIQPPFVQYDSGYSL+GH+PGTQASV+YGPHPS  VSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFIMPKIQPPFVQYDSGYSLVGHMPGTQASVNYGPHPSSVVSP 300

Query: 301 FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQVLFNNEAFPIAKRLQAPFIQQP 360
           FC +GLNQ SRDASYEQWQ+AAMMYAHSYNQ RHSAF               QAPF QQP
Sbjct: 301 FCAMGLNQASRDASYEQWQNAAMMYAHSYNQFRHSAF---------------QAPFCQQP 354

Query: 361 LSFDYSQNH 370
           LSFDYSQNH
Sbjct: 361 LSFDYSQNH 354

[Close]

BLAST of CmoCh06G000290 vs. ExPASy TrEMBL
Match: A0A6J1F3M8 (uncharacterized protein LOC111441873 OS=Cucurbita moschata OX=3662 GN=LOC111441873 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 2.0e-174
Identity = 313/369 (84.82%), Postives = 327/369 (88.62%), Query Frame = 0


Query: 1   MDTASFDVAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQH 60
           M++ASF+  PQGF   +SMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQ FEFQH
Sbjct: 1   MESASFEPTPQGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQLFEFQH 60

Query: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDN 120
           FPTSYLRLAAHRVAQHYGLQTMVQDSG+DGFGNRILVRKT E+RLPSV LSEIPAKQ DN
Sbjct: 61  FPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTVENRLPSVRLSEIPAKQFDN 120

Query: 121 EKHEQVKIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDD 180
           EK+EQVK VIRPRPNKMSE SANDGGLKQ+SVRSVEERKEEYDRARARIFSSPSSPELDD
Sbjct: 121 EKNEQVKFVIRPRPNKMSETSANDGGLKQNSVRSVEERKEEYDRARARIFSSPSSPELDD 180

Query: 181 TTSQAPSEGKYVCSNRDETEGCRTLGIDLEKFNGRDAMTSRVAIFKDREKDRSDPDYDRN 240
           TTSQ+PSEGKY CSNRDETEG RTL  DLEKFNGRD MTSRVAIFKDREKDRSDPDYDRN
Sbjct: 181 TTSQSPSEGKYACSNRDETEGFRTLAGDLEKFNGRDGMTSRVAIFKDREKDRSDPDYDRN 240

Query: 241 YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP 300
           YDRYIRNLP NQN SLAPF M K+QPPFVQ D GYSLMGHIPGTQ S+SYGPHPSP VSP
Sbjct: 241 YDRYIRNLPTNQNLSLAPFTMQKMQPPFVQCDMGYSLMGHIPGTQPSLSYGPHPSPVVSP 300

Query: 301 FCTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQVLFNNEAFPIAKRLQAPFIQQP 360
           F  +G+N+TSRDASYEQWQSAAMMYAHSYNQLRHSAF               QAPF QQP
Sbjct: 301 FSAMGMNRTSRDASYEQWQSAAMMYAHSYNQLRHSAF---------------QAPFCQQP 354

Query: 361 LSFDYSQNH 370
           LSFDYSQNH
Sbjct: 361 LSFDYSQNH 354

[Close]

BLAST of CmoCh06G000290 vs. TAIR 10
Match: AT3G56680.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 335.1 bits (858), Expect = 7.1e-92
Identity = 189/364 (51.92%), Postives = 236/364 (64.84%), Query Frame = 0


Query: 8   VAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLR 67
           +   GFN     VDPFLVEAL N RHRLTILRMELD+Q+ L NP+QQ FEFQHFPTSYLR
Sbjct: 17  IGDYGFN-----VDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQHFPTSYLR 76

Query: 68  LAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIP-AKQLDNEKHEQV 127
           LAAHRVA HYGL T VQ+SG DG  NRILV KT ES+ P+V LSEIP AKQ +N K E  
Sbjct: 77  LAAHRVANHYGLATAVQESGADGNENRILVTKTTESKFPAVRLSEIPVAKQSENGKFESR 136

Query: 128 KIVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQAP 187
           K+ I+ RP+K S   A D    +  +RSVEERKEEYD+AR RIFS  +    DD++S+  
Sbjct: 137 KVSIKTRPSKGSGYGAGDLEKNRGPLRSVEERKEEYDKARERIFSGLTGLSCDDSSSETQ 196

Query: 188 SEGKYVCSNRDETEGCRTLGIDLEKFNG--RDAMTSRVAIFKDREKDRSDPDYDRNYDRY 247
              +    +RD+ +  +   ++++K         TSRVAIF+DREKDR DPDYDR + RY
Sbjct: 197 VYERNASLSRDDKQVSKNAYVEVKKNLSIRESGPTSRVAIFRDREKDRFDPDYDRRHQRY 256

Query: 248 IRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSPFCTV 307
           IR+LP+NQNF+L PF + +I  P+  Y+ G++    IP   A + +GPHPS  +SP+   
Sbjct: 257 IRSLPVNQNFNLPPFNIQQIPTPY--YEMGFTGYNQIPSPPAPLGFGPHPSSIMSPY--- 316

Query: 308 GLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQVLFNNEAFPIAKRLQAPFIQQPLSFD 367
               T+ DA Y  W +AAMMYAH Y Q R+ +               LQA F+QQPLSFD
Sbjct: 317 ---GTTMDAMYMHWPNAAMMYAHPYEQFRNGS---------------LQAQFVQQPLSFD 352

Query: 368 YSQN 369
           Y QN
Sbjct: 377 YMQN 352

[Close]

BLAST of CmoCh06G000290 vs. TAIR 10
Match: AT2G40960.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 313.5 bits (802), Expect = 2.2e-85
Identity = 185/365 (50.68%), Postives = 238/365 (65.21%), Query Frame = 0


Query: 8   VAPQGFNGIDSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLR 67
           +A +GFN     VDPFLVEALQNPRHRLTILRMELD+Q+FL +PDQQ FEFQHFPTSYLR
Sbjct: 14  IADKGFN-----VDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLR 73

Query: 68  LAAHRVAQHYGLQTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEKHEQVK 127
            AAHRVA HYGL T V+D G DG  +RI+V K+++SR P+  LSEIP KQ +  K E +K
Sbjct: 74  FAAHRVANHYGLITSVRDGGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMK 133

Query: 128 IVIRPRPNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQAPS 187
           +VI+PRP K S +  ++  LK   ++SVEERKE+YDRARARIF+   + + +D++S+   
Sbjct: 134 VVIKPRPTKGSGMEGDE--LKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETNP 193

Query: 188 EGKYVCSNRDETEGCRTLGIDLEKFN--GRDAMTSRVAIFKDREKDRSDPDYDRNYDRYI 247
                 S+RDE +  +   I+ +K N   +    SR+AI +DREKDR DPDYDR+  RYI
Sbjct: 194 WRVNCSSSRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRYI 253

Query: 248 RNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSPFCTVG 307
            NLP++QN  +A F +  +  P   YD G+   G+ P    S++ G H    +SP  T G
Sbjct: 254 SNLPVDQNLCVAHFNIQTMGTPI--YDMGF--RGYSPTAPPSLNLGQH--SVMSPCVTTG 313

Query: 308 LNQTSRDAS-YEQW-QSAAMMYAHSYNQLRHSAFQVLFNNEAFPIAKRLQAPFIQQPLSF 367
           LNQ SRDA+ Y QW  +AA+MY HSY+  R+S F               QA F  QPLSF
Sbjct: 314 LNQPSRDAAMYMQWPNAAAVMYTHSYDHFRNSPF---------------QAQFYPQPLSF 350

Query: 368 DYSQN 369
           DY QN
Sbjct: 374 DYMQN 350

[Close]

BLAST of CmoCh06G000290 vs. TAIR 10
Match: AT3G10770.2 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 290.4 bits (742), Expect = 2.0e-78
Identity = 177/323 (54.80%), Postives = 216/323 (66.87%), Query Frame = 0


Query: 17  DSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLRLAAHRVAQH 76
           ++MVDPFLVEALQNPRHRLTILRMELDIQKF  NP+Q  FEF  FPTSYLRLAAHRVAQH
Sbjct: 8   EAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQH 67

Query: 77  YGLQTMVQDSGV---DGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEKHEQVKIVIRPR 136
           YGL TM  D+G    DG  NRILV KTAESR P V LSEIP KQ +N + E  KI I+PR
Sbjct: 68  YGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIKPR 127

Query: 137 PNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQAPS--EGKY 196
           P + S    +  G++Q+ +RSVEERKEEYD+ARARIF+SPSS + +D++S  P   E + 
Sbjct: 128 PKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPPSLEVRN 187

Query: 197 VCSNRDETE-GCRTLGID-LEKFNGRDAMTSRVAIFKDREKDRSDPDYDRNYDRYIRNLP 256
            C NR+ETE       +D + + +GR   TSRVAI +DREKDR DPDYDR+YDRY+R +P
Sbjct: 188 TCINRNETEVAVNNSPVDAVTRDSGR---TSRVAIIRDREKDRYDPDYDRSYDRYVRVMP 247

Query: 257 INQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIP-GTQASVSYGPHPSPAVSPFCTVGLNQ 316
             Q+FS  P  +P        +  G+    H+P G QA+++YG   +PA+SPF       
Sbjct: 248 SGQSFSPMPIHIP--------FHDGF--FPHMPRGHQANLNYGHPLNPALSPF------- 307

Query: 317 TSRDASYEQW-QSAAMMYAHSYN 331
           T   ASY  W  S  M YA   N
Sbjct: 308 THNVASYTPWPNSPVMNYAQPLN 310

[Close]

BLAST of CmoCh06G000290 vs. TAIR 10
Match: AT3G10770.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-76
Identity = 177/331 (53.47%), Postives = 216/331 (65.26%), Query Frame = 0


Query: 17  DSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLRLAAHRVAQH 76
           ++MVDPFLVEALQNPRHRLTILRMELDIQKF  NP+Q  FEF  FPTSYLRLAAHRVAQH
Sbjct: 8   EAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQH 67

Query: 77  YGLQTMVQDSGV---DGFGNRILVRKTAESRLPSVHLSEIPAKQLDNEKHEQVKIVIRPR 136
           YGL TM  D+G    DG  NRILV KTAESR P V LSEIP KQ +N + E  KI I+PR
Sbjct: 68  YGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFKIAIKPR 127

Query: 137 PNKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQAPS--EGKY 196
           P + S    +  G++Q+ +RSVEERKEEYD+ARARIF+SPSS + +D++S  P   E + 
Sbjct: 128 PKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPPSLEVRN 187

Query: 197 VCSNRDETE-GCRTLGID-LEKFNGRDAMTSRVAIFKDREKDRSDPDYDRNYD------- 256
            C NR+ETE       +D + + +GR   TSRVAI +DREKDR DPDYDR+YD       
Sbjct: 188 TCINRNETEVAVNNSPVDAVTRDSGR---TSRVAIIRDREKDRYDPDYDRSYDRYVVDPA 247

Query: 257 -RYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIP-GTQASVSYGPHPSPAVSP 316
            RY+R +P  Q+FS  P  +P        +  G+    H+P G QA+++YG   +PA+SP
Sbjct: 248 YRYVRVMPSGQSFSPMPIHIP--------FHDGF--FPHMPRGHQANLNYGHPLNPALSP 307

Query: 317 FCTVGLNQTSRDASYEQW-QSAAMMYAHSYN 331
           F       T   ASY  W  S  M YA   N
Sbjct: 308 F-------THNVASYTPWPNSPVMNYAQPLN 318

[Close]

BLAST of CmoCh06G000290 vs. TAIR 10
Match: AT5G05100.1 (Single-stranded nucleic acid binding R3H protein )

HSP 1 Score: 273.5 bits (698), Expect = 2.5e-73
Identity = 172/330 (52.12%), Postives = 216/330 (65.45%), Query Frame = 0


Query: 17  DSMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPDQQHFEFQHFPTSYLRLAAHRVAQH 76
           ++MVDPFLVEALQNPRHRLTILRMELDIQKF  +P+QQ +EFQ  PTSYLRL AHRVAQH
Sbjct: 8   EAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIAHRVAQH 67

Query: 77  YGL-QTMVQDSGVDGFGNRILVRKTAESRLPSVHLSEIPAKQLD-NEKHEQVKIVIRPRP 136
           YGL  T ++  GVDG GNRIL  KT ESR P V LSEIP KQ + + + E  KI I+PRP
Sbjct: 68  YGLFTTALEGGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGFKIAIKPRP 127

Query: 137 NKMSEISANDGGLKQSSVRSVEERKEEYDRARARIFSSPSSPELDDTTSQAP-------- 196
           N+ +  S +  G++++ +RSVEERKEEYD+ARARIF+SPSS + +D++++AP        
Sbjct: 128 NRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSTRAPPPPYPRLD 187

Query: 197 SEGKYVCSNRDETE---GCRTLGIDLEKFNG--RDA-MTSRVAIFKDREKDRSDPDYDRN 256
           S+    C +R+ETE      +  +D+E+ NG  RD+  TSRVAI +DREKDR DPDYDRN
Sbjct: 188 SKHNTACPSRNETEVVVNYNSNPVDVER-NGVIRDSGRTSRVAIIRDREKDRYDPDYDRN 247

Query: 257 YDRYIRNLPINQNFSLAPFVMPKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPAVSP 316
             RY+R  P  QNF+  P  +P     F Q          +P TQAS++YG HP      
Sbjct: 248 --RYVRVAPPVQNFNPIPIPLPFHDAIFPQ----------MPRTQASLNYG-HP------ 307

Query: 317 FCTVGLNQTSRDASYEQWQSAAMMYAHSYN 331
                LN      SY +W SA M YA + N
Sbjct: 308 -----LNPAMTAPSYTEWPSATMTYAQTLN 312

The following BLAST results are available for this feature:

BLAST of CmoCh06G000290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80TM6	1.1e-12	35.15	R3H domain-containing protein 2 OS=Mus musculus OX=10090 GN=R3hdm2 PE=1 SV=2	[more]
Q15032	1.4e-12	36.36	R3H domain-containing protein 1 OS=Homo sapiens OX=9606 GN=R3HDM1 PE=1 SV=3	[more]
A0JNC2	1.4e-12	35.15	R3H domain-containing protein 2 OS=Bos taurus OX=9913 GN=R3HDM2 PE=2 SV=1	[more]
Q9DCB4	3.0e-10	30.53	cAMP-regulated phosphoprotein 21 OS=Mus musculus OX=10090 GN=Arpp21 PE=1 SV=2	[more]
Q9UBL0	3.9e-10	32.93	cAMP-regulated phosphoprotein 21 OS=Homo sapiens OX=9606 GN=ARPP21 PE=1 SV=2	[more]

BLAST of CmoCh06G000290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYH7	3.9e-199	95.93	uncharacterized protein LOC111448686 OS=Cucurbita moschata OX=3662 GN=LOC1114486...	[more]
A0A6J1I664	9.7e-198	95.39	uncharacterized protein LOC111469995 OS=Cucurbita maxima OX=3661 GN=LOC111469995...	[more]
A0A0A0LFE9	1.2e-179	86.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G817720 PE=4 SV=1	[more]
A0A1S3B8A9	1.9e-177	85.37	uncharacterized protein LOC103486865 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1F3M8	2.0e-174	84.82	uncharacterized protein LOC111441873 OS=Cucurbita moschata OX=3662 GN=LOC1114418...	[more]

BLAST of CmoCh06G000290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56680.1	7.1e-92	51.92	Single-stranded nucleic acid binding R3H protein	[more]
AT2G40960.1	2.2e-85	50.68	Single-stranded nucleic acid binding R3H protein	[more]
AT3G10770.2	2.0e-78	54.80	Single-stranded nucleic acid binding R3H protein	[more]
AT3G10770.1	3.2e-76	53.47	Single-stranded nucleic acid binding R3H protein	[more]
AT5G05100.1	2.5e-73	52.12	Single-stranded nucleic acid binding R3H protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001374	R3H domain	SMART	SM00393	R3H_4	coord: 18..100 e-value: 1.6E-12 score: 57.6
IPR001374	R3H domain	PFAM	PF01424	R3H	coord: 36..87 e-value: 3.0E-14 score: 52.7
IPR001374	R3H domain	PROSITE	PS51061	R3H	coord: 34..101 score: 10.455058
IPR036867	R3H domain superfamily	GENE3D	3.30.1370.50		coord: 15..133 e-value: 8.8E-32 score: 111.4
IPR036867	R3H domain superfamily	SUPERFAMILY	82708	R3H domain	coord: 11..123
IPR024771	SUZ domain	PFAM	PF12752	SUZ	coord: 125..173 e-value: 6.7E-10 score: 39.6
IPR024771	SUZ domain	PROSITE	PS51673	SUZ	coord: 104..174 score: 12.448105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..156
None	No IPR available	PANTHER	PTHR15672:SF15	OS05G0411600 PROTEIN	coord: 11..369
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 11..369
None	No IPR available	CDD	cd02642	R3H_encore_like	coord: 33..100 e-value: 9.02346E-19 score: 77.6429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000290.1	CmoCh06G000290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding