CmoCh05G010920 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAATATCGCCGGTGGCTCGGACTTCCCGGTCACCAAACTGTCTACGACGCTTCCAGCACTGGGAATTTGCAACCGTTTTTCGAGATTTGTTACCAGCCGTCGGATTATCATCGGATCTCAGATGGGTGACGTGTCGGAACGTGAGAGAAAGATCCTTGTGGCCGTCGACGAGGGCGAGGAGAGCTTGTACGCGCTCTCTTGGTGTTTGAGGAATGTAATTTCTCAAAATTCCAAAGATACCCTTATCCTCCTCTACGCTCGGCCACCCCGCCCGATTTACACCGCCATGGATGGCACTGGTAAGTAAATTCAAACTATCCAACGGTTATTTTGGTAATTTTGAAGTTTTTAATTTTATTATTATTATTATTATTTTGTAGGGTATTTGTTTTCAGCGGATATTATGGCCACGATGGAGAGGCATAGTCGTGACGTGGCGGCGGCCATTGTGGAGAAGGCCAAGAAGCTATGCAAGGATCTAAATAATGTGAGTTATTAGGGCTTTTTTTATTTATTAATTACCACGTCATTACTTCTCTAAAATTACGTGTAATATAATCACATTAAGTAATTTTTATTAAGTAATTTAGTGTTAAAAGGAAACAAGAGTTTAAATTAAAAATAAAATTTATAGTGGGAAGATATATTATAGGAGTGTTCTAGATATTGTGGTGTGAAATGACTATTGTACCCTTGAGCATTTAGAGAGATTATTTATTTTGAATTGATTAGAAAATGTGAAATGACGAAAATGGGGCTGTGGGAACAGGTGAAGGTGGAGACAAGAGTGGAAAGTGGAGATGCAAGGGACGTGATATGTGAGATGGTGGAGAAATTGGGTGCTGACGTGTTGGTCATGGGTTGCCATGGCTATGGTCCAATCAAAAGGTGACTATCTTGGTTCGGTTCGGTTCGGTTTGGTTGGTTCGATAAATATTTGAATTTTTTAAAATTCAATAAAAAAATGAGTGAATAAAGTGTTTGATATTAATTAAAATTTAATGGTTTGAAATATTTGCAGGGCGTTGATTGGGAGTGTGAGCAACCATTGTGCAAAGATTGTGAAGTGTCCCATTTTAATTGTAAAGAAGCCCAAAGACTCAGCTGCTTAGTAAATAAAAATGTTTATTTTTTTTTTAATTTTATTTTACATTTCGTAAAAAAAAACACACAATTATGTATGTGAAGTTTGTGTAGTTGATTTAAGCAATCAAGTTTTACTTTATTTAATGTATTATGGATTTTTTTTTTTAAAGAAATGATTAGATAAATATGGCAGATAGGTCTCAATATAAA TAAATATCGCCGGTGGCTCGGACTTCCCGGTCACCAAACTGTCTACGACGCTTCCAGCACTGGGAATTTGCAACCGTTTTTCGAGATTTGTTACCAGCCGTCGGATTATCATCGGATCTCAGATGGGTGACGTGTCGGAACGTGAGAGAAAGATCCTTGTGGCCGTCGACGAGGGCGAGGAGAGCTTGTACGCGCTCTCTTGGTGTTTGAGGAATGTAATTTCTCAAAATTCCAAAGATACCCTTATCCTCCTCTACGCTCGGCCACCCCGCCCGATTTACACCGCCATGGATGGCACTGGGTATTTGTTTTCAGCGGATATTATGGCCACGATGGAGAGGCATAGTCGTGACGTGGCGGCGGCCATTGTGGAGAAGGCCAAGAAGCTATGCAAGGATCTAAATAATGTGAAGGTGGAGACAAGAGTGGAAAGTGGAGATGCAAGGGACGTGATATGTGAGATGGTGGAGAAATTGGGTGCTGACGTGTTGGTCATGGGTTGCCATGGCTATGGTCCAATCAAAAGGGCGTTGATTGGGAGTGTGAGCAACCATTGTGCAAAGATTGTGAAGTGTCCCATTTTAATTGTAAAGAAGCCCAAAGACTCAGCTGCTTAGTAAATAAAAATGTTTATTTTTTTTTTAATTTTATTTTACATTTCGTAAAAAAAAACACACAATTATGTATGTGAAGTTTGTGTAGTTGATTTAAGCAATCAAGTTTTACTTTATTTAATGTATTATGGATTTTTTTTTTTAAAGAAATGATTAGATAAATATGGCAGATAGGTCTCAATATAAA ATGGGTGACGTGTCGGAACGTGAGAGAAAGATCCTTGTGGCCGTCGACGAGGGCGAGGAGAGCTTGTACGCGCTCTCTTGGTGTTTGAGGAATGTAATTTCTCAAAATTCCAAAGATACCCTTATCCTCCTCTACGCTCGGCCACCCCGCCCGATTTACACCGCCATGGATGGCACTGGGTATTTGTTTTCAGCGGATATTATGGCCACGATGGAGAGGCATAGTCGTGACGTGGCGGCGGCCATTGTGGAGAAGGCCAAGAAGCTATGCAAGGATCTAAATAATGTGAAGGTGGAGACAAGAGTGGAAAGTGGAGATGCAAGGGACGTGATATGTGAGATGGTGGAGAAATTGGGTGCTGACGTGTTGGTCATGGGTTGCCATGGCTATGGTCCAATCAAAAGGGCGTTGATTGGGAGTGTGAGCAACCATTGTGCAAAGATTGTGAAGTGTCCCATTTTAATTGTAAAGAAGCCCAAAGACTCAGCTGCTTAG MGDVSERERKILVAVDEGEESLYALSWCLRNVISQNSKDTLILLYARPPRPIYTAMDGTGYLFSADIMATMERHSRDVAAAIVEKAKKLCKDLNNVKVETRVESGDARDVICEMVEKLGADVLVMGCHGYGPIKRALIGSVSNHCAKIVKCPILIVKKPKDSAA Homology
BLAST of CmoCh05G010920 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.7e-11 Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 8.5e-10 Identity = 42/161 (26.09%), Postives = 74/161 (45.96%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09 Identity = 49/166 (29.52%), Postives = 76/166 (45.78%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy Swiss-Prot
Match: Q57951 (Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0531 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy Swiss-Prot
Match: Q57997 (Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0577 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.8e-05 Identity = 42/156 (26.92%), Postives = 73/156 (46.79%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy TrEMBL
Match: A0A6J1G3Q3 (universal stress protein PHOS32-like OS=Cucurbita moschata OX=3662 GN=LOC111450483 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 2.6e-86 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy TrEMBL
Match: A0A6J1KHF4 (universal stress protein PHOS32-like OS=Cucurbita maxima OX=3661 GN=LOC111493887 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.3e-85 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy TrEMBL
Match: A0A6J1DUV9 (universal stress protein A-like protein OS=Momordica charantia OX=3673 GN=LOC111023305 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 4.8e-72 Identity = 133/161 (82.61%), Postives = 150/161 (93.17%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy TrEMBL
Match: A0A0A0LIZ3 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033930 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 4.0e-71 Identity = 139/177 (78.53%), Postives = 154/177 (87.01%), Query Frame = 0
BLAST of CmoCh05G010920 vs. ExPASy TrEMBL
Match: A0A2N9FTD8 (Usp domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18370 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 6.7e-66 Identity = 122/163 (74.85%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of CmoCh05G010920 vs. NCBI nr
Match: XP_022946419.1 (universal stress protein PHOS32-like [Cucurbita moschata] >KAG6599190.1 Universal stress protein A-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030124.1 Universal stress protein A-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 327.8 bits (839), Expect = 5.4e-86 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CmoCh05G010920 vs. NCBI nr
Match: XP_023545332.1 (universal stress protein PHOS32-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CmoCh05G010920 vs. NCBI nr
Match: XP_022999559.1 (universal stress protein PHOS32-like [Cucurbita maxima]) HSP 1 Score: 325.5 bits (833), Expect = 2.7e-85 Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of CmoCh05G010920 vs. NCBI nr
Match: XP_038890240.1 (universal stress protein A-like protein isoform X2 [Benincasa hispida]) HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77 Identity = 146/162 (90.12%), Postives = 157/162 (96.91%), Query Frame = 0
BLAST of CmoCh05G010920 vs. NCBI nr
Match: XP_038890239.1 (universal stress protein A-like protein isoform X1 [Benincasa hispida]) HSP 1 Score: 289.3 bits (739), Expect = 2.1e-74 Identity = 146/176 (82.95%), Postives = 157/176 (89.20%), Query Frame = 0
BLAST of CmoCh05G010920 vs. TAIR 10
Match: AT3G62550.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 157.9 bits (398), Expect = 6.9e-39 Identity = 73/153 (47.71%), Postives = 113/153 (73.86%), Query Frame = 0
BLAST of CmoCh05G010920 vs. TAIR 10
Match: AT2G47710.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24 Identity = 58/153 (37.91%), Postives = 92/153 (60.13%), Query Frame = 0
BLAST of CmoCh05G010920 vs. TAIR 10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23 Identity = 65/171 (38.01%), Postives = 94/171 (54.97%), Query Frame = 0
BLAST of CmoCh05G010920 vs. TAIR 10
Match: AT3G11930.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 5.3e-23 Identity = 55/165 (33.33%), Postives = 97/165 (58.79%), Query Frame = 0
BLAST of CmoCh05G010920 vs. TAIR 10
Match: AT3G11930.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 5.3e-23 Identity = 55/166 (33.13%), Postives = 97/166 (58.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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