CmoCh05G008420 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G008420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein pelota homolog
Location	Cmo_Chr05: 5273442 .. 5282657 (+)
RNA-Seq Expression	CmoCh05G008420
Synteny	CmoCh05G008420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCCCGCGAGAAAAAACTAAACCTAATTCCAGTTTAGGGCATTTTGATTTTGGCATATTTGATTGAAATTCGTTACTATAAAGGGAGAGGCATTGAGATAGATATTAGGAATTCAAACTTTCTGGTGGAATTATGAAGATCGTACGCAAACAGCTTGATCAGAATGGGTCTGGTAGTGTCAAGGTATTGCCAAAACTTGTTAAACACGATTAAAAATTCTATTATTTTTCCTACCCTTTGCGCGTTCGATCTTCTTGTTCTTTTCTGGAACCGAATTTCTTTGAATGAAAGTATGTATTACGCGGCGATTCTTCTCGTCACAAGATTTTTATGTGGAACACAATTGATCGATATATATATCTGTGGCTGATTTCTGTTCTGGAGTCTTGTTGGGGCAGATGGTGCCACTTGATTCAGATGATCTATGGCATGCGTTCAATTTGATTGCTCCGGGAGACACTGTTATGGCTGTCACCGTTAGGTATCTCATTCTGCCATGCTCAAGTTCTTATTTCTAATCTAATTTTTATTGTATTTAAGTATACTTTTATTTTGGGTTTATTTTTCTGATGCAAGTTTGGATAAAAAATATCAGTTTTAACACCAGCAGTTAGCAAAGTGGGTCAATCTCAGCCTTTGAACTTTGAATTTTATTAATTGAACCCTAAACTTGGATGAATGGTTAATTTGTACTTCCTAAAAACTACAAATTGAAAATTTCCCACCAATTGACTACTTCATTACGCAAATTTCGACGAACAAAATACTAAGAATCAAACCACAAAAGTTCCCAAACCCAACTATTACAAAGCTGAAACTTAGCCACACAACATAGCAGGTAAAAAGGCACTCCAACAATGCAATGAAATGTTCAAATCTAACATGACCAGAAGAACTAATACTCTTTTTTTTTTTTAAATGAAAACTGGTTTGGCAACTAATTTTGAAGCTTATTCAAGCTTGGGATTTACTTTGATAAAGTCGAAGATTTAAGGTTAAAATTGGTGTATTGAGAGCTTAGTTAGAGTTCCCCTGAGTTCTTTGGCTTCTTATTTATATACTCGTTTGGCATGCATATGATTGATGACAGGAAAGTCATCAGAGAGATGGCTTCTGGAGGAAGAGATGCAGAACGAGTGAAACTCAAGCTAGAAATAAAAGTTGAGGAGGTATGAAATTCTAACAACTTATTGACATGGCAAAACAAATGTAAGAATTGGTGGTCCTGTGAGAACTGTTATAAATTTTCCATGAATTGGTAGAATAGTTCAAGTGCGTTATTCTTGTGTTTAAGGTACTAAGAATTGTTATAATTTAAATGGTAGTGCTTATGCTAGTTCAGCACCGTCCAGGATATGTAGAGCTCTCACTACCCCTATTCTATAAATGTAGATTTTTCCAAAGAAGAAGATGAGAAATCCTCTTGGAAGAGACAAAGTTGAAGTAGCAACTCCCATTTGTTTTGAACTAAAACTTCTAATTAGAAGAAGGAAATTCACCGAACTCTGGATACCAAGATACTAATGGATTTCTTAACCAACTAGGATCCTATTTATCCACTCTATCCTCATAAAACGACAATAAAACGTAAGATTATAGCCCCAGAAACCATTATTCAAAAATATGAAATAGTGTTAATAATTTCTAAGCTTTTCATTATGCATTCCACGTCCTTATTCTGCACTTATTTTGTGTACACTTTGAAGATGCATCCCATATAACTTTTGTTCACATGGAACATATTTTAGGTGGCAGATTATGACAAAGTTGGATCTGTTTTGCGTATACGTGGAAAAAATATTCTGGAAAATGAGCATGTGAAGGTAAGTACAGTGTTAATTATTTTGTTTTTATTATTTTTAGAACAAAAAACAACTTCTCATTGATATAATGAAAAGGAATAAATGCTCAAGGGAGAACTTAGAGATAATGCAATGAAATAGAGATTATTCCAGAGAATACTAATTTTTATTATTATTTTTAAAGAACCAAACTTTCATTAGAAAAAAATGAAAGACACAAGGACATTAGATATAAGAATCCCATTAAAGAAGTCCTACTAAAGAAGGGGACTCCAGTCAAGAAAAATAAATCTTTTAAACAATAACATAGCCAAGTTTTGCTTTTATTAATTCTAGTGATTTTCTTTTTCCTTTCTAAAAGAGTAGTCATATATTATCGTTTGGATATTTAAGGGATGATTTAGCTTATTAACTACTAATGCTTCATTTCAGATAGGGGCTTACCATACTTTAGAACTTGAGCTGCATCGGCCATTTGTTTTGAGAAAGGTAAAATTTTTCCTTGTGCTTTAAACATCGGGTGACATATAACTTCTCAATCTCTGTACATTTCCCAAAATGTTGTTTTTCTGCACCCAGCCCCCTCCAAAAAATTAAACCCTTCAACAAATCGTTTGTCAATGTTTTGTAATTAGAGCTCCCACCCTGTTTTTGATAAGAAACTGATTCTTTCTCTTAGGTTTGATTTTCTTGGATTAGATCCATTTTGCGTATAGCTAGTTAGCGTTCTTTTGTTGTGCTGGATTTTATTTCTCTCCCTGCACTCTTCTATTGTTCTCCATGAAAAGTCACGTTTTCATAAAAAAACAAATACTGACGAGGAGAAATTCTTCCCCATTTTCTAGGATGTTTGGGACTCTTTTGCTCTAGATGTACTTCATCAAGCCTCTGGTATGTTTCTGGGTAAACTATTACTGCTTTTGTCATATTATAAATGAATTGATGTTCAATTGGTTGCATTAAATATACTACTGTGCATTGATTTTCTTCACATAGAGTATAATTACTTTTTTAAAAAACTTATTTTAAAATTTTTTTTTACAAGGAACATCTTCTTATTGATATAATGAGAACGGAATAAGAGTTCAAGGGATACAAACTGTAAAAAGGAGTGGAAAAGAAAAATGTACAAACAACAAATATAACCTTATAGATATTAACCAAGAAACTAAATAAATTTTTAAGGAACCAAGATTCTTTCTAATATCTTTGATTGGAAGAGTTGGAGAGCTTACAAAAGAATGATGAAACTATGAATAAGGCCTCCACCAAATGCTAAAAATTAATTGCTACTTCAAATATTCCAAAGAAAACCAAAAATTGATCACCAATAAACAAAAAAACCTTTTAAAATACATCACAAGGCATCCTGATGCAACAAAACCAGAAAGCTTCTCAATACCAAAAAGATTGATTCCATCAAATTCTATACTAAAAGCCAAATCTGCGTATGATTGCTCGATAAACTCTTTAGTGCATATGATCACCAATAAACAAAAAGTCCTTTTAAAAGCAATCACAAGGCATCCTGATGCAACAAAACCAGAAAGCTTCTCAATACCAAAAAGATGGATTCCATCAAATTCTATACTTCAATCCAAATCTGCATATGATCGCTGATAAACTCTTTAGTTTTGCAAGAACAACCATCCCATGAAAAGAAACTTCGGAAGAACCACCAACAAAGTAGTAAACAAAGGAGTAAAAATTCTCTTCATGCAAAGTTAATCCAATTATCTTAGATAAGAAACAAAACTGTGCAAAGCTAAACCATGCCATTCTTAAGCCAAAAGAGAAATTTCACGAAACTCAAGACCACAAGCTTCTACAACAAAACAAATTTGGCCAATAAAGATGAAGAAATAGGAGGGGTCTTCTTGTCACAATCTTGAAATAGTAAGTCAAAAGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAGGAAAATCTTCAAGTACATCAACCTGCATACAACAATCCACTGGCTGAATGACTGGTTCCACACTACTCAAACTTACCTTTGAGTCAACCTCTGAGGTGTGACCATGAGGTGTAGGGTACTTTGTCAAGTGAACAACTTCTCTTGTTAAACCATCTAGATCCAAAGGAGTGAAGACAAATGGTTGTTTTGGGGTAAGATAGGTGAAGGGGTGGGTGGAAAGGGGACATTCTGATCATAGGGTGTAACATCTTTGTGCATCTTTCTTCAATTAAATCTGAATTTCAAAAGTTCTCTTCTAAGTATGGATGAAAGGAAGAAAGTGCCCTTTTTAACGAGAATAGAACAAATGATAGACTGGAATAAAGCCATTTCCCCCCGTTTCCCCTTCTTAACACCTAGGGGCTTGGAAGTCTTAAAATCCAAATGAGAGATTTCTAAAGGAGGCTTGGGAATATCCCAGTATAGTGCGCAATTATATTTTTTGAGTTCAACATGTCTGGGTTGAAATTTGAACATTTGACATTTTAGTTGAGGATAGATTGCCTTAACTACTTGAGCTATTCTCATGGTGGCTACTGCTAAATTAATATTTATAAGAAACCAATATGGTTGATTTTATTGTTGAAAACATTTAATGAAGGTAATTGATTCTAGGTTTATTTTAAGGTCGATCTGGAAAGAAGCATCTACTGTTCTGTTTTTGAAATAGTTAGAGGTCGTGCATATCAAACTTCCAAATATTTTTCTTAGAATTATTTAGACAGTGATCAGCTAGCTATGGTAGGCGTTTCCTTTGTTATAATTATAATTACTATCTATAGTAGTCTTTAGCATATGTCGAGGAGGATGATGAATGGTTGCTGACTTCTATACACCTCAGATCCTGCTGCTAGTGCTGACTTGGCCGTGGTTTTAATGCAAGAAGGATTAGCACATGTTCTCCTTGTCGGAAAAAGGTAACTTTATTGTTATTGGGATAACATTTAGGTTTTCCCATATAAATATATGTAAGCAGTCATTTTGACAGACGGAAGGAGATGGGTTTTTTCTAAAATATTTATCCTCTGCATATCTGGAATTACTTACATGAAGACATGCTTGGTCTTGTTAATTATTTTTAGGTGAAATTATACCGTTGGTCCCTAAGTTGTATAGTGCCTATTTCGTTTATGAGATTTCAAAGGCAACACTTTGGTCCTTGAGGTTTGAAAAATAATTCTAAATGGTCCAGGGTTAGTTGACTAAGCAGAAAAATGACAAGCAGTTACTGAGACTCCACTGCGTGTCATTTTTAAGTGAGTAAACCAAGAAATATTAATTTTATATTATTTATTTTTCTATTACGACCTTTTCTCTTTCGTCCGTCTTTCTCTCATCCCTACTCTATTCTTCATTTTCCTCCTCCTTCAGCAGTTCTTGCCACCACCACGGTTGGCGTGATAGTGTCTTCGTTCCTACTCTCTCCCTTCTTTGTTTTCTTATGTGGATTTTTTGCCACTATTCTTCTTGTTACTGTTCTTCTACCTGGTCTTTCCTCTATTTTCTTCTTCAACCATCCCACTGTTCTTGTAGTTCTTCATATTTACAAAATTGTTACTTTTATAATTCTGAAAGACATTACAATCAGACCCCTTTGGCTTGAAGCTATTCCACCCACTATCAAACACATTAAGTGAATTAATTTCATATCTAGTTGAACTCAGATTGCTAATGCTGCTAGTGTTGCTCCAATTATTAAGATCATAACAAACACTCAGCTTTAAAACTATTCTATCCATCATTAAACCTATTGACATCAGAAATTCAGAATCAGACACTTCGGGCTTAAACTTTTTTAGCAAATTTACCTCTCCACCATTTCACGCATCGAAATTCCTCCTCCTTGTGCCTTTTCGAGACTGAAAAAAATTGCTTTATATAGAATTGTTGCGCAATAGGTTCGCCAGATTCCCTGTTTGCAGTGTTTGACATTGCACACATTGATTGGCTTCCATGGCCAACATCCTTATTTCATTATTTTGTCTCTTTAACTTGATAGTATTGCTCTTTTAAATTCAACTTTTGTCCGAGGACTTGACTTTAGAACAAGGATAAAAAAGGAAGACACGTGGGGTTTTTTTTTTTAGTTTGGTTGTGAGAGAGGAGAACTGGTTGGCAGAAAGAGGATAGAAGATGAAGACGCTTTAGTACGAGGACAATGATCATGGCAGTAGTGTGGCAGCAAGATCTGCTGAATGAGGATGAAAATGAAGAATAGAGGAGTAGGGACAAGAGGAAGGAGGGAGAAAAAGAGAAAAGGCCACATAAGAATATATATAATATGAAATTAATTTTTTCCCAACTCATTTAAAGATGACGCATAAGCAGTCCCAACCAACTAATTGTCATGTCATTTTTCTACTCCGTCAACTAACTCTAGGGATCATTTAGAACTATTTCCCGCACTTTAAGACTAAAGTGTTGCTTTTGAAACTTTAGCAGCTAAATAGACTCTTAAGTATAAACCTCAGGGACAAAAAAAATGTAATTTTCAGTGAGGATCCTGGTCTAATCTGTTTTTCTTCTCTCCATAAAAATAACTGTTTTATCGACAGGAATGGAATATTTAAAGACTAGAAGGAGAGTAAATTAGATTGGAGACTATGAAGAAAAGGGGAATAATTACAGAACAATTACATGTTGGAGAAGTTGAAATTTGATACTCCACAAATTAGATTTCTTGCAATTCTTTCTACATCAATTCATTATCTTTCAAATTCTAATTCAAATGTCCAAAATCATGTTTAACTAGTGTCAGGTATCTGAGTGTTCAGGATGTGTCAGACATGGACTCTTTTGCCACAATTAATGCCCTGGCTCAGTTTTCCATCCAATAAAAGAAAGCAATTTCTCTATTCGTTGTTCACTTTCTGTCAGAATGTTATCTAACTATTGCAGCGCTATGCAAGTGATTTTGGTTGTTTGTGTTTTAATGTTAGGATGATTTTTATATTACAGTATGACAATTACTCGAGCTCGAATCGAAACTTCAATTCCTCGCAAGCATGGGTCAGCCATTGCTGGTTATGAGTCGGTATGATTCTGCTAGCCAGAGTCACTTTTCACTTCTCTTTAGATCAGTGCTGCAGACAATAATGTTCTAGTCATTAGTAGGGTAGAAACTGATGTCTCCAATTTTTTTTTTTCTTCCACAGGCCTTGAATAAATTCTTCGAGAATGTTTTACAGGTATGTCTTATCAAAATTTTAATGTTTTGCAGGCCTTAAATAAGCATAGTAATGCCTTGACTATGTTCTCACGTTAGTGAACAAACTTAGGCATGTCTTTTTAGGTTCTAACTGGTTTTTGTGCTTTATGTAGGCTTTCTTGAAGCATGTTGATTTTAAAGTGGTACGCTGTGCAGTGATAGCTAGTCCTGGATTTACCAAGGTCCGAAGTAAACCCAAAATACTCTCTCTAACATAATTAAAAATGGAACTTGAAAATAGGCTTTTGGCAACGAATCTTGTTGGATGATGAAAAACTAATTATTATATATATTTTAAGTCCTGTTTGATAATGATCTCATTTTTTTCAGTTTTCTGTTTTTGAAATTTATGCTTGTTTTCTCCAATCTTTCATTTTATGGTTTTCATATTTCTAAAAGAAAAGTCGAACTTTTATCCAAATTCTAGAAACAAAAACAAGTTGTTAAACTACTTTTTATTTATTTTTATTTTTTTTTATTTTTAGTTTTCAAAACTTGGCACGGTTTTTGAAAATGTTGGTAGAAAGTGGATAACAAAATAATGGAACTGGTGTTTATGAGCCTAACTTCCAAAAACCAAAATCCAAAAACAAAATGGTTATTGAACGAGCCCAGTAATTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGTTTGAATTACATTGGACTTTATATTCATTTTTATAATTATTTTAGCTTAATTTTGTTTTGCTATCCGTGCTTTAGGATCAGTTCCATCGGCACTTATTATTGGAAGCTGAAAGAAGACAGCTAAGACCTATTATCGAGAACAAATCCCGCATAATTCTAACACATACAACCTCAGGATACAAGTATGGTCTATATTTTTCTCTCTGAAGCTGAATTATTTAAAGAAAATTAAAAATCTCAAATAGTTAATCATATTCTTTTTCTTGATAGGCATAGTTTACGAGAGGTTTTGGATGCTTCAAATGTCATGAATATGATAAAAGACACTAAAGCAGCTCAAGAGGTTCTTTACGTTCTATGTTGCCAAATTTCACATGTACAACCGTGCACTAGTGTGCATTAATGTCCCCAAGTTAATTTCCTTTTTCCCCTTTTTCCTTTTCTTCTGTCTAGGTGCGAGCTCTAAAGGATTTCTTTACCATGCTCTCTAATGTGAGTTTCCAGTTCTATTTTTTCTGCATTGAAGTTATTTTCCTCTTATGTATTAACATATTGTGGTTGTCTGCATATTTATTACTTTAACAAAGACAACCTTATAGATTCTGTCTTGGTTTTGTTGAACTCATGTTGTGACTGTGCAGGAGCCAGACCGTGCTTGTTATGGACCAAAACACGTGGAGGTTGCCCATGAACGAATGGCTATTCAAACGCTTCTCATTACTGATGATCTCTTCAGGTGTCGTTTCCCCTAACCATTTTGTGACAAGTTTCTCTGTACTGTTGTGTCGATGTGCAATCATATTAAGTTTATAAAACGAATTTGCGGGCTCAATGTTATCTGAGCATTCATGAAATTCAACAAACATTTCGTGCAATCTTCTTTGCCATTGGGGCTAGAAAGTTTGGCCTCATGAGCTCTTTCATCGTAGTAGTCAGCATAGCGCATTGGCATAGAATAAACATAGTTGTTTAATTTAACAACATAATTTTGTGCAGGAATAATGATATAACGGAGCGACAAAAATACGTCAATTTGGTCGATTCAGTCAAGGATTCAGGTGGCACCGTTCATATATTTTCATCCATGCACGTCTCTGGAGAGCGTAAGTATATGTTTTCGATCATTACTTTTAATGAAAAAAACGAGTGGTTGGTTCATCTTACCCTTGATGTTGGATGAAAACGAATTCTAATTGTTTTGGTACGAACAGAACTCGCTCAGATAACTGGAATTGCAGCAATCCTTCGATTTCCTCTGCCGGAACTCGAGGACATAGAGATGTAAATGCAATGAAGAAAGGTTATTTAATTTAGGGCCATGGGGGCCTGCAAGTAATAAGACAAGACACTCAATATCTCTGTATTCTTCTTAAACTGTAGATTGAATGAAGGGTGTGGTGTACCCTTAGATTATGTAAATCTTGTGTAACTTTACAAGTGTGTATGTTATATTTTGCCACAACTTTTACACTTATATAGAACTAAATATAAGGATTAATATCAATTAGAGAAAAACAGGAGAATTAATTAGATAATAGTGA

mRNA sequence

AAACCCCGCGAGAAAAAACTAAACCTAATTCCAGTTTAGGGCATTTTGATTTTGGCATATTTGATTGAAATTCGTTACTATAAAGGGAGAGGCATTGAGATAGATATTAGGAATTCAAACTTTCTGGTGGAATTATGAAGATCGTACGCAAACAGCTTGATCAGAATGGGTCTGGTAGTGTCAAGATGGTGCCACTTGATTCAGATGATCTATGGCATGCGTTCAATTTGATTGCTCCGGGAGACACTGTTATGGCTGTCACCGTTAGGAAAGTCATCAGAGAGATGGCTTCTGGAGGAAGAGATGCAGAACGAGTGAAACTCAAGCTAGAAATAAAAGTTGAGGAGGTGGCAGATTATGACAAAGTTGGATCTGTTTTGCGTATACGTGGAAAAAATATTCTGGAAAATGAGCATGTGAAGATAGGGGCTTACCATACTTTAGAACTTGAGCTGCATCGGCCATTTGTTTTGAGAAAGGATGTTTGGGACTCTTTTGCTCTAGATGTACTTCATCAAGCCTCTGATCCTGCTGCTAGTGCTGACTTGGCCGTGGTTTTAATGCAAGAAGGATTAGCACATGTTCTCCTTGTCGGAAAAAGTATGACAATTACTCGAGCTCGAATCGAAACTTCAATTCCTCGCAAGCATGGGTCAGCCATTGCTGGTTATGAGTCGGCCTTGAATAAATTCTTCGAGAATGTTTTACAGGCTTTCTTGAAGCATGTTGATTTTAAAGTGGTACGCTGTGCAGTGATAGCTAGTCCTGGATTTACCAAGGATCAGTTCCATCGGCACTTATTATTGGAAGCTGAAAGAAGACAGCTAAGACCTATTATCGAGAACAAATCCCGCATAATTCTAACACATACAACCTCAGGATACAAGCATAGTTTACGAGAGGTTTTGGATGCTTCAAATGTCATGAATATGATAAAAGACACTAAAGCAGCTCAAGAGGTGCGAGCTCTAAAGGATTTCTTTACCATGCTCTCTAATGAGCCAGACCGTGCTTGTTATGGACCAAAACACGTGGAGGTTGCCCATGAACGAATGGCTATTCAAACGCTTCTCATTACTGATGATCTCTTCAGGAATAATGATATAACGGAGCGACAAAAATACGTCAATTTGGTCGATTCAGTCAAGGATTCAGGTGGCACCGTTCATATATTTTCATCCATGCACGTCTCTGGAGAGCAACTCGCTCAGATAACTGGAATTGCAGCAATCCTTCGATTTCCTCTGCCGGAACTCGAGGACATAGAGATGTAAATGCAATGAAGAAAGGTTATTTAATTTAGGGCCATGGGGGCCTGCAAGTAATAAGACAAGACACTCAATATCTCTGTATTCTTCTTAAACTGTAGATTGAATGAAGGGTGTGGTGTACCCTTAGATTATGTAAATCTTGTGTAACTTTACAAGTGTGTATGTTATATTTTGCCACAACTTTTACACTTATATAGAACTAAATATAAGGATTAATATCAATTAGAGAAAAACAGGAGAATTAATTAGATAATAGTGA

Coding sequence (CDS)

ATGAAGATCGTACGCAAACAGCTTGATCAGAATGGGTCTGGTAGTGTCAAGATGGTGCCACTTGATTCAGATGATCTATGGCATGCGTTCAATTTGATTGCTCCGGGAGACACTGTTATGGCTGTCACCGTTAGGAAAGTCATCAGAGAGATGGCTTCTGGAGGAAGAGATGCAGAACGAGTGAAACTCAAGCTAGAAATAAAAGTTGAGGAGGTGGCAGATTATGACAAAGTTGGATCTGTTTTGCGTATACGTGGAAAAAATATTCTGGAAAATGAGCATGTGAAGATAGGGGCTTACCATACTTTAGAACTTGAGCTGCATCGGCCATTTGTTTTGAGAAAGGATGTTTGGGACTCTTTTGCTCTAGATGTACTTCATCAAGCCTCTGATCCTGCTGCTAGTGCTGACTTGGCCGTGGTTTTAATGCAAGAAGGATTAGCACATGTTCTCCTTGTCGGAAAAAGTATGACAATTACTCGAGCTCGAATCGAAACTTCAATTCCTCGCAAGCATGGGTCAGCCATTGCTGGTTATGAGTCGGCCTTGAATAAATTCTTCGAGAATGTTTTACAGGCTTTCTTGAAGCATGTTGATTTTAAAGTGGTACGCTGTGCAGTGATAGCTAGTCCTGGATTTACCAAGGATCAGTTCCATCGGCACTTATTATTGGAAGCTGAAAGAAGACAGCTAAGACCTATTATCGAGAACAAATCCCGCATAATTCTAACACATACAACCTCAGGATACAAGCATAGTTTACGAGAGGTTTTGGATGCTTCAAATGTCATGAATATGATAAAAGACACTAAAGCAGCTCAAGAGGTGCGAGCTCTAAAGGATTTCTTTACCATGCTCTCTAATGAGCCAGACCGTGCTTGTTATGGACCAAAACACGTGGAGGTTGCCCATGAACGAATGGCTATTCAAACGCTTCTCATTACTGATGATCTCTTCAGGAATAATGATATAACGGAGCGACAAAAATACGTCAATTTGGTCGATTCAGTCAAGGATTCAGGTGGCACCGTTCATATATTTTCATCCATGCACGTCTCTGGAGAGCAACTCGCTCAGATAACTGGAATTGCAGCAATCCTTCGATTTCCTCTGCCGGAACTCGAGGACATAGAGATGTAA

Protein sequence

MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAERVKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDSFALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYESALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHVEVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQITGIAAILRFPLPELEDIEM

Homology

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BLAST of CmoCh05G008420 vs. ExPASy Swiss-Prot
Match: Q9ZT87 (Protein PELOTA 1 OS=Arabidopsis thaliana OX=3702 GN=PEL1 PE=2 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 1.9e-174
Identity = 312/379 (82.32%), Postives = 342/379 (90.24%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MKIVR+   +NG GSVKMV  DSDDLW+A+NLIA GD+VMAVT RKV RE+  GGRD+ER
Sbjct: 1   MKIVRRDFVRNGPGSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFRKVQREIPGGGRDSER 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           VKLKLE++VEEV DYDK GSVLRIRGKNILENEHVKIGA+HTLELEL RPFVLRK++WDS
Sbjct: 61  VKLKLEVQVEEV-DYDKDGSVLRIRGKNILENEHVKIGAFHTLELELKRPFVLRKEMWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
            ALD L QASDPAASADLAVVLMQEGLA + LVG+S+T +RARIETSIPRKHG AIAGYE
Sbjct: 121 MALDTLKQASDPAASADLAVVLMQEGLAQIFLVGRSVTSSRARIETSIPRKHGPAIAGYE 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
           SAL KFFENVLQAF+KHVDF VVRCAV+ASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
Sbjct: 181 SALKKFFENVLQAFVKHVDFSVVRCAVVASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
           IIL HT SGY+HSL EVL A NVMNMIKDTKAA+EV+AL DF  MLS EPDRACYGPKHV
Sbjct: 241 IILVHTNSGYRHSLGEVLHAPNVMNMIKDTKAAKEVKALNDFHNMLSTEPDRACYGPKHV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           EVA+ERMAIQTLLITD+LFRN+D+  R+KYVNLV+SVKDSGG   IFS+MHVSGEQLAQ+
Sbjct: 301 EVANERMAIQTLLITDELFRNSDVKTRKKYVNLVESVKDSGGDAFIFSAMHVSGEQLAQL 360

Query: 361 TGIAAILRFPLPELEDIEM 380
           TGIAA+LRFPLPELEDIEM
Sbjct: 361 TGIAALLRFPLPELEDIEM 378

[Close]

BLAST of CmoCh05G008420 vs. ExPASy Swiss-Prot
Match: Q9M2H7 (Protein PELOTA 2 OS=Arabidopsis thaliana OX=3702 GN=PEL2 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.4e-156
Identity = 290/400 (72.50%), Postives = 323/400 (80.75%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDA-- 60
           MKI+RK   +NG GSVKM+  DSDDLW+ +NLI P D+VMA+T RKV  E    GRD+  
Sbjct: 1   MKIIRKDFVRNGPGSVKMMAEDSDDLWYTYNLIGPEDSVMAITFRKVGGE----GRDSTP 60

Query: 61  -------------------ERVKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGA 120
                              ERVKLKLE++VEEV DYDK G V+RIRGKNI+ENEHV+IGA
Sbjct: 61  SLSRIESKYLGKKRSFTRTERVKLKLEVQVEEV-DYDKDGDVMRIRGKNIMENEHVRIGA 120

Query: 121 YHTLELELHRPFVLRKDVWDSFALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTI 180
           +HTLE+EL RPF+LRK+ WDS ALD L QASD AASADLAVVLMQEGLA + L GKS+  
Sbjct: 121 FHTLEIELKRPFLLRKENWDSLALDTLKQASDLAASADLAVVLMQEGLAQIFLAGKSVKS 180

Query: 181 TRARIETSIPRKHGSAIAGYESALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFH 240
             ARI+TSIP KHG+  AGYES L KFFENV+QAFLKHVDF VVRCAVIASPGFTKDQFH
Sbjct: 181 CGARIKTSIPWKHGAGTAGYESVLKKFFENVVQAFLKHVDFSVVRCAVIASPGFTKDQFH 240

Query: 241 RHLLLEAERRQLRPIIENKSRIILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRAL 300
           RHLLLEAERRQLRPI+ENKSR IL HT SGYKHSL EVL   NVMNMIKDTKAA+EV+AL
Sbjct: 241 RHLLLEAERRQLRPILENKSRFILVHTNSGYKHSLSEVLHDPNVMNMIKDTKAAKEVKAL 300

Query: 301 KDFFTMLSNEPDRACYGPKHVEVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKD 360
            DFFTM SN+P+RACYGPKHVEVAHERMAIQTLLI D LFRN+D+  R+KYV+ V+SVKD
Sbjct: 301 NDFFTMFSNDPNRACYGPKHVEVAHERMAIQTLLIIDGLFRNSDVKTRKKYVDFVESVKD 360

Query: 361 SGGTVHIFSSMHVSGEQLAQITGIAAILRFPLPELEDIEM 380
           SGG V IFSSMH SGEQLAQ TGIAAILRFPLP+LEDIEM
Sbjct: 361 SGGEVFIFSSMHASGEQLAQHTGIAAILRFPLPDLEDIEM 395

[Close]

BLAST of CmoCh05G008420 vs. ExPASy Swiss-Prot
Match: P48612 (Protein pelota OS=Drosophila melanogaster OX=7227 GN=pelo PE=1 SV=2)

HSP 1 Score: 413.3 bits (1061), Expect = 3.0e-114
Identity = 201/376 (53.46%), Postives = 282/376 (75.00%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MK++ K +D+   G+V +VP +S+D+WHA+NLIA GD+V + T+RKV  E A+G   + R
Sbjct: 1   MKLLGKYVDKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSR 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           V+  L I VE + D+D    VLR++G+NI EN++VK+GAYHTL+LEL+R F LRK  WD+
Sbjct: 61  VRTTLTIAVESI-DFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDT 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
            AL+ +  A DP  SAD+A V+MQEGLAHV L+  SMT+ R++IE SIPRK   ++  +E
Sbjct: 121 IALERIEMACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHE 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
             L KF+E V+Q+ L+HV+F VV+C +IASPGF +DQF+ ++  +A +   + +++NKS+
Sbjct: 181 KGLAKFYEQVMQSILRHVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSK 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
            +L H +SG+KHSLRE+L    V+  + DTKAA EV+AL+ F+ ML  EP +A YG KHV
Sbjct: 241 FMLVHASSGFKHSLREILQDPAVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
             A E  AI+TLLI+D+LFR  D++ R++YVNLV+S++D+GG V IFSSMH+SGEQLAQ+
Sbjct: 301 LQAAESQAIETLLISDNLFRCQDVSLRKEYVNLVESIRDAGGEVKIFSSMHISGEQLAQL 360

Query: 361 TGIAAILRFPLPELED 377
           TGIAA+LRFP+PELED
Sbjct: 361 TGIAALLRFPMPELED 375

[Close]

BLAST of CmoCh05G008420 vs. ExPASy Swiss-Prot
Match: Q80X73 (Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3)

HSP 1 Score: 397.5 bits (1020), Expect = 1.7e-109
Identity = 194/378 (51.32%), Postives = 276/378 (73.02%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MK+VRK ++++ +G V +VP + +D+WH FNL+  GD++ A T+RKV  E ++G   + R
Sbjct: 1   MKLVRKDIEKDNAGQVTLVPEEPEDMWHTFNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           V+  L + VE + D+D     LR++G NI ENE+VK+GAYHT+ELE +R F L K  WDS
Sbjct: 61  VRTTLTLCVEAI-DFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
             L+ + QA DPA SAD+A V+MQEGLAHV LV  SMT+TRA++E +IPRK     + ++
Sbjct: 121 VVLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHD 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
            AL +F+E V+QA  +H++F+VV+C ++ASPGF ++QF  ++  +A +   + ++EN+S+
Sbjct: 181 RALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSK 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
            +  H +SG+K+SL+E L    V + + DTKAA EV+AL DF+ ML +EPDRA YG K V
Sbjct: 241 FLQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           E A+E +AI TLLI+D+LFR+ D+  R +YV LVDSVK++ GTV IFSS+HVSGEQL Q+
Sbjct: 301 ERANEALAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLGQL 360

Query: 361 TGIAAILRFPLPELEDIE 379
           TG+AAILRFP+PEL D E
Sbjct: 361 TGVAAILRFPVPELSDQE 377

[Close]

BLAST of CmoCh05G008420 vs. ExPASy Swiss-Prot
Match: Q5XIP1 (Protein pelota homolog OS=Rattus norvegicus OX=10116 GN=Pelo PE=1 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.7e-109
Identity = 194/378 (51.32%), Postives = 277/378 (73.28%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MK+VRK ++++ +G V +VP + +D+WH +NL+  GD++ A T+RKV  E ++G   + R
Sbjct: 1   MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           V+  L + VE + D+D     LR++G NI ENE+VK+GAYHT+ELE +R F L K  WDS
Sbjct: 61  VRTTLTLCVEAI-DFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
             L+ + QA DPA SAD+A V+MQEGLAHV LV  SMT+TRA++E +IPRK     + ++
Sbjct: 121 VVLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHD 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
            AL +F+E V+QA  +H++F+VV+C ++ASPGF ++QF  ++  +A +   + ++EN+S+
Sbjct: 181 RALERFYEQVVQAIQRHINFEVVKCILVASPGFVREQFCDYMFQQAVKTDNKVLLENRSK 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
            +  H +SG+K+SL+EVL    V + + DTKAA EV+AL DF+ ML +EPDRA YG K V
Sbjct: 241 FLQVHASSGHKYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           E A+E +AI TLLI+D+LFR+ D+  R +YV LVDSVK++ GTV IFSS+HVSGEQL Q+
Sbjct: 301 ERANEALAIDTLLISDELFRHQDVATRSRYVRLVDSVKENAGTVRIFSSLHVSGEQLGQL 360

Query: 361 TGIAAILRFPLPELEDIE 379
           TG+AAILRFP+PEL D E
Sbjct: 361 TGVAAILRFPVPELSDQE 377

[Close]

BLAST of CmoCh05G008420 vs. ExPASy TrEMBL
Match: A0A6J1F3Y0 (Protein pelota homolog OS=Cucurbita moschata OX=3662 GN=LOC111439954 PE=3 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 6.0e-211
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER
Sbjct: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS
Sbjct: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
           FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE
Sbjct: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
           SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
Sbjct: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
           IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV
Sbjct: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI
Sbjct: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360

Query: 361 TGIAAILRFPLPELEDIEM 380
           TGIAAILRFPLPELEDIEM
Sbjct: 361 TGIAAILRFPLPELEDIEM 379

[Close]

BLAST of CmoCh05G008420 vs. ExPASy TrEMBL
Match: A0A6J1I8U3 (Protein pelota homolog OS=Cucurbita maxima OX=3661 GN=LOC111472547 PE=3 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 8.7e-210
Identity = 377/379 (99.47%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER
Sbjct: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS
Sbjct: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
           FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHG AIAGYE
Sbjct: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGPAIAGYE 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
           SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
Sbjct: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
           IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV
Sbjct: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           EVAHERMAIQTLLITDDLFRNND TERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI
Sbjct: 301 EVAHERMAIQTLLITDDLFRNNDTTERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360

Query: 361 TGIAAILRFPLPELEDIEM 380
           TGIAAILRFPLPELEDIEM
Sbjct: 361 TGIAAILRFPLPELEDIEM 379

[Close]

BLAST of CmoCh05G008420 vs. ExPASy TrEMBL
Match: A0A5D3DJJ6 (Protein pelota homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00050 PE=3 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 7.9e-203
Identity = 361/379 (95.25%), Postives = 374/379 (98.68%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MKIVRKQLD NG+GSVKMVP+DSDDLWHAFNLIAPGDTVMAVTVRKVI+E ASGGRDAER
Sbjct: 1   MKIVRKQLDPNGAGSVKMVPVDSDDLWHAFNLIAPGDTVMAVTVRKVIKEKASGGRDAER 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           VKLKLEIKVEEVADYDKVGS+LRIRGKNILENEHVKIGAYHTLELEL+RPFVLRKDVWDS
Sbjct: 61  VKLKLEIKVEEVADYDKVGSILRIRGKNILENEHVKIGAYHTLELELNRPFVLRKDVWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
           FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHG AIAGYE
Sbjct: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGPAIAGYE 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
           SALNKFF+NVLQAFLK+VDF VVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
Sbjct: 181 SALNKFFDNVLQAFLKYVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
           I+L HTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFF+MLSN+PDRACYGPKHV
Sbjct: 241 IVLVHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFSMLSNDPDRACYGPKHV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           EVAHER+AIQTLLITDDLFRNNDITERQKYVNLVDSV+DSGGTVHIFSSMHVSGEQLAQI
Sbjct: 301 EVAHERLAIQTLLITDDLFRNNDITERQKYVNLVDSVRDSGGTVHIFSSMHVSGEQLAQI 360

Query: 361 TGIAAILRFPLPELEDIEM 380
           TGIAAILRFPLP+LEDIEM
Sbjct: 361 TGIAAILRFPLPDLEDIEM 379

[Close]

BLAST of CmoCh05G008420 vs. ExPASy TrEMBL
Match: A0A1S3B4U3 (Protein pelota homolog OS=Cucumis melo OX=3656 GN=LOC103485822 PE=3 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 7.9e-203
Identity = 361/379 (95.25%), Postives = 374/379 (98.68%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MKIVRKQLD NG+GSVKMVP+DSDDLWHAFNLIAPGDTVMAVTVRKVI+E ASGGRDAER
Sbjct: 1   MKIVRKQLDPNGAGSVKMVPVDSDDLWHAFNLIAPGDTVMAVTVRKVIKEKASGGRDAER 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           VKLKLEIKVEEVADYDKVGS+LRIRGKNILENEHVKIGAYHTLELEL+RPFVLRKDVWDS
Sbjct: 61  VKLKLEIKVEEVADYDKVGSILRIRGKNILENEHVKIGAYHTLELELNRPFVLRKDVWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
           FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHG AIAGYE
Sbjct: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGPAIAGYE 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
           SALNKFF+NVLQAFLK+VDF VVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
Sbjct: 181 SALNKFFDNVLQAFLKYVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
           I+L HTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFF+MLSN+PDRACYGPKHV
Sbjct: 241 IVLVHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFSMLSNDPDRACYGPKHV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           EVAHER+AIQTLLITDDLFRNNDITERQKYVNLVDSV+DSGGTVHIFSSMHVSGEQLAQI
Sbjct: 301 EVAHERLAIQTLLITDDLFRNNDITERQKYVNLVDSVRDSGGTVHIFSSMHVSGEQLAQI 360

Query: 361 TGIAAILRFPLPELEDIEM 380
           TGIAAILRFPLP+LEDIEM
Sbjct: 361 TGIAAILRFPLPDLEDIEM 379

[Close]

BLAST of CmoCh05G008420 vs. ExPASy TrEMBL
Match: A0A0A0LHC6 (Protein pelota homolog OS=Cucumis sativus OX=3659 GN=Csa_2G093820 PE=3 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 2.3e-202
Identity = 360/379 (94.99%), Postives = 373/379 (98.42%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MKIVRKQLD NG GSVKMVP+DSDDLWHAFNLIAPGDTVMAVTVRKVI+E ASGGRDAER
Sbjct: 1   MKIVRKQLDPNGPGSVKMVPIDSDDLWHAFNLIAPGDTVMAVTVRKVIKEKASGGRDAER 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           VKLKLEIKVEEVADYDKVGS+LRIRGKNILENEHVKIGAYHTLELEL+RPFVLRKDVWDS
Sbjct: 61  VKLKLEIKVEEVADYDKVGSILRIRGKNILENEHVKIGAYHTLELELNRPFVLRKDVWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
           FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHG AIAGYE
Sbjct: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGPAIAGYE 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
           SALNKFF+NVLQAFLK+VDF VVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
Sbjct: 181 SALNKFFDNVLQAFLKYVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
           I+L HTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFF+MLSN+PDRACYGPKHV
Sbjct: 241 IVLVHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFSMLSNDPDRACYGPKHV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           EVAHER+AIQTLLITDDLFRNNDIT+RQKYVNLVDSV+DSGGTVHIFSSMHVSGEQLAQI
Sbjct: 301 EVAHERLAIQTLLITDDLFRNNDITQRQKYVNLVDSVRDSGGTVHIFSSMHVSGEQLAQI 360

Query: 361 TGIAAILRFPLPELEDIEM 380
           TGIAAILRFPLP+LEDIEM
Sbjct: 361 TGIAAILRFPLPDLEDIEM 379

[Close]

BLAST of CmoCh05G008420 vs. TAIR 10
Match: AT4G27650.1 (Eukaryotic release factor 1 (eRF1) family protein )

HSP 1 Score: 613.2 bits (1580), Expect = 1.4e-175
Identity = 312/379 (82.32%), Postives = 342/379 (90.24%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDAER 60
           MKIVR+   +NG GSVKMV  DSDDLW+A+NLIA GD+VMAVT RKV RE+  GGRD+ER
Sbjct: 1   MKIVRRDFVRNGPGSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFRKVQREIPGGGRDSER 60

Query: 61  VKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGAYHTLELELHRPFVLRKDVWDS 120
           VKLKLE++VEEV DYDK GSVLRIRGKNILENEHVKIGA+HTLELEL RPFVLRK++WDS
Sbjct: 61  VKLKLEVQVEEV-DYDKDGSVLRIRGKNILENEHVKIGAFHTLELELKRPFVLRKEMWDS 120

Query: 121 FALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGSAIAGYE 180
            ALD L QASDPAASADLAVVLMQEGLA + LVG+S+T +RARIETSIPRKHG AIAGYE
Sbjct: 121 MALDTLKQASDPAASADLAVVLMQEGLAQIFLVGRSVTSSRARIETSIPRKHGPAIAGYE 180

Query: 181 SALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240
           SAL KFFENVLQAF+KHVDF VVRCAV+ASPGFTKDQFHRHLLLEAERRQLRPIIENKSR
Sbjct: 181 SALKKFFENVLQAFVKHVDFSVVRCAVVASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 240

Query: 241 IILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRALKDFFTMLSNEPDRACYGPKHV 300
           IIL HT SGY+HSL EVL A NVMNMIKDTKAA+EV+AL DF  MLS EPDRACYGPKHV
Sbjct: 241 IILVHTNSGYRHSLGEVLHAPNVMNMIKDTKAAKEVKALNDFHNMLSTEPDRACYGPKHV 300

Query: 301 EVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKDSGGTVHIFSSMHVSGEQLAQI 360
           EVA+ERMAIQTLLITD+LFRN+D+  R+KYVNLV+SVKDSGG   IFS+MHVSGEQLAQ+
Sbjct: 301 EVANERMAIQTLLITDELFRNSDVKTRKKYVNLVESVKDSGGDAFIFSAMHVSGEQLAQL 360

Query: 361 TGIAAILRFPLPELEDIEM 380
           TGIAA+LRFPLPELEDIEM
Sbjct: 361 TGIAALLRFPLPELEDIEM 378

[Close]

BLAST of CmoCh05G008420 vs. TAIR 10
Match: AT3G58390.1 (Eukaryotic release factor 1 (eRF1) family protein )

HSP 1 Score: 553.9 bits (1426), Expect = 1.0e-157
Identity = 290/400 (72.50%), Postives = 323/400 (80.75%), Query Frame = 0


Query: 1   MKIVRKQLDQNGSGSVKMVPLDSDDLWHAFNLIAPGDTVMAVTVRKVIREMASGGRDA-- 60
           MKI+RK   +NG GSVKM+  DSDDLW+ +NLI P D+VMA+T RKV  E    GRD+  
Sbjct: 1   MKIIRKDFVRNGPGSVKMMAEDSDDLWYTYNLIGPEDSVMAITFRKVGGE----GRDSTP 60

Query: 61  -------------------ERVKLKLEIKVEEVADYDKVGSVLRIRGKNILENEHVKIGA 120
                              ERVKLKLE++VEEV DYDK G V+RIRGKNI+ENEHV+IGA
Sbjct: 61  SLSRIESKYLGKKRSFTRTERVKLKLEVQVEEV-DYDKDGDVMRIRGKNIMENEHVRIGA 120

Query: 121 YHTLELELHRPFVLRKDVWDSFALDVLHQASDPAASADLAVVLMQEGLAHVLLVGKSMTI 180
           +HTLE+EL RPF+LRK+ WDS ALD L QASD AASADLAVVLMQEGLA + L GKS+  
Sbjct: 121 FHTLEIELKRPFLLRKENWDSLALDTLKQASDLAASADLAVVLMQEGLAQIFLAGKSVKS 180

Query: 181 TRARIETSIPRKHGSAIAGYESALNKFFENVLQAFLKHVDFKVVRCAVIASPGFTKDQFH 240
             ARI+TSIP KHG+  AGYES L KFFENV+QAFLKHVDF VVRCAVIASPGFTKDQFH
Sbjct: 181 CGARIKTSIPWKHGAGTAGYESVLKKFFENVVQAFLKHVDFSVVRCAVIASPGFTKDQFH 240

Query: 241 RHLLLEAERRQLRPIIENKSRIILTHTTSGYKHSLREVLDASNVMNMIKDTKAAQEVRAL 300
           RHLLLEAERRQLRPI+ENKSR IL HT SGYKHSL EVL   NVMNMIKDTKAA+EV+AL
Sbjct: 241 RHLLLEAERRQLRPILENKSRFILVHTNSGYKHSLSEVLHDPNVMNMIKDTKAAKEVKAL 300

Query: 301 KDFFTMLSNEPDRACYGPKHVEVAHERMAIQTLLITDDLFRNNDITERQKYVNLVDSVKD 360
            DFFTM SN+P+RACYGPKHVEVAHERMAIQTLLI D LFRN+D+  R+KYV+ V+SVKD
Sbjct: 301 NDFFTMFSNDPNRACYGPKHVEVAHERMAIQTLLIIDGLFRNSDVKTRKKYVDFVESVKD 360

Query: 361 SGGTVHIFSSMHVSGEQLAQITGIAAILRFPLPELEDIEM 380
           SGG V IFSSMH SGEQLAQ TGIAAILRFPLP+LEDIEM
Sbjct: 361 SGGEVFIFSSMHASGEQLAQHTGIAAILRFPLPDLEDIEM 395

The following BLAST results are available for this feature:

BLAST of CmoCh05G008420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT87	1.9e-174	82.32	Protein PELOTA 1 OS=Arabidopsis thaliana OX=3702 GN=PEL1 PE=2 SV=1	[more]
Q9M2H7	1.4e-156	72.50	Protein PELOTA 2 OS=Arabidopsis thaliana OX=3702 GN=PEL2 PE=3 SV=1	[more]
P48612	3.0e-114	53.46	Protein pelota OS=Drosophila melanogaster OX=7227 GN=pelo PE=1 SV=2	[more]
Q80X73	1.7e-109	51.32	Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3	[more]
Q5XIP1	1.7e-109	51.32	Protein pelota homolog OS=Rattus norvegicus OX=10116 GN=Pelo PE=1 SV=1	[more]

BLAST of CmoCh05G008420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3Y0	6.0e-211	100.00	Protein pelota homolog OS=Cucurbita moschata OX=3662 GN=LOC111439954 PE=3 SV=1	[more]
A0A6J1I8U3	8.7e-210	99.47	Protein pelota homolog OS=Cucurbita maxima OX=3661 GN=LOC111472547 PE=3 SV=1	[more]
A0A5D3DJJ6	7.9e-203	95.25	Protein pelota homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3B4U3	7.9e-203	95.25	Protein pelota homolog OS=Cucumis melo OX=3656 GN=LOC103485822 PE=3 SV=1	[more]
A0A0A0LHC6	2.3e-202	94.99	Protein pelota homolog OS=Cucumis sativus OX=3659 GN=Csa_2G093820 PE=3 SV=1	[more]

BLAST of CmoCh05G008420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27650.1	1.4e-175	82.32	Eukaryotic release factor 1 (eRF1) family protein	[more]
AT3G58390.1	1.0e-157	72.50	Eukaryotic release factor 1 (eRF1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005140	eRF1 domain 1/Pelota-like	SMART	SM01194	eRF1_1_2	coord: 1..131 e-value: 2.2E-49 score: 180.1
IPR005140	eRF1 domain 1/Pelota-like	PFAM	PF03463	eRF1_1	coord: 1..129 e-value: 1.2E-49 score: 167.6
IPR005142	eRF1 domain 3	PFAM	PF03465	eRF1_3	coord: 273..371 e-value: 1.3E-26 score: 93.3
IPR038069	Pelota/DOM34, N-terminal domain	GENE3D	2.30.30.870	Pelota, domain A	coord: 1..133 e-value: 5.0E-44 score: 151.3
IPR038069	Pelota/DOM34, N-terminal domain	SUPERFAMILY	159065	Dom34/Pelota N-terminal domain-like	coord: 1..130
IPR004405	Translation release factor pelota	TIGRFAM	TIGR00111	TIGR00111	coord: 1..371 e-value: 4.0E-73 score: 244.7
IPR004405	Translation release factor pelota	PANTHER	PTHR10853	PELOTA	coord: 1..379
IPR005141	eRF1 domain 2	PFAM	PF03464	eRF1_2	coord: 138..269 e-value: 5.8E-30 score: 104.3
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 271..379 e-value: 3.4E-42 score: 145.2
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 265..371
IPR042226	eRF1, domain 2 superfamily	GENE3D	3.30.420.60	eRF1 domain 2	coord: 137..270 e-value: 1.7E-50 score: 172.7
None	No IPR available	PANTHER	PTHR10853:SF5	PROTEIN PELOTA HOMOLOG	coord: 1..379
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 134..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G008420.1	CmoCh05G008420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070966	nuclear-transcribed mRNA catabolic process, no-go decay
biological_process	GO:0070481	nuclear-transcribed mRNA catabolic process, non-stop decay
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0071025	RNA surveillance
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0046872	metal ion binding