CmoCh06G000060 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000060
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	squamous cell carcinoma antigen recognized by T-cells 3
Location	Cmo_Chr06: 21350 .. 32467 (+)
RNA-Seq Expression	CmoCh06G000060
Synteny	CmoCh06G000060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCTGCTACGGCGGAGGCACTGCTTCACTTCTGCTCCTTTGCAACACCAGACTGTTCATTTCCGCCTCCTCTACGTCCGACGCCATGGATGCAATCAACGCCCAACTTCCGCTTTCGACCAATTCGGACGACGAAAATTTGGTCAATGGAGATGACCCAATGCCCGACCTTCCCCAGAACCCCACTTCCCCCGCCTCCGATTCTTCTTCCTCCGACTCTGATTCCGAAGTCGACGAATCCGACCAGAAGCTCCAACTCCAGACCCTTCAATCTGAGCTCTCCTCCAACCCTTCCAACTACGATGCCCATGTCCAAGTAATTTTTCTCTACTCTCTTTAATGCTTCTTCCCATCATTTCTCCCCTTCACTTCTGCATACACTAAGTTTATGCGTTACTTGTTTTTGATGCTCGCTCATCCCCACTTCTTCAAGTATATAAAACTTTTGAGGAAAGTTGGCGACATCGACAACCTGAGGAAAGCAAGGGAAGCAATGAGTGAGATGTTCCCTTTAACCCCTTCAATGTGGCAGGAATGGGCCAAAGACGAAGCGTCTATCAGTACTGGGTAATCTCGTCTATTTTACCTTTTTAGATGTCCCGTTATTTCTTTTCCGGTGGTGCAGAAGTTTCTGAAGTTGTTACTCCGTTGCTCCTTAAATTCATTAGAGAGCTCTCAATTTCAAACTTCTAACAAGCTCTTGAATCTTCAACCCTATTTCATTGTGAGAGGGTTTTGGATTTCTGTTAACCCTTTTCTTGCTAGTAGTCGGTTATGAATTAATTTTACTCTCCTTTTTCTCGTTGCCTTTGCAGACCAGAGGATGTTGCTGCAATTGAGAGGCTATATGAGCGAGGGGTGTTTGATTATCTGGTTTGTATCGGCTGCCATTTGGAGATTAGCTTTTGGTATTACGAGAGATGTTACATGTTAGACTAACAAATGCTAGCATATTAGCAGTTTATAGCTACTGCAAGCCAATTGTTACACCACATGTCCTTTTCTTCCTACACGTATCTGGAACCCCATATTATAATCAATATATTTTATACATTGTCGGATTTAACAAATTATAGCTTGGACTCTTAAGCTGAAAATTGTACTTTTACTTTTTGGACTATTAATTAGTTGCCTTGAAAATAAAGATGGTTGGCTATGTAACTCAGCTTTCTGCACGAGTTTCTACTTTCAATGTATAAAACGAATCATTTTCAAGTTTGAGGACAATAGTTTGCTTTGTAATTTTCTTTTATTCAGGATGACAATATTTTGAAATTGTACGGTGTCATGATGTTTTCAGATTTTGTTTTGTAGCACATGATTATGTGAGATGGTTAACTTTCACTATGTTATGCAGTCAGTTTCTCTTTGGTGTGACTACCTAAATTTTGTTCAAGAATATGATCCAATGGTGCGAGATCGTGCAACTTCTAGAATTAAAAAGGCTAGAGATTTATTTGAACGTGCTCTCACAGCTGCTGGTTTGCATTTTACTGAGGCTGAAAAATTATGGGAAGCATATAGAGAATTTGAGAAATCCATATATCAAAGCATTGACGAAACCGATACTCAGGTCCGAACCTCTTTCCTTTTTTTATTTTTATTTTTTATGTTTTTGGTCATCTTCTATGAGGTGTCTCATTTACGATGTAACTTAATTATATGGCTCAGAGCTATATAAATTTATTGTTTTTAAGGATTGAAGTCCCTTTGTGTAGCACTTGGAACTTCCTTTTTGTTTGTTTGTTTTTTTTAATAATATTTTTGTATGTCCTTGTATTCTCTTTCATTTTTTCTCAATAAAAGTTCGATTTCTTACACACACACACACACACAAAAAAAAAAGTGTCATTTGCTACGTTTTTGTATGTGCACTCCAATTGGAAACGGCAAAAGCAACCAAAAGTCATCGCAAGGAGCACATCTTTTTGTTGATCCTTGTTCCTTGAATACATTAAGGGTAGTATCTCATGTATGGCAAGTTTCTGATTTTTTCATAAATATTTTTCTTTCTGTTGTGGATGATCAATGAAATTAATTTTAACTTGGATAGAAATTGTACTGATGGTCAGAGTTGCATATTTTTCTGTAGGCGAAAGAAAAACAAGTCCAGCTAATCCGAAGCATTTTCCATCGTCAGTTGTCACTTCCTCTATCTAACATGAATTCAACGCTTGAGGCCTATAAGGCATGGGAGATGGAAGTGAAACAAGGCTGCATTCTTGATGGGAAATCTAATGACTCGGATGGGGTTCCTTCTCAAGTCGCCTCAGCCTATCAAAGAGCATTGGATATGTATAATGCCCGTGTTCAATTCGAAGAACAAATATCAAAACAGGATTTAACTGATACTGAAAGACTTCACCAGTACATTGTATGTTGCATTTACATTTTATTATGCGAAACAGACTTTTTGGAGTTTTAATATAATTCTTTAATTTCTTCAGATTTACCTGAAATTTGAACAATCTGCTGGAGATCCCGCAAGGGTACAAGTTCTGTTTGAGCGTGCAGTTGCTGATTTTCCAGTGGTGGTTGATCTGTGGCTTGATTATACCCGTTACATGGACAAAACTTTGAAGGTTTCTCCTTTCCAGTTTCCTATGAACTATGGATATATCTTAACATATAATTATACATGAGGTTTGGGTTTTCAGGTGAGCAATATTGTGAGGAATGTTTACTCTAGGGCGACTAGGAATTGCCCATGGATAGGTGATCTTTGGGTCCAGTATTTGCTTGCTTTGGAACGTGCTCATGCTTCTGAGGGTGAAATTGCTTCCGTAAGTTTTGACAACCACACCCTTTCTCTGGAGCAGTTCTGTTAAATATTGTTTGGTCTGATTTCATTTAACAAGATTATTATTTCACATTTGGTTCAAGAAAATCTCTCGCCAAAATTTATTTACAGTGAGCAGGGAAACACAAATAAATTACTAAAATTTGCAAGACTACTTCATTTGCCTCTATAATCCAATCTCTTGAATCTTCTTCTTTTTTGATCCAATGGCATTGAGTGAAATATCTAGAGACTAGAATAAGACAAAAGTTTCTTTTAACCAACTCAGTACATGAAACTTCATTATGATCATTACACTCATCCAAACAATTTACCACTGCATCACAAATCATTTCCCATAAAACCAACCAGCCTCTTTTATTGTTCCCAACTGGAATCATAACTACTGATCTATCGCTAGAAGGTTTTATAACAAAACATTTGAGAATCCAGCCGAAACGATCCATCTTCTTACATAATCAAAAAATTTCAAACTCATTCTTAGCCGAAAGAAATGTGATGTTAATGGACACTGCATAAGGTCAACTAAAGCTTCCTCAAATCAAAGAAGTTTCTTATGATGAGCAACACTGGAGCAAAGACAAGAACCATTTTTTTTCTTAATCGTGAAAAAATCCTAGCCTAAAAGATTTATGAAAAATGCATTATTTCAACCTACAACTGATAGACCTCATATTCTGAATGATCCTTAAGCACAACTTGAATTTTGACCGATAAGAAGGCTAAAAGGGATGAACACTAAGATGGATGAAGGCTAAGAACGGATGAAGGCTAAGGATGGTGAAGAGAATGAACGAAGAAAAAGGAGAGAGCATACATTAGATTCCACTCTTCCTGATGACTTGAATGAATAAATGAAAGTATACATAAGTGAGAATTCCATACATCCCTCATTGCCCTTTTGCTTACAGTTTCATCCTGAATACATTCTATTTGGTTTGGTGTTCCCCTAAAAGTATAGTCGATGGGCTTTATGAGCTTCTCTTAGGCTGGTCTTTATAGAGAAAACAAAGATTTTGTGGTCAAATGCTTGTGAGCTCGTTTGTGGGCGTTATGGAAAAAAAAAAGAAACAGCAGATTATTTTCAGATAAATCTTCCTCAAGCAATTTTTTTCGTTTCTGTTTTTGTGTGTGTGTGTAAGTGTACAGTTTACTGCCTCTAAATGGAGTGTTTTACACAATTCTTTTTGTAATACACAGATGGTGAATGATCATCAATCTAGACGAGGACCTTCTGTTTTTTTGATCCTCCGTTTAGGCTTAGGGAATCCTCATTCCGAAGGCCTTTAGAATGTGTTACTCCTATTTTGTTGAATATTTGATGTCATTGTTTCCTTTATAAAAAGTAGATATTTAATTTAGATAGAACAATAAATTTAACTACCCAAACTGTATTGAATAAATAATTTAATAACTTAATGTCACTACTATTTTTGGGTCATTGCACTATATTTCATAATAAAAGTCTGATTTTCCATCATAAATGAAATTGTAGTGATTAGATGGATGGCATCTTACCGCTACAGTTTGTACCTTACTTTTGTATTTATATTTTCTATTTCTGTTTGTGTACAGAGAGACTTACTGATAATATAGTAAGTTTTACTTCTACCCAACTTGAGATCAGAATTGTTTTTCTTGATGATACAGGTCTTTGAGAAATCCGTGCTGTGCTCATTCTCAACCTTGTATGAGGTATTATTATTATTATTATTATTTTTGGATATATGCCTAATTGTTCTCATTTCCATTGGGCAATCTAATATTGGTTCCTATATAGTTGGTCTATAGTACTTCCTCAAGAGAATGGGCTTGTAGTTGTAGGGGGATGTACTTGTATCATTATTATCTTTTATTTGATGAAAAATGATTTCATTGAATAAATAAATTACAATATAAAAGGATCCCCACTTACATTACTATTATTAATTAGCATTCTCAGGTCAAGTTAAAAAGCAAAAGTCAAATTAAAATTAGCATTCTAAAAGTTTGCCTGGGATGAATTCACAAATGAGAATTAAGGTTTGAAAATTTCATTTCAGTTTGATGATATTTCATATTTGACCTTGTTGTAGTACTTGGATTTGTTTCTTACACGAATTGATGGCTTGAGGCGAAGAATCTCATCTGCTGTTGAGCTTGAGGATGTGTTGGGATATTCGTTGATTAAAGAGACCTTTCAGGTTTCCCATATTTTTTTTTTCCTTGTTCTTAGATTCCATCTCCTGTTTAACTCTTGATCACCAATTTCCTTATATTGAACGTCTCCACCCCTCATATCAACTGCGTTGTTAATATTATTTCTTAAAATATTTCAATATAATAGGGATGTCAACAAAATTCTCTGTGGAGTCCTACTCCAAATGGAGTGGGGATCCTTATTTAGAATAAGGTTAGGATTGGGGATGGAGGAAAAAACTTTCCCTTATTTTTTTCAAGGGAGGGGGACAGGGAGTCACTTACTCCTAACATTTCCATTACATAATTAATACAAATATTAAATATTTTAAAATTTATTTATTTAAAGTAGTGAAAATGTCATTATTTTCATATAAAATTATATAATTTTAATATATTTATTGTTATTTTAATTTAAAAATAACTAAACATCAATATTGAGGCGACCTGGTTTTACGTTATGATCTTTTGTACTTCCATTCATCAAAAAAATTTAAAAGAATTCCAATACCAATTTCTAAGGCTTTTGCTATTGATTCCTGTAAAATCGCTTATCCTTGTGTATGTTCTCCTTATTTATTTATTTAATCAATTTTTTAATCTTATTTTTTAAAAATAAAAAATATAAGATGGTGGTGGAACTATCATCCATCTCAAAGTTCATAATAGGCAGAATTTTTTCTACTAATCATCATTCTTACTCTATTTTAATTCTTCTAAGGTCTCTTACCACATTAGTGCGATGAAGATGATGCAGGATATTTCTACTTCTTTTAATAAGTCAATTTAGATAGACGTTCACTTGAATACTAACGCTTAGTGATTTTATTCATAGCGTGCATCAGATTACTTGTCACCACACCTAAAGAATTCAGAAGATTTAGTGCGTTTGTATGCTTATTGGGCCCGTTTAGAGATAAACTTGGGAAAAGATCTAGTTGCTGCCCGTGGAGTTTGGGAAAGTCTGCTTAAGATCAGGTTTTCTTCATTGCCTTTATGAAACGCACTCTCTTGCTTCCATGCTACCCCATTATGAAACGCTTTTTTTCCCCTCTCTTTTTCCTTTTCTGGAAATCATTTGTTTTCCTGTTGCTGCTTCATTTGCAGTGGCTCGTTATTGGCAGCATGGGAGGGTTACATAGCGATGGAAATCGAGTCAAACCATATAAATAATGCCAGATCCATATATAAGAGATGTTACAGCAAAAGATTTCCAGGGAGTGGTTCAGAGGTAAAATTTCTTCTACTGGGTGACATAATCTTCATTGAAATTCTTTTTCCTTTTCCATTTTTGTTGCAAGTTACATACCTGTCACCAATTGGATAGATACTAATATATCACGGGATTACCCTCTAAAAACTATGGGACTCGAGACCAATACTATGTCCCATAGTTTAACTCATAACACACTTTTTTGGGGTAAAATGTTTAATTTGGAATCAATCCTTTTTCTCATTATCCAATAGTTGATACATTTTGGATTAGATGTTATATTCAGTTTCTTAAAAAAGAAAAAAAAATGTTCAGGATATATGCCATTCATGGTTGCGTTTTGAGAGGGAATTTGGTAGTCTTGAAGATTTCGATCATGCTGCTCGAAAGGTACACTTCTTTTACACTTTGCCAGTTCTGTTGATATTTGATCCATGAAAAGGAAGTGCGTATAACATTTGGAACCTGCTTTTGTTCTTTTCACAATGTTTATTGAAAGTTCAGTTTCTCATTGGTAAAAAAGTCGTTATTTTGAATTTCATTACACCATGGTCTTGGGGTACAATTAATTATTATTATTATTATTATATTTTTTTTGTTGATGTGGAAAGAAAATTCTGAAGTTGAGGACACAAGAAGTACCATGCATAGTAACCAACTGATGTAGTTGGATGAAAATTATCTCATCTGGAGAATTAGTAGTAGTTCCGCAAGTGCTCCCATTGTTATTTATGAAGCTACCAATTCTTCAAATGCTTGTTTCTTCAATGGACCACTAATTTATTCTGCTGGATGATTTCCTTATCTTAGGTTAATCCTCGTCTAGAAGAGTTAAAGTCATATAAGTTACAGATGGATGAGTCAGAAAATCCTGCTAAGCCGAGTGAACATGGTAAGCGAAAATTGGGTGGCGATGCACCCGATGTAGAGTCTCCTGCTAAGAGACTAAAAGATGCTGCACATGGACCAAAGAAGGTTAATGAGAAGGGTAAAGCTCAATTACAAAGCTTAGATGGCCAAACAGGAAACAGCAAAGCAAAAGCTAAAAAACCTGATGATACAAGTGACCAGCAAATGAAAGATTTTGTCCAGGAAAAAGGGAAAGTGTATAATGACCAATGCACTGCATTCGTCTCCAACCTCAACCTCAAGGCAAGTTGTTTCTGAAAGTGCCTATCTGATTTTAATTCACGCTCTGCATTCTCATAGATGACCACATAATTTATGTTGCTTCATTACAACCTGGCAGGCTACTTATGAACACTTGCGGGATTTTTTCCAAGATGTTGGTGGAGTTGTTGCAATTCGAATATTGCATGATAAGTTTACTGGAAAATCACGGGTCCGCTCTCTTCTTCTCTCCACATATTTCCTTTCATTTATTGTCTTGTTATAGTACTTGATGAAAAGTTCTTACTAATTGCATACTGTGATTTTTTTGGCAAGTCCGAATGCTTGCTTCTTATAGTTTGATAGAGGATGGTCGAGAATTGGTTTCCTGTATATTTGTGTGTTTGGAAGGACATAAACGTTTTCCATGGAATACCTATGTACTCGTATTGGGGAAAATACTTAAAATACACTTGTACTGAGAAAAATACTTATATATATATATATATATATATATGGGCATAGAGGAGAACCTAAACTAAAGGAATTTACAATTACAATAAAGATCAACTGTACATAATAACATATATTATAACGCTCCCTCTCAAACTGGAGCAAATATGTCAATTATGCCTGGCTGGTTGCAAAGATGGTTTATTCTTTCTTCATCTAAAGCTTTGATAAGGATATGTCCTAATTGTTCTCCAATCTTCACATATCCTGTAAACACTAACTTTTGTTGTATTTTCTCACAAATGAAATGACAATTCATTTCAATATGTTTAGTCTTCTCATGAAATATTAGATTAGACGCAATGGAAATGCAACTTGATTATCACACTGCAATTTAGTTGGCGTGGTATTACTGAAACCTAAAGTTGATGTATCCACACTATTTCACACACATCCTGTGCTATAGCTCTAATGACTCAACACTTAAACTTGAATCCACATTTTGTTTCTTACTTTTTCAGACACTAACCATTACCCCTTTCCCACCTTCGACTTAAAGTAGTAACCAGCTCACGGCTATAACAAGTGGGTTTGAGCCAGGGGTTACGCCAAGTCCTTCTACTTGGCAAAAAAATAGAAAGAAAGAAAGAAAAACATATGGGAGTATGAAGAGCAAGTCAAATACCCTGCCTGTCAGCGACTTCTATGCTCTTGTTTTCAATAGATAGGATGAAAGCACTATTAGTGCCTTTGTTTATATTAGTTGATGTCTAATTCAAGAAATTGTGTTAGTGAAGGTGGATCAACGTTATACTCTTTGTTATCCCGTGTTTACATTTTAGGCATAATACCGTGACCAAAATTGAAAGAAACAGAAGAAAGAGAGGTAGAAATGAAAAATCATGAAAGAAGGGGAAAACAATGATTTTTGGTAGACAAATGAATTCATGGTAACCATTCCTCTCATTGAGGAAGTATAACTCATAGTAAATGTCCACGATGATTTATGGACGTGGACTATTTTGTTACTCTTCTTTCTCTGCTTAATGTGACCTATTATTTTTACTTTTTGTAGAATCTGAAGTCTTGTACACTTTTTCAGCTTTCCCTGCTAAACTTGTGACTGTACTTCTTATTTTTGGATGTAATTTTATGTATTTCTGTTCTGTAGGTAGTACACTAACTTGTTCATGTGCATTTTTAAGAGTATTTTGATTGAGCTTTAGCCTCCTTACAGGTTGTAAACTGATGGCATGATTTTTTGTTGTAGTACTGATGGATAGAATTCTTATTTGTAGGGACTAGCTTATGTAGATTTCTCTGATGATGCGCATCTCAATGCTGCAGTTGCAAAAAACAAGCAGTTGTTGCTTGGGAAAAAGATAAGCATTGCACGGTCAGATCCTAAGAAAGGTATAACAAAGTAAAGATAAATAAATAAATAAAGATGAAAATTAGATAACATACAATCAAATAGTTAGAACAATCTAACAAAATGTGGTACACTTGGTAAAAAGCCTAAAAGTCTTAATGACATGCCTTAAAATTATTCGACAAGGGTGGGAGAAGCATATGATATGTGAGGGTTTTTCTCAGAACAAAAAAATGGAATGGAAATATATGCTTGTTTACCTTTTAGTATTGGAAATCTTATATCCATTTTATCAGGAAAAATGCTCGGCAATAGTTAAATATGTGGGTATGCTTGTCAATAGTTAAATATTGGATTATGTTGTAGCCTAAATACTCCAGAAATCGTTAAGGGGAAAATCTTTATTAACAAATGGAATTACCATCAATGATGTTTGAATTCAAAGCCTGATTTTTTATTTATAGAGAATAATTGATATTAATGATGCAACCTAAGCGTTCCCCAAAAAATCCTCAAAGGGAAATTTTATTTACAAATGAAATTGATATTAATGATGTGTGCAAACAAAAACAAATCGCTTCTTTATATAGGGGATAGCAAACACTACTCAGTAAAATTCACTACCACCAAAATATTCAACTAAAAGAAAATTACAGTATTATCTATAACAACACTACATCAGCTTCGAAATTATCAGAGGCCATGGCTTAAAATCACTTGAGCTTAGAGTAAAGTTCTCATGCAACAACCTCGTCACTTAAATTAGAAAATGGTTCAATTTATCTGCACTGAATTATTTTTGGATAAGTGGTTCAATTTGCAACCCGTTAGCCGAACTTTTTGCTTCTGAAAATGGTATCTTACTGCTGGCTCATACTGAGACTGAGGATTTGTATGTTTCAGTTGTTTGATTAGTAGAGTATGCACTGTCATCAAATTAGAAAAATTAGATTATGTTCACAACCTTTCTATTTGAATAAAGAAAGTACCTTTCTGTTCATATTTACTCAAAAAGTTTGGATGCATTCTGCTATGGATAATGATGGATTCACCCCTACATTAAATGCATCATCTATCAGTCTCATGGTCAGAACTCATTTGCATGCCAGCTAGAACTCTATTGAACATTCGGGATATTGTTGTAGGAAATTTACAGCTTTATCATGATCTAATCTGTATGCTGTTGGTGGGAATCATAGGGAATGCTTTATTGATAACTTCAATCATAGTAATAGTATATGGTTCTCTGAAATGTCAGATCACGACCAAACTAAACGCTTAGGTCAGGTAGATTGTAATGACATTTGGGATACTGTTGCTGTCTCTCATCAGCTTTATAATTGTCATTATGTAATATCACAAAGTTTGGCATCCCTCTGAATGAGACAAAAGCTAAGAATTCTGTCTCTGATTACCTTCACTTGTAGGGGGAGGCCACACTACGGATCGAGCTAGTGGAGGCAAGACATCCGAGTCAGTAAGTTCTGCAAAGCCTCGGAAAGCCAATGAGCAACCACCTGCTGAGAGGAAGGACGGAGGTAACAAAGTTGAGCTTAAGGGAAAGAACACGTTCGCAGTGCCTAGGAATGTGAGAGCACTTGGTTGGACAGCAGATAAACCAAGGACCGCAGAACAAGAGGATGAGAAGCCAAAAACCAATGATGAATTCAGGAAACTGTATTTTAAAGGCTGAAGCCTTTTGTTGTAAGAATTAGTATGGACTAAAGATTCTGACGTAGATTAGAGTTTCTCCTGATATCACCATACCTCAAGAGGATTTTTGTTTTAAAATGAAATTAATATCTTACTGTGATGTAGAGATAGTTTTGGCATACCATGGTATCCTTTGAATTGGATCTGTTGTATATAGTCAGTTGAGATTTCTTCTATTTAAGATTTATTTTCAGCTTATTTATAAGAACCAGCAGTTAACTGGATGGTGGATAATGTTTGTAGAATAACAATCTCTTCTAATGTTCTTTATATTTTAG

mRNA sequence

AAACCTGCTACGGCGGAGGCACTGCTTCACTTCTGCTCCTTTGCAACACCAGACTGTTCATTTCCGCCTCCTCTACGTCCGACGCCATGGATGCAATCAACGCCCAACTTCCGCTTTCGACCAATTCGGACGACGAAAATTTGGTCAATGGAGATGACCCAATGCCCGACCTTCCCCAGAACCCCACTTCCCCCGCCTCCGATTCTTCTTCCTCCGACTCTGATTCCGAAGTCGACGAATCCGACCAGAAGCTCCAACTCCAGACCCTTCAATCTGAGCTCTCCTCCAACCCTTCCAACTACGATGCCCATGTCCAATATATAAAACTTTTGAGGAAAGTTGGCGACATCGACAACCTGAGGAAAGCAAGGGAAGCAATGAGTGAGATGTTCCCTTTAACCCCTTCAATGTGGCAGGAATGGGCCAAAGACGAAGCGTCTATCAGTACTGGACCAGAGGATGTTGCTGCAATTGAGAGGCTATATGAGCGAGGGGTGTTTGATTATCTGTCAGTTTCTCTTTGGTGTGACTACCTAAATTTTGTTCAAGAATATGATCCAATGGTGCGAGATCGTGCAACTTCTAGAATTAAAAAGGCTAGAGATTTATTTGAACGTGCTCTCACAGCTGCTGGTTTGCATTTTACTGAGGCTGAAAAATTATGGGAAGCATATAGAGAATTTGAGAAATCCATATATCAAAGCATTGACGAAACCGATACTCAGGCGAAAGAAAAACAAGTCCAGCTAATCCGAAGCATTTTCCATCGTCAGTTGTCACTTCCTCTATCTAACATGAATTCAACGCTTGAGGCCTATAAGGCATGGGAGATGGAAGTGAAACAAGGCTGCATTCTTGATGGGAAATCTAATGACTCGGATGGGGTTCCTTCTCAAGTCGCCTCAGCCTATCAAAGAGCATTGGATATGTATAATGCCCGTGTTCAATTCGAAGAACAAATATCAAAACAGGATTTAACTGATACTGAAAGACTTCACCAGTACATTATTTACCTGAAATTTGAACAATCTGCTGGAGATCCCGCAAGGGTACAAGTTCTGTTTGAGCGTGCAGTTGCTGATTTTCCAGTGGTGGTTGATCTGTGGCTTGATTATACCCGTTACATGGACAAAACTTTGAAGGTGAGCAATATTGTGAGGAATGTTTACTCTAGGGCGACTAGGAATTGCCCATGGATAGGTGATCTTTGGGTCCAGTATTTGCTTGCTTTGGAACGTGCTCATGCTTCTGAGGGTGAAATTGCTTCCGTCTTTGAGAAATCCGTGCTGTGCTCATTCTCAACCTTGTATGAGTACTTGGATTTGTTTCTTACACGAATTGATGGCTTGAGGCGAAGAATCTCATCTGCTGTTGAGCTTGAGGATGTGTTGGGATATTCGTTGATTAAAGAGACCTTTCAGCGTGCATCAGATTACTTGTCACCACACCTAAAGAATTCAGAAGATTTAGTGCGTTTGTATGCTTATTGGGCCCGTTTAGAGATAAACTTGGGAAAAGATCTAGTTGCTGCCCGTGGAGTTTGGGAAAGTCTGCTTAAGATCAGTGGCTCGTTATTGGCAGCATGGGAGGGTTACATAGCGATGGAAATCGAGTCAAACCATATAAATAATGCCAGATCCATATATAAGAGATGTTACAGCAAAAGATTTCCAGGGAGTGGTTCAGAGGATATATGCCATTCATGGTTGCGTTTTGAGAGGGAATTTGGTAGTCTTGAAGATTTCGATCATGCTGCTCGAAAGGTTAATCCTCGTCTAGAAGAGTTAAAGTCATATAAGTTACAGATGGATGAGTCAGAAAATCCTGCTAAGCCGAGTGAACATGGTAAGCGAAAATTGGGTGGCGATGCACCCGATGTAGAGTCTCCTGCTAAGAGACTAAAAGATGCTGCACATGGACCAAAGAAGGTTAATGAGAAGGGTAAAGCTCAATTACAAAGCTTAGATGGCCAAACAGGAAACAGCAAAGCAAAAGCTAAAAAACCTGATGATACAAGTGACCAGCAAATGAAAGATTTTGTCCAGGAAAAAGGGAAAGTGTATAATGACCAATGCACTGCATTCGTCTCCAACCTCAACCTCAAGGCTACTTATGAACACTTGCGGGATTTTTTCCAAGATGTTGGTGGAGTTGTTGCAATTCGAATATTGCATGATAAGTTTACTGGAAAATCACGGGGACTAGCTTATGTAGATTTCTCTGATGATGCGCATCTCAATGCTGCAGTTGCAAAAAACAAGCAGTTGTTGCTTGGGAAAAAGATAAGCATTGCACGGTCAGATCCTAAGAAAGGGGGAGGCCACACTACGGATCGAGCTAGTGGAGGCAAGACATCCGAGTCAGTAAGTTCTGCAAAGCCTCGGAAAGCCAATGAGCAACCACCTGCTGAGAGGAAGGACGGAGGTAACAAAGTTGAGCTTAAGGGAAAGAACACGTTCGCAGTGCCTAGGAATGTGAGAGCACTTGGTTGGACAGCAGATAAACCAAGGACCGCAGAACAAGAGGATGAGAAGCCAAAAACCAATGATGAATTCAGGAAACTGTATTTTAAAGGCTGAAGCCTTTTGTTGTAAGAATTAGTATGGACTAAAGATTCTGACGTAGATTAGAGTTTCTCCTGATATCACCATACCTCAAGAGGATTTTTGTTTTAAAATGAAATTAATATCTTACTGTGATGTAGAGATAGTTTTGGCATACCATGGTATCCTTTGAATTGGATCTGTTGTATATAGTCAGTTGAGATTTCTTCTATTTAAGATTTATTTTCAGCTTATTTATAAGAACCAGCAGTTAACTGGATGGTGGATAATGTTTGTAGAATAACAATCTCTTCTAATGTTCTTTATATTTTAG

Coding sequence (CDS)

ATGGATGCAATCAACGCCCAACTTCCGCTTTCGACCAATTCGGACGACGAAAATTTGGTCAATGGAGATGACCCAATGCCCGACCTTCCCCAGAACCCCACTTCCCCCGCCTCCGATTCTTCTTCCTCCGACTCTGATTCCGAAGTCGACGAATCCGACCAGAAGCTCCAACTCCAGACCCTTCAATCTGAGCTCTCCTCCAACCCTTCCAACTACGATGCCCATGTCCAATATATAAAACTTTTGAGGAAAGTTGGCGACATCGACAACCTGAGGAAAGCAAGGGAAGCAATGAGTGAGATGTTCCCTTTAACCCCTTCAATGTGGCAGGAATGGGCCAAAGACGAAGCGTCTATCAGTACTGGACCAGAGGATGTTGCTGCAATTGAGAGGCTATATGAGCGAGGGGTGTTTGATTATCTGTCAGTTTCTCTTTGGTGTGACTACCTAAATTTTGTTCAAGAATATGATCCAATGGTGCGAGATCGTGCAACTTCTAGAATTAAAAAGGCTAGAGATTTATTTGAACGTGCTCTCACAGCTGCTGGTTTGCATTTTACTGAGGCTGAAAAATTATGGGAAGCATATAGAGAATTTGAGAAATCCATATATCAAAGCATTGACGAAACCGATACTCAGGCGAAAGAAAAACAAGTCCAGCTAATCCGAAGCATTTTCCATCGTCAGTTGTCACTTCCTCTATCTAACATGAATTCAACGCTTGAGGCCTATAAGGCATGGGAGATGGAAGTGAAACAAGGCTGCATTCTTGATGGGAAATCTAATGACTCGGATGGGGTTCCTTCTCAAGTCGCCTCAGCCTATCAAAGAGCATTGGATATGTATAATGCCCGTGTTCAATTCGAAGAACAAATATCAAAACAGGATTTAACTGATACTGAAAGACTTCACCAGTACATTATTTACCTGAAATTTGAACAATCTGCTGGAGATCCCGCAAGGGTACAAGTTCTGTTTGAGCGTGCAGTTGCTGATTTTCCAGTGGTGGTTGATCTGTGGCTTGATTATACCCGTTACATGGACAAAACTTTGAAGGTGAGCAATATTGTGAGGAATGTTTACTCTAGGGCGACTAGGAATTGCCCATGGATAGGTGATCTTTGGGTCCAGTATTTGCTTGCTTTGGAACGTGCTCATGCTTCTGAGGGTGAAATTGCTTCCGTCTTTGAGAAATCCGTGCTGTGCTCATTCTCAACCTTGTATGAGTACTTGGATTTGTTTCTTACACGAATTGATGGCTTGAGGCGAAGAATCTCATCTGCTGTTGAGCTTGAGGATGTGTTGGGATATTCGTTGATTAAAGAGACCTTTCAGCGTGCATCAGATTACTTGTCACCACACCTAAAGAATTCAGAAGATTTAGTGCGTTTGTATGCTTATTGGGCCCGTTTAGAGATAAACTTGGGAAAAGATCTAGTTGCTGCCCGTGGAGTTTGGGAAAGTCTGCTTAAGATCAGTGGCTCGTTATTGGCAGCATGGGAGGGTTACATAGCGATGGAAATCGAGTCAAACCATATAAATAATGCCAGATCCATATATAAGAGATGTTACAGCAAAAGATTTCCAGGGAGTGGTTCAGAGGATATATGCCATTCATGGTTGCGTTTTGAGAGGGAATTTGGTAGTCTTGAAGATTTCGATCATGCTGCTCGAAAGGTTAATCCTCGTCTAGAAGAGTTAAAGTCATATAAGTTACAGATGGATGAGTCAGAAAATCCTGCTAAGCCGAGTGAACATGGTAAGCGAAAATTGGGTGGCGATGCACCCGATGTAGAGTCTCCTGCTAAGAGACTAAAAGATGCTGCACATGGACCAAAGAAGGTTAATGAGAAGGGTAAAGCTCAATTACAAAGCTTAGATGGCCAAACAGGAAACAGCAAAGCAAAAGCTAAAAAACCTGATGATACAAGTGACCAGCAAATGAAAGATTTTGTCCAGGAAAAAGGGAAAGTGTATAATGACCAATGCACTGCATTCGTCTCCAACCTCAACCTCAAGGCTACTTATGAACACTTGCGGGATTTTTTCCAAGATGTTGGTGGAGTTGTTGCAATTCGAATATTGCATGATAAGTTTACTGGAAAATCACGGGGACTAGCTTATGTAGATTTCTCTGATGATGCGCATCTCAATGCTGCAGTTGCAAAAAACAAGCAGTTGTTGCTTGGGAAAAAGATAAGCATTGCACGGTCAGATCCTAAGAAAGGGGGAGGCCACACTACGGATCGAGCTAGTGGAGGCAAGACATCCGAGTCAGTAAGTTCTGCAAAGCCTCGGAAAGCCAATGAGCAACCACCTGCTGAGAGGAAGGACGGAGGTAACAAAGTTGAGCTTAAGGGAAAGAACACGTTCGCAGTGCCTAGGAATGTGAGAGCACTTGGTTGGACAGCAGATAAACCAAGGACCGCAGAACAAGAGGATGAGAAGCCAAAAACCAATGATGAATTCAGGAAACTGTATTTTAAAGGCTGA

Protein sequence

MDAINAQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQTLQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASISTGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALTAAGLHFTEAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAYKAWEMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDTERLHQYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRATRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRRISSAVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLVAARGVWESLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFEREFGSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVESPAKRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYNDQCTAFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAAVAKNKQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAKPRKANEQPPAERKDGGNKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG

Homology

[Close]

BLAST of CmoCh06G000060 vs. ExPASy Swiss-Prot
Match: B3DJT0 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Danio rerio OX=7955 GN=sart3 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 8.8e-87
Identity = 233/750 (31.07%), Postives = 360/750 (48.00%), Query Frame = 0


Query: 44  DSDSEVDESDQKLQLQTLQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFP 103
           + D+  DE + + ++Q L+ +LS N  +Y+ HV  IKLLR+ G +  LRKAR+ MSE+FP
Sbjct: 46  EEDTSEDERENEAEIQRLEEQLSINAFDYNCHVDLIKLLRQEGKLHRLRKARQKMSELFP 105

Query: 104 LTPSMWQEWAKDEASISTGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDR 163
           LT  +W +W KDE  I+    D   +  L+ER + DY+   +W +Y+ +      +    
Sbjct: 106 LTEEIWLDWLKDEIRITEDESDREKVYELFERAIKDYVCPEIWLEYVQY-----SIGGMG 165

Query: 164 ATSRIKKARDLFERALTAAGLHFTEAEKLWEAYREFEKSIYQSI--------DETDTQAK 223
           A   I++ R +FERALTA GLH T+   +WEAYREFE  I  ++         +   +  
Sbjct: 166 AQGGIERVRSIFERALTAVGLHMTKGASIWEAYREFEIVILSTVQPPPGTVPSQEQQELL 225

Query: 224 EKQVQLIRSIFHRQLSLPLSNMNSTLEAYKAWEMEVKQGCILDGKSNDSDGVPSQVASAY 283
             Q++ I ++F RQL++PL +M  T   Y  W                 DGVP  V   Y
Sbjct: 226 SAQLERIHTLFRRQLAVPLMDMEGTYAEYSDWA---------------DDGVPETVTHQY 285

Query: 284 QRALDMYNARVQFEEQISKQDLTDTERLHQYIIYLKFEQSAGDPARVQVLFERAVADFPV 343
           +RAL        +EE +    +++  +L +Y  Y+ FE   GDPARVQ++FERA+A+  +
Sbjct: 286 RRALQQMEKGKPYEEALL---VSEPPKLAEYQSYIDFEIKEGDPARVQIIFERALAENCL 345

Query: 344 VVDLWLDYTRYMDKTLKVSNIVRNVYSRATRNCPWIGDLWVQYLLALERAHASEGEIASV 403
           V DLW+ YT Y+D+ LK+ ++V + + RA RNCPW   LW  YLLALER  A    +  V
Sbjct: 346 VPDLWIKYTTYLDRQLKIKDLVLSAHERAVRNCPWTMGLWKSYLLALERHGADHQTVKDV 405

Query: 404 FEKSVLCSFSTLYEYLDLFLTRIDGLRRRISSAVELEDVLGYSLIKETFQRASDYLSPHL 463
           FEK++   F    +Y++++ + +D LRRR+  + E    L    ++  F R+ +YL   +
Sbjct: 406 FEKALNAGFIQATDYVEIWQSYLDYLRRRVDFSKEWSREL--DELRAAFSRSLEYLKQDV 465

Query: 464 K----NSEDL-VRLYAYWARLEINLGKDLVAARGVWESLL-KISGSLLAAWEGYIAMEIE 523
           +     S DL   L   WAR+E    K++  AR +W+S++ K +      W  Y  +E  
Sbjct: 466 EERFSESGDLSCTLMQIWARIEALHCKNMQKARELWDSIMTKGNAKYANMWLEYYNLERS 525

Query: 524 SNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFEREFGSLEDFDHAARKVNPRLEELKS 583
                + R    R  + +      E +C   L FER  GSLED+D A +K   +L  +  
Sbjct: 526 YGDAAHCRKALHR--AVQCTSDYPEHVCDVLLNFERVEGSLEDWDAAVQKTETKLNRVCE 585

Query: 584 YKLQMDESENPAKPSEHGK----RKLGGD---------------------------APDV 643
            + ++ E E      E  K    RK+  D                             + 
Sbjct: 586 QRARVAEKEALHARQEEEKAEQRRKVKADKKAQKKGQKANRTGDKRKAEDDDEEEWGEEA 645

Query: 644 ESPAKRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQ--------QMKD 703
           E P+KRL+        V E+       L G+      K + P    +Q        Q  D
Sbjct: 646 ELPSKRLRGEDDFDSTVTEELMETESGLFGRRAPPARKTEPPGFRKNQQGAPEPQRQPHD 705

Query: 704 FVQEKGKVYNDQCTAFVSNL--NLKATYEHLRDFFQDVGGVVAIRILHDKFTGKS--RGL 737
             +E+ K   D+   FVSNL  N++     LR  FQ  G +  +R +   FT K   RG 
Sbjct: 706 MPKEQRK---DENCVFVSNLTFNMEDPEGKLRTLFQGCGTIQQVRPV---FTAKGTFRGY 762

[Close]

BLAST of CmoCh06G000060 vs. ExPASy Swiss-Prot
Match: Q5REG1 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo abelii OX=9601 GN=SART3 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.5e-82
Identity = 221/758 (29.16%), Postives = 366/758 (48.28%), Query Frame = 0


Query: 37  ASDSSSSDSDSEVDESDQK--LQLQTLQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKA 96
           +++SS  + + E DE ++K  L+++ L+ +LS N  +Y+ HV  I+LLR  G++  +R A
Sbjct: 75  SAESSPGEYEWEYDEEEEKNQLEIERLEEQLSINVYDYNCHVDLIRLLRLEGELTKVRMA 134

Query: 97  REAMSEMFPLTPSMWQEWAKDEASISTGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQ 156
           R+ MSE+FPLT  +W EW  DE S++    D   +  L+E+ V DY+  ++W +Y  +  
Sbjct: 135 RQKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYICPNIWLEYGQY-- 194

Query: 157 EYDPMVRDRATSRIKKARDLFERALTAAGLHFTEAEKLWEAYREFEKSIYQSIDET---- 216
               +        ++K R +FERAL++ GLH T+   LWEAYREFE +I ++        
Sbjct: 195 ---SVGGIGQKGGLEKVRSVFERALSSVGLHMTKGLALWEAYREFESAIVEAARPVAGFL 254

Query: 217 ----DTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAYKAWEMEVKQGCILDGKSNDSDG 276
                 Q  + Q++ + S+F RQL++PL +M +T   Y+ W                 D 
Sbjct: 255 SPFDREQTFDSQLEKVHSLFRRQLAIPLYDMEATFAEYEEW---------------SEDP 314

Query: 277 VPSQVASAYQRALDMYNARVQFEEQISKQDLTDTERLHQYIIYLKFEQSAGDPARVQVLF 336
           +P  V   Y +AL        +EE + +    +  RL +Y  Y+ FE   GDPAR+Q++F
Sbjct: 315 IPESVIQNYNKALQQLEKYKPYEEALLQ---AEAPRLAEYQAYIDFEMKIGDPARIQLIF 374

Query: 337 ERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRATRNCPWIGDLWVQYLLALERAH 396
           ERA+ +  +V DLW+ Y++Y+D+ LKV ++V +V++RA RNCPW   LW +YLLA+ER  
Sbjct: 375 ERALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTVALWSRYLLAMERHG 434

Query: 397 ASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRRI----SSAVELEDVLGYSLIKE 456
                I+  FEK++   F    +Y++++   +D LRRR+     S+ ELE+      ++ 
Sbjct: 435 VDHQVISVTFEKALNAGFIQATDYVEIWQAYLDYLRRRVDFKQDSSKELEE------LRA 494

Query: 457 TFQRASDYLSPHL-----KNSEDLVRLYAYWARLEINLGKDLVAARGVWESLLKISGSLL 516
            F RA +YL   +     ++ +    +   WAR+E  L  ++  AR +W+S++    +  
Sbjct: 495 AFTRALEYLKQEVEERFNESGDPSCVIMQNWARIEARLCNNMQKARELWDSIMTRGNAKY 554

Query: 517 A-AWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFEREFGSLEDFDHA 576
           A  W  Y  +E       + R    R  + +      E +C   L  ER  GSLED+D A
Sbjct: 555 ANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPEHVCEVLLTMERTEGSLEDWDIA 614

Query: 577 ARKVNPRLEELKSYKLQMDESENPAKPSE-----------------------HGKRKLGG 636
            +K   RL  +   +++  E E      E                        G  K G 
Sbjct: 615 VQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKRARAEKKALKKKKKIRGPEKRGA 674

Query: 637 DAPD--------VESPAKRLKDAAHGPKKVNEKGKAQ-LQSLDGQTGNSKAKAKKPDDTS 696
           D  D         E P+KR +        +   G+ Q ++   G  G   A   +P    
Sbjct: 675 DEDDEKEWGDDEEEQPSKRRR----VENSIPAAGETQNVEVAPGPAGKCAAVDVEPPSKQ 734

Query: 697 DQQMKDFVQEKGKVYN----DQCTAFVSNL--NLKATYEHLRDFFQDVGGVVAIRILHDK 737
            ++     ++  KV +    D  T FVSNL  +++     LR  F+  G VV IR +   
Sbjct: 735 KEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDAKLRPLFEACGEVVQIRPIFSN 794

[Close]

BLAST of CmoCh06G000060 vs. ExPASy Swiss-Prot
Match: Q9JLI8 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus OX=10090 GN=Sart3 PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.1e-81
Identity = 215/751 (28.63%), Postives = 371/751 (49.40%), Query Frame = 0


Query: 31  QNPTSPASDSSSSDSDSEVDESDQK--LQLQTLQSELSSNPSNYDAHVQYIKLLRKVGDI 90
           ++  + +++SS+ + + E DE ++K  L+++ L+ +LS N  +Y+ HV+ I+LLR  G++
Sbjct: 70  EDAMASSAESSAGEDEWEYDEEEEKNQLEIERLEEQLSINGYDYNCHVELIRLLRLEGEL 129

Query: 91  DNLRKAREAMSEMFPLTPSMWQEWAKDEASISTGPEDVAAIERLYERGVFDYLSVSLWCD 150
             +R AR+ MSE+FPLT  +W EW  DE S++    D   +  L+ER V DY+  ++W +
Sbjct: 130 SRVRAARQKMSELFPLTEELWLEWLHDEISMAMDGLDREHVYELFERAVKDYICPNIWLE 189

Query: 151 YLNFVQEYDPMVRDRATSRIKKARDLFERALTAAGLHFTEAEKLWEAYREFEKSIYQSID 210
           Y  +      +        ++K R +FERAL++ GLH T+   +WEAYREFE +I ++  
Sbjct: 190 YGQY-----SVGGIGQKGGLEKVRSVFERALSSVGLHMTKGLAIWEAYREFESAIVEA-- 249

Query: 211 ETDTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAYKAWEMEVKQGCILDGKSNDSDGVP 270
                    +++ + S+F RQL++PL  M +T   Y+ W  E                +P
Sbjct: 250 --------ARLEKVHSLFRRQLAIPLYEMEATFAEYEEWSEE---------------PMP 309

Query: 271 SQVASAYQRALDMYNARVQFEEQISKQDLTDTERLHQYIIYLKFEQSAGDPARVQVLFER 330
             V  +YQ+AL        +EE + +    +  RL +Y  Y+ FE   GDPAR+Q++FER
Sbjct: 310 ESVLQSYQKALGQLEKYKPYEEALLQ---AEAPRLAEYQAYIDFEMKIGDPARIQLIFER 369

Query: 331 AVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRATRNCPWIGDLWVQYLLALERAHAS 390
           A+ +  +V DLW+ Y++Y+D+ LKV ++V +V+SRA RNCPW   LW +YLLA+ER    
Sbjct: 370 ALVENCLVPDLWIRYSQYLDRQLKVKDLVLSVHSRAVRNCPWTVALWSRYLLAMERHGLD 429

Query: 391 EGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRRI----SSAVELEDVLGYSLIKETF 450
              I++ FE ++   F    +Y++++   +D LRRR+     S+ ELE+      ++  F
Sbjct: 430 HQTISATFENALSAGFIQATDYVEIWQVYLDYLRRRVDFRQDSSKELEE------LRSMF 489

Query: 451 QRASDYLSPHL-----KNSEDLVRLYAYWARLEINLGKDLVAARGVWESLLKISGSLLA- 510
            RA +YL   +     ++ +    +   WAR+E  L  ++  AR +W+S++    +  A 
Sbjct: 490 TRALEYLQQEVEERFSESGDPSCLIMQSWARVEARLCNNMQKARELWDSIMTRGNAKYAN 549

Query: 511 AWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFEREFGSLEDFDHAAR 570
            W  Y  +E       + R    R  + +      E +C   L  ER  G+LED+D A +
Sbjct: 550 MWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPEHVCEVLLTMERTEGTLEDWDLAIQ 609

Query: 571 KVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVESPAKRLKDAAHGPKK---- 630
           K   RL  +   +++  E E      E  K +        +   K+ K      K+    
Sbjct: 610 KTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKKVRAEKKALKKKKKTRGADKRREDE 669

Query: 631 --VNEKGK------AQLQSLDGQTGNSKAKAKK---------------PDDTSDQQMKDF 690
              NE G+      ++ +  +    + +A A K               P     ++    
Sbjct: 670 DEENEWGEEEEEQPSKRRRTENSLASGEASAMKEETELSGKCLTIDVGPPSKQKEKAASL 729

Query: 691 VQEKGKVYN----DQCTAFVSNL--NLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRG 737
            ++  KV +    D  T FVSNL  +++     LR  F+  G VV IR +     G  RG
Sbjct: 730 KRDMPKVAHDSSKDSVTVFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRPIFSN-RGDFRG 778

[Close]

BLAST of CmoCh06G000060 vs. ExPASy Swiss-Prot
Match: Q15020 (Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo sapiens OX=9606 GN=SART3 PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.9e-81
Identity = 219/750 (29.20%), Postives = 364/750 (48.53%), Query Frame = 0


Query: 37  ASDSSSSDSDSEVDESDQK--LQLQTLQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKA 96
           +++SS  + + E DE ++K  L+++ L+ +LS N  +Y+ HV  I+LLR  G++  +R A
Sbjct: 75  SAESSPGEYEWEYDEEEEKNQLEIERLEEQLSINVYDYNCHVDLIRLLRLEGELTKVRMA 134

Query: 97  REAMSEMFPLTPSMWQEWAKDEASISTGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQ 156
           R+ MSE+FPLT  +W EW  DE S++    D   +  L+E+ V DY+  ++W +Y  +  
Sbjct: 135 RQKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYICPNIWLEYGQY-- 194

Query: 157 EYDPMVRDRATSRIKKARDLFERALTAAGLHFTEAEKLWEAYREFEKSIYQSIDETDTQA 216
               +        ++K R +FERAL++ GLH T+   LWEAYREFE +I ++        
Sbjct: 195 ---SVGGIGQKGGLEKVRSVFERALSSVGLHMTKGLALWEAYREFESAIVEA-------- 254

Query: 217 KEKQVQLIRSIFHRQLSLPLSNMNSTLEAYKAWEMEVKQGCILDGKSNDSDGVPSQVASA 276
              +++ + S+F RQL++PL +M +T   Y+ W                 D +P  V   
Sbjct: 255 --ARLEKVHSLFRRQLAIPLYDMEATFAEYEEW---------------SEDPIPESVIQN 314

Query: 277 YQRALDMYNARVQFEEQISKQDLTDTERLHQYIIYLKFEQSAGDPARVQVLFERAVADFP 336
           Y +AL        +EE + +    +  RL +Y  Y+ FE   GDPAR+Q++FERA+ +  
Sbjct: 315 YNKALQQLEKYKPYEEALLQ---AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENC 374

Query: 337 VVVDLWLDYTRYMDKTLKVSNIVRNVYSRATRNCPWIGDLWVQYLLALERAHASEGEIAS 396
           +V DLW+ Y++Y+D+ LKV ++V +V++RA RNCPW   LW +YLLA+ER       I+ 
Sbjct: 375 LVPDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISV 434

Query: 397 VFEKSVLCSFSTLYEYLDLFLTRIDGLRRRI----SSAVELEDVLGYSLIKETFQRASDY 456
            FEK++   F    +Y++++   +D LRRR+     S+ ELE+      ++  F RA +Y
Sbjct: 435 TFEKALNAGFIQATDYVEIWQAYLDYLRRRVDFKQDSSKELEE------LRAAFTRALEY 494

Query: 457 LSPHL-----KNSEDLVRLYAYWARLEINLGKDLVAARGVWESLLKISGSLLA-AWEGYI 516
           L   +     ++ +    +   WAR+E  L  ++  AR +W+S++    +  A  W  Y 
Sbjct: 495 LKQEVEERFNESGDPSCVIMQNWARIEARLCNNMQKARELWDSIMTRGNAKYANMWLEYY 554

Query: 517 AMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFEREFGSLEDFDHAARKVNPRL 576
            +E       + R    R  + +      E +C   L  ER  GSLED+D A +K   RL
Sbjct: 555 NLERAHGDTQHCRKALHR--AVQCTSDYPEHVCEVLLTMERTEGSLEDWDIAVQKTETRL 614

Query: 577 EELKSYKLQMDESENPAKPSE-----------------------HGKRKLGGDAPD---- 636
             +   +++  E E      E                        G  K G D  D    
Sbjct: 615 ARVNEQRMKAAEKEAALVQQEEEKAEQRKRARAEKKALKKKKKIRGPEKRGADEDDEKEW 674

Query: 637 ----VESPAKRLKDAAHGPKKVNEKGKAQ-LQSLDGQTGNSKAKAKKPDDTSDQQMKDFV 696
                E P+KR +        +   G+ Q ++   G  G   A   +P     ++     
Sbjct: 675 GDDEEEQPSKRRR----VENSIPAAGETQNVEVAAGPAGKCAAVDVEPPSKQKEKAASLK 734

Query: 697 QEKGKVYN----DQCTAFVSNL--NLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGL 737
           ++  KV +    D  T FVSNL  +++     LR  F+  G VV IR +     G  RG 
Sbjct: 735 RDMPKVLHDSSKDSITVFVSNLPYSMQEPDTKLRPLFEACGEVVQIRPIFSN-RGDFRGY 778

[Close]

BLAST of CmoCh06G000060 vs. ExPASy Swiss-Prot
Match: Q9USY2 (Uncharacterized RNA-binding protein C1861.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1861.04c PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-34
Identity = 158/729 (21.67%), Postives = 291/729 (39.92%), Query Frame = 0


Query: 35  SPASDSSSSDSDSEVDESDQKLQLQTLQSELSS----NPSNYDAHVQYIKLLRKVGDIDN 94
           S   D    + + ++D  +Q  +   L  EL+     +P NYD+H++ I+ L+++     
Sbjct: 2   SQIQDLKDENVEMDIDPQEQNEKKPLLLDELTKFTILHPYNYDSHIKLIEELKRLDKKKE 61

Query: 95  LRKAREAMSEMFPLTPSMWQEWAKDEASISTGPEDVAAIERLYERGVFDYLSVSLWCDYL 154
           L +AR+    +FPL+  +W ++  DE       +D   I+ L++  V DYLS+ +WC YL
Sbjct: 62  LSEARKTFQSIFPLSEDLWVDYLLDECKNCRTLDDYVRIKTLFDLAVQDYLSIKIWCMYL 121

Query: 155 NF-VQEYDPMVRDRATSRIK------KARDLFERALTAAGLHFTEAEKLWEAYREFEKSI 214
            F +   D    ++  S +        A  LFERA      HF++++ +W  Y EF ++ 
Sbjct: 122 EFTLNLMDTSSFEQEQSELNGVITLTDAHSLFERAYQTCKFHFSKSQCVWTLYLEFLQTF 181

Query: 215 YQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAYKAWEMEVKQGCILDGKSND 274
             ++ E + + +      I      +L LP   +  T  +   +                
Sbjct: 182 GDALFEGEEEQEIVFKNKIYDFHIDRLKLPHEQIEETFTSLSTFV--------------T 241

Query: 275 SDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDTERLHQYIIYL-----KFEQSAGD 334
           ++  PS+      ++  +Y   ++   +I  ++L      H    Y+     +  +S  +
Sbjct: 242 NNWSPSEYEDVMVKSNKVYETTLKRNAKIFNKELLLNSANHSLEAYMDLINDESRRSTAE 301

Query: 335 PARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRATRNCPWIGDLWVQY 394
              +  L+ERA+  +P++ +LWL YT ++ K    S+   +V  RATRNC WIG +W   
Sbjct: 302 LQYITTLYERAIVLYPLIPELWLQYTAWLSKVDFSSSQASSVAERATRNCSWIGRIWSIK 361

Query: 395 LLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRRISSAVELEDVLGYS 454
           L  +  + AS    ++V E+   C  S L    D  +    G  +        ED     
Sbjct: 362 LTYMTLSGAS---TSAVCEEKDRCLNSNLLVNFDEVIDFFSGFLKACLYLSSNED-KPQE 421

Query: 455 LIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGK--------DLVAARGVWESLL 514
            +K    +  DYL  + K S+D        AR+ I L K        D  +    W  + 
Sbjct: 422 FLKHQIHKVEDYLRKNHKGSKD--------ARMRIELSKIYLYSEISDFESVEKCWSDMF 481

Query: 515 KISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFEREFGSL 574
               +    W       ++ N    A ++ K  Y        + D      +F +    L
Sbjct: 482 HDFQNQALYWISRYISTMKYNPELAAETLKKSLYK-------NVDQPQLLFQFYQSIMDL 541

Query: 575 ED--FDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVESPAKRLKDA 634
            +  F + +   +    +  S+K Q+D      K +      L    P  +  A      
Sbjct: 542 NNDCFTNTSHLYDVLNAQRISFKRQLDSFAEETKQTVENTEPL--KVPQADDTA------ 601

Query: 635 AHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSD--QQMKDFVQEKGKVYNDQCTAF 694
                                   + +K +KP    D  ++ K   Q + +   ++ T  
Sbjct: 602 ------------------------ALSKKRKPGQEGDVFKKSKPIEQHRNR---EELTVL 660

Query: 695 VSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAAVAKNKQ 736
           V+NL    +   L+ FF+D G ++ I IL D    K   +A ++FS+ + + AA  ++ +
Sbjct: 662 VTNLPSDISENELKIFFKDCGNIIRIFILED--NQKDVKVAQIEFSETSEVLAAKTRDLK 660

[Close]

BLAST of CmoCh06G000060 vs. ExPASy TrEMBL
Match: A0A6J1FHD1 (squamous cell carcinoma antigen recognized by T-cells 3 OS=Cucurbita moschata OX=3662 GN=LOC111445777 PE=4 SV=1)

HSP 1 Score: 1632.8 bits (4227), Expect = 0.0e+00
Identity = 830/830 (100.00%), Postives = 830/830 (100.00%), Query Frame = 0


Query: 1   MDAINAQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQT 60
           MDAINAQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQT
Sbjct: 1   MDAINAQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQT 60

Query: 61  LQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASIS 120
           LQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASIS
Sbjct: 61  LQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASIS 120

Query: 121 TGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALT 180
           TGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALT
Sbjct: 121 TGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALT 180

Query: 181 AAGLHFTEAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNST 240
           AAGLHFTEAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNST
Sbjct: 181 AAGLHFTEAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNST 240

Query: 241 LEAYKAWEMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDT 300
           LEAYKAWEMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDT
Sbjct: 241 LEAYKAWEMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDT 300

Query: 301 ERLHQYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNV 360
           ERLHQYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNV
Sbjct: 301 ERLHQYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNV 360

Query: 361 YSRATRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDG 420
           YSRATRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDG
Sbjct: 361 YSRATRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDG 420

Query: 421 LRRRISSAVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLV 480
           LRRRISSAVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLV
Sbjct: 421 LRRRISSAVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLV 480

Query: 481 AARGVWESLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSW 540
           AARGVWESLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSW
Sbjct: 481 AARGVWESLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSW 540

Query: 541 LRFEREFGSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVES 600
           LRFEREFGSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVES
Sbjct: 541 LRFEREFGSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVES 600

Query: 601 PAKRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYN 660
           PAKRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYN
Sbjct: 601 PAKRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYN 660

Query: 661 DQCTAFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAA 720
           DQCTAFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAA
Sbjct: 661 DQCTAFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAA 720

Query: 721 VAKNKQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAKPRKANEQPPAERKDGG 780
           VAKNKQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAKPRKANEQPPAERKDGG
Sbjct: 721 VAKNKQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAKPRKANEQPPAERKDGG 780

Query: 781 NKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG 831
           NKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG
Sbjct: 781 NKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG 830

[Close]

BLAST of CmoCh06G000060 vs. ExPASy TrEMBL
Match: A0A6J1I352 (squamous cell carcinoma antigen recognized by T-cells 3 OS=Cucurbita maxima OX=3661 GN=LOC111470118 PE=4 SV=1)

HSP 1 Score: 1605.1 bits (4155), Expect = 0.0e+00
Identity = 818/830 (98.55%), Postives = 821/830 (98.92%), Query Frame = 0


Query: 1   MDAINAQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQT 60
           MDAIN QLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQT
Sbjct: 1   MDAINDQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQT 60

Query: 61  LQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASIS 120
           LQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASIS
Sbjct: 61  LQSELSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASIS 120

Query: 121 TGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALT 180
           TGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKK RDLFERALT
Sbjct: 121 TGPEDVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKVRDLFERALT 180

Query: 181 AAGLHFTEAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNST 240
           AAGLHFTEAE LWEAYREFEKSIYQSIDETD+QAKEKQVQLIRSIFHRQLSLPLSNMNST
Sbjct: 181 AAGLHFTEAETLWEAYREFEKSIYQSIDETDSQAKEKQVQLIRSIFHRQLSLPLSNMNST 240

Query: 241 LEAYKAWEMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDT 300
           LEAYKAWEMEVKQGCILDGKSNDSDGVPSQVAS YQRALDMYNARVQFEEQISKQ+LTDT
Sbjct: 241 LEAYKAWEMEVKQGCILDGKSNDSDGVPSQVASTYQRALDMYNARVQFEEQISKQELTDT 300

Query: 301 ERLHQYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNV 360
           ERLHQYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNV
Sbjct: 301 ERLHQYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNV 360

Query: 361 YSRATRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDG 420
           YSRATRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDG
Sbjct: 361 YSRATRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDG 420

Query: 421 LRRRISSAVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLV 480
           LRRRISSAV+LEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLV
Sbjct: 421 LRRRISSAVDLEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLV 480

Query: 481 AARGVWESLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSW 540
           AARGVWESLLKISGSLLAAWEGYIAMEIESNHI NARSIYKRCYSKRFPGSGSEDICHSW
Sbjct: 481 AARGVWESLLKISGSLLAAWEGYIAMEIESNHITNARSIYKRCYSKRFPGSGSEDICHSW 540

Query: 541 LRFEREFGSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVES 600
           LRFEREFGSLEDFDHAARKVNPRLEELKSYK QMDESENPAKPSEHGKRKLGGDAPDVES
Sbjct: 541 LRFEREFGSLEDFDHAARKVNPRLEELKSYKFQMDESENPAKPSEHGKRKLGGDAPDVES 600

Query: 601 PAKRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYN 660
            AKRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYN
Sbjct: 601 SAKRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYN 660

Query: 661 DQCTAFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAA 720
           DQCTAFVSNLN KATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAA
Sbjct: 661 DQCTAFVSNLNPKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAA 720

Query: 721 VAKNKQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAKPRKANEQPPAERKDGG 780
           VAKNKQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAKPRKANEQPPAER DGG
Sbjct: 721 VAKNKQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAKPRKANEQPPAER-DGG 780

Query: 781 NKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG 831
           NKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG
Sbjct: 781 NKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG 829

[Close]

BLAST of CmoCh06G000060 vs. ExPASy TrEMBL
Match: A0A1S3CCC2 (squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499370 PE=4 SV=1)

HSP 1 Score: 1380.5 bits (3572), Expect = 0.0e+00
Identity = 704/827 (85.13%), Postives = 754/827 (91.17%), Query Frame = 0


Query: 5   NAQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQTLQSE 64
           NA+ PL TNSD  N VNGD+PMPDLPQNP    SDSSSSDSDSE DES+Q LQL +LQS+
Sbjct: 8   NAETPLPTNSDQGNSVNGDEPMPDLPQNP----SDSSSSDSDSEDDESNQNLQLHSLQSQ 67

Query: 65  LSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASISTGPE 124
           LSSN S+YDAHVQYIKLLRKVGDIDNLRKAREAMSE+FPL+PSMWQEWAKDEASI+TGPE
Sbjct: 68  LSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINTGPE 127

Query: 125 DVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALTAAGL 184
            +AAIERLYERGVFDYLSVSLW DYLNF++EYDP+V+D ATS IKK RDLFERALTAAGL
Sbjct: 128 ALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGL 187

Query: 185 HFTEAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAY 244
           HFTEAEKLWEAYR+FEK+IYQ+I ETD QAKEKQ+QLIRSIFHRQLSLPLSNM+STLE Y
Sbjct: 188 HFTEAEKLWEAYRDFEKAIYQTIAETDAQAKEKQIQLIRSIFHRQLSLPLSNMSSTLETY 247

Query: 245 KAWEMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDTERLH 304
           KAWE+EVKQGC LD +SN SDGVP+ VAS Y+RALDMYNARVQ E+QISKQDLTDTERLH
Sbjct: 248 KAWELEVKQGCALDTESNYSDGVPTLVASTYRRALDMYNARVQLEDQISKQDLTDTERLH 307

Query: 305 QYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRA 364
           QYIIYLKFEQSAGDPARVQVLFERA+ADFPV VDLWLDYT Y+DKTLKV NIVRNVYSRA
Sbjct: 308 QYIIYLKFEQSAGDPARVQVLFERAIADFPVSVDLWLDYTCYIDKTLKVGNIVRNVYSRA 367

Query: 365 TRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRR 424
           TRNCPWIGDLWV+YLLALER+HASEGEIASVFEKS+ CSFSTL EYLDLFLTRIDGLRRR
Sbjct: 368 TRNCPWIGDLWVRYLLALERSHASEGEIASVFEKSLQCSFSTLDEYLDLFLTRIDGLRRR 427

Query: 425 ISSAVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLVAARG 484
           ISS V+LED L YSLIKETFQRASDYLSP LKNSE LVRLYAYWARLEINLGKDL +ARG
Sbjct: 428 ISSGVQLEDALEYSLIKETFQRASDYLSPQLKNSEVLVRLYAYWARLEINLGKDLDSARG 487

Query: 485 VWESLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFE 544
           VWESLLKI GSLLAAWEGYIAME+E NHINNARSIYKRCYSKRF GSGSEDICHSWLRFE
Sbjct: 488 VWESLLKICGSLLAAWEGYIAMEVELNHINNARSIYKRCYSKRFTGSGSEDICHSWLRFE 547

Query: 545 REFGSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVESPAKR 604
           REFGSLEDFDHA RKVNPRLEELKSYKLQ+D+SENP K S+H KRKLGGDAP+VESPAK+
Sbjct: 548 REFGSLEDFDHAVRKVNPRLEELKSYKLQIDDSENPVKQSDHSKRKLGGDAPNVESPAKK 607

Query: 605 LKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYNDQCT 664
           LKD+AHGPKKV EKGKAQLQ+LD QTG+ + + KKPDD+SDQQM D VQ KGKVYNDQCT
Sbjct: 608 LKDSAHGPKKVTEKGKAQLQNLDDQTGDIRGRVKKPDDSSDQQMNDSVQGKGKVYNDQCT 667

Query: 665 AFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAAVAKN 724
           AF+SNLNLK TY+HLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHL A VAKN
Sbjct: 668 AFISNLNLKVTYDHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLEAGVAKN 727

Query: 725 KQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAK-PRKANEQPPAERKDGGNKV 784
           KQLLLGKKISIARSDPK+ GGH  DRA GGK  ES SS+K P K NEQP   RK GGN V
Sbjct: 728 KQLLLGKKISIARSDPKR-GGHGMDRAGGGKRFESRSSSKEPHKVNEQPSGLRKHGGNSV 787

Query: 785 ELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG 831
           ELKGKNTFAVPRNVRALGWTADKP+T EQ+DE PK+NDEFRKLYFKG
Sbjct: 788 ELKGKNTFAVPRNVRALGWTADKPKTLEQDDENPKSNDEFRKLYFKG 829

[Close]

BLAST of CmoCh06G000060 vs. ExPASy TrEMBL
Match: A0A5D3CUH2 (Squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001220 PE=4 SV=1)

HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 638/773 (82.54%), Postives = 684/773 (88.49%), Query Frame = 0


Query: 5   NAQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQTLQSE 64
           NA+ PL TNSD  N VNGD+PMPDLPQNP    SDSSSSDSDSE DES+Q LQL +LQS+
Sbjct: 8   NAETPLPTNSDQGNSVNGDEPMPDLPQNP----SDSSSSDSDSEDDESNQNLQLHSLQSQ 67

Query: 65  LSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASISTGPE 124
           LSSN S+YDAHVQYIKLLRKVGDIDNLRKAREAMSE+FPL+PSMWQEWAKDEASI+TGPE
Sbjct: 68  LSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINTGPE 127

Query: 125 DVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALTAAGL 184
            +AAIERLYERGVFDYLSVSLW DYLNF++EYDP+V+D ATS IKK RDLFERALTAAGL
Sbjct: 128 ALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGL 187

Query: 185 HFTEAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAY 244
           HFTEAEKLWEAYR+FEK+IYQ+I ETD QAKEKQ+QLIRSIFHRQLSLPLSNM+STLE Y
Sbjct: 188 HFTEAEKLWEAYRDFEKAIYQTIAETDAQAKEKQIQLIRSIFHRQLSLPLSNMSSTLETY 247

Query: 245 KAWEMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDTERLH 304
           KAWE+EVKQGC LD +SN SDGVP+ VAS Y+RALDMYNARVQ E+QISKQDLTDTERLH
Sbjct: 248 KAWELEVKQGCALDTESNYSDGVPTLVASTYRRALDMYNARVQLEDQISKQDLTDTERLH 307

Query: 305 QYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRA 364
           QYIIYLKFEQSAGDPARVQVLFERA+ADFPV VDLWLDYT Y+DKTLKV NIVRNVYSRA
Sbjct: 308 QYIIYLKFEQSAGDPARVQVLFERAIADFPVSVDLWLDYTCYIDKTLKVGNIVRNVYSRA 367

Query: 365 TRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRR 424
           TRNCPWIGDLWV+YLLALER+HASEGEIASVFEKS+ CSFSTL EYLDLFLTRIDGLRRR
Sbjct: 368 TRNCPWIGDLWVRYLLALERSHASEGEIASVFEKSLQCSFSTLDEYLDLFLTRIDGLRRR 427

Query: 425 ISSAVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLVAARG 484
           ISS V+LED L YSLIKETFQRASDYLSP LKNSE LVRLYAYWARLEINLGKDL +ARG
Sbjct: 428 ISSGVQLEDALEYSLIKETFQRASDYLSPQLKNSEVLVRLYAYWARLEINLGKDLDSARG 487

Query: 485 VWESLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFE 544
           VWESLLKI GSLLAAWEGYIAME+E NHINNARSIYKRCYSKRF GSGSEDICHSWLRFE
Sbjct: 488 VWESLLKICGSLLAAWEGYIAMEVELNHINNARSIYKRCYSKRFTGSGSEDICHSWLRFE 547

Query: 545 REFGSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVESPAKR 604
           REFGSLEDFDHA RKVNPRLEELKSYKLQ+D+SENP K S+H KRKLGGDAP+VESPAK+
Sbjct: 548 REFGSLEDFDHAVRKVNPRLEELKSYKLQIDDSENPVKQSDHSKRKLGGDAPNVESPAKK 607

Query: 605 LKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYNDQCT 664
           LKD+AHGPKKV EKGKAQLQ+LD QTG+ + + KKPDD+SDQQM D VQ KGKVYNDQCT
Sbjct: 608 LKDSAHGPKKVTEKGKAQLQNLDDQTGDIRGRVKKPDDSSDQQMNDSVQGKGKVYNDQCT 667

Query: 665 AFVSNLNLKA----------------------------------TYEHLRDFFQDVGGVV 724
           AF+SNLNLKA                                  TY+HLRDFFQDVGGVV
Sbjct: 668 AFISNLNLKASYYQSAFYFNSLSGVCIFVDEHIAYAASSQLWQVTYDHLRDFFQDVGGVV 727

Query: 725 AIRILHDKFTGKSRGLAYVDFSDDAHLNAAVAKNKQLLLGKKISIARSDPKKG 744
           AIRILHDKFTGKSRGLAYVDFSDDAHL A VAKNKQLLLGKKISIARSDPK+G
Sbjct: 728 AIRILHDKFTGKSRGLAYVDFSDDAHLEAGVAKNKQLLLGKKISIARSDPKRG 776

[Close]

BLAST of CmoCh06G000060 vs. ExPASy TrEMBL
Match: A0A1S4E2W5 (squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499370 PE=4 SV=1)

HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 623/827 (75.33%), Postives = 671/827 (81.14%), Query Frame = 0


Query: 5   NAQLPLSTNSDDENLVNGDDPMPDLPQNPTSPASDSSSSDSDSEVDESDQKLQLQTLQSE 64
           NA+ PL TNSD  N VNGD+PMPDLPQNP    SDSSSSDSDSE DES+Q LQL +LQS+
Sbjct: 8   NAETPLPTNSDQGNSVNGDEPMPDLPQNP----SDSSSSDSDSEDDESNQNLQLHSLQSQ 67

Query: 65  LSSNPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASISTGPE 124
           LSSN S+YDAHVQYIKLLRKVGDIDNLRKAREAMSE+FPL+PSMWQEWAKDEASI+TGPE
Sbjct: 68  LSSNASDYDAHVQYIKLLRKVGDIDNLRKAREAMSEIFPLSPSMWQEWAKDEASINTGPE 127

Query: 125 DVAAIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALTAAGL 184
            +AAIERLYERGVFDYLSVSLW DYLNF++EYDP+V+D ATS IKK RDLFERALTAAGL
Sbjct: 128 ALAAIERLYERGVFDYLSVSLWLDYLNFIREYDPLVQDCATSGIKKVRDLFERALTAAGL 187

Query: 185 HFTEAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAY 244
           HFTEAEKLWEAYR+FEK+IYQ+I ETD QAKEKQ+QLIRSIFHRQLSLPLSNM+STLE Y
Sbjct: 188 HFTEAEKLWEAYRDFEKAIYQTIAETDAQAKEKQIQLIRSIFHRQLSLPLSNMSSTLETY 247

Query: 245 KAWEMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDTERLH 304
           KAWE+EVKQGC LD +SN SDGVP+ VAS Y+RALDMYNARVQ E+QISKQDLTDTERLH
Sbjct: 248 KAWELEVKQGCALDTESNYSDGVPTLVASTYRRALDMYNARVQLEDQISKQDLTDTERLH 307

Query: 305 QYIIYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRA 364
           QYIIYLKFEQSAGDPARVQVLFERA+ADFPV VDLWLDYT Y+DKTLKV NIVRNVYSRA
Sbjct: 308 QYIIYLKFEQSAGDPARVQVLFERAIADFPVSVDLWLDYTCYIDKTLKVGNIVRNVYSRA 367

Query: 365 TRNCPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRR 424
           TRNCPWIGDLWV+YLLALER+HASEGEIASVFEKS+ CSFSTL EYLDLFLTRIDGLRRR
Sbjct: 368 TRNCPWIGDLWVRYLLALERSHASEGEIASVFEKSLQCSFSTLDEYLDLFLTRIDGLRRR 427

Query: 425 ISSAVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLVAARG 484
           ISS V+LED L YSLIKETFQ                                       
Sbjct: 428 ISSGVQLEDALEYSLIKETFQ--------------------------------------- 487

Query: 485 VWESLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFE 544
                                                             DICHSWLRFE
Sbjct: 488 --------------------------------------------------DICHSWLRFE 547

Query: 545 REFGSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPSEHGKRKLGGDAPDVESPAKR 604
           REFGSLEDFDHA RKVNPRLEELKSYKLQ+D+SENP K S+H KRKLGGDAP+VESPAK+
Sbjct: 548 REFGSLEDFDHAVRKVNPRLEELKSYKLQIDDSENPVKQSDHSKRKLGGDAPNVESPAKK 607

Query: 605 LKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYNDQCT 664
           LKD+AHGPKKV EKGKAQLQ+LD QTG+ + + KKPDD+SDQQM D VQ KGKVYNDQCT
Sbjct: 608 LKDSAHGPKKVTEKGKAQLQNLDDQTGDIRGRVKKPDDSSDQQMNDSVQGKGKVYNDQCT 667

Query: 665 AFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAAVAKN 724
           AF+SNLNLK TY+HLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHL A VAKN
Sbjct: 668 AFISNLNLKVTYDHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLEAGVAKN 727

Query: 725 KQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAK-PRKANEQPPAERKDGGNKV 784
           KQLLLGKKISIARSDPK+ GGH  DRA GGK  ES SS+K P K NEQP   RK GGN V
Sbjct: 728 KQLLLGKKISIARSDPKR-GGHGMDRAGGGKRFESRSSSKEPHKVNEQPSGLRKHGGNSV 740

Query: 785 ELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFKG 831
           ELKGKNTFAVPRNVRALGWTADKP+T EQ+DE PK+NDEFRKLYFKG
Sbjct: 788 ELKGKNTFAVPRNVRALGWTADKPKTLEQDDENPKSNDEFRKLYFKG 740

[Close]

BLAST of CmoCh06G000060 vs. TAIR 10
Match: AT4G24270.1 (EMBRYO DEFECTIVE 140 )

HSP 1 Score: 820.8 bits (2119), Expect = 9.6e-238
Identity = 454/831 (54.63%), Postives = 580/831 (69.80%), Query Frame = 0


Query: 14  SDDENLV-NGDDPMPDL----PQNPTSPAS-DSSSSDSDSEVDESDQKLQLQTLQSELSS 73
           +DD  LV N D  M D     P     P+S DS  SDSDSE DE++   Q+ TL+SELS+
Sbjct: 3   ADDTELVSNTDQKMEDASAENPARADPPSSDDSGDSDSDSE-DEAESNQQIVTLESELSA 62

Query: 74  NPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASISTGPEDVA 133
           NP NYDA+VQYIKLLRK  +++ LR+AREAMS +FPL+PS+W EWA+DEAS++   E+V 
Sbjct: 63  NPYNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASLAAS-ENVP 122

Query: 134 AIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALTAAGLHFT 193
            I  LYERG+ DY SVSLWCDYL+F+ E+DP VR   +  I K R LFERA+ AAG H T
Sbjct: 123 EIVMLYERGLSDYQSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGFHVT 182

Query: 194 EAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAYKAW 253
           E  ++WE YREFE+ +  +IDE D + + KQ+Q IRSIFHR LS+PL N++STL AYK W
Sbjct: 183 EGNRIWEGYREFEQGVLATIDEADIEERNKQIQRIRSIFHRHLSVPLENLSSTLIAYKTW 242

Query: 254 EMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDTERLHQYI 313
           E+E  QG  LD  S+D   V  QVA A ++A  MY+ R   EE ISKQDL+DTE+  +++
Sbjct: 243 ELE--QGIDLDIGSDDLSKVSHQVAVANKKAQQMYSERAHLEENISKQDLSDTEKFQEFM 302

Query: 314 IYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRATRN 373
            Y+KFE+++GDP RVQ ++ERAVA++PV  DLW+DYT Y+DKTLKV   + + YSRATR+
Sbjct: 303 NYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLWIDYTVYLDKTLKVGKAITHAYSRATRS 362

Query: 374 CPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRRISS 433
           CPW GDLW +YLLALER  ASE EI  VFEKS+ C+FS+  EYLDL+LTR+DGLRRR+ S
Sbjct: 363 CPWTGDLWARYLLALERGSASEKEIYDVFEKSLQCTFSSFEEYLDLYLTRVDGLRRRMLS 422

Query: 434 AVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLVAARGVWE 493
              LE  L YSLI+ETFQ+ASDYL+PH++N++ L+ L+ YWA LE+N+GKDL  ARGVW+
Sbjct: 423 TRMLE-ALDYSLIRETFQQASDYLTPHMQNTDSLLHLHTYWANLELNIGKDLAGARGVWD 482

Query: 494 SLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFEREF 553
           S LK SG +LAAW  YI ME+   HI  ARSIY+RCY+++F G+GSEDIC  WLRFERE 
Sbjct: 483 SFLKKSGGMLAAWHAYIDMEVHLGHIKEARSIYRRCYTRKFDGTGSEDICKGWLRFEREH 542

Query: 554 GSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPS----EHGKRKLGGDA-PDVESPA 613
           G LE FD A +KV PRLEEL+  +LQ + +  P KPS    EH  +K   +   + ES A
Sbjct: 543 GDLEHFDLAVQKVMPRLEELQLMRLQQEST--PVKPSAGLKEHSSQKRKAEQNVEEESLA 602

Query: 614 KRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYNDQ 673
           KR K  +   K+V+  G++   +    T N KA+  K  D+  ++ +D    K KVY D+
Sbjct: 603 KRQKRKSQ--KEVDLGGQS---ATVPATKNVKAENGKTADSDKEETEDAKPLKPKVYRDE 662

Query: 674 CTAFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAAVA 733
           CTAF+SNL++KA  E +R FF D GGV +IRILH K TGK RGLAY DF DD HL AA+A
Sbjct: 663 CTAFISNLSVKAQEEDIRKFFGDDGGVDSIRILHHKDTGKPRGLAYADFVDDEHLAAAIA 722

Query: 734 KNKQLLLGKKISIARSDPKKGGGHTTDRASGGKTSESVSSAKPRKANE----QPPAERKD 793
           KN+++  GKKISIARS+PKKG    T R + G  +    S    KA      +   ERK 
Sbjct: 723 KNRKMFFGKKISIARSNPKKGKKEFTRRGNDGSGNSKDPSLISEKAKAPLGGETEGERK- 782

Query: 794 GGNKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFK 830
            GN+VE++GKNTFAVPRNV+ LG+T  KP      DE PK+NDEFR ++ K
Sbjct: 783 -GNEVEVRGKNTFAVPRNVKPLGYTTPKP----SADETPKSNDEFRNMFLK 815

[Close]

BLAST of CmoCh06G000060 vs. TAIR 10
Match: AT4G24270.2 (EMBRYO DEFECTIVE 140 )

HSP 1 Score: 819.3 bits (2115), Expect = 2.8e-237
Identity = 455/832 (54.69%), Postives = 581/832 (69.83%), Query Frame = 0


Query: 14  SDDENLV-NGDDPMPDL----PQNPTSPAS-DSSSSDSDSEVDESDQKLQLQTLQSELSS 73
           +DD  LV N D  M D     P     P+S DS  SDSDSE DE++   Q+ TL+SELS+
Sbjct: 3   ADDTELVSNTDQKMEDASAENPARADPPSSDDSGDSDSDSE-DEAESNQQIVTLESELSA 62

Query: 74  NPSNYDAHVQYIKLLRKVGDIDNLRKAREAMSEMFPLTPSMWQEWAKDEASISTGPEDVA 133
           NP NYDA+VQYIKLLRK  +++ LR+AREAMS +FPL+PS+W EWA+DEAS++   E+V 
Sbjct: 63  NPYNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASLAAS-ENVP 122

Query: 134 AIERLYERGVFDYLSVSLWCDYLNFVQEYDPMVRDRATSRIKKARDLFERALTAAGLHFT 193
            I  LYERG+ DY SVSLWCDYL+F+ E+DP VR   +  I K R LFERA+ AAG H T
Sbjct: 123 EIVMLYERGLSDYQSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGFHVT 182

Query: 194 EAEKLWEAYREFEKSIYQSIDETDTQAKEKQVQLIRSIFHRQLSLPLSNMNSTLEAYKAW 253
           E  ++WE YREFE+ +  +IDE D + + KQ+Q IRSIFHR LS+PL N++STL AYK W
Sbjct: 183 EGNRIWEGYREFEQGVLATIDEADIEERNKQIQRIRSIFHRHLSVPLENLSSTLIAYKTW 242

Query: 254 EMEVKQGCILDGKSNDSDGVPSQVASAYQRALDMYNARVQFEEQISKQDLTDTERLHQYI 313
           E+E  QG  LD  S+D   V  QVA A ++A  MY+ R   EE ISKQDL+DTE+  +++
Sbjct: 243 ELE--QGIDLDIGSDDLSKVSHQVAVANKKAQQMYSERAHLEENISKQDLSDTEKFQEFM 302

Query: 314 IYLKFEQSAGDPARVQVLFERAVADFPVVVDLWLDYTRYMDKTLKVSNIVRNVYSRATRN 373
            Y+KFE+++GDP RVQ ++ERAVA++PV  DLW+DYT Y+DKTLKV   + + YSRATR+
Sbjct: 303 NYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLWIDYTVYLDKTLKVGKAITHAYSRATRS 362

Query: 374 CPWIGDLWVQYLLALERAHASEGEIASVFEKSVLCSFSTLYEYLDLFLTRIDGLRRRISS 433
           CPW GDLW +YLLALER  ASE EI  VFEKS+ C+FS+  EYLDL+LTR+DGLRRR+ S
Sbjct: 363 CPWTGDLWARYLLALERGSASEKEIYDVFEKSLQCTFSSFEEYLDLYLTRVDGLRRRMLS 422

Query: 434 AVELEDVLGYSLIKETFQRASDYLSPHLKNSEDLVRLYAYWARLEINLGKDLVAARGVWE 493
              LE  L YSLI+ETFQ+ASDYL+PH++N++ L+ L+ YWA LE+N+GKDL  ARGVW+
Sbjct: 423 TRMLE-ALDYSLIRETFQQASDYLTPHMQNTDSLLHLHTYWANLELNIGKDLAGARGVWD 482

Query: 494 SLLKISGSLLAAWEGYIAMEIESNHINNARSIYKRCYSKRFPGSGSEDICHSWLRFEREF 553
           S LK SG +LAAW  YI ME+   HI  ARSIY+RCY+++F G+GSEDIC  WLRFERE 
Sbjct: 483 SFLKKSGGMLAAWHAYIDMEVHLGHIKEARSIYRRCYTRKFDGTGSEDICKGWLRFEREH 542

Query: 554 GSLEDFDHAARKVNPRLEELKSYKLQMDESENPAKPS----EHGKRKLGGDA-PDVESPA 613
           G LE FD A +KV PRLEEL+  +LQ + +  P KPS    EH  +K   +   + ES A
Sbjct: 543 GDLEHFDLAVQKVMPRLEELQLMRLQQEST--PVKPSAGLKEHSSQKRKAEQNVEEESLA 602

Query: 614 KRLKDAAHGPKKVNEKGKAQLQSLDGQTGNSKAKAKKPDDTSDQQMKDFVQEKGKVYNDQ 673
           KR K  +   K+V+  G++   +    T N KA+  K  D+  ++ +D    K KVY D+
Sbjct: 603 KRQKRKSQ--KEVDLGGQS---ATVPATKNVKAENGKTADSDKEETEDAKPLKPKVYRDE 662

Query: 674 CTAFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAYVDFSDDAHLNAAVA 733
           CTAF+SNL++KA  E +R FF D GGV +IRILH K TGK RGLAY DF DD HL AA+A
Sbjct: 663 CTAFISNLSVKAQEEDIRKFFGDDGGVDSIRILHHKDTGKPRGLAYADFVDDEHLAAAIA 722

Query: 734 KNKQLLLGKKISIARSDPKKGGGHTTDR----ASGGKTSESVSSAKPR-KANEQPPAERK 793
           KN+++  GKKISIARS+PKKG    T R     SG     S+ S K +     +   ERK
Sbjct: 723 KNRKMFFGKKISIARSNPKKGKKEFTRRGNVDGSGNSKDPSLISEKAKAPLGGETEGERK 782

Query: 794 DGGNKVELKGKNTFAVPRNVRALGWTADKPRTAEQEDEKPKTNDEFRKLYFK 830
             GN+VE++GKNTFAVPRNV+ LG+T  KP      DE PK+NDEFR ++ K
Sbjct: 783 --GNEVEVRGKNTFAVPRNVKPLGYTTPKP----SADETPKSNDEFRNMFLK 816

[Close]

BLAST of CmoCh06G000060 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 60.8 bits (146), Expect = 5.8e-09
Identity = 34/105 (32.38%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 649 KDFVQEKGKVYNDQCTAFVSNLNLKATYEHLRDFFQDVGGVVAIRILHDKFTGKSRGLAY 708
           +D V+ +     DQ T F   + L+AT   + +FF   G V  +RI+ D+ + +SRG+ Y
Sbjct: 217 EDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGY 276

Query: 709 VDFSDDAHLNAAVAKNKQLLLGKKISIARSDPKKGGGHTTDRASG 754
           V+F D   +  A+A + Q LLG+ + +  S+ +K    +T  A+G
Sbjct: 277 VEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAG 321

[Close]

BLAST of CmoCh06G000060 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 54.3 bits (129), Expect = 5.4e-07
Identity = 49/183 (26.78%), Postives = 90/183 (49.18%), Query Frame = 0


Query: 575 DESENPAKPSEHGKRKLGGDAPDVESPAK-RLKDAAHGPKKVNEKGKAQ--LQSLDGQTG 634
           D  ++  K   +GK +      D +S  +   KD +   +  +E+ ++Q   +SL+ +  
Sbjct: 90  DREKDVDKEERNGKDRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQEREKSLEIEPK 149

Query: 635 NSKAKAKKPDDTSDQQMK-DFVQEKGKVYNDQCTAFVSNLNLKATYEHLRDFFQDVGGVV 694
             + K +  D    +  K D V+ +     DQ T F   + L+AT   + +FF   G V 
Sbjct: 150 ERETKDRDRDRRRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVR 209

Query: 695 AIRILHDKFTGKSRGLAYVDFSDDAHLNAAVAKNKQLLLGKKISIARSDPKKGGGHTTDR 754
            +RI+ D+ + +SRG+ YV+F D   +  A+A + Q LLG+ + +  S+ +K    +T  
Sbjct: 210 DVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTA 269

[Close]

BLAST of CmoCh06G000060 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 54.3 bits (129), Expect = 5.4e-07
Identity = 34/114 (29.82%), Postives = 58/114 (50.88%), Query Frame = 0


Query: 649 KDFVQEKGKVYNDQCTAFVSNLNLKATYEHLRDFFQDVGGVVA---------IRILHDKF 708
           +D V+ +     DQ T F   + L+AT   + +FF   G V           +RI+ D+ 
Sbjct: 197 EDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRI 256

Query: 709 TGKSRGLAYVDFSDDAHLNAAVAKNKQLLLGKKISIARSDPKKGGGHTTDRASG 754
           + +SRG+ YV+F D   +  A+A + Q LLG+ + +  S+ +K    +T  A+G
Sbjct: 257 SRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAG 310

The following BLAST results are available for this feature:

BLAST of CmoCh06G000060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3DJT0	8.8e-87	31.07	Squamous cell carcinoma antigen recognized by T-cells 3 OS=Danio rerio OX=7955 G...	[more]
Q5REG1	8.5e-82	29.16	Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo abelii OX=9601 ...	[more]
Q9JLI8	1.1e-81	28.63	Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus OX=10090...	[more]
Q15020	1.9e-81	29.20	Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo sapiens OX=9606 ...	[more]
Q9USY2	2.3e-34	21.67	Uncharacterized RNA-binding protein C1861.04c OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of CmoCh06G000060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHD1	0.0e+00	100.00	squamous cell carcinoma antigen recognized by T-cells 3 OS=Cucurbita moschata OX...	[more]
A0A6J1I352	0.0e+00	98.55	squamous cell carcinoma antigen recognized by T-cells 3 OS=Cucurbita maxima OX=3...	[more]
A0A1S3CCC2	0.0e+00	85.13	squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 OS=Cucumis me...	[more]
A0A5D3CUH2	0.0e+00	82.54	Squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 OS=Cucumis me...	[more]
A0A1S4E2W5	0.0e+00	75.33	squamous cell carcinoma antigen recognized by T-cells 3 isoform X2 OS=Cucumis me...	[more]

BLAST of CmoCh06G000060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24270.1	9.6e-238	54.63	EMBRYO DEFECTIVE 140	[more]
AT4G24270.2	2.8e-237	54.69	EMBRYO DEFECTIVE 140	[more]
AT2G16940.2	5.8e-09	32.38	Splicing factor, CC1-like	[more]
AT2G16940.1	5.4e-07	26.78	Splicing factor, CC1-like	[more]
AT2G16940.3	5.4e-07	29.82	Splicing factor, CC1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 352..384 e-value: 0.19 score: 20.8 coord: 477..509 e-value: 20.0 score: 13.2 coord: 511..546 e-value: 97.0 score: 8.2 coord: 166..202 e-value: 0.049 score: 22.8 coord: 124..155 e-value: 5.8 score: 15.9 coord: 86..118 e-value: 46.0 score: 10.6 coord: 317..349 e-value: 1.1E-4 score: 31.5
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 664..736 e-value: 1.8E-16 score: 70.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 666..733 e-value: 4.7E-14 score: 52.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 663..740 score: 15.408587
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 62..256 e-value: 4.6E-50 score: 172.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 297..581 e-value: 9.4E-48 score: 164.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 63..575
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 630..783 e-value: 2.1E-22 score: 81.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 769..784
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 807..830
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 737..830
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..646
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..617
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 750..766
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR17204:SF25	EMBRYO DEFECTIVE 140	coord: 17..825
None	No IPR available	PANTHER	PTHR17204	PRE-MRNA PROCESSING PROTEIN PRP39-RELATED	coord: 17..825
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 658..755

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000060.1	CmoCh06G000060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding