CmoCh05G012330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G012330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	PRA1 family protein
Location	Cmo_Chr05: 9620372 .. 9621004 (-)
RNA-Seq Expression	CmoCh05G012330
Synteny	CmoCh05G012330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACCGGTTAAATTCTCCGCCGGCTACGGCACCGTCCCCTCTCCGGCCGCCTCCACCTCCGCCGGAGTTCCACCATCTTTCCCTTCCAGTTCCTCCTTCCTCGAACGTGCTAAATCCACCACGCAATCCCTAATCGCCACACGGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTTTCTCTCCCTTTCAGCTATGACGACGCCATGGCCAGAATCCGCCAGAACGTCGACTACTTTCGTGTTAATTACGCCTTGGTGATGCTCATAATCGTTTTCCTCAGCCTGTTCTGGCACCCGATTTCGATCATCGTCTTTCTCCTCATCTTCGTTGGTTGGTTGTTCTGCTACTTCCTTCGTGACCAGCCCCTCGTTCTCTTCAACCAAACATTCGATGATAAAATTGTTTTGGGGGTTTTGAGCATTGTTACCATCATTGCTCTTGTTTCTACTGATGTCGGATCGAATGTTTTGGGAGCCCTAATTACAGGTGTCGCTGTGGTCGGACTTCACGCGGCGTTTCGGATTACAGCGGATCATTTCCTCGACGAGGAGACCGCCGCAGAAGGGGGATTGCTGTCGGTTGTGGGAAATCAGCAACAACAACAACGAGGTTACACTCGGATTTGA

mRNA sequence

ATGTCACCGGTTAAATTCTCCGCCGGCTACGGCACCGTCCCCTCTCCGGCCGCCTCCACCTCCGCCGGAGTTCCACCATCTTTCCCTTCCAGTTCCTCCTTCCTCGAACGTGCTAAATCCACCACGCAATCCCTAATCGCCACACGGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTTTCTCTCCCTTTCAGCTATGACGACGCCATGGCCAGAATCCGCCAGAACGTCGACTACTTTCGTGTTAATTACGCCTTGGTGATGCTCATAATCGTTTTCCTCAGCCTGTTCTGGCACCCGATTTCGATCATCGTCTTTCTCCTCATCTTCGTTGGTTGGTTGTTCTGCTACTTCCTTCGTGACCAGCCCCTCGTTCTCTTCAACCAAACATTCGATGATAAAATTGTTTTGGGGGTTTTGAGCATTGTTACCATCATTGCTCTTGTTTCTACTGATGTCGGATCGAATGTTTTGGGAGCCCTAATTACAGGTGTCGCTGTGGTCGGACTTCACGCGGCGTTTCGGATTACAGCGGATCATTTCCTCGACGAGGAGACCGCCGCAGAAGGGGGATTGCTGTCGGTTGTGGGAAATCAGCAACAACAACAACGAGGTTACACTCGGATTTGA

Coding sequence (CDS)

ATGTCACCGGTTAAATTCTCCGCCGGCTACGGCACCGTCCCCTCTCCGGCCGCCTCCACCTCCGCCGGAGTTCCACCATCTTTCCCTTCCAGTTCCTCCTTCCTCGAACGTGCTAAATCCACCACGCAATCCCTAATCGCCACACGGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTTTCTCTCCCTTTCAGCTATGACGACGCCATGGCCAGAATCCGCCAGAACGTCGACTACTTTCGTGTTAATTACGCCTTGGTGATGCTCATAATCGTTTTCCTCAGCCTGTTCTGGCACCCGATTTCGATCATCGTCTTTCTCCTCATCTTCGTTGGTTGGTTGTTCTGCTACTTCCTTCGTGACCAGCCCCTCGTTCTCTTCAACCAAACATTCGATGATAAAATTGTTTTGGGGGTTTTGAGCATTGTTACCATCATTGCTCTTGTTTCTACTGATGTCGGATCGAATGTTTTGGGAGCCCTAATTACAGGTGTCGCTGTGGTCGGACTTCACGCGGCGTTTCGGATTACAGCGGATCATTTCCTCGACGAGGAGACCGCCGCAGAAGGGGGATTGCTGTCGGTTGTGGGAAATCAGCAACAACAACAACGAGGTTACACTCGGATTTGA

Protein sequence

MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI

Homology

[Close]

BLAST of CmoCh05G012330 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.6e-43
Identity = 105/208 (50.48%), Postives = 139/208 (66.83%), Query Frame = 0


Query: 9   GYGTVPSPAASTSAGVPPSFPSSSSFL----ERAKSTTQSLIATRRPWRELFDFSAFSLP 68
           GYG       +   GV PS  S+++ +     RAK TTQS+I T RPWRE+ D SA SLP
Sbjct: 9   GYG------GAGGGGVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLP 68

Query: 69  FSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLRD-- 128
             YD+AMA ++ N+ YFR NYAL +L IVFL L +HP+S+I F+++F+GW+  YF RD  
Sbjct: 69  RGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDAN 128

Query: 129 QPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHF 188
             +V+  +  DDKIVL +LS+VT++ALV TDVG NVL +LI G+ +VG H AFR T D F
Sbjct: 129 DSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLF 188

Query: 189 LDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           LDEE+A  GGL+S  G+  +    YT I
Sbjct: 189 LDEESARRGGLVS-AGSGNRPPSSYTPI 209

[Close]

BLAST of CmoCh05G012330 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.4e-35
Identity = 84/179 (46.93%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 10  YGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDD 69
           YG +P     TS+   P     S  L RAK   ++ +ATRR WR +FDF +  LP    D
Sbjct: 4   YGAIP-----TSSHASPLVDVES--LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSD 63

Query: 70  AMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLRDQPLVLFN 129
           A  RI+ N+ YFR+NYA+V+LI++F SL WHP S+IVF ++ V W+F YFLRD+P+ LF 
Sbjct: 64  AFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFR 123

Query: 130 QTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETA 189
              DD+ VL VLS++T++ L+ T+   N++GAL+TG  +V +H+  R T D FLDEE A
Sbjct: 124 FQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of CmoCh05G012330 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.9e-34
Identity = 84/189 (44.44%), Postives = 124/189 (65.61%), Query Frame = 0


Query: 10  YGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDD 69
           YG +P+ +        PS      ++ RAK   +S +ATRRPW+ +FDF + +LP  + D
Sbjct: 4   YGAIPTSS-------HPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFD 63

Query: 70  AMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLRDQPLVLFN 129
           A++RI+ N+ YFR NYA+ +L I+FLSL +HP S+IV  ++ V W+F YFLRD+PLV+F 
Sbjct: 64  AISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFG 123

Query: 130 QTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAA 189
              DD+ VL  LS++T++ L+ T   SN+LG+L+T   +V +HAA R + + FLDEE AA
Sbjct: 124 YQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAA 183

Query: 190 ---EGGLLS 196
                GL+S
Sbjct: 184 VTEASGLMS 185

[Close]

BLAST of CmoCh05G012330 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.6e-32
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 25  PPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDDAMARIRQNVDYFRVN 84
           P S P+  +FL R  S+ +  ++ RRPW EL D SA S P S  DA +RIR+N+ YF+VN
Sbjct: 23  PVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVN 82

Query: 85  YALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLR--DQPLVLFNQTFDDKIVLGVLS 144
           Y  ++ +++ LSL  HP S++V L +F  W+F Y  R  DQPLV+  +TF D+  LGVL 
Sbjct: 83  YVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLV 142

Query: 145 IVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLS 196
           I+TI+ +  T VGS +  AL+ G  +V LH AFR+  D FLD++  A  GLLS
Sbjct: 143 ILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPANTGLLS 195

[Close]

BLAST of CmoCh05G012330 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.5e-30
Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 13  VPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDDAMA 72
           V +  A+T +  P +  +  +FL R  S+ +  ++ RRPW EL D S+F+ P S  D+ +
Sbjct: 10  VTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFS 69

Query: 73  RIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLR--DQPLVLFNQ 132
           RIR+N+ YF+VNY+ ++ +++  SL  HP S++V L +   W+F Y  R  DQPLVLF +
Sbjct: 70  RIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGR 129

Query: 133 TFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAE 192
           +F D+  L  L + TI+ +  T VGS +  AL  G+A+V LH AFR+  D FLDE+  A 
Sbjct: 130 SFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPAN 189

Query: 193 GGLLSVVGN 200
            GLLS +GN
Sbjct: 190 AGLLSFIGN 198

[Close]

BLAST of CmoCh05G012330 vs. ExPASy TrEMBL
Match: A0A6J1G2T7 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60
           MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA
Sbjct: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60

Query: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120
           FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL
Sbjct: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120

Query: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180
           RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD
Sbjct: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180

Query: 181 HFLDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           HFLDEETAAEGGLLSVVGNQQQQQRGYTRI
Sbjct: 181 HFLDEETAAEGGLLSVVGNQQQQQRGYTRI 210

[Close]

BLAST of CmoCh05G012330 vs. ExPASy TrEMBL
Match: A0A6J1KG44 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111493580 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.7e-103
Identity = 209/215 (97.21%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60
           MSPVKFSAGYGTVPSPAASTSAGV PSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA
Sbjct: 1   MSPVKFSAGYGTVPSPAASTSAGVTPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60

Query: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120
           FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL
Sbjct: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120

Query: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180
           RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD
Sbjct: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180

Query: 181 HFLDEETAAEGGLLSVVGN-----QQQQQRGYTRI 211
           HFLDEETAAEGGLLSVVGN     QQQQQRGYTRI
Sbjct: 181 HFLDEETAAEGGLLSVVGNQQQQQQQQQQRGYTRI 215

[Close]

BLAST of CmoCh05G012330 vs. ExPASy TrEMBL
Match: A0A5A7VAZ9 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001570 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.7e-94
Identity = 194/214 (90.65%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAA----STSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELF 60
           MS VKFS+GYG VPSPAA    +TS+G PP FPSSSSFLERAK+TTQSLIAT+RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLF 120
           DFSAFSLPFSYDDAMARIRQNV+YFRVNYALVMLIIVFLSLFWHPISIIVFLLIFV WLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 CYFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
            YF RDQPLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGVAVVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           ITADHFLDEETAAEGGLLSVVGN QQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGN-QQQQRGYTRI 213

[Close]

BLAST of CmoCh05G012330 vs. ExPASy TrEMBL
Match: A0A1S3C2L3 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93
Identity = 194/214 (90.65%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAA----STSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELF 60
           MS VKFS+GYG VPSPAA    +TS+G PP FPSSSSFLERAK+TTQSLIAT RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELF 60

Query: 61  DFSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLF 120
           DFSAFSLPFSYDDAMARIRQNV+YFRVNYALVMLIIVFLSLFWHPISIIVFLLIFV WLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 CYFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
            YF RDQPLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGVAVVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           ITADHFLDEETAAEGGLLSVVGN QQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGN-QQQQRGYTRI 213

[Close]

BLAST of CmoCh05G012330 vs. ExPASy TrEMBL
Match: A0A0A0LIB9 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.2e-93
Identity = 192/214 (89.72%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAA----STSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELF 60
           MS VKFS+GYG VPS AA    +TS+G PPSFPSSSSFLERAK+TTQSLIAT+RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLF 120
           DFSAFSLPFSYDDAMARIRQNV+YFRVNYALVMLIIVFLSLFWHPISIIVFLLIFV WLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 CYFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
            YF RDQPLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           ITADHFLDEETAAEGGLLSVVGN QQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGN-QQQQRGYTRI 213

[Close]

BLAST of CmoCh05G012330 vs. NCBI nr
Match: XP_022946131.1 (PRA1 family protein E [Cucurbita moschata] >KAG7030313.1 PRA1 family protein E, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392.5 bits (1007), Expect = 2.3e-105
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60
           MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA
Sbjct: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60

Query: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120
           FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL
Sbjct: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120

Query: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180
           RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD
Sbjct: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180

Query: 181 HFLDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           HFLDEETAAEGGLLSVVGNQQQQQRGYTRI
Sbjct: 181 HFLDEETAAEGGLLSVVGNQQQQQRGYTRI 210

[Close]

BLAST of CmoCh05G012330 vs. NCBI nr
Match: KAG6599317.1 (PRA1 family protein E, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.7 bits (997), Expect = 3.3e-104
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60
           MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA
Sbjct: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60

Query: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120
           FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVF SLFWHPISIIVFLLIFVGWLFCYFL
Sbjct: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFFSLFWHPISIIVFLLIFVGWLFCYFL 120

Query: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180
           RDQPLVLFNQTFDDKIVLGVLSI+TIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD
Sbjct: 121 RDQPLVLFNQTFDDKIVLGVLSIITIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180

Query: 181 HFLDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           HFLDEETAAEGGLLSVVG+QQQQQRGYTRI
Sbjct: 181 HFLDEETAAEGGLLSVVGSQQQQQRGYTRI 210

[Close]

BLAST of CmoCh05G012330 vs. NCBI nr
Match: XP_022999099.1 (PRA1 family protein E-like [Cucurbita maxima])

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-102
Identity = 209/215 (97.21%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60
           MSPVKFSAGYGTVPSPAASTSAGV PSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA
Sbjct: 1   MSPVKFSAGYGTVPSPAASTSAGVTPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60

Query: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120
           FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL
Sbjct: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120

Query: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180
           RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD
Sbjct: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180

Query: 181 HFLDEETAAEGGLLSVVGN-----QQQQQRGYTRI 211
           HFLDEETAAEGGLLSVVGN     QQQQQRGYTRI
Sbjct: 181 HFLDEETAAEGGLLSVVGNQQQQQQQQQQRGYTRI 215

[Close]

BLAST of CmoCh05G012330 vs. NCBI nr
Match: XP_023521163.1 (PRA1 family protein E-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.6 bits (971), Expect = 3.4e-101
Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60
           MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA
Sbjct: 1   MSPVKFSAGYGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSA 60

Query: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFL 120
           FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVF SLFWHPISIIVFLLIFVGWLFCYFL
Sbjct: 61  FSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFFSLFWHPISIIVFLLIFVGWLFCYFL 120

Query: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180
           RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD
Sbjct: 121 RDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITAD 180

Query: 181 HFLDEETAAEGGLLSVVGNQQQQQ 205
           HFLDEETAAEGGLLSVVGNQQQQQ
Sbjct: 181 HFLDEETAAEGGLLSVVGNQQQQQ 204

[Close]

BLAST of CmoCh05G012330 vs. NCBI nr
Match: KAA0063596.1 (PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein E [Cucumis melo var. makuwa])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 194/214 (90.65%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MSPVKFSAGYGTVPSPAA----STSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELF 60
           MS VKFS+GYG VPSPAA    +TS+G PP FPSSSSFLERAK+TTQSLIAT+RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLF 120
           DFSAFSLPFSYDDAMARIRQNV+YFRVNYALVMLIIVFLSLFWHPISIIVFLLIFV WLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 CYFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180
            YF RDQPLVLFNQTFDDK+VLGVLSI TIIALVSTDVGSNVLGALITGVAVVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           ITADHFLDEETAAEGGLLSVVGN QQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGN-QQQQRGYTRI 213

[Close]

BLAST of CmoCh05G012330 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-44
Identity = 105/208 (50.48%), Postives = 139/208 (66.83%), Query Frame = 0


Query: 9   GYGTVPSPAASTSAGVPPSFPSSSSFL----ERAKSTTQSLIATRRPWRELFDFSAFSLP 68
           GYG       +   GV PS  S+++ +     RAK TTQS+I T RPWRE+ D SA SLP
Sbjct: 9   GYG------GAGGGGVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLP 68

Query: 69  FSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLRD-- 128
             YD+AMA ++ N+ YFR NYAL +L IVFL L +HP+S+I F+++F+GW+  YF RD  
Sbjct: 69  RGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDAN 128

Query: 129 QPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHF 188
             +V+  +  DDKIVL +LS+VT++ALV TDVG NVL +LI G+ +VG H AFR T D F
Sbjct: 129 DSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLF 188

Query: 189 LDEETAAEGGLLSVVGNQQQQQRGYTRI 211
           LDEE+A  GGL+S  G+  +    YT I
Sbjct: 189 LDEESARRGGLVS-AGSGNRPPSSYTPI 209

[Close]

BLAST of CmoCh05G012330 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36
Identity = 84/179 (46.93%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 10  YGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDD 69
           YG +P     TS+   P     S  L RAK   ++ +ATRR WR +FDF +  LP    D
Sbjct: 4   YGAIP-----TSSHASPLVDVES--LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSD 63

Query: 70  AMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLRDQPLVLFN 129
           A  RI+ N+ YFR+NYA+V+LI++F SL WHP S+IVF ++ V W+F YFLRD+P+ LF 
Sbjct: 64  AFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFR 123

Query: 130 QTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETA 189
              DD+ VL VLS++T++ L+ T+   N++GAL+TG  +V +H+  R T D FLDEE A
Sbjct: 124 FQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of CmoCh05G012330 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.5e-35
Identity = 84/189 (44.44%), Postives = 124/189 (65.61%), Query Frame = 0


Query: 10  YGTVPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDD 69
           YG +P+ +        PS      ++ RAK   +S +ATRRPW+ +FDF + +LP  + D
Sbjct: 4   YGAIPTSS-------HPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFD 63

Query: 70  AMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLRDQPLVLFN 129
           A++RI+ N+ YFR NYA+ +L I+FLSL +HP S+IV  ++ V W+F YFLRD+PLV+F 
Sbjct: 64  AISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFG 123

Query: 130 QTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAA 189
              DD+ VL  LS++T++ L+ T   SN+LG+L+T   +V +HAA R + + FLDEE AA
Sbjct: 124 YQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAA 183

Query: 190 ---EGGLLS 196
                GL+S
Sbjct: 184 VTEASGLMS 185

[Close]

BLAST of CmoCh05G012330 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 )

HSP 1 Score: 139.4 bits (350), Expect = 3.2e-33
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 25  PPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDDAMARIRQNVDYFRVN 84
           P S P+  +FL R  S+ +  ++ RRPW EL D SA S P S  DA +RIR+N+ YF+VN
Sbjct: 23  PVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVN 82

Query: 85  YALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLR--DQPLVLFNQTFDDKIVLGVLS 144
           Y  ++ +++ LSL  HP S++V L +F  W+F Y  R  DQPLV+  +TF D+  LGVL 
Sbjct: 83  YVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLV 142

Query: 145 IVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAEGGLLS 196
           I+TI+ +  T VGS +  AL+ G  +V LH AFR+  D FLD++  A  GLLS
Sbjct: 143 ILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEPANTGLLS 195

[Close]

BLAST of CmoCh05G012330 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 133.7 bits (335), Expect = 1.8e-31
Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 13  VPSPAASTSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELFDFSAFSLPFSYDDAMA 72
           V +  A+T +  P +  +  +FL R  S+ +  ++ RRPW EL D S+F+ P S  D+ +
Sbjct: 10  VTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFS 69

Query: 73  RIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLFCYFLR--DQPLVLFNQ 132
           RIR+N+ YF+VNY+ ++ +++  SL  HP S++V L +   W+F Y  R  DQPLVLF +
Sbjct: 70  RIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGR 129

Query: 133 TFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFRITADHFLDEETAAE 192
           +F D+  L  L + TI+ +  T VGS +  AL  G+A+V LH AFR+  D FLDE+  A 
Sbjct: 130 SFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEPAN 189

Query: 193 GGLLSVVGN 200
            GLLS +GN
Sbjct: 190 AGLLSFIGN 198

The following BLAST results are available for this feature:

BLAST of CmoCh05G012330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRR1	2.6e-43	50.48	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	4.4e-35	46.93	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9C889	4.9e-34	44.44	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9FLB6	4.6e-32	46.24	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]
Q9SIY7	2.5e-30	41.80	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]

BLAST of CmoCh05G012330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2T7	1.1e-105	100.00	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1	[more]
A0A6J1KG44	6.7e-103	97.21	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111493580 PE=3 SV=1	[more]
A0A5A7VAZ9	5.7e-94	90.65	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G...	[more]
A0A1S3C2L3	1.3e-93	90.65	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1	[more]
A0A0A0LIB9	8.2e-93	89.72	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1	[more]

BLAST of CmoCh05G012330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946131.1	2.3e-105	100.00	PRA1 family protein E [Cucurbita moschata] >KAG7030313.1 PRA1 family protein E, ...	[more]
KAG6599317.1	3.3e-104	98.57	PRA1 family protein E, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022999099.1	1.4e-102	97.21	PRA1 family protein E-like [Cucurbita maxima]	[more]
XP_023521163.1	3.4e-101	99.51	PRA1 family protein E-like, partial [Cucurbita pepo subsp. pepo]	[more]
KAA0063596.1	1.2e-93	90.65	PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein...	[more]

BLAST of CmoCh05G012330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08770.1	1.8e-44	50.48	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	3.1e-36	46.93	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	3.5e-35	44.44	PRA1 (Prenylated rab acceptor) family protein	[more]
AT5G05380.1	3.2e-33	46.24	prenylated RAB acceptor 1.B3	[more]
AT2G40380.1	1.8e-31	41.80	prenylated RAB acceptor 1.B2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 46..186 e-value: 6.0E-48 score: 162.1
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 27..203
None	No IPR available	PANTHER	PTHR19317:SF13	PRA1 FAMILY PROTEIN	coord: 27..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G012330.1	CmoCh05G012330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane