CmoCh05G014270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G014270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DEAD-box ATP-dependent RNA helicase
Location	Cmo_Chr05: 10933505 .. 10945979 (-)
RNA-Seq Expression	CmoCh05G014270
Synteny	CmoCh05G014270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAGCTGCCGTGAGAAACATTGGGGTGAAAGTTCGCCACACTCGGAACTTAGAAGCAGCCGCCCCGTAGTGCAGTCTGAGCTCCTGCGATCAATAGCAGCATCAAAGTTATGAACGAAGGGATGAAAACAACGACGAAGAAAATGGTTAAAGAGGATGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGCACGCTACTTTATGCGACGAACTCCGAGGTGTGTTGTGTGCCGACTTTGTTCTCTTCCTTCATCGCGTCCTTTTATAATCTGCTTTCTGTTATGCTAATCATTCAACAATCTACTGTAATAGTTTTTGAGGGTTTAGCGTATTCGGTTAATTGTATTGATTCTAATCTTGGCCTACATCTTCCGGTGTTGTTTTTTCTTCGATTGTAACAGATAAAATGGGTTTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCTGGGCGTCATGTGTATCCTTCGAACATAACTTCTTTTAGTTGATATATAGTTGATTGCAGATGCGCGTGTTTATATTTTGATAATAAACTGATTGTATTGAAGAAAAATGCATACGAATACAAAAGGGGGATATCTGGACATTGATTATCTTTATCACGTGGAAATTCATTGAATGGCACATCTATCTTTTGATATTTGCAGTGCTTCTGTAAGTTTTCTTAACTTCTTCCTGTAGTCTTGTTAATGCGGCCACAGGCACTGGCAAAACTGTTGCGTATTTGGTTCCCATCATCCATCACTTGCAGAAGTCCGATCGTAGGATTCAGCGGGCCGATGGAACATTCTGTGCGTAACAGTAGTAATTTCTCAATTTTGCCTCTGCCCACTTATTTAATTTTATTTATATATATTTAAAAGGAAACAAGCGAGTTCATCAAGAAACCAATAAACTAGAGACCAATGCCTCCCTTCCTGAAGGGGATCAAACACTACCCTCTCGTTCTAGGATTTTCGCTGAGGTTTCTAATTAGATCACAAAGTTCTGGATTTCTTGTGAAGAGAATTTCATGCAATCAAGAGCATTAGGATAGGTGCAGGACCAAACGGAATAGAAGAACCTGACAGAGCAAGTTCCATCACTCTACGACCCAAAGAGAGACAAAATTTCATTGACGAAATCAAATAATTATGTAAAAGTATCAATCGACATTCATTGAAAGAAAAAGCTGAAAATTAATTGAATTTCAAAAGCCTGAAACCAAACTGAAGAAAGCTATAGATAGAACAAACTTTTGTACATTGGCAGTATTGTTGAACTATCTCTCACTCACAGACATACCTGATATCTCCCATGTTTATTTGAATCTAACAAATTATTTGGCCATAGCGTTGGTTCTGGTACCAACGCGAGAGCTATGCATGCAGGTCTATGAAACTCTACAGAAATTATTACATCGTTATCATTGGATTGTCCCTGGTTACATAACAGGCGGGGAAAGCCGGTCGAAGGAGAAAGCCAGGTTGCGGAAAGGTAGGATAATCATAGTTTAAGTTATGGAATTACCATTTCATTTTGATGTAAGTTAGCTTTGTTCCATGACAATGTGTATGTGTTTGCTGGTCTTTTGGGAAAGAAATTATTTCATTTAATAAATTTTTAGCATAACGACTTCATAGCTATAATTGTAGTAATTGGATGGCGATAATTAGGGATGCACAATGAAACTGACAAAATTGGGCCAAACCAAAATGATTTTTCGGTTTAGTCGGTTTGCTGTTTTGTTTGATTTATGTTAAAATACCATTTTAGTTCATATGCTTGAGTCTTATTAAATTTTAGTCCTGCTTTCAAATGTCCAAATTTATTCTAGGTAGTTCTATAAATCTTTAAATTAGTCCTTATTGTTAGTTTTAACTTTAATATGATAAGATATTGAAGTTAATTTTATCAAACTGGGTACAATAATTATCATTTCCATTTGTGGAAATAAAAGATATGATTTGAATTTGTTTCCAAAATTTATAGCGAGAAGGCTAATAGTGACTACTTTTTTTTTTTTTTTTTTTTTTTGAAAAGTTAACAATAAACTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTATTGAAAAGTTAACAATAAACTAATAGTAGAGATTAATTTTAAGATTTGTTAAAATTACGCAAACCAAATTTGATCGTTTCAAAGTATAGGAAATAAAATAGCTCTTTGAGGTAAAACTGGCCATGTAAAATACCTTAACCTACTTTGGAATTTAACAGAGAAAGGTGTAGAACTAGTAGCAAGAGAACTCCCTAGAAGGATGGGGGGACATTGTGCTTTATTTTTAATATCAAAAACATGTTTTTTTTGTTGTGCTTTATGTGAGATCCCATATCGGTTGAAGAGGTGAAGGAAGCATTCCTTATAAGGGTGTGGAAACCTCCTAACAAACGCATTTTAAAACCGTGAGGCTGACAACGATACCCTAAAAACCCTAAACCCTAAACCCTTGAAACCGTGAGGCTAACGACGATACCCTAAACACTAAAAACCGCTATGGCTAACATGCCAATTTTTTTATGGTCTGTGCTCAGGTATATCAATTTTAGTTGCAACGCCAGGTCGGCTCTTGGATCACCTAAAGAACACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGGTATGGTTACTCTCTGCTTTTTAGTACAATGCATTCTGGATCGGTCCTCTTATTTTTCACTCTTCTACATGGAACTTGTGCATCTATACAGAATTTTCGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGATCATTTGGGCTCAAGGAAGAATATTGTCAATAAGGATAATGGCACTTCAAGTTTTGAATTCCCGCAGCAGAATTTGCTTTTTTCGGCCACCTTAAACGAAAAAGTAAACTGTTTTGCCAAAATTAGTTTAGAGAATCCCATTATGATTGGTCTTGATGCTGGCAACAATGCCCTTGAATTTCAACCATCTGAACATGGTCGATTTTTGGGACATGACATAAATGATGAAGCCCAGCCCACAAGGAAGGAAAAGAACTTAATTGCAGATTATAAAATACCAACCCAGTTAGTTCAGAGTTACGTGCAAGGTAATTTGATTAAAAGTTATATTTTATGAACTTTCACATGGTATTCATGAGTGCAGAGGATTGGATCCATGTTACTTTGACATTGAATTGACTATCCAGAGCATCCCTTTTGTATTTTTGTGCAGAGCCATGAAATTTCCTTTCTTAGGTCATCTACAACTGTGGTGCTTGCATGTAGATCTTTGAGTTTTATTTGGTTTGCCTCTTTGTTGTCTCAGACTATTGGTTTTGTTTTAATGTAACATAATTAGTAATTTTTTTTGTAATTTTCATTTAAATGGTTAATTGTTCTAATTTTTTTTGTTAGTTGTTTACCTAGTTAGTAGGTTGTAGGCTAACCACTAATCCCCTCTCAACAAGGGTTAATCTCATGTTATTGGCTTACCTTTTGAATCCTAATAAACATTCCTTCGATGATTTTTGGAGATGTCCTTTGATTGTTTGGTTGCATGAAATTTGTATAATAGCAACCCGATGAAAGGGGCTGATGGCTGGAAAAAGAGTAGCTACCCGCCAAAATAACATAGTTCAGTCTGATATATAATATAATATATTATAAACTATATGATATTGTAAAATAATAATCAAAATTAATTAACGATAGTTTATATTCAACCTAATATTTAGTGGGTAACTACGACTTTATGGTTTATAAGTATATTATAAAACACCTTTTGAACAATTATTTAAATTAGGGTTCAATTTTTGTAAATGCTACCAAACACATTTGGAAACATGAAATACAACTTAGTTTCATTAAATTTCTTGTTTTCAATTTTTTTTTCCTGATTGCATACCAAACAAGTCCTCACTAGTTATCCTACATCATAAAAAGCATCCCTTTGAGGATTTTTAGAGATTTTCTCCTTTGATGCTTGGTTGTATAATGTTTGGTCCTTTTTGTTCTTTTGCCCTCCTATTCATGCTGCATCTAACATGTACACTTGTGATTAATTTTTTGTTTGCAGCACCGTGTGCTTCTCGGTTGGCTGTGCTTTTTTCTGTTCTGAAGTATTTGTTTGAGAGAGACTGCTTCGAGAAGGTAAAGACGATTCAATACTTATGTTTAGGTGGAAGATTTAGTATTATCACTCGTAAAAAAGGTTTTATTTTTATCATGTTCTTAGCAGTTATAGAATAATGCACACAAATGCAATAAAAGTAATGTGGCTCTCTACTCTTGTGTCACTCTATCTTAGTACTTTTTGTTGCATCCTCTAGGAAGAGTTGTGTGAGGATATTTGTAGAGGCAAACTGCCCAAAAATGTAAGGATATATTTGGAGAGGCAAACTGCCTAATAATTAGGATGTATTCTTACTTCATTCCCTGCCTTCAAGACTCAAGAGCTTCAATAAAGACAACATTCAAAAAGCCCTTCGTTCATCTCTCACTTCATGTTTGTCTTGATTGCAAGAATAGAAGAGGAGCTTTGATCATGTTTTCATCCGATGTGAATTAGTTTTCATTTGTCAGTTCTAATGCACCAAGTCTTTCTGCATATGATGTATATCTTGTAAATCATCAAAAATGATCTATCCAAAGAACAATAGTTATCAAAATTGATCTTCTTACTCTATCAGCATGGGAAGAAGTCAAGTTGATGGTGATGAAAATCCTGCTCTCTTCCATAGGTTTGTGGCTGAAAATAGAAGGAAACGTACAATTGGTGAAATTCTTTTGAGCACGGGTGTGTTTGTTGAATGTTTCTGATAATGAAGAAGATGAATTTGTAGACTTCTATAACCATTTGCATATATGCCTGATATCCCTAATTGGAGTCCTCTAACGGACTTACCAAGTGATCAGTTGGAAGAACCTTTTGCCAAAGATGAGATTTGTAAAGCTGTCAATGCTATGGGCACTAAAAGAGCGTTCAATTATTTTTTTAGGAATGCCACCATTAATGTGAGCCTTAATGAAACATATCTGTCTCATCCCCTAGAAGATTGGAGCTAAACTTGTGGGGGATTTTAGACCCATTAGTCTCACCTCATGTCTTCGCAAGATCACGAGGTTATCTGAGAGATTAAAGTCTTGTCTTTTACTATATTTAATTTTCTTCAATCCGCTACTTTTGGATGCATCTCTTATTGCTAATGTGTTAACTGGTGAATGGAAAAGGAAAACAGAGAAAGGGATGGCCATCAAGCTTGATGTAGAAAAGGCTTTTGACATGGTTGATTGGAATTTTCTGGATGAAATCCTTTGTGTCGAGGGTTTTAGGATCAAATGGAGAAGATGGATTCAAGGTTGTAACTCAACCGCCAACTACTTTATCATTATCAATGGCAAGCCTAGAGGCAGGATCAGAGCCACTAGGGGTTTACGCTAAGGGGATCCCCCTTCCTCTTCATCATGGTGATTGATCAAAGGTTTTCCGATTGGCAAAGATATCCATGCTCTTCCATTGATCATCTAATATGAATTTGGGGATGACACCATCCTTTTCTCCATACAAAGGAGGTGACAACCTTTTCTGCATTATTAAATATTTGGAGGAAGCTTTGGGCCTTAATATAAACTGAAAAAATTTGAAACTATGGGAATTGGTTTCGGTAATCAGCAACTATCTTATCTTGGTAGCTGGTTTGGGTGCAAAATGGGCAAGTGGCTAAATACTTACCTTGGCTTACCCCTTAATGGTAAGGCTAGCTCATCATCCTTTTGGGACCTGATTGTTGAGAAAGTTTAGAAAGACTTGTGTTTCGGTTCCACTTACCTATCCAAGCGGTCAATTCATGCTACATTTTAAAACCTCTCTATTTATTATTGATATCTTTTCAAAGCTCCAACAAAGGTGGCCTACAGTTTAGAGAAACTTCTTAGAACTTTTTTTCTGGAAAGGTAGTATTGAACAAAAAGGCAACCATCTCTTAAAATGGGAAGTTGTGAAGGCCCCAATTGAAGAAGGTGGACTCGAAATCAGAGATTTATAACAGAAATGCCTCTCTTCCTGCAAAATGGATTTGGCGTTTCCACCTTGAAAAAGAGGCTTTGTGGAGGATGGTTATTGTTGCTAAATATGGATCTTGCCACTTTGACCTAAAACCACCAACTATAATTTTAAATTCATCCAGAGGGCCTTGGAAATCTATTGATAAATTGAAAGCTGTTATCTGTTCCCATATTTCCATCAAGGTCTGAAATGGTAACAATACACACTTTTGGAAGGATAATTGGAGTGGAAATACTAGCCTTCAATACGTGGACCCTTGGCTGTACCATCTCTCTTTTGTAAATCTAACTGAATCTAAAGGGATTAAGATTTTCTAGAGAATTCCTTATAGAGTCCAAGAGATTCTAAGATGTTTATAGAATATCTTGGAATATTTGTTTACAACCTCCAAGATAATTCTAGATAGAACTAATGTGGGATATATTTGAGATAATTAAGTGTTGATCCTCCAAGAAGCTTATAAACGAGTTAGTGTTATTTTTTATTTTACACGATGGCTATACTTGCCAGAAGGTAACAAAATTACTTAGTTACTTCTCATTTTGATTACTATTTTGTGAACTATTATTATTAACCTTTTCTTCTTTCATGACTCCATTGTTACTAACTTGTTTACAGACTTTGGTGCTCTTTTCAACATGTGATGCTGTAGATTTCCACTACTCCCTGTTTGGTGGATTTAAATTCTCCTCTTCAGAATCAGAACCGAGGTCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGCATGAAGCCGGAGGATCGGAGAACAACATTTCAGGCCTTCAAATCAGAGAAGCTTGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGCTTAGATTTTCCAAATGTTAGATGTATTATTCAATATGATCCTCCAGGAGAGGCAATTGAGTATGTGCATAGGTAACTGCACTTACTTTTTGAGAAAGAAAATGCTCTCTTTATTATTTATTTCTACTTGTTGGTACTCTTCTTCTGTATTATTAGTACTCTTCTTCTAAATAAGGTGATCTTTAAATTATTTAAAAAAACCTAACACCTATATCAAGTGATCTTTCAATTATTTCCTACAAATCATGCAGTAAGTTGGTATTAATAGAGTGCACGTGTAGCTATGATATTTCACCAGCAGGGTGATGACAAAATTCCTTATTAGTTGGCTTCCGGGGCCTGCTTTATCAACTACTCAAGTCCAATTCATCTAGCATTTACATTTGTGAATATCCTGATGCAGGGTTGGAAGAACAGCTCGCTTAGGTGAAAGAGGAGATTCATTGCTATTCCTACAACCAACTGAAATAGATTATTTGCAAGATTTGCGGAATCATGGTGTATCTCTTACTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCGGTTCGTGGCAGGAAGCACTTTGTAGAGAAGTTCGTTTCTTTAGAATCACATTCCTGGATCATGTTCTTGCAGAGGGCAGTCGAATCGTTTATTGCAGCTGAGGTAGTTTTTTTCACCATCCCTCTTCGCTTTTGGTCTAATTAACAGTTTCAGAGTATAGGAGCCTCTTCTGACAAGTGCTTAATTTCATTAATATGAATGACATGTCACATTGTCTTTGCCTGGGGGAGCTTCTTTCTTTTTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGAAATTGCTATGATTTGACAATGCATTCGATCATTCTTAGAATTTTCATTTAGAGATGTTTAATATAAACACAAAGCATCAACTTCTGTTTTTTTTTTTAAGAACTCTGCATTATTGTAACCTTGATTCATGAATAACACACTTTCATGAAAAGAATTGGCTAATGATTTCATTCTCTATTTTTGTTGTTTTTTGCTTCGAAGGTACTTCACTTTTAGGTTTTATTCTAGAATCTAAAATGACATGATTTCATTTGTAGGCTTTCATTGTGGATCTGTTATGTATCAAGAATGAGTACAAATGAAATGAGTCTTTCCAATCCCTTTGCTATTATTGTTTATGTCAAAACATTGAGCCTTCTTAACTTCCTGGTTTCACCTCCAAAATCAAGACTTTAGCATTTTTTTTTTCAGGATATAATATTTTCTCCAAAAAGGGTAAGGAATGTCAATTCATGTTTCACGGGGTCCATTTTGTTTATATTTTGAATACTTCATTTTTATCTCGACATTTTTTTTTGGTAGGACCGACATAAAAATTCATATTGATTTACATTTTGAATATTAGTTTACGAGATTAAAGGCTGCCTGCTCGTTTTAATTTTGGTTGTCATAGAATCCTCATACTTGTACCCTAACAGAAAGTGGAAGCCTTGAACTAAGAAAATGTAAATTGACAATAAATAGTAAATAGGACACAAACTGTTAAGCCACATAATTATACGTTAATATAAATGTTCACTTTCCCTGGAATCAGGAACATATACTAGGACAACCTTTCATGAACATATTGTTGATATTTAGTAAATTTTTACAAAAATTGTATCAAACTTCTCAGGATGTCGTGAGTGAATATAAGCATGCATGGACTTAAATTTTTGTCCCTTATCCAGCAATTTCCTACCTTCACTCTTCATGTGGTCTGGCCTTCGATGAAAATGACTCGATCCCTCCTAAATTCTTTTTGAGTATTAATTACCTCTCATTCCTTTCGTTTTTTCTCCTCTGGAATTCAACATGTGAGTGTGAGAGTGGAAGGATTTAATCCCTGACTTCCTAACCAGTTGAGTTATGTTTATGTCTCTTTTGATGTCTTTCTATTTGTTACTTCAATTATTATAACATTCTTAGATTGTGGTCAATAATTTCTCTTTTTTATTCATATGAGGTACTTTATTGAATACTAATGAGATATCATCTATGCTTCAGCCAGGTGCAAGTCTAACAAAGAAAAAAAAAATTCATTACTCCATTTATTCTCTCTCAATGAGTGTTTTCAATTCTAACATCAGTTAACTGGTAGCCACATATTAAGCTCAACACAAGTCTTCTGGAACTCAAAGAGATCGTTCGTTCTCCTTTCTTTGCATGATAGAATGTTCTGTACACACCAAACATTCTATTGATTTTCCTGTTTTCAAGAGTAAAGAAGTAATGGACTTCCAAAAATGCACCCCAGCGTTTCAAAAGAATTATTTACTTTTTTCTGTTTTTTGTTCTTTTAGCTTTTCCTTTTTGTTATTAAATTATTTTTAGCCTTATTTCGGGATTACTTTAATATGTTTGCATTGCTTTCATCAGCCAGGAATGATGAAGTTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTAGGGCATGTAGCAAAGAGCTTTGCGTTGAAGCAACAACCGTCTGTTGTTGGAAAATCATTCAAGAAACAGGAAAAGAAAAGGAAAAGATATCCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAAATCAGTGGAAAGGGTAAGCATGGAGGGGCTTTTAGTGAATGTGCAACATAACTGTTGATTCATTTTGTTTACTTTTCTACATGGTAGCTATGTTGAATGCTGTGATTGTGAACTGTTTATCATGTCTAGGTCGCGTGCATCAATTGCAAGGCACCTCCCAAATTTTGAATTATAGTCAGTTATGTTTATCATGAGTTATGTGTATGCAACTTGTAAACGAATCTGGCCTAATTGAGTGAGTATGACTGATTGAGTAGGTATACATATTGGAGTGAAGCTTTTATTGTTTCAGCTATGTACAAGTTTTTTGCTCTGATTCATTGTTGTCTTTAATAACTGGGATTTGTGAAGCAATAAATACGTGGACCATGACTACCAAATATGAGAGTAGGTAGTCAGAGGCCCAGCAATCCACCCACCGCGCGAACGCGTAGAGGAGGTTGGGGAGTCCAAATCGAAGCACATGGGTGGTTTGAAAGCAGAAGGGGTCCAACAGGATTGGGAGCCAGCCGTACCCTATGCATTCAGGACCAGCCGAACGGAAACAGTTATATGGGATTCTCTACACTCCCACGTCAAGGTGTATTTCCCTTTCTCTTGTACCCACCACTTGGAAGGCATAAATAGGTCGATGTTAAGGCCCAATTTCGGTTACTTGGTGCATTTGCTGTCGGACACCTGGAATTGGTGCCCCCAGGGTACGATTTCATCTCTCTATTCCTCTTAACCTTCTTTAATGGCATCCTCCCTCCTCCACCTGTGTCCCCTGCAAAAACTTCGTCTCCTGCGGATATATATCCTAATTTTTTAATGTATTCTTCCAGTAATCCAGGCTCTTTTTATTTCCTGTATGTGACTCCATTCACCA

mRNA sequence

AATAAGCTGCCGTGAGAAACATTGGGGTGAAAGTTCGCCACACTCGGAACTTAGAAGCAGCCGCCCCGTAGTGCAGTCTGAGCTCCTGCGATCAATAGCAGCATCAAAGTTATGAACGAAGGGATGAAAACAACGACGAAGAAAATGGTTAAAGAGGATGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGCACGCTACTTTATGCGACGAACTCCGAGATAAAATGGGTTTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCTGGGCGTCATGTTCTTGTTAATGCGGCCACAGGCACTGGCAAAACTGTTGCGTATTTGGTTCCCATCATCCATCACTTGCAGAAGTCCGATCGTAGGATTCAGCGGGCCGATGGAACATTCTCGTTGGTTCTGGTACCAACGCGAGAGCTATGCATGCAGGTCTATGAAACTCTACAGAAATTATTACATCGTTATCATTGGATTGTCCCTGGTTACATAACAGGCGGGGAAAGCCGGTCGAAGGAGAAAGCCAGGTTGCGGAAAGGTATATCAATTTTAGTTGCAACGCCAGGTCGGCTCTTGGATCACCTAAAGAACACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGAATTTTCGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGATCATTTGGGCTCAAGGAAGAATATTGTCAATAAGGATAATGGCACTTCAAGTTTTGAATTCCCGCAGCAGAATTTGCTTTTTTCGGCCACCTTAAACGAAAAAGTAAACTGTTTTGCCAAAATTAGTTTAGAGAATCCCATTATGATTGGTCTTGATGCTGGCAACAATGCCCTTGAATTTCAACCATCTGAACATGGTCGATTTTTGGGACATGACATAAATGATGAAGCCCAGCCCACAAGGAAGGAAAAGAACTTAATTGCAGATTATAAAATACCAACCCAGTTAGTTCAGAGTTACGTGCAAGCACCGTGTGCTTCTCGGTTGGCTGTGCTTTTTTCTGTTCTGAAGTATTTGTTTGAGAGAGACTGCTTCGAGAAGACTTTGGTGCTCTTTTCAACATGTGATGCTGTAGATTTCCACTACTCCCTGTTTGGTGGATTTAAATTCTCCTCTTCAGAATCAGAACCGAGGTCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGCATGAAGCCGGAGGATCGGAGAACAACATTTCAGGCCTTCAAATCAGAGAAGCTTGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGCTTAGATTTTCCAAATGTTAGATGTATTATTCAATATGATCCTCCAGGAGAGGCAATTGAGTATGTGCATAGGGTTGGAAGAACAGCTCGCTTAGGTGAAAGAGGAGATTCATTGCTATTCCTACAACCAACTGAAATAGATTATTTGCAAGATTTGCGGAATCATGGTGTATCTCTTACTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCGGTTCGTGGCAGGAAGCACTTTGTAGAGAAGTTCGTTTCTTTAGAATCACATTCCTGGATCATGTTCTTGCAGAGGGCAGTCGAATCGTTTATTGCAGCTGAGCCAGGAATGATGAAGTTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTAGGGCATGTAGCAAAGAGCTTTGCGTTGAAGCAACAACCGTCTGTTGTTGGAAAATCATTCAAGAAACAGGAAAAGAAAAGGAAAAGATATCCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAAATCAGTGGAAAGGGTAAGCATGGAGGGGCTTTTAGTGAATGTGCAACATAACTGTTGATTCATTTTGTTTACTTTTCTACATGGTAGCTATGTTGAATGCTGTGATTGTGAACTGTTTATCATGTCTAGGTCGCGTGCATCAATTGCAAGGCACCTCCCAAATTTTGAATTATAGTCAGTTATGTTTATCATGAGTTATGTGTATGCAACTTGTAAACGAATCTGGCCTAATTGAGTGAGTATGACTGATTGAGTAGGTATACATATTGGAGTGAAGCTTTTATTGTTTCAGCTATGTACAAGTTTTTTGCTCTGATTCATTGTTGTCTTTAATAACTGGGATTTGTGAAGCAATAAATACGTGGACCATGACTACCAAATATGAGAGTAGGTAGTCAGAGGCCCAGCAATCCACCCACCGCGCGAACGCGTAGAGGAGGTTGGGGAGTCCAAATCGAAGCACATGGGTGGTTTGAAAGCAGAAGGGGTCCAACAGGATTGGGAGCCAGCCGTACCCTATGCATTCAGGACCAGCCGAACGGAAACAGTTATATGGGATTCTCTACACTCCCACGTCAAGGTGTATTTCCCTTTCTCTTGTACCCACCACTTGGAAGGCATAAATAGGTCGATGTTAAGGCCCAATTTCGGTTACTTGGTGCATTTGCTGTCGGACACCTGGAATTGGTGCCCCCAGGGTACGATTTCATCTCTCTATTCCTCTTAACCTTCTTTAATGGCATCCTCCCTCCTCCACCTGTGTCCCCTGCAAAAACTTCGTCTCCTGCGGATATATATCCTAATTTTTTAATGTATTCTTCCAGTAATCCAGGCTCTTTTTATTTCCTGTATGTGACTCCATTCACCA

Coding sequence (CDS)

ATGAACGAAGGGATGAAAACAACGACGAAGAAAATGGTTAAAGAGGATGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGCACGCTACTTTATGCGACGAACTCCGAGATAAAATGGGTTTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCTGGGCGTCATGTTCTTGTTAATGCGGCCACAGGCACTGGCAAAACTGTTGCGTATTTGGTTCCCATCATCCATCACTTGCAGAAGTCCGATCGTAGGATTCAGCGGGCCGATGGAACATTCTCGTTGGTTCTGGTACCAACGCGAGAGCTATGCATGCAGGTCTATGAAACTCTACAGAAATTATTACATCGTTATCATTGGATTGTCCCTGGTTACATAACAGGCGGGGAAAGCCGGTCGAAGGAGAAAGCCAGGTTGCGGAAAGGTATATCAATTTTAGTTGCAACGCCAGGTCGGCTCTTGGATCACCTAAAGAACACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGAATTTTCGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGATCATTTGGGCTCAAGGAAGAATATTGTCAATAAGGATAATGGCACTTCAAGTTTTGAATTCCCGCAGCAGAATTTGCTTTTTTCGGCCACCTTAAACGAAAAAGTAAACTGTTTTGCCAAAATTAGTTTAGAGAATCCCATTATGATTGGTCTTGATGCTGGCAACAATGCCCTTGAATTTCAACCATCTGAACATGGTCGATTTTTGGGACATGACATAAATGATGAAGCCCAGCCCACAAGGAAGGAAAAGAACTTAATTGCAGATTATAAAATACCAACCCAGTTAGTTCAGAGTTACGTGCAAGCACCGTGTGCTTCTCGGTTGGCTGTGCTTTTTTCTGTTCTGAAGTATTTGTTTGAGAGAGACTGCTTCGAGAAGACTTTGGTGCTCTTTTCAACATGTGATGCTGTAGATTTCCACTACTCCCTGTTTGGTGGATTTAAATTCTCCTCTTCAGAATCAGAACCGAGGTCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGCATGAAGCCGGAGGATCGGAGAACAACATTTCAGGCCTTCAAATCAGAGAAGCTTGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGCTTAGATTTTCCAAATGTTAGATGTATTATTCAATATGATCCTCCAGGAGAGGCAATTGAGTATGTGCATAGGGTTGGAAGAACAGCTCGCTTAGGTGAAAGAGGAGATTCATTGCTATTCCTACAACCAACTGAAATAGATTATTTGCAAGATTTGCGGAATCATGGTGTATCTCTTACTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCGGTTCGTGGCAGGAAGCACTTTGTAGAGAAGTTCGTTTCTTTAGAATCACATTCCTGGATCATGTTCTTGCAGAGGGCAGTCGAATCGTTTATTGCAGCTGAGCCAGGAATGATGAAGTTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTAGGGCATGTAGCAAAGAGCTTTGCGTTGAAGCAACAACCGTCTGTTGTTGGAAAATCATTCAAGAAACAGGAAAAGAAAAGGAAAAGATATCCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAA

Protein sequence

MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL

Homology

[Close]

BLAST of CmoCh05G014270 vs. ExPASy Swiss-Prot
Match: Q7XJN0 (DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana OX=3702 GN=RH17 PE=2 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 5.3e-203
Identity = 360/573 (62.83%), Postives = 439/573 (76.61%), Query Frame = 0


Query: 18  IFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAY 77
           +FASC+F+SLGL   L D+L+++MGFE PTLVQAQAIP ILSGR VLVNA TGTGKT+AY
Sbjct: 25  LFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAY 84

Query: 78  LVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGES 137
           L P+IHHLQ    ++ R+ GTF+LV+VPTRELC+QVYETL+KLLHR+HWIVPGY+ GGE 
Sbjct: 85  LAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEK 144

Query: 138 RSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEI 197
           ++KEKARLRKGISIL+ATPGRLLDHLKNT+SF++ NL W++FDEAD I ELG GKE+E+I
Sbjct: 145 KAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQI 204

Query: 198 LDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNAL 257
           +  LGS +N   +++        +QNLL SATLN+KVN  AK+SL++P+MIGLD  N  L
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLD--NTKL 264

Query: 258 EFQPS-EHGRFLGHDINDEAQPTRKEKN-LIADYKIPTQLVQSYVQAPCASRLAVLFSVL 317
           +   S E       D  D      K  N L  DY IP+QLVQ Y++ PC +RL  L SVL
Sbjct: 265 QQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVL 324

Query: 318 KYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKF--SSSESEPRSEHLFLKCKIFRLHGS 377
           K LFER+  +K +V FST DAVDFHYSL   F++  +S   E  ++ LFLKCK FRLHGS
Sbjct: 325 KNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGS 384

Query: 378 MKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTAR 437
           M+ EDRR+ F  FK+EK A+LLSTD+AARGLDFP VRCIIQYD PGEA EYVHRVGRTAR
Sbjct: 385 MEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 444

Query: 438 LGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVSLESHS 497
           +GE+G++LLFLQP EIDYL++L+ HG SLTEYPL+KVLD FP+ G    ++K +SLESH 
Sbjct: 445 IGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKFPIPGNMPRIKKVLSLESHP 504

Query: 498 WIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFA 557
           W++ LQRA+ES   AEP M  LA+ AF SWVR Y AH+GELK IFVVKKLHLGHVAKSFA
Sbjct: 505 WVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFA 564

Query: 558 LKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           L++QPS+VGKS  K+  KRKR  +Q     KKR
Sbjct: 565 LREQPSLVGKSHHKETMKRKRDERQKGQQGKKR 595

[Close]

BLAST of CmoCh05G014270 vs. ExPASy Swiss-Prot
Match: Q0DLB9 (DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=RH17 PE=2 SV=2)

HSP 1 Score: 696.4 bits (1796), Expect = 2.7e-199
Identity = 345/587 (58.77%), Postives = 446/587 (75.98%), Query Frame = 0


Query: 6   KTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLV 65
           K+   K   ++ +FASC+F  LGLH TLC  L+DKMGF+ PT +QAQAIP  +SG+H+LV
Sbjct: 7   KSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLV 66

Query: 66  NAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYH 125
            AATGTGKT+AYL PI+H LQ  + R++R DGTF+LVLVPTRELC+QVY   Q+L+HR+H
Sbjct: 67  KAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFH 126

Query: 126 WIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRI 185
           W+VPGYI GGE+R+KEKARLRKGISIL+ATPGRLLDHL++TSSF+Y N+ WIVFDEAD I
Sbjct: 127 WLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSI 186

Query: 186 FELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENP 245
            ELG GK +E+IL+HLGSR +  N+ N        +QNLL SATLNEKVN  AKISL+NP
Sbjct: 187 LELGFGKALEDILEHLGSRNDTSNQ-NKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNP 246

Query: 246 IMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-----IADYKIPTQLVQSYV 305
           +MIGLD  N+      S HG+     ++D+ +   ++ N+     + D+K+P QLVQ YV
Sbjct: 247 VMIGLDEQNS------SAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYV 306

Query: 306 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSS-ESEPRSE 365
           +  C SRLA+L ++LK LFER    K +V  STCD+VDFH+++    ++S   + +   +
Sbjct: 307 KVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKK 366

Query: 366 HLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPG 425
             F+ CK+FRLHG+M  +DR+ +F  F SEK A+L+STD+AARGLDFP V+CIIQYD PG
Sbjct: 367 QKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPG 426

Query: 426 EAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGR 485
           EA EYVHRVGRTAR+GE+G++LLFLQP E DYL+DL  HG SLTEYPL KVLDSFPV G+
Sbjct: 427 EASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQ 486

Query: 486 KHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 545
           +    K +SL+ H WIM LQRA+ESF+ +E    KLA+ AFCSWVRAYTAHRGELK+IF+
Sbjct: 487 RLHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFM 546

Query: 546 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           VKKLHLGHVA+SF LK+QPS++G+S + Q KKRK+  K++  + +++
Sbjct: 547 VKKLHLGHVARSFGLKEQPSLLGRSHQVQLKKRKKEQKRERPAKRRK 586

[Close]

BLAST of CmoCh05G014270 vs. ExPASy Swiss-Prot
Match: Q9H8H2 (Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens OX=9606 GN=DDX31 PE=1 SV=2)

HSP 1 Score: 393.3 bits (1009), Expect = 4.9e-108
Identity = 235/589 (39.90%), Postives = 336/589 (57.05%), Query Frame = 0


Query: 15  EDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKT 74
           ++++F S  F  LGLH  L   +   +     T VQ Q+IP +L GR  LV + TG+GKT
Sbjct: 223 QEKVFTSAAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKT 282

Query: 75  VAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITG 134
           +AY +P++  LQ  + +IQR+DG ++LVLVPTREL +Q ++T+QKLL  + WIVPG + G
Sbjct: 283 LAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMG 342

Query: 135 GESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEV 194
           GE R  EKARLRKGI+IL++TPGRL+DH+K+T +  +S L W+VFDEADRI +LG  K++
Sbjct: 343 GEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDI 402

Query: 195 EEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIG-LDAG 254
             IL       N VN +         +QN+L SATL E V   A ISL +P+ I  LD  
Sbjct: 403 TVIL-------NAVNAECQ------KRQNVLLSATLTEGVTRLADISLHDPVSISVLDKS 462

Query: 255 NNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVL-- 314
           ++ L   P +        + +   P   +K  +  + IP  L Q     P   RL  L  
Sbjct: 463 HDQL--NPKDKA------VQEVCPPPAGDK--LDSFAIPESLKQHVTVVPSKLRLVCLAA 522

Query: 315 FSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEHL---FLKCKIF 374
           F + K  FE D  +K +V FS+C+ V+FHYSLF     SSS   P S  L    ++ K  
Sbjct: 523 FILQKCKFEED--QKMVVFFSSCELVEFHYSLFLQTLLSSS-GAPASGQLPSASMRLKFL 582

Query: 375 RLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRV 434
           RLHG M+ E+R   FQ F   +  +LL TD+AARGLD P V  I+QY+ P    EY+HR+
Sbjct: 583 RLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRI 642

Query: 435 GRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVL------DSFPVRGRKHF 494
           GRTAR+G  G SLL L P+E +Y+  L +H ++++E  +  +L      D F  +G++  
Sbjct: 643 GRTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCF--KGKRWG 702

Query: 495 VEKFVSL---ESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 554
            +K  ++   E       LQ   E ++ +    +  A+KA  S+++AY  +  ELK IF 
Sbjct: 703 AQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFH 762

Query: 555 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           V+ LHLGHVAKSF L+  P  +    +K+ K   + P     +  K +L
Sbjct: 763 VRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDLHKKTQSKHSL 783

[Close]

BLAST of CmoCh05G014270 vs. ExPASy Swiss-Prot
Match: Q6NZQ2 (Probable ATP-dependent RNA helicase DDX31 OS=Mus musculus OX=10090 GN=Ddx31 PE=2 SV=2)

HSP 1 Score: 377.5 bits (968), Expect = 2.8e-103
Identity = 233/589 (39.56%), Postives = 325/589 (55.18%), Query Frame = 0


Query: 5   MKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVL 64
           + +T  K  +E ++F+   F  L LH  L   +   +     T VQ Q+IP +L GR  L
Sbjct: 87  LHSTVVKQARE-QVFSPEAFQELDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDAL 146

Query: 65  VNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRY 124
           V + TG+GKT+AY VP++  LQ    +IQR+DG ++LVLVPTREL +Q ++T+QKLL  +
Sbjct: 147 VRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPF 206

Query: 125 HWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADR 184
            WIVPG + GGE R  EKARLRKGI+IL++TPGRL+DH+K+T +  ++ + W++ DEADR
Sbjct: 207 TWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNLHFNRIRWLIVDEADR 266

Query: 185 IFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLEN 244
           I +LG  K++  IL       N VN +         +QN+L SATL E V     ISL N
Sbjct: 267 ILDLGFEKDITVIL-------NAVNAECQ------KRQNVLLSATLTEGVTRLVDISLHN 326

Query: 245 PIMIG-LDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIA--DYKIPTQLVQSYVQ 304
           P+ I  LD   N                     QP  KE   I    + IP  L Q  V 
Sbjct: 327 PVSISVLDKNCN---------------------QPNPKEVASIQLNSFAIPESLDQHVVL 386

Query: 305 APCASRLAVL--FSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSE 364
            P   RL  L  F + K  FE++  +K +V FS+C+ V+FHYSLF       S   P SE
Sbjct: 387 VPSKLRLVCLAAFILQKCKFEKN--QKMIVFFSSCELVEFHYSLFLHTLLCHS-GTPTSE 446

Query: 365 HL---FLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYD 424
           HL       K  RLHG+M+ E+R + F  F   +  +LL TD+A+RGLD P V  I+QY 
Sbjct: 447 HLPSASWPLKFLRLHGNMEQEERTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYS 506

Query: 425 PPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVL----- 484
            P    EY+HR+GRTAR+G  G SLL L P+E +Y+  L +H +++ E  +  +L     
Sbjct: 507 APSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAK 566

Query: 485 -DSFPVRGRKHFVEKFVS-LESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTA 544
            D F  R R     +     E       LQ   E ++ +   M+  A+KA  S++RAY  
Sbjct: 567 DDCFKRRQRGAQKSRASGPQEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYAT 626

Query: 545 HRGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQ 579
           +  ELK IF V+ LHLGHVAKSF L+  P  +  S  K+   ++ +P++
Sbjct: 627 YPKELKSIFHVRALHLGHVAKSFGLRDAPRNLSVSAVKKASLKRPHPRR 637

[Close]

BLAST of CmoCh05G014270 vs. ExPASy Swiss-Prot
Match: Q869P0 (Probable ATP-dependent RNA helicase ddx31 OS=Dictyostelium discoideum OX=44689 GN=ddx31 PE=3 SV=2)

HSP 1 Score: 362.5 bits (929), Expect = 9.3e-99
Identity = 231/659 (35.05%), Postives = 340/659 (51.59%), Query Frame = 0


Query: 13  VKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTG 72
           V++ E F+S  + SL L  TL   L   M  E PT +Q  +I  IL G   LV A TG+G
Sbjct: 198 VEKSETFSSMNWGSLQLSETLVRNLVGHMKHEKPTHIQEASITPILKGNDALVKAQTGSG 257

Query: 73  KTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYI 132
           KT++YL+P++  L  +++R+ R+DG + +++ PTREL  Q+YE LQKLL  ++WIVPG I
Sbjct: 258 KTLSYLIPVVQKL--TEQRVTRSDGCYCVIITPTRELSSQIYEELQKLLKPFYWIVPGII 317

Query: 133 TGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGK 192
            GGE+RS EKAR+RKGI+ILVATPGRLLDHL+NT SF   N+ W + DEAD++ +LG  K
Sbjct: 318 MGGENRSAEKARIRKGINILVATPGRLLDHLQNTQSFPTDNIKWCILDEADKLLDLGFEK 377

Query: 193 EVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDA 252
           +V  I++ L S+K          + +F +QN+L SATL+E ++  A +SL +P+ IGLD+
Sbjct: 378 DVTTIINLLDSKKR---------TMKFKRQNILVSATLSEGISRLASLSLTSPVYIGLDS 437

Query: 253 GNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLF 312
                  +  E G        +  Q   KE       + P QL Q YV+     RL  L 
Sbjct: 438 -------KVLEKG-------ENPFQAAEKEM-----LQAPKQLDQFYVEVESKERLTSLI 497

Query: 313 SVLKYLFERDCFE-------------KTLVLFSTCDAVDFHYSLFGGFKF---------- 372
           + +++       +             K +V FS+CD+VDFH+ +F   K           
Sbjct: 498 AFIRWKTSNITIDKGDVASGNSSANSKMIVFFSSCDSVDFHHYMFSNMKMDKERGVKRTK 557

Query: 373 ------------------------------------------SSSESEPRSEHLFLK--- 432
                                                     ++S+SE   E    K   
Sbjct: 558 KEQIKQDKLIQQHKQKNSKIFQTGNESDDEESDNDDSDDSDSNNSDSETDEEKEIEKQIK 617

Query: 433 ----------------CKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPN 492
                             IF+LHG +  + R  TF  FK+    +LL+TD++ARGLD P+
Sbjct: 618 EATSNPNYRVKTSVFSVPIFKLHGELDQQTRTKTFFDFKNSPNGILLTTDVSARGLDLPS 677

Query: 493 VRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLV 552
           V  I+QYDP  +  +Y+HR+GRTARLG +G SLLFL P+E  Y+  L    VS+ E  + 
Sbjct: 678 VNWIVQYDPCSDTKDYIHRIGRTARLGNQGCSLLFLLPSEKKYIDHLAKFNVSVKEMKVT 737

Query: 553 KVLDSFPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYT 588
            +L S          +   S +  S +  LQ   E F+  +    ++A+ A+ S++R+Y 
Sbjct: 738 TILQSLFYTSDGQLKKTSKSSQLESQVHDLQLLFERFLIYDSKAKEMARCAYQSFLRSYA 797

[Close]

BLAST of CmoCh05G014270 vs. ExPASy TrEMBL
Match: A0A6J1G427 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450551 PE=3 SV=1)

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 588/588 (100.00%), Postives = 588/588 (100.00%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG
Sbjct: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240
           EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240

Query: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300
           SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV
Sbjct: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300

Query: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360
           QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH
Sbjct: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360

Query: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420
           LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE
Sbjct: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420

Query: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480
           AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK
Sbjct: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480

Query: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV 540
           HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV
Sbjct: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV 540

Query: 541 KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL
Sbjct: 541 KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 588

[Close]

BLAST of CmoCh05G014270 vs. ExPASy TrEMBL
Match: A0A6J1IGD1 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474473 PE=3 SV=1)

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 579/588 (98.47%), Postives = 579/588 (98.47%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           MNE MKTTTKKMVKEDEIFASCTFASLGLH TLCDELRDKMGFEVPTLVQAQAIPAILSG
Sbjct: 1   MNEVMKTTTKKMVKEDEIFASCTFASLGLHTTLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240
           EADRIFELGCGKEVEEILDHLGS KNIVNKDNGTSSFEFPQQNLLFSATLNEKV CFAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSGKNIVNKDNGTSSFEFPQQNLLFSATLNEKVICFAKI 240

Query: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300
           SLENPIMIGLD GNNALEFQPSEHGRFLGHDINDEAQPTRKEK LIADYKIPTQLVQSYV
Sbjct: 241 SLENPIMIGLDGGNNALEFQPSEHGRFLGHDINDEAQPTRKEKKLIADYKIPTQLVQSYV 300

Query: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360
           QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH
Sbjct: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360

Query: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420
           LFL CKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE
Sbjct: 361 LFLNCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420

Query: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480
           AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFP RGRK
Sbjct: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPARGRK 480

Query: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV 540
           HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV
Sbjct: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV 540

Query: 541 KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR L
Sbjct: 541 KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRNL 588

[Close]

BLAST of CmoCh05G014270 vs. ExPASy TrEMBL
Match: A0A1S3CB30 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498955 PE=3 SV=1)

HSP 1 Score: 1060.1 bits (2740), Expect = 3.4e-306
Identity = 540/590 (91.53%), Postives = 554/590 (93.90%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           +NEG+KTT KKMVKE EIFASCTFASLGL  TLCD+LRDKMGFEVPTLVQAQAIPAILS 
Sbjct: 8   INEGVKTTAKKMVKEGEIFASCTFASLGLDPTLCDQLRDKMGFEVPTLVQAQAIPAILSR 67

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKS RR QRADGTF+LVLVPTRELCMQVYE+LQKL
Sbjct: 68  RHVLVNAATGTGKTVAYLVPIIHHLQKSTRRTQRADGTFALVLVPTRELCMQVYESLQKL 127

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           L RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 128 LQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 187

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSATLNEKVNCFAK 240
           EADRIFELGCGKEVEEILDHLGSR+NI V KDN  SSF FPQQNLLFSATLNEKV  FAK
Sbjct: 188 EADRIFELGCGKEVEEILDHLGSRRNIHVKKDNAISSFGFPQQNLLFSATLNEKVIHFAK 247

Query: 241 ISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLVQS 300
           ISLENPIMIGLDAG++ALEFQPSE GRFLG DINDE QP RKEK+  IADYKIPTQLVQS
Sbjct: 248 ISLENPIMIGLDAGDSALEFQPSERGRFLGQDINDEVQPIRKEKSFSIADYKIPTQLVQS 307

Query: 301 YVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRS 360
           YVQAPC SRL VLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFG FKFSSSESE R 
Sbjct: 308 YVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRP 367

Query: 361 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPP 420
           EHLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPP
Sbjct: 368 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPP 427

Query: 421 GEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRG 480
           GEAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSLTEYPLVKVLDSFP RG
Sbjct: 428 GEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVLDSFPARG 487

Query: 481 RKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF 540
           RK FVEK VSLESHSWIMFLQRAVESF+AAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF
Sbjct: 488 RKQFVEKLVSLESHSWIMFLQRAVESFVAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF 547

Query: 541 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           VVKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  +QDVSSSKKRTL
Sbjct: 548 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSRQDVSSSKKRTL 597

[Close]

BLAST of CmoCh05G014270 vs. ExPASy TrEMBL
Match: A0A6J1G419 (DEAD-box ATP-dependent RNA helicase 17 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450551 PE=3 SV=1)

HSP 1 Score: 1028.1 bits (2657), Expect = 1.5e-296
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG
Sbjct: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240
           EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240

Query: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300
           SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV
Sbjct: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300

Query: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360
           QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH
Sbjct: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360

Query: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420
           LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE
Sbjct: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420

Query: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480
           AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK
Sbjct: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480

Query: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAE 510
           HFVEKFVSLESHSWIMFLQRAVESFIAAE
Sbjct: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAE 509

[Close]

BLAST of CmoCh05G014270 vs. ExPASy TrEMBL
Match: A0A6J1DL75 (DEAD-box ATP-dependent RNA helicase 17 OS=Momordica charantia OX=3673 GN=LOC111021936 PE=3 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 1.3e-292
Identity = 513/591 (86.80%), Postives = 543/591 (91.88%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           MNE +KTT KKM +E EIFASCTF+SLGLH+TLCD+L++KMGFEVPTLVQAQAI AILSG
Sbjct: 8   MNEEVKTTKKKMGRESEIFASCTFSSLGLHSTLCDQLQEKMGFEVPTLVQAQAIRAILSG 67

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHV+VNAATGTGKT+AYLVPIIHHLQKS RRIQRADGTF+LVLVPTRELCMQVYET+QKL
Sbjct: 68  RHVIVNAATGTGKTIAYLVPIIHHLQKSGRRIQRADGTFALVLVPTRELCMQVYETIQKL 127

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           +HRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 128 IHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 187

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSATLNEKVNCFAK 240
           EADRIFELGCGKEVEEILDHLGSRKNI VNK++  S+F+FP+QNLL SATLNE +N FAK
Sbjct: 188 EADRIFELGCGKEVEEILDHLGSRKNIYVNKEDAASNFDFPRQNLLLSATLNENINRFAK 247

Query: 241 ISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLVQS 300
           ISLENPI+IGLD GN+ALEFQP E GRFL HDI DEA+PT K ++  I DYKIPTQLVQS
Sbjct: 248 ISLENPIVIGLDGGNDALEFQPFERGRFLRHDITDEAEPTGKRESFSIGDYKIPTQLVQS 307

Query: 301 YVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFS-SSESEPR 360
           YVQ PC SRL VLFSVLKYLFE + FEK LVLFSTCDAVDFHYSLFG FK S S ESE R
Sbjct: 308 YVQVPCGSRLPVLFSVLKYLFEGESFEKILVLFSTCDAVDFHYSLFGDFKLSPSPESEMR 367

Query: 361 SEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDP 420
            + +FLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFP VRCIIQYDP
Sbjct: 368 LKQMFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPKVRCIIQYDP 427

Query: 421 PGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVR 480
           PGEAIEYVHRVGRTARLGE+GDSLLFLQPTEIDYLQDL+NHGV LTEYPLVKVLDSFPV 
Sbjct: 428 PGEAIEYVHRVGRTARLGEKGDSLLFLQPTEIDYLQDLQNHGVCLTEYPLVKVLDSFPVH 487

Query: 481 GRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRI 540
           GRK  VEKFV LESH WIMFLQ+AVESF+ AEP MMKLAQKAFCSWV AYTAHRGELKRI
Sbjct: 488 GRKQSVEKFVPLESHFWIMFLQKAVESFVVAEPEMMKLAQKAFCSWVCAYTAHRGELKRI 547

Query: 541 FVVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           FVVKKLHLGHVAKSFALKQQPS VGKSFKKQ KKRKR PKQDVSSSKKRTL
Sbjct: 548 FVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRNPKQDVSSSKKRTL 598

[Close]

BLAST of CmoCh05G014270 vs. NCBI nr
Match: XP_022946513.1 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita moschata] >XP_023546293.1 DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 588/588 (100.00%), Postives = 588/588 (100.00%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG
Sbjct: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240
           EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240

Query: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300
           SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV
Sbjct: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300

Query: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360
           QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH
Sbjct: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360

Query: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420
           LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE
Sbjct: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420

Query: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480
           AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK
Sbjct: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480

Query: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV 540
           HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV
Sbjct: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV 540

Query: 541 KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL
Sbjct: 541 KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 588

[Close]

BLAST of CmoCh05G014270 vs. NCBI nr
Match: XP_022975310.1 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 579/588 (98.47%), Postives = 579/588 (98.47%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           MNE MKTTTKKMVKEDEIFASCTFASLGLH TLCDELRDKMGFEVPTLVQAQAIPAILSG
Sbjct: 1   MNEVMKTTTKKMVKEDEIFASCTFASLGLHTTLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240
           EADRIFELGCGKEVEEILDHLGS KNIVNKDNGTSSFEFPQQNLLFSATLNEKV CFAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSGKNIVNKDNGTSSFEFPQQNLLFSATLNEKVICFAKI 240

Query: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300
           SLENPIMIGLD GNNALEFQPSEHGRFLGHDINDEAQPTRKEK LIADYKIPTQLVQSYV
Sbjct: 241 SLENPIMIGLDGGNNALEFQPSEHGRFLGHDINDEAQPTRKEKKLIADYKIPTQLVQSYV 300

Query: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360
           QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH
Sbjct: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360

Query: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420
           LFL CKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE
Sbjct: 361 LFLNCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420

Query: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480
           AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFP RGRK
Sbjct: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPARGRK 480

Query: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV 540
           HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV
Sbjct: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVV 540

Query: 541 KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR L
Sbjct: 541 KKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRNL 588

[Close]

BLAST of CmoCh05G014270 vs. NCBI nr
Match: XP_008460014.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucumis melo])

HSP 1 Score: 1060.1 bits (2740), Expect = 7.1e-306
Identity = 540/590 (91.53%), Postives = 554/590 (93.90%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           +NEG+KTT KKMVKE EIFASCTFASLGL  TLCD+LRDKMGFEVPTLVQAQAIPAILS 
Sbjct: 8   INEGVKTTAKKMVKEGEIFASCTFASLGLDPTLCDQLRDKMGFEVPTLVQAQAIPAILSR 67

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKS RR QRADGTF+LVLVPTRELCMQVYE+LQKL
Sbjct: 68  RHVLVNAATGTGKTVAYLVPIIHHLQKSTRRTQRADGTFALVLVPTRELCMQVYESLQKL 127

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           L RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 128 LQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 187

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSATLNEKVNCFAK 240
           EADRIFELGCGKEVEEILDHLGSR+NI V KDN  SSF FPQQNLLFSATLNEKV  FAK
Sbjct: 188 EADRIFELGCGKEVEEILDHLGSRRNIHVKKDNAISSFGFPQQNLLFSATLNEKVIHFAK 247

Query: 241 ISLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLVQS 300
           ISLENPIMIGLDAG++ALEFQPSE GRFLG DINDE QP RKEK+  IADYKIPTQLVQS
Sbjct: 248 ISLENPIMIGLDAGDSALEFQPSERGRFLGQDINDEVQPIRKEKSFSIADYKIPTQLVQS 307

Query: 301 YVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRS 360
           YVQAPC SRL VLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFG FKFSSSESE R 
Sbjct: 308 YVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRP 367

Query: 361 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPP 420
           EHLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPP
Sbjct: 368 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPP 427

Query: 421 GEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRG 480
           GEAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSLTEYPLVKVLDSFP RG
Sbjct: 428 GEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVLDSFPARG 487

Query: 481 RKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF 540
           RK FVEK VSLESHSWIMFLQRAVESF+AAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF
Sbjct: 488 RKQFVEKLVSLESHSWIMFLQRAVESFVAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIF 547

Query: 541 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           VVKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  +QDVSSSKKRTL
Sbjct: 548 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSRQDVSSSKKRTL 597

[Close]

BLAST of CmoCh05G014270 vs. NCBI nr
Match: XP_004141076.1 (DEAD-box ATP-dependent RNA helicase 17 [Cucumis sativus] >KGN60526.2 hypothetical protein Csa_019328 [Cucumis sativus])

HSP 1 Score: 1059.7 bits (2739), Expect = 9.3e-306
Identity = 541/589 (91.85%), Postives = 554/589 (94.06%), Query Frame = 0


Query: 2   NEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGR 61
           NEG+KTTTKKMVKE E+FASCTFASLGL +TLCD+LRDKMGFEVPTLVQAQAIPAILS R
Sbjct: 9   NEGVKTTTKKMVKEGEVFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRR 68

Query: 62  HVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLL 121
           HVLVNAATGTGKTVAYLVPIIHHLQKS RR QRADGTF+LVLVPTRELCMQVYE+LQKLL
Sbjct: 69  HVLVNAATGTGKTVAYLVPIIHHLQKSARRTQRADGTFALVLVPTRELCMQVYESLQKLL 128

Query: 122 HRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDE 181
            RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDE
Sbjct: 129 QRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDE 188

Query: 182 ADRIFELGCGKEVEEILDHLGSRKNI-VNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 241
           ADRIFELGCGKEVEEILDHLGSRKNI VNKDN  SSF FPQQNLLFSATLNEKV  FAKI
Sbjct: 189 ADRIFELGCGKEVEEILDHLGSRKNIHVNKDNAISSFGFPQQNLLFSATLNEKVTHFAKI 248

Query: 242 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLVQSY 301
           SLENPIMIGLDAGN+ALEFQP+E GRFL HDINDE  P +KE N  IADYKIP+QLVQSY
Sbjct: 249 SLENPIMIGLDAGNSALEFQPTERGRFLEHDINDEVHPIQKENNFSIADYKIPSQLVQSY 308

Query: 302 VQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSE 361
           VQAPC SRL VLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFGGFKF SSESE R E
Sbjct: 309 VQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGGFKF-SSESESRPE 368

Query: 362 HLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPG 421
           HLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPPG
Sbjct: 369 HLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPG 428

Query: 422 EAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGR 481
           EAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSLTEYPLVKVLDSFPVRGR
Sbjct: 429 EAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVLDSFPVRGR 488

Query: 482 KHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 541
           K FVEK VSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRG LKRIFV
Sbjct: 489 KQFVEKLVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGALKRIFV 548

Query: 542 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 589
           VKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  KQDVSSSKKRTL
Sbjct: 549 VKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 596

[Close]

BLAST of CmoCh05G014270 vs. NCBI nr
Match: XP_022946514.1 (DEAD-box ATP-dependent RNA helicase 17 isoform X2 [Cucurbita moschata] >XP_023546294.1 DEAD-box ATP-dependent RNA helicase 17 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1028.1 bits (2657), Expect = 3.0e-296
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0


Query: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60
           MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG
Sbjct: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120
           RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180
           LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240
           EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240

Query: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300
           SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV
Sbjct: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYV 300

Query: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360
           QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH
Sbjct: 301 QAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEH 360

Query: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420
           LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE
Sbjct: 361 LFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGE 420

Query: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480
           AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK
Sbjct: 421 AIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRK 480

Query: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAE 510
           HFVEKFVSLESHSWIMFLQRAVESFIAAE
Sbjct: 481 HFVEKFVSLESHSWIMFLQRAVESFIAAE 509

[Close]

BLAST of CmoCh05G014270 vs. TAIR 10
Match: AT2G40700.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 708.8 bits (1828), Expect = 3.8e-204
Identity = 360/573 (62.83%), Postives = 439/573 (76.61%), Query Frame = 0


Query: 18  IFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAY 77
           +FASC+F+SLGL   L D+L+++MGFE PTLVQAQAIP ILSGR VLVNA TGTGKT+AY
Sbjct: 25  LFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAY 84

Query: 78  LVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGES 137
           L P+IHHLQ    ++ R+ GTF+LV+VPTRELC+QVYETL+KLLHR+HWIVPGY+ GGE 
Sbjct: 85  LAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEK 144

Query: 138 RSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEI 197
           ++KEKARLRKGISIL+ATPGRLLDHLKNT+SF++ NL W++FDEAD I ELG GKE+E+I
Sbjct: 145 KAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQI 204

Query: 198 LDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNAL 257
           +  LGS +N   +++        +QNLL SATLN+KVN  AK+SL++P+MIGLD  N  L
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLD--NTKL 264

Query: 258 EFQPS-EHGRFLGHDINDEAQPTRKEKN-LIADYKIPTQLVQSYVQAPCASRLAVLFSVL 317
           +   S E       D  D      K  N L  DY IP+QLVQ Y++ PC +RL  L SVL
Sbjct: 265 QQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVL 324

Query: 318 KYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKF--SSSESEPRSEHLFLKCKIFRLHGS 377
           K LFER+  +K +V FST DAVDFHYSL   F++  +S   E  ++ LFLKCK FRLHGS
Sbjct: 325 KNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGS 384

Query: 378 MKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTAR 437
           M+ EDRR+ F  FK+EK A+LLSTD+AARGLDFP VRCIIQYD PGEA EYVHRVGRTAR
Sbjct: 385 MEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 444

Query: 438 LGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVSLESHS 497
           +GE+G++LLFLQP EIDYL++L+ HG SLTEYPL+KVLD FP+ G    ++K +SLESH 
Sbjct: 445 IGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKFPIPGNMPRIKKVLSLESHP 504

Query: 498 WIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFA 557
           W++ LQRA+ES   AEP M  LA+ AF SWVR Y AH+GELK IFVVKKLHLGHVAKSFA
Sbjct: 505 WVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFA 564

Query: 558 LKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKR 587
           L++QPS+VGKS  K+  KRKR  +Q     KKR
Sbjct: 565 LREQPSLVGKSHHKETMKRKRDERQKGQQGKKR 595

[Close]

BLAST of CmoCh05G014270 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 269.2 bits (687), Expect = 7.6e-72
Identity = 187/555 (33.69%), Postives = 280/555 (50.45%), Query Frame = 0


Query: 10  KKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAAT 69
           +K ++E  I  + TF SL L       +++ MGF   T +QA+AIP ++ G  VL  A T
Sbjct: 142 EKKLEETSIMTNKTFESLSLSDNTYKSIKE-MGFARMTQIQAKAIPPLMMGEDVLGAART 201

Query: 70  GTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVP 129
           G+GKT+A+L+P +  L +   +    +GT  LV+ PTREL +Q Y   ++LL +YH    
Sbjct: 202 GSGKTLAFLIPAVELLYRV--KFTPRNGTGVLVICPTRELAIQSYGVAKELL-KYHSQTV 261

Query: 130 GYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELG 189
           G + GGE R  E   L KG+++LVATPGRLLDHL+NT+ F++ NL ++V DEADRI E  
Sbjct: 262 GKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQN 321

Query: 190 CGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIG 249
             +++++IL       N++ K   TS         LFSAT + KV   A++SL +P+ I 
Sbjct: 322 FEEDLKKIL-------NLLPKTRQTS---------LFSATQSAKVEDLARVSLTSPVYID 381

Query: 250 LDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLA 309
           +D G                 ++ +E                   L Q Y   P A RL 
Sbjct: 382 VDEGRK---------------EVTNEG------------------LEQGYCVVPSAMRLL 441

Query: 310 VLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFR 369
            L + LK    +   +K +V FSTC +  FH  LF   KF   E                
Sbjct: 442 FLLTFLKRFQGK---KKIMVFFSTCKSTKFHAELFRYIKFDCLE---------------- 501

Query: 370 LHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVG 429
           + G +    R  TF  F   +  +LL T++AARGLDFP+V  I+QYDPP    +Y+HRVG
Sbjct: 502 IRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVG 561

Query: 430 RTAR-LGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVS 489
           RTAR  G +G +LL L P E+ ++Q L+   + + E+                F EK   
Sbjct: 562 RTARGEGAKGKALLVLTPQELKFIQYLKAAKIPVEEH---------------EFEEK--- 599

Query: 490 LESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHV 549
                 ++ ++  VE+ I+    + + A++A+ +++  Y +H   +K +F V +L+L  V
Sbjct: 622 -----KLLDVKPFVENLISENYALKESAKEAYKTYISGYDSH--SMKDVFNVHQLNLTEV 599

Query: 550 AKSFALKQQPSVVGK 564
           A SF     P V  K
Sbjct: 682 ATSFGFSDPPKVALK 599

[Close]

BLAST of CmoCh05G014270 vs. TAIR 10
Match: AT3G18600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 253.1 bits (645), Expect = 5.6e-67
Identity = 191/568 (33.63%), Postives = 276/568 (48.59%), Query Frame = 0


Query: 18  IFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAY 77
           I  + TF SL L       +++ MGF+  T +QA +I  +L G+ VL  A TG+GKT+A+
Sbjct: 85  IMTNVTFDSLDLSEQTSIAIKE-MGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAF 144

Query: 78  LVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGES 137
           L+P +  L K   R    +GT  +V+ PTREL +Q     ++LL ++H      + GG +
Sbjct: 145 LIPAVELLFK--ERFSPRNGTGVIVICPTRELAIQTKNVAEELL-KHHSQTVSMVIGGNN 204

Query: 138 RSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEI 197
           R  E  R+  G ++++ATPGRLLDHL+NT +F+Y +L  +V DEADRI E    +++ +I
Sbjct: 205 RRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKI 264

Query: 198 LDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNAL 257
           L  L   +                Q  LFSAT   KV   A++SL +P+ + +D G    
Sbjct: 265 LKILPKTR----------------QTALFSATQTSKVKDLARVSLTSPVHVDVDDGR--- 324

Query: 258 EFQPSEHGRFLGHDINDEAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLFSVLKY 317
                                 RK  N          L Q Y   P   RL +L S LK 
Sbjct: 325 ----------------------RKVTN--------EGLEQGYCVVPSKQRLILLISFLK- 384

Query: 318 LFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFRLHGSMKPE 377
              ++  +K +V FSTC +V FH  +    K S  +             +  +HG M   
Sbjct: 385 ---KNLNKKIMVFFSTCKSVQFHTEI---MKISDVD-------------VSDIHGGMDQN 444

Query: 378 DRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTAR-LGE 437
            R  TF  F   K  +LL TD+AARGLD P+V  IIQYDPP +  EY+HRVGRTAR  G 
Sbjct: 445 RRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGA 504

Query: 438 RGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGRKHFVEKFVSLESHSWIM 497
           +G +LL L P E+ +++ L+   V + E                 F EK +S        
Sbjct: 505 KGKALLVLIPEELQFIRYLKAAKVPVKEL---------------EFNEKRLS-------- 554

Query: 498 FLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQ 557
            +Q A+E  +A +  + KLA+ A+ +++ AY +H   LK IF V +L L  VA+SF    
Sbjct: 565 NVQSALEKCVAKDYNLNKLAKDAYRAYLSAYNSH--SLKDIFNVHRLDLLAVAESFCFSS 554

Query: 558 QPSV---VGKSFKKQEKKRKRYPKQDVS 582
            P V   +     K  K RK+  +   S
Sbjct: 625 PPKVNLNIESGAGKVRKARKQQGRNGFS 554

[Close]

BLAST of CmoCh05G014270 vs. TAIR 10
Match: AT5G05450.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 199.5 bits (506), Expect = 7.4e-51
Identity = 147/527 (27.89%), Postives = 234/527 (44.40%), Query Frame = 0


Query: 36  ELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRA 95
           E  ++  FE  T VQA  IP + S + V V+AATG+GKT+A++VP++  L++S     + 
Sbjct: 29  EALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKP 88

Query: 96  DGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGG-ESRSKEKARLRKGISILVA 155
                +++ PTREL  Q+Y   Q  +     +    + GG E ++  K    +G ++L+ 
Sbjct: 89  HQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIG 148

Query: 156 TPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIVNKDNGT 215
           TPGRL D ++      + NL  ++ DEADR+ E+G  ++V  I+  L  ++         
Sbjct: 149 TPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQR--------- 208

Query: 216 SSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDIND 275
                  +  LFSAT  E V   AK  L NP+ + +                        
Sbjct: 209 -------RTGLFSATQTEGVEELAKAGLRNPVRVEV------------------------ 268

Query: 276 EAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTC 335
            A+   +    + + K P+ L   Y++     + + L  +L     ++  +K +V F TC
Sbjct: 269 RAKSKSESSQQLTNSKTPSGLHLEYMECEADKKSSQLVDLL----IKNSDKKLIVFFMTC 328

Query: 336 DAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALL 395
            +VD+   +        S S            +  +HG MK   R     +F       L
Sbjct: 329 ASVDYWGLVLSKIPALKSIS------------LIPIHGDMKQNARDKALASFTKASSGAL 388

Query: 396 LSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQD 455
           L TD+AARGLD P +  ++QYDPP +   + HR GRTARLG +G +++FL P E  Y++ 
Sbjct: 389 LCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLLPKEEAYVEF 448

Query: 456 LRNHGVSLTEYPLVK-VLDSFPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMM 515
           +R   V L E    +   D  P+                         + S    +  +M
Sbjct: 449 MRIRRVPLEERKCSEDASDVIPI-------------------------IRSAAMKDRAVM 472

Query: 516 KLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSV 561
           +   KAF S+VRAY  H      IF  K L +G +A  + L   PS+
Sbjct: 509 EKGLKAFVSFVRAYKEHHCSF--IFRWKDLEIGKLAMGYGLLYLPSM 472

[Close]

BLAST of CmoCh05G014270 vs. TAIR 10
Match: AT1G71370.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 194.5 bits (493), Expect = 2.4e-49
Identity = 143/527 (27.13%), Postives = 232/527 (44.02%), Query Frame = 0


Query: 36  ELRDKMGFEVPTLVQAQAIPAILSGRHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRA 95
           E  D+ GFEV T VQA+ IP + S + V+V+AATG+GKT+A+L+P I  +++S+    + 
Sbjct: 29  EALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKP 88

Query: 96  DGTFSLVLVPTRELCMQVYETLQKLLHRYHWIVPGYITGGESRSKEKARL-RKGISILVA 155
                +++ PTREL  Q+++  +  +     +    + GG     +   L  +G ++L+ 
Sbjct: 89  HQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIG 148

Query: 156 TPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIVNKDNGT 215
           TPGRL D +K      + NL  ++ DEADR+ ++G  K+V  I+  L  ++         
Sbjct: 149 TPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQR--------- 208

Query: 216 SSFEFPQQNLLFSATLNEKVNCFAKISLENPIMIGLDAGNNALEFQPSEHGRFLGHDIND 275
                  +  LFSAT  + V   AK  L N + +                       I+ 
Sbjct: 209 -------RTGLFSATQTQAVADLAKAGLRNAMEV-----------------------ISG 268

Query: 276 EAQPTRKEKNLIADYKIPTQLVQSYVQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTC 335
               ++    L  +Y +  +  Q   Q             L +L   +  +K +V F TC
Sbjct: 269 AESKSKTSSGLYCEY-LKCEADQKSSQ-------------LVHLLIENKNKKLVVFFMTC 328

Query: 336 DAVDFHYSLFGGFKFSSSESEPRSEHLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALL 395
             VD+   +        S S             F  HG M  + R T   +F      +L
Sbjct: 329 ACVDYWGLVLSKIPTLKSIS------------FFSTHGKMDQKGRDTALASFTEASSGVL 388

Query: 396 LSTDIAARGLDFPNVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQD 455
           L TD+AARGLD P +  ++QYDPP +   ++HRVGRTAR+  +G +++FL P E DY++ 
Sbjct: 389 LCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKETDYVEF 448

Query: 456 LRNHGVSLTEYPLVK-VLDSFPVRGRKHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMM 515
           +R   V L E    +   D  P+                         + S    +  ++
Sbjct: 449 MRIRRVPLQERKCSENASDVIPI-------------------------IRSLAIKDRAVL 463

Query: 516 KLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSV 561
           +   +AF S+VRAY  H      IF  K L +G +A  + +   P +
Sbjct: 509 EKGLQAFVSFVRAYKEH--HCSYIFSWKGLEIGKLAMGYGILSFPYI 463

The following BLAST results are available for this feature:

BLAST of CmoCh05G014270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XJN0	5.3e-203	62.83	DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana OX=3702 GN=RH17 P...	[more]
Q0DLB9	2.7e-199	58.77	DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9H8H2	4.9e-108	39.90	Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens OX=9606 GN=DDX31 PE=1 ...	[more]
Q6NZQ2	2.8e-103	39.56	Probable ATP-dependent RNA helicase DDX31 OS=Mus musculus OX=10090 GN=Ddx31 PE=2...	[more]
Q869P0	9.3e-99	35.05	Probable ATP-dependent RNA helicase ddx31 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of CmoCh05G014270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G427	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IGD1	0.0e+00	98.47	DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A1S3CB30	3.4e-306	91.53	DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1G419	1.5e-296	100.00	DEAD-box ATP-dependent RNA helicase 17 isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1DL75	1.3e-292	86.80	DEAD-box ATP-dependent RNA helicase 17 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CmoCh05G014270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946513.1	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita moschata] >XP_02354...	[more]
XP_022975310.1	0.0e+00	98.47	DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita maxima]	[more]
XP_008460014.1	7.1e-306	91.53	PREDICTED: DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucumis melo]	[more]
XP_004141076.1	9.3e-306	91.85	DEAD-box ATP-dependent RNA helicase 17 [Cucumis sativus] >KGN60526.2 hypothetica...	[more]
XP_022946514.1	3.0e-296	100.00	DEAD-box ATP-dependent RNA helicase 17 isoform X2 [Cucurbita moschata] >XP_02354...	[more]

BLAST of CmoCh05G014270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40700.1	3.8e-204	62.83	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G65900.1	7.6e-72	33.69	DEA(D/H)-box RNA helicase family protein	[more]
AT3G18600.1	5.6e-67	33.63	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G05450.1	7.4e-51	27.89	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G71370.1	2.4e-49	27.13	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 581..588
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 574..588
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 561..588
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 12..583
None	No IPR available	PANTHER	PTHR24031:SF721	ATP-DEPENDENT RNA HELICASE DDX31-RELATED	coord: 12..583
None	No IPR available	CDD	cd17949	DEADc_DDX31	coord: 33..249 e-value: 2.65276E-107 score: 319.532
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 295..444 e-value: 6.18287E-38 score: 134.557
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 357..435 e-value: 4.0E-25 score: 99.5
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 320..435 e-value: 2.9E-22 score: 79.1
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 310..482 score: 17.101654
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 42..263 e-value: 1.8E-46 score: 170.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 54..248 score: 29.62278
IPR025313	Domain of unknown function DUF4217	SMART	SM01178	DUF4217_3	coord: 497..562 e-value: 3.8E-25 score: 99.5
IPR025313	Domain of unknown function DUF4217	PFAM	PF13959	DUF4217	coord: 499..560 e-value: 9.0E-20 score: 70.6
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 48..234 e-value: 6.3E-42 score: 143.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..251 e-value: 4.8E-72 score: 244.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 297..585 e-value: 3.0E-41 score: 143.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..248
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 60..463
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 178..186
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 22..51 score: 9.457594

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G014270.1	CmoCh05G014270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding