CmoCh06G000230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transmembrane amino acid transporter family protein
Location	Cmo_Chr06: 147063 .. 149497 (-)
RNA-Seq Expression	CmoCh06G000230
Synteny	CmoCh06G000230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGAAATTGCTTCCTTGACACTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTACCACGTAGAATTTCAAATAGCTTCTGGTGTTTCATTCTTCTAAGAACAGCACTTGTTGTTTCTTCTGTTTGCGTGGCCTTCCTTCTGCCCTTTTTTGGTAATTGTCTTCTTCAAGTGTTTTGTTATTAGTTTACTTTCATTTTGTAAGTCATCTTAACATAATGGATTGTAATATAATGGATGATTATTACCTTTCCACTGACGCAATAGATGATGATAACCCTCCAAAAACAAACTTTCATCTAGTACCCCCAAATTGTTAGCTCATATATTCTCATGATAGGAACTCATTGATTAAGCATCTTGCTGTAAAGCCAAATTGTTAACTTTCCATGAGTAGCTTTATCCAAACATGGCAGATGAATTGAGCGTAAATAAAGCAGATTACTATTTATCTTGATTGTAGGTCTCGTGATGGCTTTGATTGGCTCCCTTCTCAGCATACTTTTGGTAAGTGCATTTTGTTGGTTCCTTTTCTTGATGAGATTGTATTCTTGTTTCTCCATTGCCCTTCGTTTTAGCTCATAGCTAGTTGTACCTAATGATCGTCAATATGTCAGATTTTAAATGGTCAACCAGCGGGCTGTTAGCTGTTAGCTGTTAATTGTTGGTAGCTTTTGTTATATAACTGCCATTAACATTTATTTTTTGGGTTAAAGAAATATAACCTTTCATTTGAGCATTAAGATCCACCCCTTCCAATCGTGCTCTTCAAGGGATAATCAAGTCAATTTAGCACGTTTCCACTGTTTTTCTCTGACTGAGATTTCTTCCATAGCTAATCAGCCCCGACTTTTAATATGTATCCGAAATATTTGCTTGAACGAAGGAAGGGATAATCATATATTCTTTAGATGTGGGTACATTCAACTTGAAGTGCGTTCCTATTTACTTGAGCAATAGGTGAAAAGGTTGATGGAAAATTAAAAATATAATTTGTGTATGTCATTGTCTATTAATTTCCATTCTTCGATCATCTCCCCTTCACCCTCCTCTAGAGCCTATTGGTAGCTGAACCATGGTGAATTGCCCAGTTTGTTATCAGTCAAAATCTACTAAGAGTTGGACTTAGGCTTGTTCATTTGTCTTCTTATGGATATGGATGTGTTTCTAATTGTATGATATTTGATTCAGGCGGTAATAGTGCCAGCCGTATGTTTTTTGAAAATCATGGGAGGCGAAGCTTCAAAGATGCAGGTATGCATCTTTTTAACTTATTATTTTTTTCTTTTTTTTTTAATTAAGCTTCTTGATAAAGTTTTATGAATTACAATAGTAGGGAGATAGTCCTCTTATATCCAGTATTCCCTTCTCAAGAAATAACAATGGACGCAATATATTGTGAATTTCATGAGGAAACTAATAGAATGTTAAGAAAGTTACATAAAACTTCTTTAGAGGATCATGGATGAACTAACGCAAGTCTAATCACTCAACTAAGAAAACCAATTACACTCAGACCCTCACTGTAACTTGAGGTTTTATGAAGTTTGAGCTTGGTACACGGATATTTAAACGGTCGAGGCATTTTGCTATTTCGTGAGCTGTTTGAATTTCTGTTTTAACATATTTCTCGTAGGGAAAGAGAATGAGAAATATTGTAAGGGAAAAAAAAAGGAAAAAAAACTCTAGAATGGGTGGATTGGGTGGCTGTGTAATGCAGGAAATCATTTTCTCTTAATAGGACTTGGAGTTTGTTCTGCAGAGAGACAAGATAGGAAAAGGAGAGTTGGTGTAGGCACAGAATATAATTAATCAGTGTGATTACACATTAATATTCTTAGTGTAAGGTTTATGGAGAAAGTAAGAAATGAGTATGATTACACTAACATTCATAGAAATTTACCGCCTGAACATTGGGAAATTCAAAACCAGCAGCAGAACTTCTCACTATGATTACACAATTTTCTTAAAGCTGTCTTTGACTCTTTATAAAAATTCATGTTCTATCCGAAAACGTTAAATGAAACATCTGTAATTTCTTATTCATTTGGTTTCTTTATTCTCCTTCTTCGTGAAATCAGATGACTTGGAGCAGCTTTATCATTGGACTCGGTGTCCTTAGTGCAATCTTTGGAACATACTCTTCTGTGTCACAGATTGCAGAGAGTTACTGAAACATATATGGTCAGAATAAATTTTCTGTAGGCTTCGTGTCTTGTAGCTGTCGATAGCTTCAGGTCATACATTATGCAAGCAGTTGACTTCTAAATAATTGCATATCCATTATTGCTTAATTGTTGTGTTGCCTCTCTTTATTGGGTGAAGATGTTGATTTCATGTTTGCTTATGCTGCTTAGATTAGCTATTTCTTTTGTGGTTTCGTCTTCACAAACATTCCATTTGGTCTGCGC

mRNA sequence

ATGATTGAAATTGCTTCCTTGACACTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTACCACGTAGAATTTCAAATAGCTTCTGGTGTTTCATTCTTCTAAGAACAGCACTTGTTGTTTCTTCTGTTTGCGTGGCCTTCCTTCTGCCCTTTTTTGGTCTCGTGATGGCTTTGATTGGCTCCCTTCTCAGCATACTTTTGGCGGTAATAGTGCCAGCCGTATGTTTTTTGAAAATCATGGGAGGCGAAGCTTCAAAGATGCAGATGACTTGGAGCAGCTTTATCATTGGACTCGGTGTCCTTAGTGCAATCTTTGGAACATACTCTTCTGTGTCACAGATTGCAGAGAGTTACTGAAACATATATGGTCAGAATAAATTTTCTGTAGGCTTCGTGTCTTGTAGCTGTCGATAGCTTCAGGTCATACATTATGCAAGCAGTTGACTTCTAAATAATTGCATATCCATTATTGCTTAATTGTTGTGTTGCCTCTCTTTATTGGGTGAAGATGTTGATTTCATGTTTGCTTATGCTGCTTAGATTAGCTATTTCTTTTGTGGTTTCGTCTTCACAAACATTCCATTTGGTCTGCGC

Coding sequence (CDS)

ATGATTGAAATTGCTTCCTTGACACTGCTCAAATATGCACTGTTGATGAATCCATTGGCAAGAAGTATAGAGGAGCTACTACCACGTAGAATTTCAAATAGCTTCTGGTGTTTCATTCTTCTAAGAACAGCACTTGTTGTTTCTTCTGTTTGCGTGGCCTTCCTTCTGCCCTTTTTTGGTCTCGTGATGGCTTTGATTGGCTCCCTTCTCAGCATACTTTTGGCGGTAATAGTGCCAGCCGTATGTTTTTTGAAAATCATGGGAGGCGAAGCTTCAAAGATGCAGATGACTTGGAGCAGCTTTATCATTGGACTCGGTGTCCTTAGTGCAATCTTTGGAACATACTCTTCTGTGTCACAGATTGCAGAGAGTTACTGA

Protein sequence

MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY

Homology

[Close]

BLAST of CmoCh06G000230 vs. ExPASy Swiss-Prot
Match: O80668 (Amino acid transporter AVT1A OS=Arabidopsis thaliana OX=3702 GN=AVT1A PE=2 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-36
Identity = 80/115 (69.57%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 11  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 70
           KYALLMNPLARSIEELLP R+S + WCF+LLRTALV SSVC AFL+PFFGL+MALIGSLL
Sbjct: 421 KYALLMNPLARSIEELLPERMSENIWCFLLLRTALVASSVCSAFLIPFFGLMMALIGSLL 480

Query: 71  SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY 126
           SIL+A+I+PA+CF+KIMG +A++ QM  SS I+ +GV+S   GTYSSV++I  +Y
Sbjct: 481 SILVAIIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYSSVAKIIRNY 535

[Close]

BLAST of CmoCh06G000230 vs. ExPASy Swiss-Prot
Match: F4IUW3 (Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-18
Identity = 53/113 (46.90%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 11  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 70
           KYAL ++P+A S+EEL+P R   S W  I +RT LV S++ V   +PFFGLVM+LIGSLL
Sbjct: 434 KYALTISPVAMSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFFGLVMSLIGSLL 493

Query: 71  SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAE 124
           ++L+ +I+P  CFL I+  + +  QM     II +G +S++ G+YS++S+I E
Sbjct: 494 TMLVTLILPPACFLSIVRRKVTPTQMMLCVLIIIVGAISSVIGSYSALSKIVE 546

[Close]

BLAST of CmoCh06G000230 vs. ExPASy Swiss-Prot
Match: F4JE35 (Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 47/113 (41.59%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 11  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 70
           KYAL ++P+A S+EEL+P     S +  I +R+AL +S++ V   +PFFGLVM+LIGS L
Sbjct: 424 KYALTLSPVAMSLEELIPSNYGKSRFYAIAIRSALAISTLLVGLAIPFFGLVMSLIGSFL 483

Query: 71  SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAE 124
           ++L+ +I+P  CFL I+  + +  Q+T    I+ +G + ++ GTYS++++I E
Sbjct: 484 TMLITLILPPACFLSILRKKVTPTQVTICILIMTVGAVCSVIGTYSALAKIIE 536

[Close]

BLAST of CmoCh06G000230 vs. ExPASy Swiss-Prot
Match: Q8GYS4 (Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.6e-16
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 9   LLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGS 68
           + KYAL + P+  S+EEL+P     S    IL RT LV S++ VA  +PFF +V ALIGS
Sbjct: 432 MTKYALTITPIVMSLEELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFFAIVAALIGS 491

Query: 69  LLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIA 123
            L++L+A+I P +C+L I+ G+ S  Q+    FII  GV+S   GTYS++S++A
Sbjct: 492 FLAMLVALIFPCLCYLSILKGKLSNTQIGLCIFIIVFGVVSGCCGTYSAISRLA 545

[Close]

BLAST of CmoCh06G000230 vs. ExPASy Swiss-Prot
Match: Q8LPF4 (Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-12
Identity = 45/115 (39.13%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 9   LLKYALLMNPLARSIEELLP--RRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALI 68
           + KYAL + P+  S+EEL+P   R   S    +L RT LV+S++ VA  +PFF  V ALI
Sbjct: 407 MTKYALTITPVMLSLEELIPSSSRKMRSKGVSMLFRTILVLSTLVVALTVPFFATVAALI 466

Query: 69  GSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQI 122
           GS +++L+A+I P +C++ IM G  +  Q+     I+ +G++S   GTYS+++++
Sbjct: 467 GSFIAMLIALIFPCLCYISIMKGRLTNFQIGICILIVIIGIVSGCCGTYSAIARL 521

[Close]

BLAST of CmoCh06G000230 vs. ExPASy TrEMBL
Match: A0A6J1FT41 (amino acid transporter AVT1A-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111446608 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.4e-55
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFG 60
           MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFG
Sbjct: 425 MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFG 484

Query: 61  LVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQ 120
           LVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQ
Sbjct: 485 LVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQ 544

Query: 121 IAESY 126
           IAESY
Sbjct: 545 IAESY 549

[Close]

BLAST of CmoCh06G000230 vs. ExPASy TrEMBL
Match: A0A6J1I7V6 (amino acid transporter AVT1A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469988 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.3e-55
Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFG 60
           MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFG
Sbjct: 425 MIEIASLTLLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFG 484

Query: 61  LVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQ 120
           LVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQ
Sbjct: 485 LVMALIGSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQ 544

Query: 121 IAESY 126
           IA+SY
Sbjct: 545 IAQSY 549

[Close]

BLAST of CmoCh06G000230 vs. ExPASy TrEMBL
Match: A0A6J1FMS3 (amino acid transporter AVT1A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446608 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.0e-51
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 11  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 70
           KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL
Sbjct: 418 KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 477

Query: 71  SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY 126
           SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY
Sbjct: 478 SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY 532

[Close]

BLAST of CmoCh06G000230 vs. ExPASy TrEMBL
Match: A0A6J1FMR2 (amino acid transporter AVT1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446608 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.0e-51
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 11  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 70
           KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL
Sbjct: 426 KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 485

Query: 71  SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY 126
           SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY
Sbjct: 486 SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY 540

[Close]

BLAST of CmoCh06G000230 vs. ExPASy TrEMBL
Match: A0A6J1I648 (amino acid transporter AVT1A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469988 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.3e-50
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 11  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 70
           KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL
Sbjct: 418 KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 477

Query: 71  SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY 126
           SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIA+SY
Sbjct: 478 SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAQSY 532

[Close]

BLAST of CmoCh06G000230 vs. TAIR 10
Match: AT2G41190.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 153.7 bits (387), Expect = 9.9e-38
Identity = 80/115 (69.57%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 11  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 70
           KYALLMNPLARSIEELLP R+S + WCF+LLRTALV SSVC AFL+PFFGL+MALIGSLL
Sbjct: 421 KYALLMNPLARSIEELLPERMSENIWCFLLLRTALVASSVCSAFLIPFFGLMMALIGSLL 480

Query: 71  SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAESY 126
           SIL+A+I+PA+CF+KIMG +A++ QM  SS I+ +GV+S   GTYSSV++I  +Y
Sbjct: 481 SILVAIIMPALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYSSVAKIIRNY 535

[Close]

BLAST of CmoCh06G000230 vs. TAIR 10
Match: AT2G39130.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-19
Identity = 53/113 (46.90%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 11  KYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGSLL 70
           KYAL ++P+A S+EEL+P R   S W  I +RT LV S++ V   +PFFGLVM+LIGSLL
Sbjct: 434 KYALTISPVAMSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFFGLVMSLIGSLL 493

Query: 71  SILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIAE 124
           ++L+ +I+P  CFL I+  + +  QM     II +G +S++ G+YS++S+I E
Sbjct: 494 TMLVTLILPPACFLSIVRRKVTPTQMMLCVLIIIVGAISSVIGSYSALSKIVE 546

[Close]

BLAST of CmoCh06G000230 vs. TAIR 10
Match: AT5G02180.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-17
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 9   LLKYALLMNPLARSIEELLPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIGS 68
           + KYAL + P+  S+EEL+P     S    IL RT LV S++ VA  +PFF +V ALIGS
Sbjct: 432 MTKYALTITPIVMSLEELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFFAIVAALIGS 491

Query: 69  LLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQIA 123
            L++L+A+I P +C+L I+ G+ S  Q+    FII  GV+S   GTYS++S++A
Sbjct: 492 FLAMLVALIFPCLCYLSILKGKLSNTQIGLCIFIIVFGVVSGCCGTYSAISRLA 545

[Close]

BLAST of CmoCh06G000230 vs. TAIR 10
Match: AT5G02170.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13
Identity = 45/115 (39.13%), Postives = 74/115 (64.35%), Query Frame = 0


Query: 9   LLKYALLMNPLARSIEELLP--RRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALI 68
           + KYAL + P+  S+EEL+P   R   S    +L RT LV+S++ VA  +PFF  V ALI
Sbjct: 407 MTKYALTITPVMLSLEELIPSSSRKMRSKGVSMLFRTILVLSTLVVALTVPFFATVAALI 466

Query: 69  GSLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQI 122
           GS +++L+A+I P +C++ IM G  +  Q+     I+ +G++S   GTYS+++++
Sbjct: 467 GSFIAMLIALIFPCLCYISIMKGRLTNFQIGICILIVIIGIVSGCCGTYSAIARL 521

[Close]

BLAST of CmoCh06G000230 vs. TAIR 10
Match: AT3G09330.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 72.0 bits (175), Expect = 3.8e-13
Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 9   LLKYALLMNPLARSIEEL-LPRRISNSFWCFILLRTALVVSSVCVAFLLPFFGLVMALIG 68
           + KYAL + P+   +EEL LP     S+   I ++T LV+S++ VA   PFF ++ AL+G
Sbjct: 406 MTKYALALTPIVLGLEELMLPSEKMRSYGVSIFIKTILVLSTLVVALTFPFFAIMGALMG 465

Query: 69  SLLSILLAVIVPAVCFLKIMGGEASKMQMTWSSFIIGLGVLSAIFGTYSSVSQI 122
           S L++L+  I P +C+L I+ G  SK Q+    FII  G++S   GTYS++ ++
Sbjct: 466 SFLAMLVDFIFPCLCYLSILKGRLSKTQIGICVFIIISGIVSGCCGTYSAIGRL 519

The following BLAST results are available for this feature:

BLAST of CmoCh06G000230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80668	1.4e-36	69.57	Amino acid transporter AVT1A OS=Arabidopsis thaliana OX=3702 GN=AVT1A PE=2 SV=2	[more]
F4IUW3	2.2e-18	46.90	Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1	[more]
F4JE35	1.6e-16	41.59	Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2	[more]
Q8GYS4	3.6e-16	45.61	Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1	[more]
Q8LPF4	1.8e-12	39.13	Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1	[more]

BLAST of CmoCh06G000230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FT41	2.4e-55	100.00	amino acid transporter AVT1A-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I7V6	5.3e-55	99.20	amino acid transporter AVT1A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FMS3	6.0e-51	100.00	amino acid transporter AVT1A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1FMR2	6.0e-51	100.00	amino acid transporter AVT1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I648	1.3e-50	99.13	amino acid transporter AVT1A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of CmoCh06G000230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41190.1	9.9e-38	69.57	Transmembrane amino acid transporter family protein	[more]
AT2G39130.1	1.6e-19	46.90	Transmembrane amino acid transporter family protein	[more]
AT5G02180.1	2.5e-17	45.61	Transmembrane amino acid transporter family protein	[more]
AT5G02170.1	1.3e-13	39.13	Transmembrane amino acid transporter family protein	[more]
AT3G09330.1	3.8e-13	39.47	Transmembrane amino acid transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 4..117 e-value: 1.7E-14 score: 53.4
None	No IPR available	PANTHER	PTHR48017:SF185	BNAA03G19350D PROTEIN	coord: 9..122
None	No IPR available	PANTHER	PTHR48017	OS05G0424000 PROTEIN-RELATED	coord: 9..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000230.1	CmoCh06G000230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015293	symporter activity