CmoCh05G009180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G009180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	AP2-like ethylene-responsive transcription factor
Location	Cmo_Chr05: 7074597 .. 7075169 (+)
RNA-Seq Expression	CmoCh05G009180
Synteny	CmoCh05G009180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGTGGGAAGCAAGAATTGGAAGAGTATTTGGCAACAAGTATTTATACCTTGGAACTTACGGTGAGTATTTCAACTCCAAAATTTATTAATTTCCAATGGTTCATAATGGTTAAGCGTTGATAACTTATAGGTACACAAGAGGAGGCAGCGAGGGCATACGACATAGCAGCAATCGAATATAGAGGCCTCAACGCAGTGACCAACTTCGAGTTGAGCAGCTACATAAGGTGGCTTAAGCCAAACCCAATGCAGCCTTCTCCACCATTGTCCTTTTCAATTGATACCAATACTACGAGTAATAACGCATTTATTCCGACCGCCCCACAAACGTCCCCTCGCACAGCGCTTGGCCTTCTCCTCAAGTCGTCCCTCTTCAAACATCTTATGGAGAAGAACGTTGTGAATGTCAATGGAAATGCCGAAATGGAAGAGGAGTACTCCATGGATGAAGGTAGAGCGCTACTCTCCTTTGTTGAACCTAATCCTTACTTGCACTTGCAATATTCATGTCAAGGAACCACCAACTTGTCACTCTCTACCCCTTTTCATTACTCCGCCTTGGCTTGA

mRNA sequence

ATGGGAGGTGGGAAGCAAGAATTGGAAGAGTATTTGGCAACAAGTACACAAGAGGAGGCAGCGAGGGCATACGACATAGCAGCAATCGAATATAGAGGCCTCAACGCAGTGACCAACTTCGAGTTGAGCAGCTACATAAGGTGGCTTAAGCCAAACCCAATGCAGCCTTCTCCACCATTGTCCTTTTCAATTGATACCAATACTACGAGTAATAACGCATTTATTCCGACCGCCCCACAAACGTCCCCTCGCACAGCGCTTGGCCTTCTCCTCAAGTCGTCCCTCTTCAAACATCTTATGGAGAAGAACGTTGTGAATGTCAATGGAAATGCCGAAATGGAAGAGGAGTACTCCATGGATGAAGGTAGAGCGCTACTCTCCTTTGTTGAACCTAATCCTTACTTGCACTTGCAATATTCATGTCAAGGAACCACCAACTTGTCACTCTCTACCCCTTTTCATTACTCCGCCTTGGCTTGA

Coding sequence (CDS)

ATGGGAGGTGGGAAGCAAGAATTGGAAGAGTATTTGGCAACAAGTACACAAGAGGAGGCAGCGAGGGCATACGACATAGCAGCAATCGAATATAGAGGCCTCAACGCAGTGACCAACTTCGAGTTGAGCAGCTACATAAGGTGGCTTAAGCCAAACCCAATGCAGCCTTCTCCACCATTGTCCTTTTCAATTGATACCAATACTACGAGTAATAACGCATTTATTCCGACCGCCCCACAAACGTCCCCTCGCACAGCGCTTGGCCTTCTCCTCAAGTCGTCCCTCTTCAAACATCTTATGGAGAAGAACGTTGTGAATGTCAATGGAAATGCCGAAATGGAAGAGGAGTACTCCATGGATGAAGGTAGAGCGCTACTCTCCTTTGTTGAACCTAATCCTTACTTGCACTTGCAATATTCATGTCAAGGAACCACCAACTTGTCACTCTCTACCCCTTTTCATTACTCCGCCTTGGCTTGA

Protein sequence

MGGGKQELEEYLATSTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTTSNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFVEPNPYLHLQYSCQGTTNLSLSTPFHYSALA

Homology

[Close]

BLAST of CmoCh05G009180 vs. ExPASy Swiss-Prot
Match: Q6X5Y6 (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP 59
           YL T +TQEEAA AYD+AAIEYRG NAVTNF++S+YI  LK   + P P
Sbjct: 194 YLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVFPFP 242

[Close]

BLAST of CmoCh05G009180 vs. ExPASy Swiss-Prot
Match: Q94AN4 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-08
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM 55
           YL T +TQEEAA AYDIAAIEYRGLNAVTNF++S Y++   P NP+
Sbjct: 187 YLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPENPI 232

[Close]

BLAST of CmoCh05G009180 vs. ExPASy Swiss-Prot
Match: A0JPZ8 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana OX=3702 GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 15  STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPN 53
           +TQEEAA AYDIAAIEYRGLNAVTNF++S   R+L PN
Sbjct: 176 ATQEEAAIAYDIAAIEYRGLNAVTNFDVS---RYLNPN 210

[Close]

BLAST of CmoCh05G009180 vs. ExPASy Swiss-Prot
Match: Q6PQQ3 (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana OX=3702 GN=AIL5 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-07
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSY 46
           YL T STQEEAA AYDIAAI++RGLNAVTNF++S Y
Sbjct: 332 YLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRY 367

[Close]

BLAST of CmoCh05G009180 vs. ExPASy Swiss-Prot
Match: Q1PFE1 (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana OX=3702 GN=AIL1 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSY 46
           YL T STQEEAA AYDIAAI++RGLNAVTNF+++ Y
Sbjct: 352 YLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRY 387

[Close]

BLAST of CmoCh05G009180 vs. ExPASy TrEMBL
Match: A0A6J1G4W8 (ethylene-responsive transcription factor WRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111450835 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.5e-75
Identity = 147/150 (98.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 70
           YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT
Sbjct: 181 YLGTYGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 240

Query: 71  SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 130
           SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV
Sbjct: 241 SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 300

Query: 131 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 160
           EPNPYLHLQYSCQGTTNLSLSTPFHYSALA
Sbjct: 301 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 330

[Close]

BLAST of CmoCh05G009180 vs. ExPASy TrEMBL
Match: A0A6J1KFT6 (ethylene-responsive transcription factor WRI1-like OS=Cucurbita maxima OX=3661 GN=LOC111493509 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.7e-71
Identity = 139/149 (93.29%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 70
           YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL PNPMQPSPPLSFSIDTNTT
Sbjct: 181 YLGTYGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLNPNPMQPSPPLSFSIDTNTT 240

Query: 71  SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 130
           SN+AFIPTAP+TSPRTALGLLLKSSLFKHLMEKNVVNVNG+AEMEEEY MDEGRALLSFV
Sbjct: 241 SNSAFIPTAPRTSPRTALGLLLKSSLFKHLMEKNVVNVNGDAEMEEEYPMDEGRALLSFV 300

Query: 131 EPNPYLHLQYSCQGTTNLSLSTPFHYSAL 159
           +PNPYLHLQYSCQGTTNLSLSTPFHY AL
Sbjct: 301 DPNPYLHLQYSCQGTTNLSLSTPFHYFAL 329

[Close]

BLAST of CmoCh05G009180 vs. ExPASy TrEMBL
Match: A0A0A0KJ57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.2e-41
Identity = 111/182 (60.99%), Postives = 123/182 (67.58%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLK----PNPMQP-SPPLS--- 70
           YL T STQEEAARAYDIAAIEYRG+NAVTNF+LS+YIRWLK    PNP Q  SPP+S   
Sbjct: 188 YLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLKPQTNPNPKQQLSPPISSSL 247

Query: 71  FSIDTNTTS---------------------NNAFIPTAPQTSPRTALGLLLKSSLFKHLM 130
           F ID NT +                     NN  IPT PQTSPRTALGLLLKSSLFKHL+
Sbjct: 248 FPIDYNTNNTLKSSNNDLHFPIFQSINNDDNNVIIPTNPQTSPRTALGLLLKSSLFKHLV 307

Query: 131 EKNVVNVNGNAEMEEEYSMDEGRALLSFVEP---NPYLHLQYSCQGTTNLSLS-TPFHYS 159
           EKN+VNVN     EE+   +E R LL FV+    NPY +L Y CQGTTNLSLS TPFH+S
Sbjct: 308 EKNIVNVN----EEEDPKDNEVRGLLDFVDDSNINPYFNLHYPCQGTTNLSLSTTPFHFS 365

[Close]

BLAST of CmoCh05G009180 vs. ExPASy TrEMBL
Match: A0A1S3C431 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3656 GN=LOC103496639 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.4e-38
Identity = 106/186 (56.99%), Postives = 120/186 (64.52%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLK--------PNPMQP-SPPL 70
           YL T STQEEAARAYDIAAIEYRG+NAVTNF+L++YIRWLK        PNP Q  SPP+
Sbjct: 190 YLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLNTYIRWLKPQTNPNQNPNPKQQLSPPI 249

Query: 71  ---SFSIDTNTTS----------------------NNAFIPTAPQTSPRTALGLLLKSSL 130
               F ID NT +                      N+  IPT PQTSPRTALGLLLKSSL
Sbjct: 250 ISSLFPIDYNTDNTLKSSNKDLRFPIFQSINNDHDNDVIIPTTPQTSPRTALGLLLKSSL 309

Query: 131 FKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFVEP--NPYLHLQYSCQGTTNLSLS-TP 159
           FKHL+EKN+VN N     EE+   +E R LL FV+   NPY +L Y C GTTNLSLS TP
Sbjct: 310 FKHLVEKNIVNANNE---EEDPKDNEVRGLLDFVDDSNNPYFNLHYPCLGTTNLSLSTTP 369

[Close]

BLAST of CmoCh05G009180 vs. ExPASy TrEMBL
Match: A0A6J1DD61 (ethylene-responsive transcription factor WRI1-like OS=Momordica charantia OX=3673 GN=LOC111019289 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-19
Identity = 66/119 (55.46%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNT- 70
           YL T STQEEAARAYD+AAIEYRG+NAVTNFELSSYI WLKP+    S   + SI  +  
Sbjct: 192 YLGTYSTQEEAARAYDMAAIEYRGINAVTNFELSSYITWLKPHSQSHSHHYNSSIFQHNI 251

Query: 71  ----TSNNAFIPTAPQT----SPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSM 120
               T+   F  TA  T    + RTALGLLLKSS+F+ L++KNV+N++G+ + E++ SM
Sbjct: 252 PLPDTATYLFQATAAATTTADTSRTALGLLLKSSVFRDLLQKNVLNIDGD-QAEDQISM 309

[Close]

BLAST of CmoCh05G009180 vs. NCBI nr
Match: XP_022946897.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita moschata])

HSP 1 Score: 290.4 bits (742), Expect = 9.2e-75
Identity = 147/150 (98.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 70
           YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT
Sbjct: 181 YLGTYGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 240

Query: 71  SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 130
           SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV
Sbjct: 241 SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 300

Query: 131 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 160
           EPNPYLHLQYSCQGTTNLSLSTPFHYSALA
Sbjct: 301 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 330

[Close]

BLAST of CmoCh05G009180 vs. NCBI nr
Match: KAG7029983.1 (AP2-like ethylene-responsive transcription factor BBM2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 145/150 (96.67%), Postives = 146/150 (97.33%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 70
           YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSI TNTT
Sbjct: 126 YLGTYGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIHTNTT 185

Query: 71  SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 130
           SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNG+AEMEEEYSMDEGRALLSFV
Sbjct: 186 SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGDAEMEEEYSMDEGRALLSFV 245

Query: 131 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 160
           EPNPYLHLQYSCQGTTNLSLSTPFHYSALA
Sbjct: 246 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 275

[Close]

BLAST of CmoCh05G009180 vs. NCBI nr
Match: XP_023546415.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.6 bits (719), Expect = 4.3e-72
Identity = 142/150 (94.67%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 70
           YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT
Sbjct: 181 YLGTYGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 240

Query: 71  SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 130
           SNNAF PTAP+TSPRTALGLLLKSSLFKHLMEKNVVNVNG+ EMEEEY MDEGRALLSFV
Sbjct: 241 SNNAFTPTAPRTSPRTALGLLLKSSLFKHLMEKNVVNVNGDVEMEEEYPMDEGRALLSFV 300

Query: 131 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 160
           EPNPYLHLQYSCQGTTNLSLSTPFHYSALA
Sbjct: 301 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 330

[Close]

BLAST of CmoCh05G009180 vs. NCBI nr
Match: XP_022998979.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 139/149 (93.29%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 70
           YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWL PNPMQPSPPLSFSIDTNTT
Sbjct: 181 YLGTYGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLNPNPMQPSPPLSFSIDTNTT 240

Query: 71  SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 130
           SN+AFIPTAP+TSPRTALGLLLKSSLFKHLMEKNVVNVNG+AEMEEEY MDEGRALLSFV
Sbjct: 241 SNSAFIPTAPRTSPRTALGLLLKSSLFKHLMEKNVVNVNGDAEMEEEYPMDEGRALLSFV 300

Query: 131 EPNPYLHLQYSCQGTTNLSLSTPFHYSAL 159
           +PNPYLHLQYSCQGTTNLSLSTPFHY AL
Sbjct: 301 DPNPYLHLQYSCQGTTNLSLSTPFHYFAL 329

[Close]

BLAST of CmoCh05G009180 vs. NCBI nr
Match: KAG6599026.1 (Ethylene-responsive transcription factor WRI1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57
Identity = 126/150 (84.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 70
           YL T  TQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT
Sbjct: 178 YLGTYGTQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSPPLSFSIDTNTT 237

Query: 71  SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDEGRALLSFV 130
           SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDE        
Sbjct: 238 SNNAFIPTAPQTSPRTALGLLLKSSLFKHLMEKNVVNVNGNAEMEEEYSMDE-------- 297

Query: 131 EPNPYLHLQYSCQGTTNLSLSTPFHYSALA 160
                        GTTNLSLSTPFHYSALA
Sbjct: 298 -------------GTTNLSLSTPFHYSALA 306

[Close]

BLAST of CmoCh05G009180 vs. TAIR 10
Match: AT3G54320.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP 59
           YL T +TQEEAA AYD+AAIEYRG NAVTNF++S+YI  LK   + P P
Sbjct: 194 YLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVFPFP 242

[Close]

BLAST of CmoCh05G009180 vs. TAIR 10
Match: AT3G54320.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP 59
           YL T +TQEEAA AYD+AAIEYRG NAVTNF++S+YI  LK   + P P
Sbjct: 120 YLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVFPFP 168

[Close]

BLAST of CmoCh05G009180 vs. TAIR 10
Match: AT3G54320.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKPNPMQPSP 59
           YL T +TQEEAA AYD+AAIEYRG NAVTNF++S+YI  LK   + P P
Sbjct: 194 YLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLKKKGVFPFP 242

[Close]

BLAST of CmoCh05G009180 vs. TAIR 10
Match: AT1G16060.2 (ARIA-interacting double AP2 domain protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM 55
           YL T +TQEEAA AYDIAAIEYRGLNAVTNF++S Y++   P NP+
Sbjct: 117 YLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPENPI 162

[Close]

BLAST of CmoCh05G009180 vs. TAIR 10
Match: AT1G16060.1 (ARIA-interacting double AP2 domain protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 32/46 (69.57%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 11  YLAT-STQEEAARAYDIAAIEYRGLNAVTNFELSSYIRWLKP-NPM 55
           YL T +TQEEAA AYDIAAIEYRGLNAVTNF++S Y++   P NP+
Sbjct: 187 YLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRYLKLPVPENPI 232

The following BLAST results are available for this feature:

BLAST of CmoCh05G009180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X5Y6	2.0e-08	65.31	Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q94AN4	5.9e-08	69.57	AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thali...	[more]
A0JPZ8	3.8e-07	76.32	AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thali...	[more]
Q6PQQ3	5.0e-07	77.78	AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana O...	[more]
Q1PFE1	1.1e-06	75.00	AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana O...	[more]

BLAST of CmoCh05G009180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4W8	4.5e-75	98.00	ethylene-responsive transcription factor WRI1-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KFT6	6.7e-71	93.29	ethylene-responsive transcription factor WRI1-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A0A0KJ57	4.2e-41	60.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1	[more]
A0A1S3C431	3.4e-38	56.99	AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3...	[more]
A0A6J1DD61	1.6e-19	55.46	ethylene-responsive transcription factor WRI1-like OS=Momordica charantia OX=367...	[more]

BLAST of CmoCh05G009180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946897.1	9.2e-75	98.00	ethylene-responsive transcription factor WRI1-like [Cucurbita moschata]	[more]
KAG7029983.1	2.3e-73	96.67	AP2-like ethylene-responsive transcription factor BBM2, partial [Cucurbita argyr...	[more]
XP_023546415.1	4.3e-72	94.67	ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998979.1	1.4e-70	93.29	ethylene-responsive transcription factor WRI1-like [Cucurbita maxima]	[more]
KAG6599026.1	1.3e-57	84.00	Ethylene-responsive transcription factor WRI1, partial [Cucurbita argyrosperma s...	[more]

BLAST of CmoCh05G009180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54320.1	1.4e-09	65.31	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.2	1.4e-09	65.31	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.3	1.4e-09	65.31	Integrase-type DNA-binding superfamily protein	[more]
AT1G16060.2	4.2e-09	69.57	ARIA-interacting double AP2 domain protein	[more]
AT1G16060.1	4.2e-09	69.57	ARIA-interacting double AP2 domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 3..47 e-value: 0.0088 score: 9.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 1..41 score: 8.913017
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 5..43 e-value: 8.9E-9 score: 37.4
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 11..57
None	No IPR available	PANTHER	PTHR32467:SF116	BINDING PROTEIN, PUTATIVE-RELATED	coord: 11..57
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 16..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G009180.1	CmoCh05G009180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity