CmoCh05G013870 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G013870
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionInositol oxygenase
LocationCmo_Chr05: 10711658 .. 10712265 (-)
RNA-Seq ExpressionCmoCh05G013870
SyntenyCmoCh05G013870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGTGAGGCCAAATTTATTTGGCGCAGATATGAAGGACGAAAAAAGGAGAAGATAAAAGGGCAGAAGCAAGAGAAGAAATATGAGAAAATAAAACACCCAAATTTGAGGCTAAACCCGAAGCCACGAAGCCACCCGAACTTCAGTTAGGAGCCGAATTCGGCGGCGGAGACAGCACACCGAAGGATTCCCGACAATGAACAGGTGGTTCATTGAGCCTTTCAGGAAGTTTGCGGCGGCCGGCGGACGGCGGTGCTTGGTCAAGGACGCTCATTGCGACTTCACTCATGGCGTTTCCGATGAGTTTAAGACGCCGAGAGCCGTTCCGAGGACGCCCAATGTTTCTGCATTTATGGCCATGCTCGGCCTCCCTCCCATGCGTCTCAGCCCCCTCTTGCCTTCCTCAGGTTCCCTACTTCTACCCTCTTTTTTAGTCCCGTTTTTTTTATTTTTTTTAAAGGATAAAACGGTAATTTACCATCAACTAACTCTACTTCGAGTGAAATTCAACTTTAAAGAGCTACTACTCTTTTATATACGGGTAATCTTCTTTTTATTGACTATGACGTAAAAATAAATTCTATTTTGATGTAGATGTGAATTAG

mRNA sequence

ATGAAATGTGAGGCCAAATTTATTTGGCGCAGATATGAAGGACGAAAAAAGGAGAAGATAAAAGGGCAGAAGCAAGAGAAGAAATATGAGAAAATAAAACACCCAAATTTGAGGCTAAACCCGAAGCCACGAAGCCACCCGAACTTCAGTTAGGAGCCGAATTCGGCGGCGGAGACAGCACACCGAAGGATTCCCGACAATGAACAGGTGGTTCATTGAGCCTTTCAGGAAGTTTGCGGCGGCCGGCGGACGGCGGTGCTTGGTCAAGGACGCTCATTGCGACTTCACTCATGGCGTTTCCGATGAGTTTAAGACGCCGAGAGCCGTTCCGAGGACGCCCAATGTTTCTGCATTTATGGCCATGCTCGGCCTCCCTCCCATGCGTCTCAGCCCCCTCTTGCCTTCCTCAGATGTGAATTAG

Coding sequence (CDS)

ATGAACAGGTGGTTCATTGAGCCTTTCAGGAAGTTTGCGGCGGCCGGCGGACGGCGGTGCTTGGTCAAGGACGCTCATTGCGACTTCACTCATGGCGTTTCCGATGAGTTTAAGACGCCGAGAGCCGTTCCGAGGACGCCCAATGTTTCTGCATTTATGGCCATGCTCGGCCTCCCTCCCATGCGTCTCAGCCCCCTCTTGCCTTCCTCAGATGTGAATTAG

Protein sequence

MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPPMRLSPLLPSSDVN
Homology
[Close]
BLAST of CmoCh05G013870 vs. ExPASy TrEMBL
Match: A0A6J1G2U9 (Inositol oxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450290 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.7e-34
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSD 72
          MRLSPLLPSS+
Sbjct: 61 MRLSPLLPSSE 71

[Close]
BLAST of CmoCh05G013870 vs. ExPASy TrEMBL
Match: A0A6J1G2V8 (Inositol oxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450290 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.7e-34
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSDVN 74
          MRLSPLLPSS  N
Sbjct: 61 MRLSPLLPSSVEN 73

[Close]
BLAST of CmoCh05G013870 vs. ExPASy TrEMBL
Match: A0A6J1KJU6 (Inositol oxygenase OS=Cucurbita maxima OX=3661 GN=LOC111493835 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.2e-29
Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCL+KDAHCDFT GVSDEFKT RAVPRT NVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLLKDAHCDFTQGVSDEFKTRRAVPRTANVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSDVN 74
          MR +PLLPSS  N
Sbjct: 61 MRPNPLLPSSVEN 73

[Close]
BLAST of CmoCh05G013870 vs. ExPASy TrEMBL
Match: A0A6J1KH81 (Inositol oxygenase OS=Cucurbita maxima OX=3661 GN=LOC111493835 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.2e-29
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCL+KDAHCDFT GVSDEFKT RAVPRT NVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLLKDAHCDFTQGVSDEFKTRRAVPRTANVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSD 72
          MR +PLLPSS+
Sbjct: 61 MRPNPLLPSSE 71

[Close]
BLAST of CmoCh05G013870 vs. ExPASy TrEMBL
Match: A0A6J1K129 (UDP-glycosyltransferase 76B1-like OS=Cucurbita maxima OX=3661 GN=LOC111489191 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.7e-09
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0 

Query: 6   IEPFRK----FAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPPM 65
           +EP RK      AA    CL+ DAH  FT  V+DEF+  R V RT N+SAF+AM+GLP +
Sbjct: 87  VEPLRKCVSELVAASNIGCLITDAHWHFTQSVADEFQIRRVVLRTGNISAFLAMVGLPDL 146

Query: 66  RLSPLLPSSD 72
           R   LLPSS+
Sbjct: 147 RRKGLLPSSE 156

[Close]
BLAST of CmoCh05G013870 vs. NCBI nr
Match: KAG7030472.1 (Inositol oxygenase 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSDVN 74
          MRLSPLLPSS  N
Sbjct: 61 MRLSPLLPSSVEN 73

[Close]
BLAST of CmoCh05G013870 vs. NCBI nr
Match: XP_022946103.1 (inositol oxygenase 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSDVN 74
          MRLSPLLPSS  N
Sbjct: 61 MRLSPLLPSSVEN 73

[Close]
BLAST of CmoCh05G013870 vs. NCBI nr
Match: XP_022946104.1 (inositol oxygenase 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSD 72
          MRLSPLLPSS+
Sbjct: 61 MRLSPLLPSSE 71

[Close]
BLAST of CmoCh05G013870 vs. NCBI nr
Match: KAG6599496.1 (Inositol oxygenase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.0 bits (380), Expect = 4.0e-33
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSD 72
          MRL+PLLPSS+
Sbjct: 61 MRLNPLLPSSE 71

[Close]
BLAST of CmoCh05G013870 vs. NCBI nr
Match: XP_023545591.1 (inositol oxygenase 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 9.0e-33
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0 

Query: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60
          MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP
Sbjct: 1  MNRWFIEPFRKFAAAGGRRCLVKDAHCDFTHGVSDEFKTPRAVPRTPNVSAFMAMLGLPP 60

Query: 61 MRLSPLLPSSDVN 74
          +RL+PLLPSS  N
Sbjct: 61 LRLNPLLPSSVEN 73

The following BLAST results are available for this feature:
BLAST of CmoCh05G013870 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh05G013870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G2U98.7e-3498.59Inositol oxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450290 PE=3 SV=1[more]
A0A6J1G2V88.7e-3497.26Inositol oxygenase OS=Cucurbita moschata OX=3662 GN=LOC111450290 PE=3 SV=1[more]
A0A6J1KJU62.2e-2989.04Inositol oxygenase OS=Cucurbita maxima OX=3661 GN=LOC111493835 PE=3 SV=1[more]
A0A6J1KH812.2e-2990.14Inositol oxygenase OS=Cucurbita maxima OX=3661 GN=LOC111493835 PE=3 SV=1[more]
A0A6J1K1295.7e-0951.43UDP-glycosyltransferase 76B1-like OS=Cucurbita maxima OX=3661 GN=LOC111489191 PE... [more]
BLAST of CmoCh05G013870 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7030472.11.8e-3397.26Inositol oxygenase 4 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022946103.11.8e-3397.26inositol oxygenase 4-like isoform X1 [Cucurbita moschata][more]
XP_022946104.11.8e-3398.59inositol oxygenase 4-like isoform X2 [Cucurbita moschata][more]
KAG6599496.14.0e-3397.18Inositol oxygenase 4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023545591.19.0e-3394.52inositol oxygenase 4-like isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of CmoCh05G013870 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G013870.1CmoCh05G013870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019310 inositol catabolic process
biological_process GO:0019853 L-ascorbic acid biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0050113 inositol oxygenase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016740 transferase activity