CmoCh05G011630 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G011630
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	E3 ubiquitin-protein ligase ATL6-like
Location	Cmo_Chr05: 9188726 .. 9189865 (-)
RNA-Seq Expression	CmoCh05G011630
Synteny	CmoCh05G011630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCTCTTTCACCGCCGTCCACGCCGCCCTCTTCTTCCTCCTCTCCGTCTCCGTCTCCGTCTCCGCCCAGTCCCAATTCTCCCCCGACCCGAGATCCGACCCCTACCAGTATCGCCTCAGCGGTTCCATGGCGGTCATCATCGTAATCCTCATCGCCGCTCTCTTCTTCGTCGCTTTCTTCTCCGTCTACTTACGTCACTGCAACGATTCCCAATCCAACTCCGTCCGCCCTGTCACCGCCGCTGCTCGGTCCCGTCGCGCCGCTCGTGGTCTCGATCCGGCCGTGATTGAAACATTCCCGACGCTAATTTACTCCGATGTGAAACAGCATAAAATCGGTAAGAGTACCCTAGAATGCGCCGTTTGCTTGAATGAGTTCGAAGATGATGAAACGCTGCGTTTAATCCCTAAATGTGACCATGTGTTTCATCCTGAGTGTATTGATGCTTGGTTGGCTTCTCATACTACTTGCCCTGTTTGTCGCGCTAATTTATCGCCTCAACTCACTGAGTCCGTCCACCGAGTTGAAGATTCCGCCGCCGTAGTCGACTCGGATGAGAACAGAGGAGATATTGAAGCGCAGAACAACGACGTCGTTTCTGAGACTAATCCAACTGCGGCTCCACCGCCGATTCAGATACCAGCTGAATCGGAGTTGAATACGACGACGGCGGCTAACAAGTCGTTGAATCGTAACCGTACACGTGGATCCCGCTCCAATAGATTGCGGTGGTTATTCCCCCGGTCTCACTCAACTGGCCACTCCTTGGTTCAGCCCGGGGAGGACACCGAGCGGTTTACTCTCCGGTTGCCACTTGAAATAAGGAAGCAAGTAGTGAACCGGAAACTGAACCGGGCGACGAGTATGGTAATTCTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGCGAAGGGAGTAGTAGAGGGAAGTATTACCGAAGACTTGAACGGTTGGACCGGACATCAAAGTCAGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACTCGTATGTCATCGATGAAGACTCCCCGGGGAGGGAGTATCCATGGTGAACCGGGTTTGGGTCGAGAACTTGGACAAGGAAGTTCCACGGCCGAGTCGAGTAGGCTTCCGGTCTGA

mRNA sequence

ATGGTCTCTTTCACCGCCGTCCACGCCGCCCTCTTCTTCCTCCTCTCCGTCTCCGTCTCCGTCTCCGCCCAGTCCCAATTCTCCCCCGACCCGAGATCCGACCCCTACCAGTATCGCCTCAGCGGTTCCATGGCGGTCATCATCGTAATCCTCATCGCCGCTCTCTTCTTCGTCGCTTTCTTCTCCGTCTACTTACGTCACTGCAACGATTCCCAATCCAACTCCGTCCGCCCTGTCACCGCCGCTGCTCGGTCCCGTCGCGCCGCTCGTGGTCTCGATCCGGCCGTGATTGAAACATTCCCGACGCTAATTTACTCCGATGTGAAACAGCATAAAATCGGTAAGAGTACCCTAGAATGCGCCGTTTGCTTGAATGAGTTCGAAGATGATGAAACGCTGCGTTTAATCCCTAAATGTGACCATGTGTTTCATCCTGAGTGTATTGATGCTTGGTTGGCTTCTCATACTACTTGCCCTGTTTGTCGCGCTAATTTATCGCCTCAACTCACTGAGTCCGTCCACCGAGTTGAAGATTCCGCCGCCGTAGTCGACTCGGATGAGAACAGAGGAGATATTGAAGCGCAGAACAACGACGTCGTTTCTGAGACTAATCCAACTGCGGCTCCACCGCCGATTCAGATACCAGCTGAATCGGAGTTGAATACGACGACGGCGGCTAACAAGTCGTTGAATCGTAACCGTACACGTGGATCCCGCTCCAATAGATTGCGGTGGTTATTCCCCCGGTCTCACTCAACTGGCCACTCCTTGGTTCAGCCCGGGGAGGACACCGAGCGGTTTACTCTCCGGTTGCCACTTGAAATAAGGAAGCAAGTAGTGAACCGGAAACTGAACCGGGCGACGAGTATGGTAATTCTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGCGAAGGGAGTAGTAGAGGGAAGTATTACCGAAGACTTGAACGGTTGGACCGGACATCAAAGTCAGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACTCGTATGTCATCGATGAAGACTCCCCGGGGAGGGAGTATCCATGGTGAACCGGGTTTGGGTCGAGAACTTGGACAAGGAAGTTCCACGGCCGAGTCGAGTAGGCTTCCGGTCTGA

Coding sequence (CDS)

ATGGTCTCTTTCACCGCCGTCCACGCCGCCCTCTTCTTCCTCCTCTCCGTCTCCGTCTCCGTCTCCGCCCAGTCCCAATTCTCCCCCGACCCGAGATCCGACCCCTACCAGTATCGCCTCAGCGGTTCCATGGCGGTCATCATCGTAATCCTCATCGCCGCTCTCTTCTTCGTCGCTTTCTTCTCCGTCTACTTACGTCACTGCAACGATTCCCAATCCAACTCCGTCCGCCCTGTCACCGCCGCTGCTCGGTCCCGTCGCGCCGCTCGTGGTCTCGATCCGGCCGTGATTGAAACATTCCCGACGCTAATTTACTCCGATGTGAAACAGCATAAAATCGGTAAGAGTACCCTAGAATGCGCCGTTTGCTTGAATGAGTTCGAAGATGATGAAACGCTGCGTTTAATCCCTAAATGTGACCATGTGTTTCATCCTGAGTGTATTGATGCTTGGTTGGCTTCTCATACTACTTGCCCTGTTTGTCGCGCTAATTTATCGCCTCAACTCACTGAGTCCGTCCACCGAGTTGAAGATTCCGCCGCCGTAGTCGACTCGGATGAGAACAGAGGAGATATTGAAGCGCAGAACAACGACGTCGTTTCTGAGACTAATCCAACTGCGGCTCCACCGCCGATTCAGATACCAGCTGAATCGGAGTTGAATACGACGACGGCGGCTAACAAGTCGTTGAATCGTAACCGTACACGTGGATCCCGCTCCAATAGATTGCGGTGGTTATTCCCCCGGTCTCACTCAACTGGCCACTCCTTGGTTCAGCCCGGGGAGGACACCGAGCGGTTTACTCTCCGGTTGCCACTTGAAATAAGGAAGCAAGTAGTGAACCGGAAACTGAACCGGGCGACGAGTATGGTAATTCTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGCGAAGGGAGTAGTAGAGGGAAGTATTACCGAAGACTTGAACGGTTGGACCGGACATCAAAGTCAGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACTCGTATGTCATCGATGAAGACTCCCCGGGGAGGGAGTATCCATGGTGAACCGGGTTTGGGTCGAGAACTTGGACAAGGAAGTTCCACGGCCGAGTCGAGTAGGCTTCCGGTCTGA

Protein sequence

MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAFFSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPGLGRELGQGSSTAESSRLPV

Homology

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BLAST of CmoCh05G011630 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 271.2 bits (692), Expect = 1.8e-71
Identity = 180/406 (44.33%), Postives = 221/406 (54.43%), Query Frame = 0


Query: 11  LFFLLSVSVSVSAQSQFSPDPRSDPYQY-RLSGSMAVIIVILIAALFFVAFFSVYLRHCN 70
           + FLL +S +  A SQ  P P + PY Y RLS +MAVI+VILIAALFF+ FFS+Y RHC+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 71  DSQSNSVRPVTAAARSR----RAARGLDPAVIETFPTLIYSDVKQHKIGKSTLECAVCLN 130
                 V P    ARSR     AARGLD +V+ETFPT +YSDVK  K+GK  LECA+CLN
Sbjct: 75  GVPDAGVSP-AGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLN 134

Query: 131 EFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSAAVVDS 190
           EFEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRANL+ Q+ E           V+ 
Sbjct: 135 EFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAE--------GESVEP 194

Query: 191 DENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRSNRLRW 250
                D+E Q   VV+      AP P Q+               ++  R  G   +  R 
Sbjct: 195 GGTEPDLELQ-QVVVNPEPVVTAPVPEQL-----------VTSEVDSRRLPGVPVDLKRV 254

Query: 251 LFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVV-NRKLNRATSMVILARQSSSMRG-- 310
            F RSH+TGHS+VQPGE TERFTLRLP ++RK+++ + KLNR  S+++L R  SS RG  
Sbjct: 255 KFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKP 314

Query: 311 ----------------------------YRFGSGEGSSRGKYYRRLERLDRTSKSDRWVL 370
                                        R G+  GS R          D     DRW  
Sbjct: 315 IDRSRARSDRWLFRKTPSFLWRSRDDGSIRLGA-TGSVRASAVPNSTGSDSVRAGDRWAF 374

Query: 371 SITPPFFTRMSSMKTPRGG-SIHGEPGLGRELGQGSSTAESSRLPV 380
                F  R SS+  PRGG +  GE    +  G   ST+ S RLPV
Sbjct: 375 LRNASFLWRNSSVHVPRGGVNKDGEGTSVKSTGASGSTSGSVRLPV 398

[Close]

BLAST of CmoCh05G011630 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 253.1 bits (645), Expect = 5.1e-66
Identity = 155/353 (43.91%), Postives = 198/353 (56.09%), Query Frame = 0


Query: 14  LLSVSVSVSAQSQFSPDPRSDPYQY--RLSGSMAVIIVILIAALFFVAFFSVYLRHCNDS 73
           +L + +SVSA    +PD R DPY Y   LS +MAV++V++IAALFF+ FF+VY+RHC  +
Sbjct: 13  VLFLLLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGA 72

Query: 74  QSNSVRPVTAAAR---SRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLECAVCLNEFE 133
              SV P   A R   +   ARGLD   IETFPT +YS+VK  KIGK  LECA+CLNEFE
Sbjct: 73  VDGSVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFE 132

Query: 134 DDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSAAVVDSDEN 193
           DDETLRL+PKCDHVFHP CI AWL  H TCPVCR NL+ Q  E    VE           
Sbjct: 133 DDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVET---------- 192

Query: 194 RGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRSNRLRWLFP 253
             D+EAQ    V         P +++P                            R  FP
Sbjct: 193 --DLEAQQQSAV-------PVPVVELP----------------------------RVKFP 252

Query: 254 RSHSTGHSLVQPGEDTERFTLRLPLEIRKQVV-NRKLNRATSMVILARQSSSMRGYRFGS 313
           RSH+TGHS+V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ +L R  SS  G     
Sbjct: 253 RSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRSG----- 301

Query: 314 GEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRM---SSMKTPRGGSIHG 358
                     ++++R    +KSDRW+   TP F  R     S++    GS+ G
Sbjct: 313 ----------KQVDR--SRAKSDRWLFRKTPSFLWRNRDDGSIRLGGTGSVRG 301

[Close]

BLAST of CmoCh05G011630 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 203.4 bits (516), Expect = 4.6e-51
Identity = 133/323 (41.18%), Postives = 178/323 (55.11%), Query Frame = 0


Query: 39  RLSGSMAVIIVILIAALFFVAFFSVYLRHCND-----SQSNSVRPVTAAARSRRAARGLD 98
           R   +MA+++++L++  FF+ FFSVY+R C +        N        A +R+ ARGLD
Sbjct: 58  RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLD 117

Query: 99  PAVIETFPTLIYSDVKQHKIGKSTLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLA 158
            ++IETFPT  YS VK  +IGK  LEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL 
Sbjct: 118 ASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLR 177

Query: 159 SHTTCPVCRANLSPQLTESVHRVEDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQ 218
           SHTTCP+CRA+L P   ES+  ++    V D                    P + P   +
Sbjct: 178 SHTTCPLCRADLIPVPGESIVSIQIPGLVNDP-------------------PGSDPNGDR 237

Query: 219 IPAESELNTTTAANKSLNRNRTRGSRSNRLRW----LFPRSHSTGHSLVQPGEDTERFTL 278
           I +    +     + +L  N++   RS    W    +F  S  TG    Q  E+ +RFTL
Sbjct: 238 IRSLGSPDARLIESVALTCNQSMPRRSMSTGWNLAGMFTNSDRTG----QHSENLDRFTL 297

Query: 279 RLPLEIRKQVVNRKLNRATSMVILARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKS 338
           RLP +I  ++VN  L++    V L +  SS RGYR GS  GS R  +Y   ER D+  + 
Sbjct: 298 RLPQDIHNKLVNPNLSKV--HVALPQVMSSTRGYRTGS-LGSERNYFY--YERFDQDGRL 352

Query: 339 DRWVLSITPPFFTRMSSMKTPRG 353
           DR   SITPP+ T   +  +P G
Sbjct: 358 DRRPFSITPPYRTSSINHMSPGG 352

[Close]

BLAST of CmoCh05G011630 vs. ExPASy Swiss-Prot
Match: Q9SK92 (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-46
Identity = 137/357 (38.38%), Postives = 188/357 (52.66%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           MV  + V     FLL +   V A S+F  + R+       S + A+I+++L++  F +  
Sbjct: 1   MVVMSRVSFYSSFLLLLLEVVVASSEFDDEGRTS-----FSPTTAIIMIVLVSVFFALGC 60

Query: 61  FSVYLRHCND---SQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKST 120
            SVY+R C        +   P       +    GLD +VIETFPT  YS VK  +IGK  
Sbjct: 61  ISVYMRRCLQHALGMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEA 120

Query: 121 LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESV-HRV 180
           LEC VCLNEFEDDETLRLIP+C HVFHP CIDAWL S TTCP+CRANL P   ESV   +
Sbjct: 121 LECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVSSEI 180

Query: 181 EDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTT-AANKSLNRNRT 240
              A     +  R  I+     V++             P E  +++     N+S+ R   
Sbjct: 181 PGLARETGQNSLRTPIDDNRKRVLTS------------PDERLIDSVAWTGNQSMPR--- 240

Query: 241 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATS--MVIL 300
              +S    W     +S   S  QP E+ +R+TLRLP EI  Q+VN  L +  S   + L
Sbjct: 241 ---KSMSTGWKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLAL 300

Query: 301 ARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTP 351
            ++ SS+RG+R GS  G+ +  +Y   ER D+  + DR   SITPP+ TR  S+++P
Sbjct: 301 PQERSSVRGFRTGS-LGTEKNYFY--FERFDQDGRLDRRPFSITPPYHTR--SIQSP 329

[Close]

BLAST of CmoCh05G011630 vs. ExPASy Swiss-Prot
Match: O64763 (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.2e-44
Identity = 135/367 (36.78%), Postives = 194/367 (52.86%), Query Frame = 0


Query: 11  LFFLLSVSVSVSAQSQFSPDPRSDP--YQYRLSGSMAVIIVILIAALFFVAFFSVYLRHC 70
           L FLL + +  S    F     + P   + + +  + V+I +L   +FF+ F S++ R  
Sbjct: 16  LLFLLLLLLLQSVPYGFGQTQTTPPGTTKTKPNDPVVVVITVLFLVIFFMVFGSIFCRRS 75

Query: 71  ND--SQSNSVRPVTAAARS------RRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 130
           N   S+S+  R   A A S      R  ARGLD   IETFPT +YS+VK  +IGK  +EC
Sbjct: 76  NAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVEC 135

Query: 131 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANL-------SPQLTESV 190
           AVCL EFEDDETLRL+P C HVFH +C+D WL+ H+TCP+CRA+L           TES 
Sbjct: 136 AVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLNQQGDDDDSTESY 195

Query: 191 HRVEDSAAVVDSDENRGDI----EAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKS 250
              +       +D  RG +    +A   D V+ +N    P                    
Sbjct: 196 SGTDPGTISSSTDPERGMVLESSDAHLLDAVTWSNSNITP-------------------- 255

Query: 251 LNRNRTRGSRSNRLRW-LFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRAT 310
             R+++ G  S ++   LFPRSHSTGHSL+QP  + +RFTLRLP ++R+Q++  K +R  
Sbjct: 256 --RSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSRTM 315

Query: 311 SMVILARQSSSMR-GYRFGSGEGSSRGKY-YRRLERLDRTSKSDRWVLSITPPFFTRMSS 354
             V L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R  S
Sbjct: 316 GHVALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRSGS 352

[Close]

BLAST of CmoCh05G011630 vs. ExPASy TrEMBL
Match: A0A6J1G3D2 (E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita moschata OX=3662 GN=LOC111450413 PE=4 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 5.6e-209
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF
Sbjct: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120
           FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC
Sbjct: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120

Query: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180
           AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA
Sbjct: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180

Query: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240
           AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS
Sbjct: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360

Query: 361 LGRELGQGSSTAESSRLPV 380
           LGRELGQGSSTAESSRLPV
Sbjct: 361 LGRELGQGSSTAESSRLPV 379

[Close]

BLAST of CmoCh05G011630 vs. ExPASy TrEMBL
Match: A0A6J1KG60 (E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita maxima OX=3661 GN=LOC111493598 PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 3.5e-203
Identity = 369/379 (97.36%), Postives = 374/379 (98.68%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           M SFTAVHAALFFLL  SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF
Sbjct: 1   MASFTAVHAALFFLL--SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120
           FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVK+HKIGKSTLEC
Sbjct: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKEHKIGKSTLEC 120

Query: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180
           AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA
Sbjct: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180

Query: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240
           AVVDSDENRGDIEAQNNDVVSETNPTAAPPPI IP ESELNTTTAANK+LNRNRTRGSRS
Sbjct: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIHIPVESELNTTTAANKALNRNRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSS+
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSI 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360
           RGY+FGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG
Sbjct: 301 RGYQFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360

Query: 361 LGRELGQGSSTAESSRLPV 380
           LGRELGQG+STAESSRLPV
Sbjct: 361 LGRELGQGNSTAESSRLPV 377

[Close]

BLAST of CmoCh05G011630 vs. ExPASy TrEMBL
Match: A0A0A0LFQ4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021560 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 7.2e-172
Identity = 323/383 (84.33%), Postives = 342/383 (89.30%), Query Frame = 0


Query: 1   MVSFTAVHAALFFL---LSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M S TA H    FL   L +  SVSAQSQ SPDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 97  MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFF 156

Query: 61  VAFFSVYLRHCNDSQSNSVRPVT-AAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKS 120
           +AFFSVY+RHCNDSQSN++RP+T AA RSRRA RGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 157 MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 216

Query: 121 TLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRV 180
            LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANLSPQLTESVHRV
Sbjct: 217 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 276

Query: 181 EDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTR 240
           +DS AVV+SD + GDIEAQ+ DVV E   T APP +QI  ESEL TTT  NK+LNR RTR
Sbjct: 277 DDSNAVVNSDTDGGDIEAQSTDVVLE---TTAPPTVQIQTESEL-TTTTGNKALNRTRTR 336

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+EIRKQVVNRKLNRA SMV+LARQ
Sbjct: 337 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQ 396

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGS  
Sbjct: 397 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 456

Query: 361 GEPGLGRELGQGSSTAESSRLPV 380
           GEPG GRELGQG++  ESS LPV
Sbjct: 457 GEPGSGRELGQGNTAVESSMLPV 475

[Close]

BLAST of CmoCh05G011630 vs. ExPASy TrEMBL
Match: A0A5A7U133 (E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00060 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 1.6e-171
Identity = 322/383 (84.07%), Postives = 345/383 (90.08%), Query Frame = 0


Query: 1   MVSFTAVHAA---LFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M S TA H     LF LL +  SVSAQ Q +PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  VAFFSVYLRHCNDSQSNSVRPVTAAA-RSRRAARGLDPAVIETFPTLIYSDVKQHKIGKS 120
           +AFFSVY+RHCNDS SN+VRP+TAAA RSRRA RGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 TLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRV 180
            LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 EDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTR 240
           +DS AVV+SD + GDIEAQ+NDVVSE   T APP +QI  ESEL+TTT +NKSLNR RTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSE---TTAPPTVQIQTESELSTTT-SNKSLNRTRTR 240

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+EIRKQVVNRKL+RATSMV+LARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGS  
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 360

Query: 361 GEPGLGRELGQGSSTAESSRLPV 380
            EPG GRELGQG++  +SSRLPV
Sbjct: 361 AEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of CmoCh05G011630 vs. ExPASy TrEMBL
Match: Q84KA9 (RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 3.6e-171
Identity = 321/383 (83.81%), Postives = 345/383 (90.08%), Query Frame = 0


Query: 1   MVSFTAVHAA---LFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M S TA H     LF LL +  SVSAQ Q +PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  VAFFSVYLRHCNDSQSNSVRPVTAAA-RSRRAARGLDPAVIETFPTLIYSDVKQHKIGKS 120
           +AFFSVY+RHCNDS SN+VRP+TAAA RSRRA RGLDPAVIETFPTLIYSDVK+HKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 TLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRV 180
            LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 EDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTR 240
           +DS AVV+SD + GDIEAQ+NDVVSE   T APP +QI  ESEL+TTT +NK+LNR RTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSE---TTAPPTVQIQTESELSTTT-SNKALNRTRTR 240

Query: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQ 300
           GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+EIRKQVVNRKL+RATSMV+LARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGS  
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 360

Query: 361 GEPGLGRELGQGSSTAESSRLPV 380
            EPG GRELGQG++  +SSRLPV
Sbjct: 361 AEPGSGRELGQGNTAVDSSRLPV 379

[Close]

BLAST of CmoCh05G011630 vs. NCBI nr
Match: XP_022946284.1 (E3 ubiquitin-protein ligase ATL6-like [Cucurbita moschata])

HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF
Sbjct: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120
           FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC
Sbjct: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120

Query: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180
           AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA
Sbjct: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180

Query: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240
           AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS
Sbjct: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360

Query: 361 LGRELGQGSSTAESSRLPV 380
           LGRELGQGSSTAESSRLPV
Sbjct: 361 LGRELGQGSSTAESSRLPV 379

[Close]

BLAST of CmoCh05G011630 vs. NCBI nr
Match: XP_023545580.1 (E3 ubiquitin-protein ligase ATL6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 725.7 bits (1872), Expect = 2.1e-205
Identity = 375/379 (98.94%), Postives = 375/379 (98.94%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           M SFTAVHAALFFLL  SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF
Sbjct: 1   MASFTAVHAALFFLL--SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120
           FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC
Sbjct: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120

Query: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180
           AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA
Sbjct: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180

Query: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240
           AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIP ESELNTTTAANKSLNRNRTRGSRS
Sbjct: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPVESELNTTTAANKSLNRNRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360

Query: 361 LGRELGQGSSTAESSRLPV 380
           LGRELGQGSSTAESSRLPV
Sbjct: 361 LGRELGQGSSTAESSRLPV 377

[Close]

BLAST of CmoCh05G011630 vs. NCBI nr
Match: KAG7030260.1 (E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 723.4 bits (1866), Expect = 1.0e-204
Identity = 374/379 (98.68%), Postives = 374/379 (98.68%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           M SFTAVHAALFFLL  SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF
Sbjct: 1   MASFTAVHAALFFLL--SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120
           FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC
Sbjct: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120

Query: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180
           AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA
Sbjct: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180

Query: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240
           AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIP ESELNTTTAANKSLNRNRTRGSRS
Sbjct: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPVESELNTTTAANKSLNRNRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSS M
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSLM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360

Query: 361 LGRELGQGSSTAESSRLPV 380
           LGRELGQGSSTAESSRLPV
Sbjct: 361 LGRELGQGSSTAESSRLPV 377

[Close]

BLAST of CmoCh05G011630 vs. NCBI nr
Match: KAG6599261.1 (E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 720.3 bits (1858), Expect = 8.6e-204
Identity = 373/379 (98.42%), Postives = 373/379 (98.42%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           M SFTAVHAALFFLL  SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF
Sbjct: 1   MASFTAVHAALFFLL--SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120
           FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC
Sbjct: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120

Query: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180
           AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA
Sbjct: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180

Query: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240
           AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIP ESELNTTTAANKSLNRNRTRGSRS
Sbjct: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPVESELNTTTAANKSLNRNRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKT RGGSIHGEPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTLRGGSIHGEPG 360

Query: 361 LGRELGQGSSTAESSRLPV 380
           LGRELGQGSST ESSRLPV
Sbjct: 361 LGRELGQGSSTTESSRLPV 377

[Close]

BLAST of CmoCh05G011630 vs. NCBI nr
Match: XP_022999119.1 (E3 ubiquitin-protein ligase ATL6-like [Cucurbita maxima])

HSP 1 Score: 717.2 bits (1850), Expect = 7.3e-203
Identity = 369/379 (97.36%), Postives = 374/379 (98.68%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           M SFTAVHAALFFLL  SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF
Sbjct: 1   MASFTAVHAALFFLL--SVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60

Query: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 120
           FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVK+HKIGKSTLEC
Sbjct: 61  FSVYLRHCNDSQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKEHKIGKSTLEC 120

Query: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180
           AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA
Sbjct: 121 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSA 180

Query: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRS 240
           AVVDSDENRGDIEAQNNDVVSETNPTAAPPPI IP ESELNTTTAANK+LNRNRTRGSRS
Sbjct: 181 AVVDSDENRGDIEAQNNDVVSETNPTAAPPPIHIPVESELNTTTAANKALNRNRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSS+
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVILARQSSSI 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360
           RGY+FGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG
Sbjct: 301 RGYQFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSIHGEPG 360

Query: 361 LGRELGQGSSTAESSRLPV 380
           LGRELGQG+STAESSRLPV
Sbjct: 361 LGRELGQGNSTAESSRLPV 377

[Close]

BLAST of CmoCh05G011630 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-72
Identity = 180/406 (44.33%), Postives = 221/406 (54.43%), Query Frame = 0


Query: 11  LFFLLSVSVSVSAQSQFSPDPRSDPYQY-RLSGSMAVIIVILIAALFFVAFFSVYLRHCN 70
           + FLL +S +  A SQ  P P + PY Y RLS +MAVI+VILIAALFF+ FFS+Y RHC+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 71  DSQSNSVRPVTAAARSR----RAARGLDPAVIETFPTLIYSDVKQHKIGKSTLECAVCLN 130
                 V P    ARSR     AARGLD +V+ETFPT +YSDVK  K+GK  LECA+CLN
Sbjct: 75  GVPDAGVSP-AGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLN 134

Query: 131 EFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSAAVVDS 190
           EFEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRANL+ Q+ E           V+ 
Sbjct: 135 EFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAE--------GESVEP 194

Query: 191 DENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRSNRLRW 250
                D+E Q   VV+      AP P Q+               ++  R  G   +  R 
Sbjct: 195 GGTEPDLELQ-QVVVNPEPVVTAPVPEQL-----------VTSEVDSRRLPGVPVDLKRV 254

Query: 251 LFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVV-NRKLNRATSMVILARQSSSMRG-- 310
            F RSH+TGHS+VQPGE TERFTLRLP ++RK+++ + KLNR  S+++L R  SS RG  
Sbjct: 255 KFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRGKP 314

Query: 311 ----------------------------YRFGSGEGSSRGKYYRRLERLDRTSKSDRWVL 370
                                        R G+  GS R          D     DRW  
Sbjct: 315 IDRSRARSDRWLFRKTPSFLWRSRDDGSIRLGA-TGSVRASAVPNSTGSDSVRAGDRWAF 374

Query: 371 SITPPFFTRMSSMKTPRGG-SIHGEPGLGRELGQGSSTAESSRLPV 380
                F  R SS+  PRGG +  GE    +  G   ST+ S RLPV
Sbjct: 375 LRNASFLWRNSSVHVPRGGVNKDGEGTSVKSTGASGSTSGSVRLPV 398

[Close]

BLAST of CmoCh05G011630 vs. TAIR 10
Match: AT5G27420.1 (carbon/nitrogen insensitive 1 )

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-67
Identity = 155/353 (43.91%), Postives = 198/353 (56.09%), Query Frame = 0


Query: 14  LLSVSVSVSAQSQFSPDPRSDPYQY--RLSGSMAVIIVILIAALFFVAFFSVYLRHCNDS 73
           +L + +SVSA    +PD R DPY Y   LS +MAV++V++IAALFF+ FF+VY+RHC  +
Sbjct: 13  VLFLLLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGA 72

Query: 74  QSNSVRPVTAAAR---SRRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLECAVCLNEFE 133
              SV P   A R   +   ARGLD   IETFPT +YS+VK  KIGK  LECA+CLNEFE
Sbjct: 73  VDGSVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFE 132

Query: 134 DDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESVHRVEDSAAVVDSDEN 193
           DDETLRL+PKCDHVFHP CI AWL  H TCPVCR NL+ Q  E    VE           
Sbjct: 133 DDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVET---------- 192

Query: 194 RGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNRNRTRGSRSNRLRWLFP 253
             D+EAQ    V         P +++P                            R  FP
Sbjct: 193 --DLEAQQQSAV-------PVPVVELP----------------------------RVKFP 252

Query: 254 RSHSTGHSLVQPGEDTERFTLRLPLEIRKQVV-NRKLNRATSMVILARQSSSMRGYRFGS 313
           RSH+TGHS+V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ +L R  SS  G     
Sbjct: 253 RSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRSG----- 301

Query: 314 GEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRM---SSMKTPRGGSIHG 358
                     ++++R    +KSDRW+   TP F  R     S++    GS+ G
Sbjct: 313 ----------KQVDR--SRAKSDRWLFRKTPSFLWRNRDDGSIRLGGTGSVRG 301

[Close]

BLAST of CmoCh05G011630 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 3.3e-52
Identity = 133/323 (41.18%), Postives = 178/323 (55.11%), Query Frame = 0


Query: 39  RLSGSMAVIIVILIAALFFVAFFSVYLRHCND-----SQSNSVRPVTAAARSRRAARGLD 98
           R   +MA+++++L++  FF+ FFSVY+R C +        N        A +R+ ARGLD
Sbjct: 58  RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLD 117

Query: 99  PAVIETFPTLIYSDVKQHKIGKSTLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLA 158
            ++IETFPT  YS VK  +IGK  LEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL 
Sbjct: 118 ASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLR 177

Query: 159 SHTTCPVCRANLSPQLTESVHRVEDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQ 218
           SHTTCP+CRA+L P   ES+  ++    V D                    P + P   +
Sbjct: 178 SHTTCPLCRADLIPVPGESIVSIQIPGLVNDP-------------------PGSDPNGDR 237

Query: 219 IPAESELNTTTAANKSLNRNRTRGSRSNRLRW----LFPRSHSTGHSLVQPGEDTERFTL 278
           I +    +     + +L  N++   RS    W    +F  S  TG    Q  E+ +RFTL
Sbjct: 238 IRSLGSPDARLIESVALTCNQSMPRRSMSTGWNLAGMFTNSDRTG----QHSENLDRFTL 297

Query: 279 RLPLEIRKQVVNRKLNRATSMVILARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKS 338
           RLP +I  ++VN  L++    V L +  SS RGYR GS  GS R  +Y   ER D+  + 
Sbjct: 298 RLPQDIHNKLVNPNLSKV--HVALPQVMSSTRGYRTGS-LGSERNYFY--YERFDQDGRL 352

Query: 339 DRWVLSITPPFFTRMSSMKTPRG 353
           DR   SITPP+ T   +  +P G
Sbjct: 358 DRRPFSITPPYRTSSINHMSPGG 352

[Close]

BLAST of CmoCh05G011630 vs. TAIR 10
Match: AT1G22500.1 (RING/U-box superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-47
Identity = 137/357 (38.38%), Postives = 188/357 (52.66%), Query Frame = 0


Query: 1   MVSFTAVHAALFFLLSVSVSVSAQSQFSPDPRSDPYQYRLSGSMAVIIVILIAALFFVAF 60
           MV  + V     FLL +   V A S+F  + R+       S + A+I+++L++  F +  
Sbjct: 1   MVVMSRVSFYSSFLLLLLEVVVASSEFDDEGRTS-----FSPTTAIIMIVLVSVFFALGC 60

Query: 61  FSVYLRHCND---SQSNSVRPVTAAARSRRAARGLDPAVIETFPTLIYSDVKQHKIGKST 120
            SVY+R C        +   P       +    GLD +VIETFPT  YS VK  +IGK  
Sbjct: 61  ISVYMRRCLQHALGMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEA 120

Query: 121 LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTESV-HRV 180
           LEC VCLNEFEDDETLRLIP+C HVFHP CIDAWL S TTCP+CRANL P   ESV   +
Sbjct: 121 LECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVSSEI 180

Query: 181 EDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTT-AANKSLNRNRT 240
              A     +  R  I+     V++             P E  +++     N+S+ R   
Sbjct: 181 PGLARETGQNSLRTPIDDNRKRVLTS------------PDERLIDSVAWTGNQSMPR--- 240

Query: 241 RGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATS--MVIL 300
              +S    W     +S   S  QP E+ +R+TLRLP EI  Q+VN  L +  S   + L
Sbjct: 241 ---KSMSTGWKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLAL 300

Query: 301 ARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTP 351
            ++ SS+RG+R GS  G+ +  +Y   ER D+  + DR   SITPP+ TR  S+++P
Sbjct: 301 PQERSSVRGFRTGS-LGTEKNYFY--FERFDQDGRLDRRPFSITPPYHTR--SIQSP 329

[Close]

BLAST of CmoCh05G011630 vs. TAIR 10
Match: AT2G35000.1 (RING/U-box superfamily protein )

HSP 1 Score: 180.3 bits (456), Expect = 3.0e-45
Identity = 135/367 (36.78%), Postives = 194/367 (52.86%), Query Frame = 0


Query: 11  LFFLLSVSVSVSAQSQFSPDPRSDP--YQYRLSGSMAVIIVILIAALFFVAFFSVYLRHC 70
           L FLL + +  S    F     + P   + + +  + V+I +L   +FF+ F S++ R  
Sbjct: 16  LLFLLLLLLLQSVPYGFGQTQTTPPGTTKTKPNDPVVVVITVLFLVIFFMVFGSIFCRRS 75

Query: 71  ND--SQSNSVRPVTAAARS------RRAARGLDPAVIETFPTLIYSDVKQHKIGKSTLEC 130
           N   S+S+  R   A A S      R  ARGLD   IETFPT +YS+VK  +IGK  +EC
Sbjct: 76  NAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGKGGVEC 135

Query: 131 AVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANL-------SPQLTESV 190
           AVCL EFEDDETLRL+P C HVFH +C+D WL+ H+TCP+CRA+L           TES 
Sbjct: 136 AVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLNQQGDDDDSTESY 195

Query: 191 HRVEDSAAVVDSDENRGDI----EAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKS 250
              +       +D  RG +    +A   D V+ +N    P                    
Sbjct: 196 SGTDPGTISSSTDPERGMVLESSDAHLLDAVTWSNSNITP-------------------- 255

Query: 251 LNRNRTRGSRSNRLRW-LFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRAT 310
             R+++ G  S ++   LFPRSHSTGHSL+QP  + +RFTLRLP ++R+Q++  K +R  
Sbjct: 256 --RSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSRTM 315

Query: 311 SMVILARQSSSMR-GYRFGSGEGSSRGKY-YRRLERLDRTSKSDRWVLSITPPFFTRMSS 354
             V L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R  S
Sbjct: 316 GHVALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRSGS 352

The following BLAST results are available for this feature:

BLAST of CmoCh05G011630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXX9	1.8e-71	44.33	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q8LGA5	5.1e-66	43.91	E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ...	[more]
Q84W40	4.6e-51	41.18	RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2	[more]
Q9SK92	2.0e-46	38.38	E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ...	[more]
O64763	4.2e-44	36.78	E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV...	[more]

BLAST of CmoCh05G011630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3D2	5.6e-209	100.00	E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita moschata OX=3662 GN=LOC111450...	[more]
A0A6J1KG60	3.5e-203	97.36	E3 ubiquitin-protein ligase ATL6-like OS=Cucurbita maxima OX=3661 GN=LOC11149359...	[more]
A0A0A0LFQ4	7.2e-172	84.33	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021560 P...	[more]
A0A5A7U133	1.6e-171	84.07	E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
Q84KA9	3.6e-171	83.81	RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo OX=412675 PE...	[more]

BLAST of CmoCh05G011630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946284.1	1.2e-208	100.00	E3 ubiquitin-protein ligase ATL6-like [Cucurbita moschata]	[more]
XP_023545580.1	2.1e-205	98.94	E3 ubiquitin-protein ligase ATL6-like [Cucurbita pepo subsp. pepo]	[more]
KAG7030260.1	1.0e-204	98.68	E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6599261.1	8.6e-204	98.42	E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022999119.1	7.3e-203	97.36	E3 ubiquitin-protein ligase ATL6-like [Cucurbita maxima]	[more]

BLAST of CmoCh05G011630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05200.1	1.3e-72	44.33	RING/U-box superfamily protein	[more]
AT5G27420.1	3.6e-67	43.91	carbon/nitrogen insensitive 1	[more]
AT1G72200.1	3.3e-52	41.18	RING/U-box superfamily protein	[more]
AT1G22500.1	1.4e-47	38.38	RING/U-box superfamily protein	[more]
AT2G35000.1	3.0e-45	36.78	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 120..161 e-value: 5.3E-6 score: 35.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 119..162 e-value: 8.5E-14 score: 51.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 120..162 score: 12.872856
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 79..168 e-value: 7.9E-22 score: 78.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..379
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 10..317
None	No IPR available	PANTHER	PTHR14155:SF544	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 10..317
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 119..162 e-value: 1.1627E-20 score: 82.3579
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 119..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G011630.1	CmoCh05G011630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane