CmoCh05G011610 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G011610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat (PPR) superfamily protein
LocationCmo_Chr05: 9174093 .. 9175832 (+)
RNA-Seq ExpressionCmoCh05G011610
SyntenyCmoCh05G011610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTCAATCTTTGCCCATCTGCTGGAGAAACGAAGAAAATGAAGCAGAATTATTACAGTATTATAAGATTCTTGGAAAAATGCAAAACCATGAAGGAGTTGAAGCAAATACACAGCCTGATGGTTACTACTTCATTCATCAAGAACATAATCCCCTGCAGCAGACTTATTGATTTTTGCGCAAATTCCGAACTGGGTGACATCGAATACGCAAGATCAGTTTTCGATGGCATTGATCAGCGCAGTGTCTACATATGGAACTCGATGATCAAAGGCTACTGCAATGGCAGTGACAAGTTTGAAGCTCTGTTTATGTATGAAGAAATGCAGCGTAAAGGCTTCTCCCCAGACCATTTCACCTTCCCTTTTGTGTTGAAAGTGTGCTCCATAATCGATCTTCTTCGATACGGGCAAGGCGTTCACAGTCGAATTGTGAAAACTGGGTTTGAATTAGATTCGTATACTTGTTCTTGTTTGCTTAATATGTATGTTTCTTGTGGAGATTTGAGTTCTGGGCTGAAGGTATTTGAGTTTATTCCCAAATGGAATGTGGTCGCTTGGACTTCATTAATTGCAGGGTTTGTGAACAATCATCAGGCTAGAGAAGCTTTGAGATTGTTCCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGGCCACTGCCTTGGCTGCAGCTGCTCGTTGCAGGGATATCGACGCTGGAAAATTTGTTCACAATCGTCTCTGGCAACTTGGTTACGATCCATTCGAAACAAATTCTTGCTTCAATGTAATACTTGCAACTGCAATCATGGACATGTATGCAAAATGTGGCAAGTTGGAGACTGCTCGGAATCTATTTGATAAAATGCCTCAAAGGAACTTGGTTGTTTGGAATTCGATGATCGGTGCTTATAGTCAATATGGCCGAGGCGTGGAAGCGTTAGGTCTTTTTGTTGACATGGGATTGGCTGGATTTGTTCCTGATAAAGCAACATTTCTGAGTGTGATAAGTGCTTGCACCCAGCTGGGGTTTCAATCGACAGGGCGAAGTCTACATGCTCGTGTGTTAAAAACGAGCTTTGGCGAATACGTTACCATTGGAACTGCTCTTATGGACATGTATGCCAAAGCTGGAGATGCAGATACTGCGTTGAAGATCTTCAGCAAGTTGCAGAAGAAAGACGTAATGGCCTGGACGACGATGATACTAGGCTTAGCAATCAACGGCAAAGGCGAAGAAGCACTGCATATGTTCAGAAGAATGAAAGCAGAAGCTGACGTTGCTCCCGACCGGGTCACCTACATTGGAGTTCTATGGGCATGTAGCCATCTCGGGTTAGTTGAAGAAGGTCAGCAACAGTTCACCTCCATGACTGAGGTTTACAGTATCGAGCCTACCATGGAGCATTATGGCATCATGATCGATCTCTTGAGTCGAGCAGGTCAGTTCGAAGAGGCCCAGGAGTTCCTGAAGAAAATGCCAATGCAGCCTAATGCAACAATATGGAGTTCTATTCTGAATGGCTGTGAAATTTATGGAAATGTAGGCCTTGCCAACAGAGTGAAGAGTCACATAGCAGAGCTAAAGCATTCCAGCAGTGGTGTTTATGTACTTCTATCAAATATTTATGCTAGAGCCAGTAATTGGCAGGAAATGAAGCTTGCTAGAGATATGTTAAAGCATAAAAGAATAGGAAAAACTCTTGGGCACAGTTTTGTTGAAGTAAAGTTGCTACCTTCATAG

mRNA sequence

ATGATCTTCAATCTTTGCCCATCTGCTGGAGAAACGAAGAAAATGAAGCAGAATTATTACAGTATTATAAGATTCTTGGAAAAATGCAAAACCATGAAGGAGTTGAAGCAAATACACAGCCTGATGGTTACTACTTCATTCATCAAGAACATAATCCCCTGCAGCAGACTTATTGATTTTTGCGCAAATTCCGAACTGGGTGACATCGAATACGCAAGATCAGTTTTCGATGGCATTGATCAGCGCAGTGTCTACATATGGAACTCGATGATCAAAGGCTACTGCAATGGCAGTGACAAGTTTGAAGCTCTGTTTATGTATGAAGAAATGCAGCGTAAAGGCTTCTCCCCAGACCATTTCACCTTCCCTTTTGTGTTGAAAGTGTGCTCCATAATCGATCTTCTTCGATACGGGCAAGGCGTTCACAGTCGAATTGTGAAAACTGGGTTTGAATTAGATTCGTATACTTGTTCTTGTTTGCTTAATATGTATGTTTCTTGTGGAGATTTGAGTTCTGGGCTGAAGGTATTTGAGTTTATTCCCAAATGGAATGTGGTCGCTTGGACTTCATTAATTGCAGGGTTTGTGAACAATCATCAGGCTAGAGAAGCTTTGAGATTGTTCCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGGCCACTGCCTTGGCTGCAGCTGCTCGTTGCAGGGATATCGACGCTGGAAAATTTGTTCACAATCGTCTCTGGCAACTTGGTTACGATCCATTCGAAACAAATTCTTGCTTCAATGTAATACTTGCAACTGCAATCATGGACATGTATGCAAAATGTGGCAAGTTGGAGACTGCTCGGAATCTATTTGATAAAATGCCTCAAAGGAACTTGGTTGTTTGGAATTCGATGATCGGTGCTTATAGTCAATATGGCCGAGGCGTGGAAGCGTTAGGTCTTTTTGTTGACATGGGATTGGCTGGATTTGTTCCTGATAAAGCAACATTTCTGAGTGTGATAAGTGCTTGCACCCAGCTGGGGTTTCAATCGACAGGGCGAAGTCTACATGCTCGTGTGTTAAAAACGAGCTTTGGCGAATACGTTACCATTGGAACTGCTCTTATGGACATGTATGCCAAAGCTGGAGATGCAGATACTGCGTTGAAGATCTTCAGCAAGTTGCAGAAGAAAGACGTAATGGCCTGGACGACGATGATACTAGGCTTAGCAATCAACGGCAAAGGCGAAGAAGCACTGCATATGTTCAGAAGAATGAAAGCAGAAGCTGACGTTGCTCCCGACCGGGTCACCTACATTGGAGTTCTATGGGCATGTAGCCATCTCGGGTTAGTTGAAGAAGGTCAGCAACAGTTCACCTCCATGACTGAGGTTTACAGTATCGAGCCTACCATGGAGCATTATGGCATCATGATCGATCTCTTGAGTCGAGCAGGTCAGTTCGAAGAGGCCCAGGAGTTCCTGAAGAAAATGCCAATGCAGCCTAATGCAACAATATGGAGTTCTATTCTGAATGGCTGTGAAATTTATGGAAATGTAGGCCTTGCCAACAGAGTGAAGAGTCACATAGCAGAGCTAAAGCATTCCAGCAGTGGTGTTTATGTACTTCTATCAAATATTTATGCTAGAGCCAGTAATTGGCAGGAAATGAAGCTTGCTAGAGATATGTTAAAGCATAAAAGAATAGGAAAAACTCTTGGGCACAGTTTTGTTGAAGTAAAGTTGCTACCTTCATAG

Coding sequence (CDS)

ATGATCTTCAATCTTTGCCCATCTGCTGGAGAAACGAAGAAAATGAAGCAGAATTATTACAGTATTATAAGATTCTTGGAAAAATGCAAAACCATGAAGGAGTTGAAGCAAATACACAGCCTGATGGTTACTACTTCATTCATCAAGAACATAATCCCCTGCAGCAGACTTATTGATTTTTGCGCAAATTCCGAACTGGGTGACATCGAATACGCAAGATCAGTTTTCGATGGCATTGATCAGCGCAGTGTCTACATATGGAACTCGATGATCAAAGGCTACTGCAATGGCAGTGACAAGTTTGAAGCTCTGTTTATGTATGAAGAAATGCAGCGTAAAGGCTTCTCCCCAGACCATTTCACCTTCCCTTTTGTGTTGAAAGTGTGCTCCATAATCGATCTTCTTCGATACGGGCAAGGCGTTCACAGTCGAATTGTGAAAACTGGGTTTGAATTAGATTCGTATACTTGTTCTTGTTTGCTTAATATGTATGTTTCTTGTGGAGATTTGAGTTCTGGGCTGAAGGTATTTGAGTTTATTCCCAAATGGAATGTGGTCGCTTGGACTTCATTAATTGCAGGGTTTGTGAACAATCATCAGGCTAGAGAAGCTTTGAGATTGTTCCAAGATATGGAGAATGAAGGTGTGGAGCCTAATGAAATCACCATGGCCACTGCCTTGGCTGCAGCTGCTCGTTGCAGGGATATCGACGCTGGAAAATTTGTTCACAATCGTCTCTGGCAACTTGGTTACGATCCATTCGAAACAAATTCTTGCTTCAATGTAATACTTGCAACTGCAATCATGGACATGTATGCAAAATGTGGCAAGTTGGAGACTGCTCGGAATCTATTTGATAAAATGCCTCAAAGGAACTTGGTTGTTTGGAATTCGATGATCGGTGCTTATAGTCAATATGGCCGAGGCGTGGAAGCGTTAGGTCTTTTTGTTGACATGGGATTGGCTGGATTTGTTCCTGATAAAGCAACATTTCTGAGTGTGATAAGTGCTTGCACCCAGCTGGGGTTTCAATCGACAGGGCGAAGTCTACATGCTCGTGTGTTAAAAACGAGCTTTGGCGAATACGTTACCATTGGAACTGCTCTTATGGACATGTATGCCAAAGCTGGAGATGCAGATACTGCGTTGAAGATCTTCAGCAAGTTGCAGAAGAAAGACGTAATGGCCTGGACGACGATGATACTAGGCTTAGCAATCAACGGCAAAGGCGAAGAAGCACTGCATATGTTCAGAAGAATGAAAGCAGAAGCTGACGTTGCTCCCGACCGGGTCACCTACATTGGAGTTCTATGGGCATGTAGCCATCTCGGGTTAGTTGAAGAAGGTCAGCAACAGTTCACCTCCATGACTGAGGTTTACAGTATCGAGCCTACCATGGAGCATTATGGCATCATGATCGATCTCTTGAGTCGAGCAGGTCAGTTCGAAGAGGCCCAGGAGTTCCTGAAGAAAATGCCAATGCAGCCTAATGCAACAATATGGAGTTCTATTCTGAATGGCTGTGAAATTTATGGAAATGTAGGCCTTGCCAACAGAGTGAAGAGTCACATAGCAGAGCTAAAGCATTCCAGCAGTGGTGTTTATGTACTTCTATCAAATATTTATGCTAGAGCCAGTAATTGGCAGGAAATGAAGCTTGCTAGAGATATGTTAAAGCATAAAAGAATAGGAAAAACTCTTGGGCACAGTTTTGTTGAAGTAAAGTTGCTACCTTCATAG

Protein sequence

MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS
Homology
[Close]
BLAST of CmoCh05G011610 vs. ExPASy Swiss-Prot
Match: Q9MA95 (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 631.3 bits (1627), Expect = 1.1e-179
Identity = 301/561 (53.65%), Postives = 410/561 (73.08%), Query Frame = 0 

Query: 15  MKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCAN-SELGDIEYAR 74
           MK++Y  I+  LE C+++ EL Q+H LM+ +S I+N+IP SRLIDFC    E  ++ YAR
Sbjct: 2   MKKHYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYAR 61

Query: 75  SVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIID 134
           SVF+ ID  SVYIWNSMI+GY N  +  +AL  Y+EM RKG+SPD+FTFP+VLK CS + 
Sbjct: 62  SVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLR 121

Query: 135 LLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIA 194
            +++G  VH  +VKTGFE++ Y  +CLL+MY+ CG+++ GL+VFE IP+WNVVAW SLI+
Sbjct: 122 DIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLIS 181

Query: 195 GFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDP 254
           GFVNN++  +A+  F++M++ GV+ NE  M   L A  RC+DI  GK+ H  L  LG+DP
Sbjct: 182 GFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP 241

Query: 255 -FETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEA 314
            F++   FNVILAT+++DMYAKCG L TAR LFD MP+R LV WNS+I  YSQ G   EA
Sbjct: 242 YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEA 301

Query: 315 LGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDM 374
           L +F+DM   G  PDK TFLSVI A    G    G+S+HA V KT F +   I  AL++M
Sbjct: 302 LCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNM 361

Query: 375 YAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVT 434
           YAK GDA++A K F  L+KKD +AWT +I+GLA +G G EAL +F+RM+ + +  PD +T
Sbjct: 362 YAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421

Query: 435 YIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKM 494
           Y+GVL+ACSH+GLVEEGQ+ F  M +++ +EPT+EHYG M+D+LSRAG+FEEA+  +K M
Sbjct: 422 YLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM 481

Query: 495 PMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMK 554
           P++PN  IW ++LNGC+I+ N+ L +R++S +AE +   SG+YVLLSNIYA+A  W ++K
Sbjct: 482 PVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVK 541

Query: 555 LARDMLKHKRIGKTLGHSFVE 574
           L R+ +K KR+ K LGHS VE
Sbjct: 542 LIRESMKSKRVDKVLGHSSVE 562

[Close]
BLAST of CmoCh05G011610 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.0e-109
Identity = 201/580 (34.66%), Postives = 334/580 (57.59%), Query Frame = 0 

Query: 22  IIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQ 81
           ++  LEKCK +  LKQI + M+    I +    SRLI FCA SE   ++Y+  +  GI+ 
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115

Query: 82  RSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKG---FSPDHFTFPFVLKVCSIIDLLRYG 141
            +++ WN  I+G+    +  E+  +Y++M R G     PDHFT+P + KVC+ + L   G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175

Query: 142 QGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNN 201
             +   ++K   EL S+  +  ++M+ SCGD+ +  KVF+  P  ++V+W  LI G+   
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235

Query: 202 HQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGY------- 261
            +A +A+ +++ ME+EGV+P+++TM   +++ +   D++ GK  +  + + G        
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295

Query: 262 -----------DPFETNSCFN------VILATAIMDMYAKCGKLETARNLFDKMPQRNLV 321
                      D  E    F+      ++  T ++  YA+CG L+ +R LFD M ++++V
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355

Query: 322 VWNSMIGAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARV 381
           +WN+MIG   Q  RG +AL LF +M  +   PD+ T +  +SAC+QLG    G  +H  +
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415

Query: 382 LKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEAL 441
            K S    V +GT+L+DMYAK G+   AL +F  +Q ++ + +T +I GLA++G    A+
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475

Query: 442 HMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMID 501
             F  M  +A +APD +T+IG+L AC H G+++ G+  F+ M   +++ P ++HY IM+D
Sbjct: 476 SYFNEM-IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 535

Query: 502 LLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGV 561
           LL RAG  EEA   ++ MPM+ +A +W ++L GC ++GNV L  +    + EL  S SG+
Sbjct: 536 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 595

Query: 562 YVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSFVEV 575
           YVLL  +Y  A+ W++ K AR M+  + + K  G S +EV
Sbjct: 596 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634

[Close]
BLAST of CmoCh05G011610 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 7.5e-109
Identity = 212/606 (34.98%), Postives = 338/606 (55.78%), Query Frame = 0 

Query: 3   FNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCA 62
           F+  PS+ +        +  +  L  CKT++ L+ IH+ M+           S+LI+FC 
Sbjct: 17  FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76

Query: 63  NS-ELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFT 122
            S     + YA SVF  I + ++ IWN+M +G+   SD   AL +Y  M   G  P+ +T
Sbjct: 77  LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136

Query: 123 FPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYV---------------- 182
           FPFVLK C+     + GQ +H  ++K G +LD Y  + L++MYV                
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196

Query: 183 ---------------SCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNNHQAREALRLFQD 242
                          S G + +  K+F+ IP  +VV+W ++I+G+      +EAL LF+D
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256

Query: 243 MENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPFETNSCFNVILATAIMD 302
           M    V P+E TM T ++A A+   I+ G+ VH  LW    D     S  N+ +  A++D
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVH--LW---IDDHGFGS--NLKIVNALID 316

Query: 303 MYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALGLFVDMGLAGFVPDKAT 362
           +Y+KCG+LETA  LF+++P ++++ WN++IG Y+      EAL LF +M  +G  P+  T
Sbjct: 317 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 376

Query: 363 FLSVISACTQLGFQSTGRSLHARVLKTSFG--EYVTIGTALMDMYAKAGDADTALKIFSK 422
            LS++ AC  LG    GR +H  + K   G     ++ T+L+DMYAK GD + A ++F+ 
Sbjct: 377 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 436

Query: 423 LQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEE 482
           +  K + +W  MI G A++G+ + +  +F RM+ +  + PD +T++G+L ACSH G+++ 
Sbjct: 437 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITFVGLLSACSHSGMLDL 496

Query: 483 GQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGC 542
           G+  F +MT+ Y + P +EHYG MIDLL  +G F+EA+E +  M M+P+  IW S+L  C
Sbjct: 497 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 556

Query: 543 EIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLG 575
           +++GNV L      ++ +++  + G YVLLSNIYA A  W E+   R +L  K + K  G
Sbjct: 557 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 614

[Close]
BLAST of CmoCh05G011610 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.1e-104
Identity = 203/601 (33.78%), Postives = 334/601 (55.57%), Query Frame = 0 

Query: 7   PSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSEL 66
           P+   T   +  + S+I   E+C ++++LKQ H  M+ T    +    S+L    A S  
Sbjct: 21  PNQPTTNNERSRHISLI---ERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSF 80

Query: 67  GDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEM-QRKGFSPDHFTFPFV 126
             +EYAR VFD I + + + WN++I+ Y +G D   +++ + +M       P+ +TFPF+
Sbjct: 81  ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 140

Query: 127 LKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNV 186
           +K  + +  L  GQ +H   VK+    D +  + L++ Y SCGDL S  KVF  I + +V
Sbjct: 141 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 200

Query: 187 VAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNR 246
           V+W S+I GFV      +AL LF+ ME+E V+ + +TM   L+A A+ R+++ G+ V + 
Sbjct: 201 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 260

Query: 247 LWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFD------------------- 306
           +        E     N+ LA A++DMY KCG +E A+ LFD                   
Sbjct: 261 I-------EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 320

Query: 307 ------------KMPQRNLVVWNSMIGAYSQYGRGVEALGLFVDMGL-AGFVPDKATFLS 366
                        MPQ+++V WN++I AY Q G+  EAL +F ++ L      ++ T +S
Sbjct: 321 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 380

Query: 367 VISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQKKD 426
            +SAC Q+G    GR +H+ + K        + +AL+ MY+K GD + + ++F+ ++K+D
Sbjct: 381 TLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 440

Query: 427 VMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQQF 486
           V  W+ MI GLA++G G EA+ MF +M+ EA+V P+ VT+  V  ACSH GLV+E +  F
Sbjct: 441 VFVWSAMIGGLAMHGCGNEAVDMFYKMQ-EANVKPNGVTFTNVFCACSHTGLVDEAESLF 500

Query: 487 TSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIYGN 546
             M   Y I P  +HY  ++D+L R+G  E+A +F++ MP+ P+ ++W ++L  C+I+ N
Sbjct: 501 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 560

Query: 547 VGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSFVE 575
           + LA    + + EL+  + G +VLLSNIYA+   W+ +   R  ++   + K  G S +E
Sbjct: 561 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 610

[Close]
BLAST of CmoCh05G011610 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.0e-102
Identity = 191/544 (35.11%), Postives = 316/544 (58.09%), Query Frame = 0 

Query: 34  ELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQRSVYIWNSMIKG 93
           +LKQIH+ ++      +    ++LI   A+S  GDI +AR VFD + +  ++ WN++I+G
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 95

Query: 94  YCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELD 153
           Y   +   +AL MY  MQ    SPD FTFP +LK CS +  L+ G+ VH+++ + GF+ D
Sbjct: 96  YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 155

Query: 154 SYTCSCLLNMYVSCGDLSSGLKVFEF--IPKWNVVAWTSLIAGFVNNHQAREALRLFQDM 213
            +  + L+ +Y  C  L S   VFE   +P+  +V+WT++++ +  N +  EAL +F  M
Sbjct: 156 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 215

Query: 214 ENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPFETNSCFNVILATAIMDM 273
               V+P+ + + + L A    +D+  G+ +H  + ++G +           L  ++  M
Sbjct: 216 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE-------IEPDLLISLNTM 275

Query: 274 YAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALGLFVDMGLAGFVPDKATF 333
           YAKCG++ TA+ LFDKM   NL++WN+MI  Y++ G   EA+ +F +M      PD  + 
Sbjct: 276 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 335

Query: 334 LSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQK 393
            S ISAC Q+G     RS++  V ++ + + V I +AL+DM+AK G  + A  +F +   
Sbjct: 336 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 395

Query: 394 KDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQ 453
           +DV+ W+ MI+G  ++G+  EA+ ++R M+    V P+ VT++G+L AC+H G+V EG  
Sbjct: 396 RDVVVWSAMIVGYGLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWW 455

Query: 454 QFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIY 513
            F  M + + I P  +HY  +IDLL RAG  ++A E +K MP+QP  T+W ++L+ C+ +
Sbjct: 456 FFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 515

Query: 514 GNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSF 573
            +V L       +  +  S++G YV LSN+YA A  W  +   R  +K K + K +G S+
Sbjct: 516 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 568

Query: 574 VEVK 576
           VEV+
Sbjct: 576 VEVR 568

[Close]
BLAST of CmoCh05G011610 vs. ExPASy TrEMBL
Match: A0A6J1G4L8 (putative pentatricopeptide repeat-containing protein At3g05240 OS=Cucurbita moschata OX=3662 GN=LOC111450735 PE=4 SV=1)

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0 

Query: 1   MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF 60
           MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF
Sbjct: 1   MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF 60

Query: 61  CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF 120
           CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF
Sbjct: 61  CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF 120

Query: 121 TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI 180
           TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI
Sbjct: 121 TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI 180

Query: 181 PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK 240
           PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK
Sbjct: 181 PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK 240

Query: 241 FVHNRLWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI 300
           FVHNRLWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI
Sbjct: 241 FVHNRLWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI 300

Query: 301 GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG 360
           GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG
Sbjct: 301 GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG 360

Query: 361 EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM 420
           EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM
Sbjct: 361 EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM 420

Query: 421 KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG 480
           KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG
Sbjct: 421 KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG 480

Query: 481 QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN 540
           QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN
Sbjct: 481 QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN 540

Query: 541 IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS 580
           IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS
Sbjct: 541 IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS 579

[Close]
BLAST of CmoCh05G011610 vs. ExPASy TrEMBL
Match: A0A6J1KG56 (putative pentatricopeptide repeat-containing protein At3g05240 OS=Cucurbita maxima OX=3661 GN=LOC111493593 PE=4 SV=1)

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 540/565 (95.58%), Postives = 549/565 (97.17%), Query Frame = 0 

Query: 15  MKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 74
           MKQNYYSII FLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS
Sbjct: 1   MKQNYYSIISFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 60

Query: 75  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 134
           VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL
Sbjct: 61  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 120

Query: 135 LRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAG 194
           LRYGQG+HSRI++TGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPK NVVAWTSLIAG
Sbjct: 121 LRYGQGIHSRILRTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKRNVVAWTSLIAG 180

Query: 195 FVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPF 254
           FVNN QA EALRLFQDMENEGVEPNEITMATALAAAARCRDI AGK VH+RL QLGY+PF
Sbjct: 181 FVNNDQASEALRLFQDMENEGVEPNEITMATALAAAARCRDIVAGKLVHDRLCQLGYNPF 240

Query: 255 ETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALG 314
           +TNSCFNVILATAIMDMYAKCGKL TARNLFDKMP+RNLVVWNSMIGAYSQYGRGVEAL 
Sbjct: 241 DTNSCFNVILATAIMDMYAKCGKLVTARNLFDKMPRRNLVVWNSMIGAYSQYGRGVEALR 300

Query: 315 LFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYA 374
           LFVDMGLAGFVPDKATFLSVISA TQLGFQSTGRSLHARVLKTSFGEYV IGTALMDMYA
Sbjct: 301 LFVDMGLAGFVPDKATFLSVISAGTQLGFQSTGRSLHARVLKTSFGEYVAIGTALMDMYA 360

Query: 375 KAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 434
           KAGDA TALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI
Sbjct: 361 KAGDAGTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 420

Query: 435 GVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPM 494
           GVLWACSHLGLVEEGQQQFTSMTEVY IEPT+EHYGIMIDLLSRAG FEEAQEFLKKMPM
Sbjct: 421 GVLWACSHLGLVEEGQQQFTSMTEVYGIEPTIEHYGIMIDLLSRAGHFEEAQEFLKKMPM 480

Query: 495 QPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLA 554
           QPNATIWSSILNGCE+YGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQ MKLA
Sbjct: 481 QPNATIWSSILNGCEMYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQGMKLA 540

Query: 555 RDMLKHKRIGKTLGHSFVEVKLLPS 580
           R MLKHKRIGKTLGHSFVEVKLLPS
Sbjct: 541 RGMLKHKRIGKTLGHSFVEVKLLPS 565

[Close]
BLAST of CmoCh05G011610 vs. ExPASy TrEMBL
Match: A0A6J1DAC7 (putative pentatricopeptide repeat-containing protein At3g05240 OS=Momordica charantia OX=3673 GN=LOC111018843 PE=4 SV=1)

HSP 1 Score: 988.8 bits (2555), Expect = 9.6e-285
Identity = 477/565 (84.42%), Postives = 518/565 (91.68%), Query Frame = 0 

Query: 15  MKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 74
           MKQ Y +II FLEKC TMKELKQ+H LM+ TS IK IIPCSR+IDFCA+SELGDI+YARS
Sbjct: 1   MKQKYRTIISFLEKCGTMKELKQVHGLMIVTSIIKKIIPCSRIIDFCADSELGDIDYARS 60

Query: 75  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 134
           VFD IDQ SVYIWNSMIKGYCNG DKFEALFMYEEMQRKGFSPDHFTFPFVLKVC++I L
Sbjct: 61  VFDRIDQPSVYIWNSMIKGYCNGGDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCTVIGL 120

Query: 135 LRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAG 194
             YGQ VH+RI+KTGFELD+YT SCLLNMYVSCGDLSSGLKVFE IPKWNVVAWTSLI+G
Sbjct: 121 FEYGQSVHNRILKTGFELDAYTSSCLLNMYVSCGDLSSGLKVFEIIPKWNVVAWTSLISG 180

Query: 195 FVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPF 254
           FVNN++AREAL+LF+DMENEGVEPNEITMAT LAA+A CRDI+ GK VHNRL +LG DPF
Sbjct: 181 FVNNNRAREALKLFEDMENEGVEPNEITMATVLAASAHCRDINTGKSVHNRLCKLGCDPF 240

Query: 255 ETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALG 314
           ++ S FNVILATAI+DMYAKCGKL TARNLFDKMPQRNLV WNSMI  YSQYGRG EAL 
Sbjct: 241 DSTSSFNVILATAIIDMYAKCGKLVTARNLFDKMPQRNLVAWNSMISGYSQYGRGAEALS 300

Query: 315 LFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYA 374
           LF+DMG+A FVPDKATF SVI ACT LGF+STGRSLHAR+LKT FGE V IGTALMDMYA
Sbjct: 301 LFIDMGVARFVPDKATFFSVIGACTHLGFRSTGRSLHARMLKTRFGEDVAIGTALMDMYA 360

Query: 375 KAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 434
           KAGDADTALKIFSKLQKKDVMAWTTMILGLAI+GKGEEALHMFRRM+AEA VAPDR+TYI
Sbjct: 361 KAGDADTALKIFSKLQKKDVMAWTTMILGLAIHGKGEEALHMFRRMEAEAAVAPDRITYI 420

Query: 435 GVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPM 494
           GVLWACSHLGLVEEGQ+QFTSMTE + IEPTMEHYG MIDLLSRAG FEEA+EFL+K+PM
Sbjct: 421 GVLWACSHLGLVEEGQKQFTSMTEAHRIEPTMEHYGCMIDLLSRAGHFEEAEEFLRKIPM 480

Query: 495 QPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLA 554
           QPNATIWSS+LNGCE+YGNVGLANRVKSHIAELK+S SGVYVLLSNIYARA  WQE+KLA
Sbjct: 481 QPNATIWSSVLNGCEMYGNVGLANRVKSHIAELKNSGSGVYVLLSNIYARACKWQEVKLA 540

Query: 555 RDMLKHKRIGKTLGHSFVEVKLLPS 580
           R+MLKH+RIGKTLGHSFVE+KLL S
Sbjct: 541 REMLKHRRIGKTLGHSFVEIKLLTS 565

[Close]
BLAST of CmoCh05G011610 vs. ExPASy TrEMBL
Match: A0A0A0LIL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021600 PE=4 SV=1)

HSP 1 Score: 987.6 bits (2552), Expect = 2.1e-284
Identity = 480/561 (85.56%), Postives = 519/561 (92.51%), Query Frame = 0 

Query: 15  MKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 74
           M QNYY+++ FLEKCKTMKELKQIHSLM+TTS +KNIIPCSRLIDFCANSELGDIEYAR+
Sbjct: 1   MNQNYYTVMSFLEKCKTMKELKQIHSLMITTSVVKNIIPCSRLIDFCANSELGDIEYART 60

Query: 75  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 134
           VFD I+QR+VYIWNSMIKGYCNG DKF ALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL
Sbjct: 61  VFDQINQRTVYIWNSMIKGYCNGGDKFGALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 120

Query: 135 LRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAG 194
           L YGQ VH+RIVKTGFELD YT SCLLNMYVSCGDL+SGLKVFEFIPKWNVVAWTSLIAG
Sbjct: 121 LVYGQSVHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAG 180

Query: 195 FVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPF 254
           FVNN Q +EALRLF+DMENEGVEPNEITM TALAAAARCRDI  GK VH+RL QLG+DPF
Sbjct: 181 FVNNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQLGFDPF 240

Query: 255 ETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALG 314
           +TNSCFNVILATAIMDMYAKCGKL TARNLFDKMPQRNLVVWNSMI AYSQYGRG EAL 
Sbjct: 241 DTNSCFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALR 300

Query: 315 LFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYA 374
           LFVDM +AGFVP+KATFLSVISACT +GF+STGRSLHAR L+ SF E+V IGTALMDMYA
Sbjct: 301 LFVDMEMAGFVPNKATFLSVISACTHMGFRSTGRSLHARALRASFHEFVAIGTALMDMYA 360

Query: 375 KAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 434
           KAGDADTALKIFSKL+KKDVMAWTTMI GLAI GKG+EAL++FRRM+ EA+VAPD++TYI
Sbjct: 361 KAGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQITYI 420

Query: 435 GVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPM 494
            VLWACSHLGLVEEGQ+QFTSMTEVY IEPTMEHYG MIDLLSRAG  +EA+E L KMP 
Sbjct: 421 AVLWACSHLGLVEEGQKQFTSMTEVYGIEPTMEHYGCMIDLLSRAGHSKEAEELLMKMPT 480

Query: 495 QPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLA 554
           QPNATI SSILNGCE+YGNVGLANRVKSHI EL++SSSGVYVLLSNI+A+A NWQEMKLA
Sbjct: 481 QPNATILSSILNGCEMYGNVGLANRVKSHIVELENSSSGVYVLLSNIHAKACNWQEMKLA 540

Query: 555 RDMLKHKRIGKTLGHSFVEVK 576
           RDMLKHK IGKTLG+SFVE+K
Sbjct: 541 RDMLKHKNIGKTLGNSFVEIK 561

[Close]
BLAST of CmoCh05G011610 vs. ExPASy TrEMBL
Match: A0A5A7TWI8 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00130 PE=4 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 8.2e-276
Identity = 471/564 (83.51%), Postives = 509/564 (90.25%), Query Frame = 0 

Query: 15  MKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 74
           M Q+YY+I+ FLEKCKTMKELKQIHSLM+ TS +KNIIPCSRLIDFCANSELGDIEYAR+
Sbjct: 1   MNQSYYTILSFLEKCKTMKELKQIHSLMIKTSVVKNIIPCSRLIDFCANSELGDIEYART 60

Query: 75  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 134
           VFD  DQ +VY+WNSMIKGYCNG DKF ALFMYEEMQRKGF PDHFTFPFVLKVCS IDL
Sbjct: 61  VFDQTDQLTVYVWNSMIKGYCNGGDKFGALFMYEEMQRKGFYPDHFTFPFVLKVCSAIDL 120

Query: 135 LRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAG 194
           L YGQ VH+RIVKTGFELD YT SCLLNMYVSCGDL+SGLKVFEFIPKWNVVAWTSLIAG
Sbjct: 121 LVYGQSVHNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAG 180

Query: 195 FVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPF 254
           FVNN Q +EALRLF+DMENEGVEPNEITM TALAAAARCRDI  GK V  RL QLG DPF
Sbjct: 181 FVNNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRLRQLGLDPF 240

Query: 255 ETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALG 314
            TNS FNVILATAIMDMYAKCGKL TARNLFDKMPQRNLVVWNSMI A+SQYGRG EAL 
Sbjct: 241 HTNSRFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQYGRGAEALR 300

Query: 315 LFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYA 374
           LFVDM LAGFVP+KATFLSVI ACT L F+STG+SLHARVLK +F E+V IGTALMDMYA
Sbjct: 301 LFVDMELAGFVPNKATFLSVIRACTHLRFRSTGQSLHARVLKANFHEFVAIGTALMDMYA 360

Query: 375 KAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 434
           K+GDADTALKIFSKL+KKDVMAWTTMI GLAI GKG+EAL++FRRM+ EA+VAPD++TYI
Sbjct: 361 KSGDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQITYI 420

Query: 435 GVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPM 494
            VLWACSHLGLVEEGQ+ FTSM EVY IEPTMEHYG MIDLLSRAG  EEA+E L KMP 
Sbjct: 421 AVLWACSHLGLVEEGQKHFTSMMEVYGIEPTMEHYGCMIDLLSRAGHSEEAEELLVKMPT 480

Query: 495 QPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLA 554
           QPNATI SSILNGCE+YGNVGLANRVKSHI ELK+SSSGVYVLLSNI+A+A NW+EMKLA
Sbjct: 481 QPNATILSSILNGCEMYGNVGLANRVKSHIVELKNSSSGVYVLLSNIHAKACNWEEMKLA 540

Query: 555 RDMLKHKRIGKTLGHSFVEVKLLP 579
           RD+LKHK+IGKTLG+SFVE+ LLP
Sbjct: 541 RDILKHKKIGKTLGNSFVEMNLLP 564

[Close]
BLAST of CmoCh05G011610 vs. NCBI nr
Match: XP_022946762.1 (putative pentatricopeptide repeat-containing protein At3g05240 [Cucurbita moschata])

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0 

Query: 1   MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF 60
           MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF
Sbjct: 1   MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF 60

Query: 61  CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF 120
           CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF
Sbjct: 61  CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF 120

Query: 121 TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI 180
           TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI
Sbjct: 121 TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI 180

Query: 181 PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK 240
           PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK
Sbjct: 181 PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK 240

Query: 241 FVHNRLWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI 300
           FVHNRLWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI
Sbjct: 241 FVHNRLWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI 300

Query: 301 GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG 360
           GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG
Sbjct: 301 GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG 360

Query: 361 EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM 420
           EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM
Sbjct: 361 EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM 420

Query: 421 KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG 480
           KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG
Sbjct: 421 KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG 480

Query: 481 QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN 540
           QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN
Sbjct: 481 QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN 540

Query: 541 IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS 580
           IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS
Sbjct: 541 IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS 579

[Close]
BLAST of CmoCh05G011610 vs. NCBI nr
Match: KAG6599257.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1175.6 bits (3040), Expect = 0.0e+00
Identity = 578/579 (99.83%), Postives = 578/579 (99.83%), Query Frame = 0 

Query: 1   MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF 60
           MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF
Sbjct: 1   MIFNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDF 60

Query: 61  CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF 120
           CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF
Sbjct: 61  CANSELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHF 120

Query: 121 TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI 180
           TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI
Sbjct: 121 TFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFI 180

Query: 181 PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK 240
           PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK
Sbjct: 181 PKWNVVAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGK 240

Query: 241 FVHNRLWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI 300
           FVHNRL QLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI
Sbjct: 241 FVHNRLCQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMI 300

Query: 301 GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG 360
           GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG
Sbjct: 301 GAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFG 360

Query: 361 EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM 420
           EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM
Sbjct: 361 EYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRM 420

Query: 421 KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG 480
           KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG
Sbjct: 421 KAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAG 480

Query: 481 QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN 540
           QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN
Sbjct: 481 QFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSN 540

Query: 541 IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS 580
           IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS
Sbjct: 541 IYARASNWQEMKLARDMLKHKRIGKTLGHSFVEVKLLPS 579

[Close]
BLAST of CmoCh05G011610 vs. NCBI nr
Match: XP_023545826.1 (putative pentatricopeptide repeat-containing protein At3g05240 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 548/565 (96.99%), Postives = 551/565 (97.52%), Query Frame = 0 

Query: 15  MKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 74
           MKQ+YYSII FLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS
Sbjct: 1   MKQSYYSIISFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 60

Query: 75  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 134
           VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSII+L
Sbjct: 61  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIINL 120

Query: 135 LRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAG 194
           LRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAG
Sbjct: 121 LRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAG 180

Query: 195 FVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPF 254
           FVNN QA EALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHN L QLGYDPF
Sbjct: 181 FVNNDQASEALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNHLCQLGYDPF 240

Query: 255 ETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALG 314
           ETNSCFNVILATAIMDMYAKCGKL TARNLFDKMPQRNLVVWNSMI AYSQYGRGVEALG
Sbjct: 241 ETNSCFNVILATAIMDMYAKCGKLGTARNLFDKMPQRNLVVWNSMISAYSQYGRGVEALG 300

Query: 315 LFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYA 374
           LF DMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGE V I TALMDMYA
Sbjct: 301 LFNDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGESVAIVTALMDMYA 360

Query: 375 KAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 434
           KAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI
Sbjct: 361 KAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 420

Query: 435 GVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPM 494
           GVLWACSHLGLVEEGQQQF SMTEVY IEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPM
Sbjct: 421 GVLWACSHLGLVEEGQQQFVSMTEVYGIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPM 480

Query: 495 QPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLA 554
           QPNATIWSSILNGCE+YGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLA
Sbjct: 481 QPNATIWSSILNGCEMYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLA 540

Query: 555 RDMLKHKRIGKTLGHSFVEVKLLPS 580
           RDMLKHKRIGKTLGHS VEVKLLPS
Sbjct: 541 RDMLKHKRIGKTLGHSLVEVKLLPS 565

[Close]
BLAST of CmoCh05G011610 vs. NCBI nr
Match: KAG7030257.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 545/548 (99.45%), Postives = 546/548 (99.64%), Query Frame = 0 

Query: 32  MKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQRSVYIWNSMI 91
           MKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQRSVYIWNSMI
Sbjct: 1   MKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQRSVYIWNSMI 60

Query: 92  KGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLRYGQGVHSRIVKTGFE 151
           KGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLRYGQGVHSRIVKTGFE
Sbjct: 61  KGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLRYGQGVHSRIVKTGFE 120

Query: 152 LDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNNHQAREALRLFQDM 211
           LDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNNHQAREALRLFQDM
Sbjct: 121 LDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNNHQAREALRLFQDM 180

Query: 212 ENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPFETNSCFNVILATAIMDM 271
           ENEGVEPNEITMATALAAAARCRDIDAGKFVHNRL QLGYDPFETNSCFNVILATAIMDM
Sbjct: 181 ENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLCQLGYDPFETNSCFNVILATAIMDM 240

Query: 272 YAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALGLFVDMGLAGFVPDKATF 331
           YAKCGKLETARNLFDK+PQRNLVVWNSMI AYSQYGRGVEALGLFVDMGLAGFVPDKATF
Sbjct: 241 YAKCGKLETARNLFDKIPQRNLVVWNSMISAYSQYGRGVEALGLFVDMGLAGFVPDKATF 300

Query: 332 LSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQK 391
           LSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQK
Sbjct: 301 LSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQK 360

Query: 392 KDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQ 451
           KDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQ
Sbjct: 361 KDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQ 420

Query: 452 QFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIY 511
           QFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIY
Sbjct: 421 QFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIY 480

Query: 512 GNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSF 571
           GNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSF
Sbjct: 481 GNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSF 540

Query: 572 VEVKLLPS 580
           VEVKLLPS
Sbjct: 541 VEVKLLPS 548

[Close]
BLAST of CmoCh05G011610 vs. NCBI nr
Match: XP_022999114.1 (putative pentatricopeptide repeat-containing protein At3g05240 [Cucurbita maxima])

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 540/565 (95.58%), Postives = 549/565 (97.17%), Query Frame = 0 

Query: 15  MKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 74
           MKQNYYSII FLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS
Sbjct: 1   MKQNYYSIISFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARS 60

Query: 75  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 134
           VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL
Sbjct: 61  VFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDL 120

Query: 135 LRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAG 194
           LRYGQG+HSRI++TGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPK NVVAWTSLIAG
Sbjct: 121 LRYGQGIHSRILRTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKRNVVAWTSLIAG 180

Query: 195 FVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPF 254
           FVNN QA EALRLFQDMENEGVEPNEITMATALAAAARCRDI AGK VH+RL QLGY+PF
Sbjct: 181 FVNNDQASEALRLFQDMENEGVEPNEITMATALAAAARCRDIVAGKLVHDRLCQLGYNPF 240

Query: 255 ETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALG 314
           +TNSCFNVILATAIMDMYAKCGKL TARNLFDKMP+RNLVVWNSMIGAYSQYGRGVEAL 
Sbjct: 241 DTNSCFNVILATAIMDMYAKCGKLVTARNLFDKMPRRNLVVWNSMIGAYSQYGRGVEALR 300

Query: 315 LFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYA 374
           LFVDMGLAGFVPDKATFLSVISA TQLGFQSTGRSLHARVLKTSFGEYV IGTALMDMYA
Sbjct: 301 LFVDMGLAGFVPDKATFLSVISAGTQLGFQSTGRSLHARVLKTSFGEYVAIGTALMDMYA 360

Query: 375 KAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 434
           KAGDA TALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI
Sbjct: 361 KAGDAGTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYI 420

Query: 435 GVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPM 494
           GVLWACSHLGLVEEGQQQFTSMTEVY IEPT+EHYGIMIDLLSRAG FEEAQEFLKKMPM
Sbjct: 421 GVLWACSHLGLVEEGQQQFTSMTEVYGIEPTIEHYGIMIDLLSRAGHFEEAQEFLKKMPM 480

Query: 495 QPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLA 554
           QPNATIWSSILNGCE+YGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQ MKLA
Sbjct: 481 QPNATIWSSILNGCEMYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQGMKLA 540

Query: 555 RDMLKHKRIGKTLGHSFVEVKLLPS 580
           R MLKHKRIGKTLGHSFVEVKLLPS
Sbjct: 541 RGMLKHKRIGKTLGHSFVEVKLLPS 565

[Close]
BLAST of CmoCh05G011610 vs. TAIR 10
Match: AT3G05240.1 (mitochondrial editing factor 19 )

HSP 1 Score: 631.3 bits (1627), Expect = 7.5e-181
Identity = 301/561 (53.65%), Postives = 410/561 (73.08%), Query Frame = 0 

Query: 15  MKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCAN-SELGDIEYAR 74
           MK++Y  I+  LE C+++ EL Q+H LM+ +S I+N+IP SRLIDFC    E  ++ YAR
Sbjct: 2   MKKHYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYAR 61

Query: 75  SVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIID 134
           SVF+ ID  SVYIWNSMI+GY N  +  +AL  Y+EM RKG+SPD+FTFP+VLK CS + 
Sbjct: 62  SVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLR 121

Query: 135 LLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIA 194
            +++G  VH  +VKTGFE++ Y  +CLL+MY+ CG+++ GL+VFE IP+WNVVAW SLI+
Sbjct: 122 DIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLIS 181

Query: 195 GFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDP 254
           GFVNN++  +A+  F++M++ GV+ NE  M   L A  RC+DI  GK+ H  L  LG+DP
Sbjct: 182 GFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP 241

Query: 255 -FETNSCFNVILATAIMDMYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEA 314
            F++   FNVILAT+++DMYAKCG L TAR LFD MP+R LV WNS+I  YSQ G   EA
Sbjct: 242 YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEA 301

Query: 315 LGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDM 374
           L +F+DM   G  PDK TFLSVI A    G    G+S+HA V KT F +   I  AL++M
Sbjct: 302 LCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNM 361

Query: 375 YAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVT 434
           YAK GDA++A K F  L+KKD +AWT +I+GLA +G G EAL +F+RM+ + +  PD +T
Sbjct: 362 YAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421

Query: 435 YIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKM 494
           Y+GVL+ACSH+GLVEEGQ+ F  M +++ +EPT+EHYG M+D+LSRAG+FEEA+  +K M
Sbjct: 422 YLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM 481

Query: 495 PMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMK 554
           P++PN  IW ++LNGC+I+ N+ L +R++S +AE +   SG+YVLLSNIYA+A  W ++K
Sbjct: 482 PVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVK 541

Query: 555 LARDMLKHKRIGKTLGHSFVE 574
           L R+ +K KR+ K LGHS VE
Sbjct: 542 LIRESMKSKRVDKVLGHSSVE 562

[Close]
BLAST of CmoCh05G011610 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 397.9 bits (1021), Expect = 1.4e-110
Identity = 201/580 (34.66%), Postives = 334/580 (57.59%), Query Frame = 0 

Query: 22  IIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQ 81
           ++  LEKCK +  LKQI + M+    I +    SRLI FCA SE   ++Y+  +  GI+ 
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115

Query: 82  RSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKG---FSPDHFTFPFVLKVCSIIDLLRYG 141
            +++ WN  I+G+    +  E+  +Y++M R G     PDHFT+P + KVC+ + L   G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175

Query: 142 QGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNN 201
             +   ++K   EL S+  +  ++M+ SCGD+ +  KVF+  P  ++V+W  LI G+   
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235

Query: 202 HQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGY------- 261
            +A +A+ +++ ME+EGV+P+++TM   +++ +   D++ GK  +  + + G        
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295

Query: 262 -----------DPFETNSCFN------VILATAIMDMYAKCGKLETARNLFDKMPQRNLV 321
                      D  E    F+      ++  T ++  YA+CG L+ +R LFD M ++++V
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355

Query: 322 VWNSMIGAYSQYGRGVEALGLFVDMGLAGFVPDKATFLSVISACTQLGFQSTGRSLHARV 381
           +WN+MIG   Q  RG +AL LF +M  +   PD+ T +  +SAC+QLG    G  +H  +
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415

Query: 382 LKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQKKDVMAWTTMILGLAINGKGEEAL 441
            K S    V +GT+L+DMYAK G+   AL +F  +Q ++ + +T +I GLA++G    A+
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475

Query: 442 HMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQQFTSMTEVYSIEPTMEHYGIMID 501
             F  M  +A +APD +T+IG+L AC H G+++ G+  F+ M   +++ P ++HY IM+D
Sbjct: 476 SYFNEM-IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 535

Query: 502 LLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIYGNVGLANRVKSHIAELKHSSSGV 561
           LL RAG  EEA   ++ MPM+ +A +W ++L GC ++GNV L  +    + EL  S SG+
Sbjct: 536 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 595

Query: 562 YVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSFVEV 575
           YVLL  +Y  A+ W++ K AR M+  + + K  G S +EV
Sbjct: 596 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634

[Close]
BLAST of CmoCh05G011610 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 396.0 bits (1016), Expect = 5.3e-110
Identity = 212/606 (34.98%), Postives = 338/606 (55.78%), Query Frame = 0 

Query: 3   FNLCPSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCA 62
           F+  PS+ +        +  +  L  CKT++ L+ IH+ M+           S+LI+FC 
Sbjct: 17  FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76

Query: 63  NS-ELGDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEMQRKGFSPDHFT 122
            S     + YA SVF  I + ++ IWN+M +G+   SD   AL +Y  M   G  P+ +T
Sbjct: 77  LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136

Query: 123 FPFVLKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYV---------------- 182
           FPFVLK C+     + GQ +H  ++K G +LD Y  + L++MYV                
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196

Query: 183 ---------------SCGDLSSGLKVFEFIPKWNVVAWTSLIAGFVNNHQAREALRLFQD 242
                          S G + +  K+F+ IP  +VV+W ++I+G+      +EAL LF+D
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256

Query: 243 MENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPFETNSCFNVILATAIMD 302
           M    V P+E TM T ++A A+   I+ G+ VH  LW    D     S  N+ +  A++D
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVH--LW---IDDHGFGS--NLKIVNALID 316

Query: 303 MYAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALGLFVDMGLAGFVPDKAT 362
           +Y+KCG+LETA  LF+++P ++++ WN++IG Y+      EAL LF +M  +G  P+  T
Sbjct: 317 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 376

Query: 363 FLSVISACTQLGFQSTGRSLHARVLKTSFG--EYVTIGTALMDMYAKAGDADTALKIFSK 422
            LS++ AC  LG    GR +H  + K   G     ++ T+L+DMYAK GD + A ++F+ 
Sbjct: 377 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 436

Query: 423 LQKKDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEE 482
           +  K + +W  MI G A++G+ + +  +F RM+ +  + PD +T++G+L ACSH G+++ 
Sbjct: 437 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITFVGLLSACSHSGMLDL 496

Query: 483 GQQQFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGC 542
           G+  F +MT+ Y + P +EHYG MIDLL  +G F+EA+E +  M M+P+  IW S+L  C
Sbjct: 497 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 556

Query: 543 EIYGNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLG 575
           +++GNV L      ++ +++  + G YVLLSNIYA A  W E+   R +L  K + K  G
Sbjct: 557 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 614

[Close]
BLAST of CmoCh05G011610 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 382.1 bits (980), Expect = 7.9e-106
Identity = 203/601 (33.78%), Postives = 334/601 (55.57%), Query Frame = 0 

Query: 7   PSAGETKKMKQNYYSIIRFLEKCKTMKELKQIHSLMVTTSFIKNIIPCSRLIDFCANSEL 66
           P+   T   +  + S+I   E+C ++++LKQ H  M+ T    +    S+L    A S  
Sbjct: 21  PNQPTTNNERSRHISLI---ERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSF 80

Query: 67  GDIEYARSVFDGIDQRSVYIWNSMIKGYCNGSDKFEALFMYEEM-QRKGFSPDHFTFPFV 126
             +EYAR VFD I + + + WN++I+ Y +G D   +++ + +M       P+ +TFPF+
Sbjct: 81  ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 140

Query: 127 LKVCSIIDLLRYGQGVHSRIVKTGFELDSYTCSCLLNMYVSCGDLSSGLKVFEFIPKWNV 186
           +K  + +  L  GQ +H   VK+    D +  + L++ Y SCGDL S  KVF  I + +V
Sbjct: 141 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 200

Query: 187 VAWTSLIAGFVNNHQAREALRLFQDMENEGVEPNEITMATALAAAARCRDIDAGKFVHNR 246
           V+W S+I GFV      +AL LF+ ME+E V+ + +TM   L+A A+ R+++ G+ V + 
Sbjct: 201 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 260

Query: 247 LWQLGYDPFETNSCFNVILATAIMDMYAKCGKLETARNLFD------------------- 306
           +        E     N+ LA A++DMY KCG +E A+ LFD                   
Sbjct: 261 I-------EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 320

Query: 307 ------------KMPQRNLVVWNSMIGAYSQYGRGVEALGLFVDMGL-AGFVPDKATFLS 366
                        MPQ+++V WN++I AY Q G+  EAL +F ++ L      ++ T +S
Sbjct: 321 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 380

Query: 367 VISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQKKD 426
            +SAC Q+G    GR +H+ + K        + +AL+ MY+K GD + + ++F+ ++K+D
Sbjct: 381 TLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 440

Query: 427 VMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQQF 486
           V  W+ MI GLA++G G EA+ MF +M+ EA+V P+ VT+  V  ACSH GLV+E +  F
Sbjct: 441 VFVWSAMIGGLAMHGCGNEAVDMFYKMQ-EANVKPNGVTFTNVFCACSHTGLVDEAESLF 500

Query: 487 TSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIYGN 546
             M   Y I P  +HY  ++D+L R+G  E+A +F++ MP+ P+ ++W ++L  C+I+ N
Sbjct: 501 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 560

Query: 547 VGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSFVE 575
           + LA    + + EL+  + G +VLLSNIYA+   W+ +   R  ++   + K  G S +E
Sbjct: 561 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 610

[Close]
BLAST of CmoCh05G011610 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 373.6 bits (958), Expect = 2.8e-103
Identity = 191/544 (35.11%), Postives = 316/544 (58.09%), Query Frame = 0 

Query: 34  ELKQIHSLMVTTSFIKNIIPCSRLIDFCANSELGDIEYARSVFDGIDQRSVYIWNSMIKG 93
           +LKQIH+ ++      +    ++LI   A+S  GDI +AR VFD + +  ++ WN++I+G
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 95

Query: 94  YCNGSDKFEALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLRYGQGVHSRIVKTGFELD 153
           Y   +   +AL MY  MQ    SPD FTFP +LK CS +  L+ G+ VH+++ + GF+ D
Sbjct: 96  YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 155

Query: 154 SYTCSCLLNMYVSCGDLSSGLKVFEF--IPKWNVVAWTSLIAGFVNNHQAREALRLFQDM 213
            +  + L+ +Y  C  L S   VFE   +P+  +V+WT++++ +  N +  EAL +F  M
Sbjct: 156 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 215

Query: 214 ENEGVEPNEITMATALAAAARCRDIDAGKFVHNRLWQLGYDPFETNSCFNVILATAIMDM 273
               V+P+ + + + L A    +D+  G+ +H  + ++G +           L  ++  M
Sbjct: 216 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE-------IEPDLLISLNTM 275

Query: 274 YAKCGKLETARNLFDKMPQRNLVVWNSMIGAYSQYGRGVEALGLFVDMGLAGFVPDKATF 333
           YAKCG++ TA+ LFDKM   NL++WN+MI  Y++ G   EA+ +F +M      PD  + 
Sbjct: 276 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 335

Query: 334 LSVISACTQLGFQSTGRSLHARVLKTSFGEYVTIGTALMDMYAKAGDADTALKIFSKLQK 393
            S ISAC Q+G     RS++  V ++ + + V I +AL+DM+AK G  + A  +F +   
Sbjct: 336 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 395

Query: 394 KDVMAWTTMILGLAINGKGEEALHMFRRMKAEADVAPDRVTYIGVLWACSHLGLVEEGQQ 453
           +DV+ W+ MI+G  ++G+  EA+ ++R M+    V P+ VT++G+L AC+H G+V EG  
Sbjct: 396 RDVVVWSAMIVGYGLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWW 455

Query: 454 QFTSMTEVYSIEPTMEHYGIMIDLLSRAGQFEEAQEFLKKMPMQPNATIWSSILNGCEIY 513
            F  M + + I P  +HY  +IDLL RAG  ++A E +K MP+QP  T+W ++L+ C+ +
Sbjct: 456 FFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 515

Query: 514 GNVGLANRVKSHIAELKHSSSGVYVLLSNIYARASNWQEMKLARDMLKHKRIGKTLGHSF 573
            +V L       +  +  S++G YV LSN+YA A  W  +   R  +K K + K +G S+
Sbjct: 516 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 568

Query: 574 VEVK 576
           VEV+
Sbjct: 576 VEVR 568

The following BLAST results are available for this feature:
BLAST of CmoCh05G011610 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9MA951.1e-17953.65Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th... [more]
Q9SJZ32.0e-10934.66Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Q9LN017.5e-10934.98Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823801.1e-10433.78Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LTV84.0e-10235.11Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
BLAST of CmoCh05G011610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G4L80.0e+00100.00putative pentatricopeptide repeat-containing protein At3g05240 OS=Cucurbita mosc... [more]
A0A6J1KG560.0e+0095.58putative pentatricopeptide repeat-containing protein At3g05240 OS=Cucurbita maxi... [more]
A0A6J1DAC79.6e-28584.42putative pentatricopeptide repeat-containing protein At3g05240 OS=Momordica char... [more]
A0A0A0LIL62.1e-28485.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021600 PE=4 SV=1[more]
A0A5A7TWI88.2e-27683.51Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
BLAST of CmoCh05G011610 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946762.10.0e+00100.00putative pentatricopeptide repeat-containing protein At3g05240 [Cucurbita moscha... [more]
KAG6599257.10.0e+0099.83putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
XP_023545826.10.0e+0096.99putative pentatricopeptide repeat-containing protein At3g05240 [Cucurbita pepo s... [more]
KAG7030257.10.0e+0099.45putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
XP_022999114.10.0e+0095.58putative pentatricopeptide repeat-containing protein At3g05240 [Cucurbita maxima... [more]
BLAST of CmoCh05G011610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05240.17.5e-18153.65mitochondrial editing factor 19 [more]
AT2G22410.11.4e-11034.66SLOW GROWTH 1 [more]
AT1G08070.15.3e-11034.98Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.17.9e-10633.78Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G12770.12.8e-10335.11mitochondrial editing factor 22 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 292..338
e-value: 5.7E-8
score: 32.9
coord: 184..227
e-value: 2.9E-11
score: 43.4
coord: 392..440
e-value: 2.4E-7
score: 30.9
coord: 83..129
e-value: 2.9E-10
score: 40.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 468..493
e-value: 1.6E-4
score: 21.7
coord: 155..181
e-value: 0.32
score: 11.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 266..294
e-value: 8.3E-4
score: 17.4
coord: 367..393
e-value: 0.0032
score: 15.5
coord: 294..327
e-value: 4.8E-6
score: 24.4
coord: 396..429
e-value: 5.6E-5
score: 21.1
coord: 85..118
e-value: 4.4E-8
score: 30.8
coord: 186..220
e-value: 2.4E-7
score: 28.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..423
score: 9.339086
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 292..326
score: 10.665402
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 261..291
score: 8.823904
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 83..117
score: 12.189023
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 12.134216
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 130..255
e-value: 2.4E-24
score: 88.3
coord: 423..573
e-value: 4.3E-20
score: 74.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 12..129
e-value: 6.8E-17
score: 63.8
coord: 256..361
e-value: 1.0E-19
score: 73.1
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 256..575
coord: 113..198
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 184..348
coord: 20..136
NoneNo IPR availablePANTHERPTHR47929:SF1SUBFAMILY NOT NAMEDcoord: 113..198
NoneNo IPR availablePANTHERPTHR47929:SF1SUBFAMILY NOT NAMEDcoord: 256..575
coord: 184..348
coord: 20..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G011610.1CmoCh05G011610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0080156 mitochondrial mRNA modification
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding