CmoCh06G000050 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh06G000050
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR71-like
Location	Cmo_Chr06: 19348 .. 21154 (-)
RNA-Seq Expression	CmoCh06G000050
Synteny	CmoCh06G000050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCGGAGGCACCTTCCTTTTCCAACGCCCATTCCTCTGTTCCCCCGAACCGCATAAATAAATACTCCTTCCCCTCTCTTCCCTCCGCTTCCCCCTCAACCCTCCTCCTTCTCCCATGCCTTTTCTTCCTCGCCTTTCCACCTAAATGCTCTTCTTCTACGCCGGTATCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCGCATTTTCTGCGCTTGGATTCGCCTCACTCTTCCACCTCTCCTCCATTTTTGTACAATTCCTTGTCTTTATTATAATTCTTCATCCATTCCATTTCAGACATTGTAAAACACGTTTTCCTCAAATTCGAATTTTAACCTCACCGTTTCCTGTTGTCTTGACCCTTTTTTTTCCTCCTTTATTGTCAATCAGGTAATATCATCATTGTTGTTCCCTTGCGTTGCATTGCATTGCAACCTTCTTACAGACTTTGATTCTGGTTTTGAATCTCAATGTGAGGAACGAATGGTGAGAGGGAATTTTAGTCTCTTGTACATGATTTGATGAATCAAATGGATCCTACTCTGATTATTATTGTTTCTTTATTTGTTGGTTGTATGGAGCATGCTTGTGTTTCTCTTTCTTTCTTCTTGCTATAGTACAGCCTTTCCTTTTATTTCCTCTACTTGATTTTCTACTTTGAGCTTTTTACTATTTTAGTTTGTGTTAGTGTCATTCAAAACTATTCTATTACCGGCAATTTCAACTTCTAGGTAGTGGTGTTCTGATGAGAATTGTGTTTCTGGAATTAGACACAGCGAGTTCTGTCCTGGGGTTCTGTTCAATTGTGGTGAACGTCTAGAAATGGATGAAAACGGTGGGATCAAGTTGACTGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGCGTCACAATTAACCCGATATCCAAAGCAGCAGCCCATGAAAATCAAAGCCAAAATCTAAATCTAAATAATGGGATCCTTTCACCAGCAATCAACAAAAGGCTGACGAATGTTTTGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAACATCCACCCGACGTCCCAAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTCATCATTCCCACTAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATAGCGGCGGCCTCACATTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAAAGCCAGCACAAGGATCATCCTGATGACCACACCCCAGGTAATAAATTGTATTTGTATACATACCCATTTGGTTTGCAAAGCTGATAGTTGTTGACTTTGGTATGAATTCCATTAGTATTATGACATGAATAACATGCTTCCTGTTATTGACTTCGGTTGCAGCTGGGAGTTCCTTAACCATGGAAGGATAAAAAAAAATGGTTGTGATCCACAGCAGAGGGGGCGCTGTTTGCAAAGGCAGATGGATGTGTGTGTGCCTGCCACACATGAGATATGTTGTGAAATTGAAGTGTTGTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTGGAGTCAGAAAAATTAGGGATGTGTTTAAGTAGTAATTAGAAAAGTGGAGGATTAATGTACCGTTTGGTTTGGTTTGCTTTGCTTTGCTTTGTTTTTTGCTTTTGCTTTTGTTTTTGGGAATACCCTCTCAGGGGAGATGTGAACTTCCATTTGCTTCCCTGTATTTGAATGTGAAGCACATGATTGTTTGACCA

mRNA sequence

TTTCCGGAGGCACCTTCCTTTTCCAACGCCCATTCCTCTGTTCCCCCGAACCGCATAAATAAATACTCCTTCCCCTCTCTTCCCTCCGCTTCCCCCTCAACCCTCCTCCTTCTCCCATGCCTTTTCTTCCTCGCCTTTCCACCTAAATGCTCTTCTTCTACGCCGACATTGTAAAACACACTTTGATTCTGGTTTTGAATCTCAATGTGAGGAACGAATGACACAGCGAGTTCTGTCCTGGGGTTCTGTTCAATTGTGGTGAACGTCTAGAAATGGATGAAAACGGTGGGATCAAGTTGACTGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGCGTCACAATTAACCCGATATCCAAAGCAGCAGCCCATGAAAATCAAAGCCAAAATCTAAATCTAAATAATGGGATCCTTTCACCAGCAATCAACAAAAGGCTGACGAATGTTTTGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAACATCCACCCGACGTCCCAAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTCATCATTCCCACTAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATAGCGGCGGCCTCACATTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAAAGCCAGCACAAGGATCATCCTGATGACCACACCCCAGCTGGGAGTTCCTTAACCATGGAAGGATAAAAAAAAATGGTTGTGATCCACAGCAGAGGGGGCGCTGTTTGCAAAGGCAGATGGATGTGTGTGTGCCTGCCACACATGAGATATGTTGTGAAATTGAAGTGTTGTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTGGAGTCAGAAAAATTAGGGATGTGTTTAAGTAGTAATTAGAAAAGTGGAGGATTAATGTACCGTTTGGTTTGGTTTGCTTTGCTTTGCTTTGTTTTTTGCTTTTGCTTTTGTTTTTGGGAATACCCTCTCAGGGGAGATGTGAACTTCCATTTGCTTCCCTGTATTTGAATGTGAAGCACATGATTGTTTGACCA

Coding sequence (CDS)

ATGGATGAAAACGGTGGGATCAAGTTGACTGGAATCCGCCAGATTGTGAGGCTGAAAGAGACTCTCCAACACTGGCAAGGCGTCACAATTAACCCGATATCCAAAGCAGCAGCCCATGAAAATCAAAGCCAAAATCTAAATCTAAATAATGGGATCCTTTCACCAGCAATCAACAAAAGGCTGACGAATGTTTTGTGTTGTGATTCGGATGAGGAGAGCTGCCAGAGCCCTGAACATCCACCCGACGTCCCAAAAGGGTACTTGGCTGTTTATGTTGGGCCGGAGCTTCGGAGGTTCATCATTCCCACTAGCTATCTTAGCCATTCGGTGTTCAAGGTGTTGCTGGAAAAGGCAGAGGAGGAGTTTGGATTTGATCATAGCGGCGGCCTCACATTCCCATGCGAGATCGAGACCTTCAAATACCTTCTCAAGTGCATGGAAAGCCAGCACAAGGATCATCCTGATGACCACACCCCAGCTGGGAGTTCCTTAACCATGGAAGGATAA

Protein sequence

MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKRLTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG

Homology

[Close]

BLAST of CmoCh06G000050 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.4e-17
Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 82  DVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFPCEIETFK 141
           D PKGYLAVYVG  ++RF+IP S+L+  +F+ LL +AEEEFG+DH  GGLT PC  + F+
Sbjct: 24  DAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQ 83

Query: 142 YLLKCMESQ 150
           ++  C+ +Q
Sbjct: 84  HITSCLSAQ 92

[Close]

BLAST of CmoCh06G000050 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-16
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0


Query: 82  DVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFPCEIETFK 141
           D PKGYLAVYVG +L+RF+IP SYL+   F+ LL +AEEEFG+DH  GGLT PC  + F+
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 142 YLLKCM 147
            +  C+
Sbjct: 76  CITSCL 81

[Close]

BLAST of CmoCh06G000050 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.3e-16
Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 35  KAAAHENQSQNLNLNNGILSPAINKRLTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGP 94
           K ++    SQ  ++   +   +  +++ NV  C  ++E     + P DVPKG+  VYVGP
Sbjct: 4   KRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQED----DLPQDVPKGHFPVYVGP 63

Query: 95  ELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDHSGGLTFPCEIETFKYLL 144
              R+I+P S+L HS F+ LL  AEEEFGFDH  GLT PC+   F+ L+
Sbjct: 64  NRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLI 108

[Close]

BLAST of CmoCh06G000050 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.2e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0


Query: 82  DVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFPCEIETFK 141
           D PKGYLAVYVG +++RF+IP SY++   F+ LL +AEEEFG+DH  GGLT PC  E F+
Sbjct: 16  DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75

Query: 142 YLLKCM 147
            +  C+
Sbjct: 76  RITCCL 81

[Close]

BLAST of CmoCh06G000050 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.0e-15
Identity = 38/59 (64.41%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 82  DVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDH-SGGLTFPCEIETF 140
           DVPKGY AVYVG ++RRF IP SYL+   F+ LL +AEEEFG+DH  GGLT PC+ E F
Sbjct: 25  DVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEF 83

[Close]

BLAST of CmoCh06G000050 vs. ExPASy TrEMBL
Match: A0A6J1FIL4 (auxin-responsive protein SAUR71-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445786 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.7e-94
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR
Sbjct: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG 169
           EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG
Sbjct: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG 168

[Close]

BLAST of CmoCh06G000050 vs. ExPASy TrEMBL
Match: A0A6J1FPE8 (uncharacterized protein LOC111445786 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445786 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.7e-94
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR
Sbjct: 27  MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 86

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE
Sbjct: 87  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 146

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG 169
           EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG
Sbjct: 147 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG 194

[Close]

BLAST of CmoCh06G000050 vs. ExPASy TrEMBL
Match: A0A6J1I8D8 (auxin-responsive protein SAUR71-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470119 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.3e-92
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIKLTGIRQIVRLKETLQHWQGV INPISKAAAHEN SQN+N NNGILSPAINKR
Sbjct: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVAINPISKAAAHENPSQNINQNNGILSPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG 169
           EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG
Sbjct: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG 168

[Close]

BLAST of CmoCh06G000050 vs. ExPASy TrEMBL
Match: A0A6J1I1S2 (uncharacterized protein LOC111470119 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470119 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.3e-92
Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIKLTGIRQIVRLKETLQHWQGV INPISKAAAHEN SQN+N NNGILSPAINKR
Sbjct: 165 MDENGGIKLTGIRQIVRLKETLQHWQGVAINPISKAAAHENPSQNINQNNGILSPAINKR 224

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE
Sbjct: 225 LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 284

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG 169
           EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG
Sbjct: 285 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTMEG 332

[Close]

BLAST of CmoCh06G000050 vs. ExPASy TrEMBL
Match: A0A5A7UGQ0 (Auxin-responsive protein SAUR71 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001580 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 154/167 (92.22%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDENGGIK+ GIRQIVRLKETLQHWQGVT+ P SKAAAHEN SQN N N+GILSPAINKR
Sbjct: 1   MDENGGIKM-GIRQIVRLKETLQHWQGVTVCPKSKAAAHENGSQNQNQNHGILSPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           LTNVLCCDSDEE+CQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE
Sbjct: 61  LTNVLCCDSDEETCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTME 168
           EFGFDHSGGLTFPCEIETFKYLLKCMESQ KD PDDHTPA SSLTME
Sbjct: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQQKDPPDDHTPAESSLTME 166

[Close]

BLAST of CmoCh06G000050 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 218.4 bits (555), Expect = 4.4e-57
Identity = 113/159 (71.07%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDEN   KLTGIRQIVRLKE LQ WQ VTI P S+        Q +     ++SPAINKR
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAV----AMISPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           L +V   DSDEE+CQSPE P DVPKG LAVYVGPELRRFIIPTSYLSHS+FKVLLEKAEE
Sbjct: 61  LLDVKNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKD-HPDDHT 159
           EFGFD SG LT PCE+ETFKYLLKCME+  KD HPDD++
Sbjct: 121 EFGFDQSGALTIPCEVETFKYLLKCMENNLKDLHPDDNS 155

[Close]

BLAST of CmoCh06G000050 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 218.4 bits (555), Expect = 4.4e-57
Identity = 113/159 (71.07%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDEN   KLTGIRQIVRLKE LQ WQ VTI P S+        Q +     ++SPAINKR
Sbjct: 1   MDENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAV----AMISPAINKR 60

Query: 61  LTNVLCCDSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEE 120
           L +V   DSDEE+CQSPE P DVPKG LAVYVGPELRRFIIPTSYLSHS+FKVLLEKAEE
Sbjct: 61  LLDVKNGDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEE 120

Query: 121 EFGFDHSGGLTFPCEIETFKYLLKCMESQHKD-HPDDHT 159
           EFGFD SG LT PCE+ETFKYLLKCME+  KD HPDD++
Sbjct: 121 EFGFDQSGALTIPCEVETFKYLLKCMENNLKDLHPDDNS 155

[Close]

BLAST of CmoCh06G000050 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-55
Identity = 109/168 (64.88%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 1   MDENGGIKLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKR 60
           MDEN   KLTGI+QIVRLKE LQ WQ VTI   S     ++       +  I+SP INKR
Sbjct: 1   MDENNAAKLTGIKQIVRLKEILQKWQTVTIGSKS-----DDGELGARKHTAIISPVINKR 60

Query: 61  LTNVLCCDSDEE-SCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAE 120
           L ++  CDSDEE +CQSPE PPDVPKGYLAVYVGPELRRFIIPT++LSHS+FKVLLEKAE
Sbjct: 61  LLDLKTCDSDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAE 120

Query: 121 EEFGFDHSGGLTFPCEIETFKYLLKCMESQHKDHPDDHTPAGSSLTME 168
           EE+GFDHSG LT PCE+ETFKYLLKC+E    +HP D T A   +  E
Sbjct: 121 EEYGFDHSGALTIPCEVETFKYLLKCIE----NHPKDDTSAEDPVETE 159

[Close]

BLAST of CmoCh06G000050 vs. TAIR 10
Match: AT2G24400.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 6.6e-21
Identity = 57/146 (39.04%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 8   KLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKRLTNVLCC 67
           K   IR+IV+L++ L+ W+      I+  AA+ N   N +   G  S    KR  +    
Sbjct: 5   KSNKIREIVKLQQLLKKWRK---QAIASKAANNNNEDNNSSGGGSKSIKFLKRTLSFTDV 64

Query: 68  DSDEESCQSPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEEFGFDHS 127
            +             VPKGYLAV VG E +R+ IPT YLSH  F VLL +AEEEFGF  +
Sbjct: 65  TA-------------VPKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQA 124

Query: 128 GGLTFPCEIETFKYLLKCMESQHKDH 154
           G L  PCE+  F+ +LK ME +++ +
Sbjct: 125 GVLRIPCEVSVFESILKIMEEKNEGY 134

[Close]

BLAST of CmoCh06G000050 vs. TAIR 10
Match: AT4G31320.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20
Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 0


Query: 8   KLTGIRQIVRLKETLQHWQGVTINPISKAAAHENQSQNLNLNNGILSPAINKRLTNVLCC 67
           K   IR+IV+L++ L+ W+ V     +   A+ N+  N++ +N  +S  IN    N    
Sbjct: 5   KSNKIREIVKLQQILKKWRKVA---HASKQANNNKIDNVDDSNNNISININ---NNGSGS 64

Query: 68  DSDEESCQ------SPEHPPDVPKGYLAVYVGPELRRFIIPTSYLSHSVFKVLLEKAEEE 127
            S  +S +      S      +PKGYLAV VG E +R+ IPT YLSH  F VLL +AEEE
Sbjct: 65  GSGSKSIKFLKRTLSFTDTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEE 124

Query: 128 FGFDHSGGLTFPCEIETFKYLLKCMESQHKD 153
           FGF+ +G L  PCE+  F+ +LK ME    D
Sbjct: 125 FGFEQAGILRIPCEVAVFESILKIMEDNKSD 149

The following BLAST results are available for this feature:

BLAST of CmoCh06G000050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32295	7.4e-17	53.62	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33081	2.2e-16	57.58	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9SL45	6.3e-16	40.37	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P33082	8.2e-16	56.06	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33079	9.0e-15	64.41	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmoCh06G000050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIL4	2.7e-94	100.00	auxin-responsive protein SAUR71-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FPE8	2.7e-94	100.00	uncharacterized protein LOC111445786 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I8D8	4.3e-92	97.62	auxin-responsive protein SAUR71-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I1S2	4.3e-92	97.62	uncharacterized protein LOC111470119 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7UGQ0	2.8e-83	92.22	Auxin-responsive protein SAUR71 isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of CmoCh06G000050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20810.1	4.4e-57	71.07	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	4.4e-57	71.07	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.4e-55	64.88	SAUR-like auxin-responsive protein family	[more]
AT2G24400.1	6.6e-21	39.04	SAUR-like auxin-responsive protein family	[more]
AT4G31320.1	1.5e-20	39.74	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 74..145 e-value: 6.3E-26 score: 90.4
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 7..162
None	No IPR available	PANTHER	PTHR31374:SF247	BNAA02G05090D PROTEIN	coord: 7..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G000050.1	CmoCh06G000050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0016021	integral component of membrane