CmoCh05G011620 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G011620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	alpha-crystallin domain-containing protein 22.3-like isoform X1
Location	Cmo_Chr05: 9176322 .. 9186037 (-)
RNA-Seq Expression	CmoCh05G011620
Synteny	CmoCh05G011620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGCGAGACTCCATTTCCTTTCCAAGTCTCGCATTGTTTCTTCTCTTTTCTTTTCCCTCCCACGGCAAGTTCATACAATTTCGAGACGGCTGAGTAATTGGGTGAAGGAGAATCAAAGAAACCAATTCAAAATGCATTCATTTGGGTACAGAGCCAACGCTTTGCTGACCTTTGCGGCTACAATACTCGCCGTCATTTGTGCTATAGCTTCCTTCTCCGATACCCTCAATTCACCTTCACCCACAGCACAAGTTCAGGTCTCTCTTCTTGTTCCCCTTCTTTCTGGGTTTTCCCCTTTAGATCTGTGCTTGAATTCTCTTGGATTTTTGGTTCGATTGCGAGACCCATTTGGTGATTTGATTTGGTTTTCTTGTTTTTTGGGTCTTAGGTTTTGAGCATCAACTGGTTTCAAAGCCAACCCAATGGAAACGATGAGGTATGATCGATTTCGCCTGTTTCTTGTCTCTTGAGTTTGTGAAATTTTGTGTGTGAAGAGGGATTTTTAGGTTAATTAAGTAGGGCATTCCAGTTTCCTAACGTGTTGAGTTTTATGACCCTTTTCTTTATCTTGTGTACTACATGATTTGCTATTTGATGTGATGAACTGGGACAGTTGTCTTTAAAAATTATGTAGAAGAACCAATTTGGTTATTGGAGACAGGGTAGGGCATGTAGCTTAGAAAGAGCAATGATGTGGTATTTCCTTGTTCGAATCCTCTCTCGCCCACAGCGAGCCAAAAACGGAAGATTTTTCCCTTGGGTGTATGAAAATCATGGTTGGGGAAACTTTTATGAGCTTCCATCCTCTTAGGATTGATATGACTATGAAATGTTTACGAAATGGTTAGAATATGGGAACGATGTATGTATTTATACATTGTAATATAATATGAGAATGATATGATATAGGTTATGGTACGATAGGTTTGATGAATTGATATAGCTATGATACGATGTGTTAAAGGCACGCTCGGGATATGCTATGTGACTTTTATGATTTACGACGTGCATGATGTGGAGTGTAATGTCTGAAAATATGTGAATGATATGATATGATATGGATGCAAAGGGTTTAGTGGAGTCTCAAAGCTTGTCAAGGCTGATCATCTTCTCTTTGAAGACCCTCTAGTTCCTCTCAAGCCAAAACTTCCATAGCCTTGCCACAGTATCATTAGGCCAAATAACTATGGCCGTACTTCTTAAAGAAGTATAAAAAACGTGAGATCCCCCGTCGGTTGGGGAGGAAAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAATCTTGAGGAGAAACCTGAAAGAAAAAGTCCAAAGAGGACAATATCTGCTAGTGATGGGCTTGGGTCATTACAAATGGTACAAGAGCTAGACATTAGGCGATGTGTCAGCGAGGAGGCTGAGCTCCAAAGGGAGGTGAACATGAGGCGGTGTGCTAGCAAGGACGCTGGACCCCAAAAGGGAGTGGATTGGGGGGTCCCACATTGATTGGAGAAGGGAACGAGTGCCAGCGAGGATGCGAGGTCCTCGAAGGGGAGTAGATTGTGAGATCTCACATTGGTTGAGAAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACAGTCGCGTTTTAAGACCTTGAGGGAAAACCAAAAAGGGAAAGCCCAAAGAGGACAATATCGGCTAGCGGTGGGCTTGGGCCGTTTCAACTCTTAGTACTTTGAAATTGAGTATGAATACTTTTTCGTGGAGTCGATAAACTTCCAGCAAAATTCCCCCATAAGCTAGACTTCAATGACTCCATCATCTTCATGAACCAGCCAATTTTCAAGGCTTTTGATGAATATGTATGCAATTTTATCTCCGAGTAATTACTCTCTATTCATGATCAGATCTCTAAAGAGATGATATATGATTCTTGTGTTCTTATTGCATTCATGAAACGGTGGACTCTGTGCGAGAGCGATCGACTAGCTTATTATCCCGAAACAATGTAATCCTTTTTTCTTGAGGATACTTTAGTTCTTTGCTGCACTTTTTTCAACCGAAGTGCTTGATAATGAACTGTAAACAAAATAATTAGTTTTCAGATTCTTTGCGAGAGGACTAATGAGATGTTAATCATAAAACAATGCAAGCACCTTTTGTTGATTATTTGAAAGAACGTGCCTTCTTTTTGCAGGTTAGCATGACTTTGAACATATCAGCTGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTGCACTGGCAACTGATGTTCCTCTATTATTCTCTAATAATCCTTTGCGTAGAGTATTGTTGGTTATTTCTGATAGTTATAGATAATGAATTGATATAACTCGTTTGTTTATTCACACGATACATAGTTGAGGAAGAATTCGATCTAAAACTTCACTCAGATAGTGTAACGGCCCAAGCCTACCGTTAGCAGATATTGTCCTCTTCAGGCTTTCCTTTTGGGCATCTCCTCAAGGTTTTTAAAACGCCTCTGCTAGGGAGAGGTTTCCACACCCTTATAAATAATGTTTTGTTTTCCTCCCCAACCGATGTGGGATCTCACAATCCACTCCCTTCAGGGCCCAGCGTCCTCTCTGGCACTCGTTTCCCTCTCCAATCAATGTGGGATCTCACAATCCACCCCCCTTCGGGGTCCCGGTGCCCTCGTTGGCACTCGTTCCTCTCTTCAATCGATATAGGATCTTACAATCCACCCCCCATCGGGACCCAGCGTCCTCGCTGGCACACTTCCTAGTGTCCACCCCCCTTCAAGGCTCAACGTCCTCGCTGGCACCCGCCCGGTGTCTAGCTCTGCTACCATTTGTAACGGCCCAAGCTCATCGTTAGTAGATAGTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCTCTCAAAATTTTTAAAACGCGTTTGCTAGGGAGATGTTTCCACACCCTTATAAATAATGCTTCGTCCTCCTCCTCAACTGATGTGGGATGTCACAGATAGTATCTTCTCTATCATATTCTTTTTTTTGCTACATACTCTCTGACTTGAGCCCTTCCACCAATCTAACTCACTAGTTACATTAAAGCCCACCCCTTATGTTCAAGCTAAATGCTAAGTCATTCTCCCTTCACTCTCTTCTAATTACTACCATCAGGGTCTTCTATCAGTCTCGAACAAACTTTCGTCACATCTGAAGTTCATAGCATTTCTAATAGCCAGACGTCCATTCTACAGAGGGCGGTCATCGTGGCTTCTTGCCACTATTTGTGTATTCTGTGAACTCCGTCGTTCAAGTCAATAATAGTGTCGGGAATCGCATTGGTTTTATCTGTTTCCATTCATATTTCGTAAACAATAATGAAACCTTTCCTTGTTGAGATTTGTCAGTGTTATATTTTACCAAGCAGTGAACTGATTGCATAATCTTCATTTTAACATGTGGAACAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAGCGAACTCCTTGAATCAGGTGAGTTTCTGTTTCTTTTTAAGTTTCGTCTCTTTGGCAACTCAACTTCCCATCAATTTAATCCCTTCCTGAAACATCCTCTGCAGATCTCACTTTGGGACGGTATCATACCTTCCAAAGAGATAGCCAAATTTCAGATCCATACTTCAAACAAGTATCGTTTCGTTGACCAGGTTCGTCGCCTCCGACCCTTTTGCAAAACTTCTCCAACCAATTTAGTTTAGCCAAGAGTGACTAAGTTGGATATCTATCTCCTTATGCAGGGAAGCAATCTGAGAGGCAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGACAAATTGGTGATGTCCGGATACCACTTGCCAAAGGAATATAGATGAGGAGATTTCTCCATTCATTGTAATTTCTGAACTAAAGTTTTACATAGGTTTTAGCAGCATCACCCTATTAATCAACAACGTTACAAACACTGAACATTTCCTGAAGGGAACAGGAAGAGGAGGAATTGAAGTGGCGTTTTCCAAGGCCATTATGAATTGATATAACACAGTTTGGTTCCTTTTCCCCCCCTCCATCTCTTAATTGCATAGTCTTTGTGGTGGCAGATAGCCTTAAATTTAGGCACTCATCTGCATGAACTCCAAATGTGAGTGATCTCTTCTTGAGATTTGAGTATTTATAATTACACCACCATACCTGAAGCAATGGAGGAGTAAATCTTGTACTTGTAGCAGCTACTAGATTCCCCCCAATCTTCTTCACATGGTTGTCTAGGAAGAAATAGCATTGCTGGACCAAATTTCTTTTCCACAATATCGGAGTCAGATCAGAGTCAGATGTGGTGTGTGGAGGTGTCAAATTACTATTATGTGAAACACTATGAACTATGAACTGATGGTGTAATAGAGTCGAGTCGTAGATCATCAGGAGAGAACTGTTTATTTGATGTATTGTCTGCGGGTTCAATACCATTGAGTGAATGTGTCAGCTCAAGACCAATGCTAGTAGATATTATCCTTTTTGGATTTTCCCTTTTGGGTGGTTTGCATCTTGGTTTCGTTGTGTGCAATTAGCCGCTTTGTTAGCCGCTTTGTGGCTTGGTGGCAACATCTGAAACATATTCCTGTCCCCGTTAAGCACTCACCCCAGTGCTTGAGGCTGCACCTAGGGCATGTAGGTACACCTTCACCTTCCTGCTCACGGTTACCTGGGTGTCCACGAAGGTTTCGCTCCATCTTAGTGGTATTCCTATCTGGTCTCTTTCCCTGCTGTTTCCCCTTGTCCATCAAATGATAATACGTCGTGCTTCCGCGTATACAAAGGAAGCTTGAGCTACGACAAAACTTTGTAACTCATATGAGACTTGTGATGAAGCGATCCGTCTCTATCTTCTCTGTACAACAAACTCCTGAGCGATCATGTTGTAGGGCAATATCTGACCATCAAATGACCAATTCAAATTTCAAATCCTAATTTAAATCTTGGGTATGAGATAGTCTTATCGAGATGTAGAGGAATGTCGGGGACCATCAAATGTCTAAGTCGAATTCCAGATTATTATTTTTATCGAAGATATAGAGCATTACTGACAGGGAGAAAAATTACCTTGTAGTTTAGATCTAAAGTCAAATGTCAAATGTTTGAGTTTCTCGGATATAAAGTCAAATGTTTGAATGTCTTCGAAAGTCTACTTTCATTAATCAAATTATTAATTTAAGAATTTAATTAACATTTTTCCATTGGCTGTCTTAGTTTCAACTTAACTTAGTGAACGTTACAAGTATCGGTAGAATTTAAATTTAAATTTTGGATATTAAATGGATAATGCGATTTAAAATCCAAATTTAGAAATTAAAACTAAAAAATAAAATAAAATAAAAAACCGACGTGGCCATCTCAGCCCTATTCAATGCTGCTTATAAATTGAACACCCACGATCACTTCTCTGTCAGTGTTACTCGATACGTTGACGAAATCGGAACTTCCTCTTCCACCTGCTACTGCCACAAGCTTTCAAACTCTCCGGCGGCTCTCCGATGACTTCTCCGGCTAGGTATATTCTTCTCTTGATGTTTGATGTGACTATCGTATCTTTGTCTCTGTATCTGTCTGTTCTCTTTTAAATCATCGGTTAATGTAGCAAAGGGGGGAATATCTCTTCTCTGATTAATTATGGCCTTCTTGTTATTTGTACTTGAACATTATATTTATGAAGAAGATGAGTATTCGGGTAAAGGTTTTTGGTGATAATGAGAAATGAACTGTAGTTTCAGATTTTTACGAAGAATTGATGGAAATTTTTGCGTTCTGTTCGTTTGGAAGTGAATGTAGGTATATGTAGGGATCGTTTTTATGTGTTTTTGTTCTGAATTAGTGCTTAATGGTGAGTGAGAACTATTGGTTTTGGGTTTGCTTAAGAGGGGAACGTGGTGAGATGAAAATCTGGGGGAGCTTTGTTTAATATCTGAAGCATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGTAAGACACGTTTTAAAACTTTGAGGGGAAGCTCGGAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGTTGTTACAAATGATATTAGAGGCAGGCACCGAACAGTGTGCCAGTGAGGATGCTAGCCCCCAAGGGGGGTGGATTGTGAGATCTCACATTGGTTGGAGAGGGGAACGAAATATTCCTTATAAGGGTGTAGAAACCTCTCCCTAGTAAACATGTTTTAAAACCTTGAGGGGAAGCTCGGAAGGGAAAACCCAAAGAGGACAATATCTACTGTATGGTTCTATTCATATTTTGGGACGAGTTATGCTCTTTGGTTGACATGGAATCGAATCGATGGTAAGACGACCCTATTCAATACACTTATTACCAAAGGGAATGAGAACCTTCCAACCAGGCAGAATGGAAAATTCTTCCAACTGGATATAAGATCAGTGAGATTCTGAGAATATAGTCCTTTAAAGAATTTGTACACTTGCACCGACTAAAAGCAGTAAAAAGCACCTAGTCTAAGAAGTAGTCAAAAGGCTTAGCTTTGTCATTGAAAAGGCGGTCGTTTCTTTCTCTCTATAGAATCCAGCAGAAAGCTTTGTCCGAAAGATTCAGTTCATGGGTTCATGAGTTCTTTAGTGTGCCCGTTTTAAAAAGACTCGGACCGGGGAATACTGTAATTTCTCATTTGGAAAGTATATTTTCAGACTTCCCTTAAATTTTGCCTTAGCGGGTCAGGTCAAATAAATTAGTGTTGAACCATGAGGTTTTGCATAAAAGCATAGAGGTATGTTTATTGAGATGCATTCTAATTCGTTTGGTCCATATCCAACTTTTAAGAAACTTTCATATATTCTGGAATTTGCTCTGCTTCTAGATGGTGTTTAGAGAACTTTTATGCTTTATGAGATGCATTTGGTCCATACCGACGTTTTTAATTGCTTGTCCTTGTTGAATTTTGTATTAGTTCTAGAGGCTTATGTCCATTTGACAACAGATTTTAAAATCTACTTGAGTTTTTTTTTTTTTTTTTTTTGCCTGACATGTCTCAGGTTCAGAAGCCAAATTATGCATTATAATCTTAACCCTTACCCTAAATGTCAGAGGTTTGAATCTTTATCCACGTCTTGACCTAAAAAAAAGGCGACTCGGGGCAAATTATCACTAATAATCTTAAATTTTAAGATATTTTCTTCTTAACCTTTTCTTAATCATAAACGACAAGCTTCATATATTCTGTATTACAGCATAAAGTAAATGAGTGTTAGTTTCTTAAAAGTCGGCTATGATACAAGGGAATTGCAAATGTATGTGCATTGTAATGAAACATGTTTTGTTCTGATTATCTGTTTTCTGAGGAAATCCTTTATAGGGAATGTTAACAACTTAGAATTCAAATTAACTGTTATGACAATTAACCAAATTTGATCAATTTTGTTCTTTGTTCACTTGCAACCCCAGTATGTACCTCTTTCTTGGAAACTTACACCTTTCTCTATTTTAAGAATTTCTATTTGTTTGTCTCGTTCTCTCTCATGCTCATGAATACTCACCCAGACATCCAAATTCACATAATATCTACTGATAGCATAGGCCATCGCTACAGTATTCGATAGTCCAAGCATATCATTAACCTCGTGCCATTTTTCGTAGCGTTGGCATACTCATTTATATCTGTATCTGTCCCTGTAGCTTAGCCTCCAGGCATTCGCCTTTGTCTTCTTATGTAGTAACGTGAATACAACTCTGGCTTTGGAAAGAAACAAGTACATTAAGTGAATCCTCTCCGTGACATTTTGGCTGCTGTTTGAGAAAAAGTCATTTGTGCTTGAGAAATTTATTTTTTTGAAGAGACTGTGTGTAAGGAGAAATTGTTGGAGGTGGGTGTCGCAATCTGCTTGTATTTCTTTCACAGCCCATCTTCCATCTGTTGTTTCATCCATATCAGCTTCAAGACTAAAATATCCTTTCTTTTCCCCACAGATTTTCTCTTGACTAAATCGAAAGCTTAGGCCGAATTATATATTTTTGTTATGCTATCATACTTTCCTATCTTTTACCTTCTACTTATGATTATGCCTTTGTTCATTATGTCATGTGTCTCATATCATGCTGGTGACATCTTTCATGTTCTTCTCCCTACTCTGCGAACAAGACGAGCATGTCGCCTGCACTCCAAAAACACTATATCACATGCACAGAAGAGGATAGAAATTTCCAACACAACTTTTGCTTTTGGCAACGACTGTGTATTAATCTCAGACCTCTTATATTGAGATTGTATTAGATGTCTATGTTTCCCTCCTCACATTACCATTAGAACACTTCCAGGGCGATTTTTTACTTATGAGTTAATTGTTCTTATTGGACTTGAATGGTGATTGAACATCCTGATGTGAGGGAGATCCGTCTGTTTTTTTTTTCGTCCTTAATGTTTGTTCAATGAATGGTATGACAGAGAGCCAGCAGACTATGTTGAGATCATATTGCTCCTTGTATTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCATACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAAGTGAGTGTTTGTTGAAACTGATCAATTTTCTCACTTCGCCACCATAATGTGCAACGTTTCGTGTTATTTGTAATATGGGCACAAGATCAGTTCTCTTTTCTGTTTTTCATTGTCGCAATCGCATTGAGTTGTGTTTGGTGCACATGAAAATTATCTATCTGACCAGACTATTGTTTCATGGCAGCAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGATAACAGGCTTAAATGATTTTGGGGTGGAGGGTGTGGTAGTGGGTTATAATACAGAGATGATTTAGGCTCATTTTGGTATGTTGTTTAGGAAAAGGCCTTTCTGTAGAAGACAGTTATTCATTAAGAAACATGGCCTATTAGGAAGGAAGTTAGATCATTTTCTCTCTCACAGTTCATAGAAGGAGATGCTTTGAAAGGACCAGCTTAGTTTTCTCGTCCAATCTCCCAGAAATTCATCACAATGCTATGGAATTTGTGATTTTGTTAAAAGATCTGATGTATAGATAACAAGCGACTAGTTCATTTTACTATCCAGTTTCATGATCTCTGGATCTCTCTCTCCATCTGTGACTGAAACTGTGTAACAGGTCACATAGCTGAAAGAACCTCACTTTTGTTACAAG

mRNA sequence

CGAGCGAGACTCCATTTCCTTTCCAAGTCTCGCATTGTTTCTTCTCTTTTCTTTTCCCTCCCACGGCAAGTTCATACAATTTCGAGACGGCTGAGTAATTGGGTGAAGGAGAATCAAAGAAACCAATTCAAAATGCATTCATTTGGGTACAGAGCCAACGCTTTGCTGACCTTTGCGGCTACAATACTCGCCGTCATTTGTGCTATAGCTTCCTTCTCCGATACCCTCAATTCACCTTCACCCACAGCACAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAGCCAACCCAATGGAAACGATGAGGTTAGCATGACTTTGAACATATCAGCTGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAGCGAACTCCTTGAATCAGATCTCACTTTGGGACGGTATCATACCTTCCAAAGAGATAGCCAAATTTCAGATCCATACTTCAAACAAGTATCGTTTCGTTGACCAGGGAAGCAATCTGAGAGGCAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGACAAATTGATAGCCTTAAATTTAGGCACTCATCTGCATGAACTCCAAATGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCATACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGATAACAGGCTTAAATGATTTTGGGGTGGAGGGTGTGGTAGTGGGTTATAATACAGAGATGATTTAGGCTCATTTTGGTATGTTGTTTAGGAAAAGGCCTTTCTGTAGAAGACAGTTATTCATTAAGAAACATGGCCTATTAGGAAGGAAGTTAGATCATTTTCTCTCTCACAGTTCATAGAAGGAGATGCTTTGAAAGGACCAGCTTAGTTTTCTCGTCCAATCTCCCAGAAATTCATCACAATGCTATGGAATTTGTGATTTTGTTAAAAGATCTGATGTATAGATAACAAGCGACTAGTTCATTTTACTATCCAGTTTCATGATCTCTGGATCTCTCTCTCCATCTGTGACTGAAACTGTGTAACAGGTCACATAGCTGAAAGAACCTCACTTTTGTTACAAG

Coding sequence (CDS)

ATGCATTCATTTGGGTACAGAGCCAACGCTTTGCTGACCTTTGCGGCTACAATACTCGCCGTCATTTGTGCTATAGCTTCCTTCTCCGATACCCTCAATTCACCTTCACCCACAGCACAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAGCCAACCCAATGGAAACGATGAGGTTAGCATGACTTTGAACATATCAGCTGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAGCGAACTCCTTGAATCAGATCTCACTTTGGGACGGTATCATACCTTCCAAAGAGATAGCCAAATTTCAGATCCATACTTCAAACAAGTATCGTTTCGTTGACCAGGGAAGCAATCTGAGAGGCAAAGAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAGATGTTTGCAGACAAATTGATAGCCTTAAATTTAGGCACTCATCTGCATGAACTCCAAATGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCATACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGA

Protein sequence

MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNKYRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLIALNLGTHLHELQMVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVYCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPKR

Homology

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BLAST of CmoCh05G011620 vs. ExPASy Swiss-Prot
Match: Q53YF3 (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.8e-69
Identity = 123/156 (78.85%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFA TILA ICAIASFSD  ++ +P+AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TLNI+ADLQSLFTWNTKQVF F+AAEYET  N+LNQ+SLWD IIP KE AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLI 157
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFADK++
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIV 156

[Close]

BLAST of CmoCh05G011620 vs. ExPASy Swiss-Prot
Match: Q9MA96 (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.5e-67
Identity = 120/156 (76.92%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MH+FGYRANALLTFA T LA ICAIASFSD  ++ +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETP NSLNQ+SLWD IIP+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLI 157
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFADK++
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIV 156

[Close]

BLAST of CmoCh05G011620 vs. ExPASy Swiss-Prot
Match: Q84K79 (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 GN=ACD22.3 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.7e-56
Identity = 109/196 (55.61%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 174 RKNEAESLNIRH-RILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKV-GPAMVYCP 233
           R+N +   N R+ +IL V P+NSMPYIG P+ H+ + SS R+ D  ++ KV GPAM++ P
Sbjct: 11  RENNSFPDNTRNPQILEVTPLNSMPYIG-PVTHASM-SSNRMND--SVEKVGGPAMIFLP 70

Query: 234 LTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTD 293
             +S ++ +++S +KTGV+LTG+AAMG++G  IG VDI E+E+SY+FRV+LPGV+RD+ +
Sbjct: 71  SDSSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKE 130

Query: 294 SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQF 353
            FSC++EPDG + IKG TTTGE  VCK++Q+F+M ++NLCPPGHF+I FQLPGPV+N +F
Sbjct: 131 -FSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEF 190

Query: 354 SGAFGADGILEGTVPK 368
           +G FG+DG+LEG V K
Sbjct: 191 NGNFGSDGVLEGVVKK 201

[Close]

BLAST of CmoCh05G011620 vs. ExPASy Swiss-Prot
Match: Q8RWL4 (Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-29
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 261 GPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESIVCKNS 320
           G ++G +DIGE +++Y FRVSLPGV RD+   FSC++E +G V ++GVTTTG   V + S
Sbjct: 237 GLMVGLMDIGECDDAYLFRVSLPGVKRDER-YFSCEVEDNGKVLVRGVTTTGGKRVKRYS 296

Query: 321 QVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPK 368
            VF MQ+R+LCPPG+FS++F+LPGPV+  +FSG FG DGILEG V K
Sbjct: 297 HVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMK 342

[Close]

BLAST of CmoCh05G011620 vs. ExPASy Swiss-Prot
Match: Q9LGB4 (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 6.3e-29
Identity = 71/155 (45.81%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHS+  R     T AA +L   C  AS  D  + PS  AQ  V  IN F  Q NGND   
Sbjct: 1   MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGND--- 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
                             +VFVFL AEYE   NSLNQ+SLWD IIP K+ A  Q+   +K
Sbjct: 61  ------------------KVFVFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKL 156
           Y  +DQGS+LRGK+  L LHWHVMPK G M  D++
Sbjct: 121 YPLIDQGSSLRGKKVQLVLHWHVMPKAGVMIRDRM 134

[Close]

BLAST of CmoCh05G011620 vs. ExPASy TrEMBL
Match: A0A6J1G4J2 (alpha-crystallin domain-containing protein 22.3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450737 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.5e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY
Sbjct: 7   VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
           TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL
Sbjct: 127 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 187 QFSGAFGADGILEGTVPKR 205

[Close]

BLAST of CmoCh05G011620 vs. ExPASy TrEMBL
Match: A0A6J1KA02 (alpha-crystallin domain-containing protein 22.3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493606 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 2.2e-109
Identity = 196/199 (98.49%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEA+VKVGPAMVY
Sbjct: 7   VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAMVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTS+KWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSQKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
           TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQS+NLCPPGHFSITFQLPGPVNNL
Sbjct: 127 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 187 QFSGAFGADGILEGTVPKR 205

[Close]

BLAST of CmoCh05G011620 vs. ExPASy TrEMBL
Match: A0A6J1G4M2 (alpha-crystallin domain-containing protein 22.3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450737 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 5.4e-108
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY
Sbjct: 7   VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
            +SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL
Sbjct: 127 -NSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 187 QFSGAFGADGILEGTVPKR 204

[Close]

BLAST of CmoCh05G011620 vs. ExPASy TrEMBL
Match: A0A6J1KIR4 (alpha-crystallin domain-containing protein 22.3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493606 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 7.9e-107
Identity = 194/199 (97.49%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEA+VKVGPAMVY
Sbjct: 7   VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAMVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTS+KWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSQKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
            +SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQS+NLCPPGHFSITFQLPGPVNNL
Sbjct: 127 -NSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 187 QFSGAFGADGILEGTVPKR 204

[Close]

BLAST of CmoCh05G011620 vs. ExPASy TrEMBL
Match: A0A0A0LGB8 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021590 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 2.9e-101
Identity = 181/199 (90.95%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEA+S N R RILNVAPINSMPYIGPPLPHSY+PSSPRVEDPEA+VKVGPAMVY
Sbjct: 7   VEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTS++WD IVSA+KTGVSLTGTAAMG+VGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSQEWDDIVSATKTGVSLTGTAAMGKVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
           TDSFSCDMEPDG VKI+GVTTTGE+IVCKNSQ+FRMQS+NLCPPGHFSITFQLPGPVNNL
Sbjct: 127 TDSFSCDMEPDGQVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEG+V KR
Sbjct: 187 QFSGAFGADGILEGSVAKR 205

[Close]

BLAST of CmoCh05G011620 vs. NCBI nr
Match: KAG7030258.1 (Alpha-crystallin domain-containing protein 22.3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.5 bits (1051), Expect = 3.2e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY
Sbjct: 12  VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 71

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 72  CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 131

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
           TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL
Sbjct: 132 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 191

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 192 QFSGAFGADGILEGTVPKR 210

[Close]

BLAST of CmoCh05G011620 vs. NCBI nr
Match: XP_022946766.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 409.5 bits (1051), Expect = 3.2e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY
Sbjct: 7   VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
           TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL
Sbjct: 127 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 187 QFSGAFGADGILEGTVPKR 205

[Close]

BLAST of CmoCh05G011620 vs. NCBI nr
Match: XP_023545831.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.3 bits (1048), Expect = 7.0e-110
Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY
Sbjct: 7   VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
           TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQS+NLCPPGHFSITFQLPGPVNNL
Sbjct: 127 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 187 QFSGAFGADGILEGTVPKR 205

[Close]

BLAST of CmoCh05G011620 vs. NCBI nr
Match: XP_022999132.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 4.6e-109
Identity = 196/199 (98.49%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEA+VKVGPAMVY
Sbjct: 7   VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAMVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTS+KWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSQKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
           TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQS+NLCPPGHFSITFQLPGPVNNL
Sbjct: 127 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 187 QFSGAFGADGILEGTVPKR 205

[Close]

BLAST of CmoCh05G011620 vs. NCBI nr
Match: XP_022946767.1 (alpha-crystallin domain-containing protein 22.3-like isoform X2 [Cucurbita moschata] >KAG6599258.1 Alpha-crystallin domain-containing protein 22.3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-107
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 170 VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 229
           VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY
Sbjct: 7   VEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVY 66

Query: 230 CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 289
           CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ
Sbjct: 67  CPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQ 126

Query: 290 TDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 349
            +SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL
Sbjct: 127 -NSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNL 186

Query: 350 QFSGAFGADGILEGTVPKR 369
           QFSGAFGADGILEGTVPKR
Sbjct: 187 QFSGAFGADGILEGTVPKR 204

[Close]

BLAST of CmoCh05G011620 vs. TAIR 10
Match: AT5G27430.1 (Signal peptidase subunit )

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-70
Identity = 123/156 (78.85%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MHSFGYRANALLTFA TILA ICAIASFSD  ++ +P+AQ+Q+L+INWFQ QP+GNDEVS
Sbjct: 1   MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TLNI+ADLQSLFTWNTKQVF F+AAEYET  N+LNQ+SLWD IIP KE AKF I  SNK
Sbjct: 61  LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLI 157
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFADK++
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIV 156

[Close]

BLAST of CmoCh05G011620 vs. TAIR 10
Match: AT3G05230.1 (Signal peptidase subunit )

HSP 1 Score: 256.5 bits (654), Expect = 3.2e-68
Identity = 120/156 (76.92%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MH+FGYRANALLTFA T LA ICAIASFSD  ++ +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETP NSLNQ+SLWD IIP+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGKMFADKLI 157
           YRF+DQG NLRGK+FNLTLHWHVMPKTGKMFADK++
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIV 156

[Close]

BLAST of CmoCh05G011620 vs. TAIR 10
Match: AT1G54850.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 219.9 bits (559), Expect = 3.3e-57
Identity = 109/196 (55.61%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 174 RKNEAESLNIRH-RILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKV-GPAMVYCP 233
           R+N +   N R+ +IL V P+NSMPYIG P+ H+ + SS R+ D  ++ KV GPAM++ P
Sbjct: 11  RENNSFPDNTRNPQILEVTPLNSMPYIG-PVTHASM-SSNRMND--SVEKVGGPAMIFLP 70

Query: 234 LTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTD 293
             +S ++ +++S +KTGV+LTG+AAMG++G  IG VDI E+E+SY+FRV+LPGV+RD+ +
Sbjct: 71  SDSSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKE 130

Query: 294 SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQF 353
            FSC++EPDG + IKG TTTGE  VCK++Q+F+M ++NLCPPGHF+I FQLPGPV+N +F
Sbjct: 131 -FSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEF 190

Query: 354 SGAFGADGILEGTVPK 368
           +G FG+DG+LEG V K
Sbjct: 191 NGNFGSDGVLEGVVKK 201

[Close]

BLAST of CmoCh05G011620 vs. TAIR 10
Match: AT3G05230.2 (Signal peptidase subunit )

HSP 1 Score: 196.1 bits (497), Expect = 5.1e-50
Identity = 94/126 (74.60%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 1   MHSFGYRANALLTFAATILAVICAIASFSDTLNSPSPTAQVQVLSINWFQSQPNGNDEVS 60
           MH+FGYRANALLTFA T LA ICAIASFSD  ++ +P+A++Q+L+IN F+ Q +GNDEVS
Sbjct: 1   MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETPANSLNQISLWDGIIPSKEIAKFQIHTSNK 120
           +TL+ISADLQSLFTWNTKQVFVF+AAEYETP NSLNQ+SLWD IIP+KE AKF+I  SNK
Sbjct: 61  LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120

Query: 121 YRFVDQ 127
           YRF+DQ
Sbjct: 121 YRFIDQ 126

[Close]

BLAST of CmoCh05G011620 vs. TAIR 10
Match: AT1G54840.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-30
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 261 GPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESIVCKNS 320
           G ++G +DIGE +++Y FRVSLPGV RD+   FSC++E +G V ++GVTTTG   V + S
Sbjct: 237 GLMVGLMDIGECDDAYLFRVSLPGVKRDER-YFSCEVEDNGKVLVRGVTTTGGKRVKRYS 296

Query: 321 QVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPK 368
            VF MQ+R+LCPPG+FS++F+LPGPV+  +FSG FG DGILEG V K
Sbjct: 297 HVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMK 342

The following BLAST results are available for this feature:

BLAST of CmoCh05G011620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q53YF3	2.8e-69	78.85	Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430...	[more]
Q9MA96	4.5e-67	76.92	Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230...	[more]
Q84K79	4.7e-56	55.61	Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8RWL4	1.7e-29	57.94	Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1	[more]
Q9LGB4	6.3e-29	45.81	Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of CmoCh05G011620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4J2	1.5e-110	100.00	alpha-crystallin domain-containing protein 22.3-like isoform X1 OS=Cucurbita mos...	[more]
A0A6J1KA02	2.2e-109	98.49	alpha-crystallin domain-containing protein 22.3-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1G4M2	5.4e-108	98.99	alpha-crystallin domain-containing protein 22.3-like isoform X2 OS=Cucurbita mos...	[more]
A0A6J1KIR4	7.9e-107	97.49	alpha-crystallin domain-containing protein 22.3-like isoform X2 OS=Cucurbita max...	[more]
A0A0A0LGB8	2.9e-101	90.95	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021590 PE=3 S...	[more]

BLAST of CmoCh05G011620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030258.1	3.2e-110	100.00	Alpha-crystallin domain-containing protein 22.3, partial [Cucurbita argyrosperma...	[more]
XP_022946766.1	3.2e-110	100.00	alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita mosch...	[more]
XP_023545831.1	7.0e-110	99.50	alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita pepo ...	[more]
XP_022999132.1	4.6e-109	98.49	alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita maxim...	[more]
XP_022946767.1	1.1e-107	98.99	alpha-crystallin domain-containing protein 22.3-like isoform X2 [Cucurbita mosch...	[more]

BLAST of CmoCh05G011620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27430.1	2.0e-70	78.85	Signal peptidase subunit	[more]
AT3G05230.1	3.2e-68	76.92	Signal peptidase subunit	[more]
AT1G54850.1	3.3e-57	55.61	HSP20-like chaperones superfamily protein	[more]
AT3G05230.2	5.1e-50	74.60	Signal peptidase subunit	[more]
AT1G54840.1	1.2e-30	57.94	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 264..368 e-value: 1.6E-10 score: 42.8
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 254..367
IPR007653	Signal peptidase complex subunit 3	PFAM	PF04573	SPC22	coord: 6..155 e-value: 8.1E-51 score: 171.9
None	No IPR available	PANTHER	PTHR34661:SF9	SUBFAMILY NOT NAMED	coord: 170..367
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 268..367 e-value: 4.86402E-9 score: 51.0157
IPR039321	Increased DNA methylation 2/3-like	PANTHER	PTHR34661	INCREASED DNA METHYLATION 3	coord: 170..367
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 255..368 score: 12.967418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G011620.1	CmoCh05G011620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034440	lipid oxidation
biological_process	GO:1901537	positive regulation of DNA demethylation
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005787	signal peptidase complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen