CmoCh05G008300 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh05G008300
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionATP synthase subunit alpha, chloroplastic
LocationCmo_Chr05: 5060593 .. 5065528 (+)
RNA-Seq ExpressionCmoCh05G008300
SyntenyCmoCh05G008300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTTTCATGGTTAATGTTAGGTTCTTAGGATTGCTCAACAACGAACACCCAAGAAGACCGCCCGGCCGTTAAGCTTATTCGGGAGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGGCACTAAATCAAGTTCTGCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACTCAGTCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATTTGCGGATCTATTCAATGTTGGAATCAAACCTGCTATTAATGTGGGTATTTCCGTCTCCAAAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAATAGCCAACAAATCAAAATTGGAATTGGCTCAATTTGTCGAATTAGAAGCCTTTGCGCAATTCGCTTATGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACATGAGTTGCTCAAACAATCTCAATCATCCCCTCTCATGGTAGAAGAACAGATAATGACTATTTATACCGGAACGAATGATTATCTTGATTCATTAGAAATTGAACAAGTAAGAAAATTTCTCGTTGAGTTACGTACTTACGTAAAAACGAATGATCAAGATGAATACAAAGAACAGGAGCGAGAAAATACAATAAAGAATATTCGCTAAAGGTTTTATTATTGATGACTTCAGGTACGTAGAATAAGATAGAATACGAACGAAGAAAAGTACAGTTTGAGAGCACCGTTAATATATATGGTTTCAATTTACTAAATATAGCTTCCAAAGATTTAAACCTACTCGATATAATCAAATAAATATATCTCTATCAAATCTTTACCAAATATCTATCATATCTTTACTAAATTTGTTTCAAATATATCTAGGCATCAGACTCCATATCCCAACAATCTCACACTTTGAGACTGATCAACCCCAACAATCTCCCAATTAGAGACTGGTCCAGTCAACCCCAACAATCTCCACTAATCCAGTCAACCAAGAATTTCATTCTAAATAGGTACCATACCACTTGAGGCTTTGCACAACCTCAATGTTCCAACGTCAACACAAAATGTTTGCTGGATCTCTTGCCCCCTCTATCTTCTCCAAACACATCACCATCTTCCACAAACCTCTGAGTGAAATGTTATCGCCTTATGTGTTTTGAATTTCAATGATAAACCAGGTTCCTCGCCAACTGCATGACACTTTAACTATCTATCTGAAGAATCTTTTCACGCTGCTTCTTGCCTAATTCTTCTAGATAGTCCGTCATCCATATCATCTCCTTTCCATCTTCAGCTATTGCCACGTACTCAGCCTCAACAGATGAAAGAGCAACACATTTCTGAAGCCTAAACATTCCATCATCCATGGCTTGCTCCCACTTAGTTGTATCCTCCAACTGTAGGTCCTCATCAAGGGGCTTTCGTTCCACTTCATCAGTCACCAACCAATAGTGTAAAGAAGACTCTGAATGATACTCAAGAATTAGGCAAGAACATCACTAGGTGAATCTTTCAGCAACTCAACCTCAACCTCAACTCCAACTTGCTTCACCTCTGGTTTCTCAACAAGAGTCTCATAAGTTTTTTGAGTATCTGCTACAACATCACTATGTGAATCTTTCAGCAACTCAACCTCAACTCCCACTTGCTTCACCTCTGGTTTCTCAGCAACAGTCTTAGGAGTTTCTTGAGTATCCACTACAACATCATTATGTGAATTGTTCTGCAACTCAACCTCAACTCCCACTTGCTTCGTTGTCCCGGTATCTTTCTTCAATTCTCTGGTAGTCTTTGTGAAGCTAACTCGCTTTTGTTTGCTCATAACGCAGTTCTCATAAGAACTCATATCAACAGATTTCAGACCTTCTAAAACTCCTCCCGCAGCCAACATCTTCATTCCTTTAACGCTCATATGTCCAAGTCTATTGTGCCATATACTTGAATTTGAAGCACTCTCAGCAACAACAACTCTGTTCATACACCCTCCAGCAGTGTATAAAGTTCTAGATTTTGTGCCACGTGCTACCACCATAGCACCCTTCACAATCTTCCACGAAATCTTACCAAACTTTGTTGCATAACCTGTGCTATCCAACTAACCAATAGAGATCAGGTTTTTCTTGAGACTAGAAATATATCTGACATCTTTTAATGTCTACTGATTTCCTACTGGAGTTTTTTATGCAGACATCCCATTTTCCTTCAATTTTCAAATCTTTGTTGTCGACAAGATACACTTTCTCGAAATTTCCAGACTTAAAATTTTGACATAGCTCTTTATTTGGAGACGAATGAAAAGATGCACTTGAATCCAAAATCCAGGATTCAATCGGACTGTCCACACTAAGGATTAGAGCATCCCCAATGTCTTCTGCTGAATTTACCGAATCATCATCATCCTCTGATTTGTGATACTGCTTCCTCTTTGATCGTTTACCATCTATTTGAAAGTGACCTTTTCCTCCACAACTCCAACACTTCACATTTGGTTTGTTTGGAGATTTTCCTCAGTTTCTTGATTTTGATCGCCCATTGTTTGGGTCCTTTGATTTACTCCTTCCCCTTCGAACAACACTGAGAGCATTGCCTAAATCTCTGATTTCTTGTTTGCGAATACTTTCGCTAAGAACTACATCTCGAATTTCATCGAACTTCAGCTTATTAGATCCTCGTGAACTGCTGATCGCGGCAACAACAGTATCTCACGACTCAGGTAAAGATGACATCAAAATCAATGCCTTAATTTCATTTTCGAAATTAATATCTACCGAACTTAGTTGACTTACAATCACATTGAATTCATTTATATGACCAGCAACAGATCCACCTTTAGACATTTGTAAATTAAATAGTCTCTGCATTAAATACACCTTGTTCATAGCCGACGGTTTCTCGTACATATTCAACAACGCCTTCAACAGATCTGACGTTGTCTTCTCCTTGATGATGTTGAACGTCACTTTTCTAGACAGCTTCAATCAGATCAACCCTAAGGTCTGACGATCCTTGAGCTTTCACTGCTCCATGGTCATACTATCCGGCTTCACCCCCAACAGGGGTTCTTGAAGACCTTTCTCCATCTTCACAGACCAGGGTGAGAATTTCGCCTCCCTCTGATACCAATTGTTAGCTCTAATCCCAAGGTTTACACAAATACCAGGAGAGAGAAAATACAATGAGGAATATTTGTTAAAGGTTTTATTATTGATGACTTAGGGATGATAACAAAAAAAAAAGAGTATATATATAGTTTCAATTTACTAAAGATAGCTTTCCAAAGATTTAAACTAATATAATCTAACAAATATCTCTCTATCCAATCTCTACCAAATATCTACCATATATATCTTTCAGATTTTTACGAAATATCAAATGTGTCGATCTAGGCATCAGGCTCCATATCCCAACAGTTAAAACATACATTATAGGTAAAATTGGATTCATACGATCGTTCGAAAAAGAAAGAAGAAACTGAGACAAGACTAAAGCAAAACGAGCCCAATATTACATAGGCCCTGTCGTGCCATTACCTTAGGTATTTTTCTACTTAATATTTTCTTGAAGATAACTTTTTTTTAGTTCAATTTAAGTGATTGAAAAGTGTTGAAATCGTTATTCTAGTTTCTACACTATGAAATCTTCAAAATTATTAAAACTAATCGAAAATCGAACTTAAAAATGTTTTAAAAAATGGCTCAAAATAGTGTCAGGTCACAAACTTAGTTTAGTTATGTCGTCGAGAGCTGGTTCACTTTAACCGCAGATATCATCCTTCTTTATCTTCTAGACAATAGGGCACAAGCATGGTCTTCTCCTTCGATGGTCTGGTTTTGAGCTTTTGTGGTCGAGTTGGTTTCTTCATTGAACTTCTAAATCTCCTTATTACGAACATTTGATAAAAAAAAAATTTATATATTTTCATCTAGAATCGAAGAGGAATTTAGGACATTAGTATCCTTATTTTCAGGCTAAATCAAATATACCTCAACTTGAATTCATGTCCTTTCTTGAGACGTACTCAACCTTCGATTCCTTCACGAACATCGATCTCATTACTTCCACGAAACTATAGGAAAAGGATTTATTCAAAGCTATAAGGTATATGAAGAGAAAATGACTTCCAAAGAATTTGATTCAAAACTTAATTTCTTAAAGAAATACTTAAATGCAATTCATATTTAGATACGATAAGATCTCACATCAATCAATTAGAGAGACGAACGAAATATTTTTTATAAGGGTGCGAAAACCTATCACTAACAAACGCATTTTAAAAACCTTGAAGAAAAGTTAAAAAGAATACAATATCAGCTAACCATTACCGATACATAAAAGAAATTTGAACTTAAAAATAACCACAAACAAGTTTTATTTTTGGGAATGATGATCAATAATACTTCTACTAAATTAGAGTATCCAAGTGTTGATGGATGTTACCATATGATACCATAAAGGCAAGACTTTTAATATCCAAATTCTTGAGTTGGTGCATGCAAGAACTAACAGCTACAAATATGAGTTTTGGTTGTTCCTTCTCACAAAGAATCAATCCAAAGATCCATTTCTGATACCCAATCATCCCAAAGCTCCCTCTTGTTGCACCCATCTCCATCTGCCATTGCTACCACTTCTTGATCAAATTGGTAGTCCATTTGGATATTCTCCATGCGGATGCTACCACTTTGTTCAATAATTGGTACGTTTTGGTTCTGATTTTGTATCAATATTCCTTGCTTCTCTCCATTTTGATCCTCAACATATTCTTTTTCTTTTGATTTGCTGCTTTCTTCTTGAATAGGCTTCCACTTTGTGGAATTTGGCTTCTGATCACCTCCTTGATGACCATTCACCTTCTTGCTCAAATGGCAATTCCAATAGTTCTTGATGTCGTTTGCTGTTCTTCCCGGTAA

mRNA sequence

ATGAAAATTTTCATGGATTGCTCAACAACGAACACCCAAGAAGACCGCCCGGCCGTTAAGCTTATTCGGGAGATAGGCACTAAATCAAGTTCTGCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACTCAGTCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATTTGCGGATCTATTCAATGTTGGAATCAAACCTGCTATTAATGTGGGTATTTCCGTCTCCAAAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAATAGCCAACAAATCAAAATTGGAATTGGCTCAATTTGTCGAATTAGAAGCCTTTGCGCAATTCGCTTATGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACATGAGTTGCTCAAACAATCTCAATCATCCCCTCTCATGGCTAAATCAAATATACCTCAACTTGAATTCATGTCCTTTCTTGAGACGCTTCCACTTTGTGGAATTTGGCTTCTGATCACCTCCTTGATGACCATTCACCTTCTTGCTCAAATGGCAATTCCAATAGTTCTTGATGTCGTTTGCTGTTCTTCCCGGTAA

Coding sequence (CDS)

ATGAAAATTTTCATGGATTGCTCAACAACGAACACCCAAGAAGACCGCCCGGCCGTTAAGCTTATTCGGGAGATAGGCACTAAATCAAGTTCTGCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACTCAGTCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATTTGCGGATCTATTCAATGTTGGAATCAAACCTGCTATTAATGTGGGTATTTCCGTCTCCAAAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAATAGCCAACAAATCAAAATTGGAATTGGCTCAATTTGTCGAATTAGAAGCCTTTGCGCAATTCGCTTATGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACATGAGTTGCTCAAACAATCTCAATCATCCCCTCTCATGGCTAAATCAAATATACCTCAACTTGAATTCATGTCCTTTCTTGAGACGCTTCCACTTTGTGGAATTTGGCTTCTGATCACCTCCTTGATGACCATTCACCTTCTTGCTCAAATGGCAATTCCAATAGTTCTTGATGTCGTTTGCTGTTCTTCCCGGTAA

Protein sequence

MKIFMDCSTTNTQEDRPAVKLIREIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAINVGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHELLKQSQSSPLMAKSNIPQLEFMSFLETLPLCGIWLLITSLMTIHLLAQMAIPIVLDVVCCSSR
Homology
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BLAST of CmoCh05G008300 vs. ExPASy Swiss-Prot
Match: A6MM21 (ATP synthase subunit alpha, chloroplastic OS=Buxus microphylla OX=153571 GN=atpA PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.4e-54
Identity = 117/136 (86.03%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy Swiss-Prot
Match: Q0G9N4 (ATP synthase subunit alpha, chloroplastic OS=Liriodendron tulipifera OX=3415 GN=atpA PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.4e-54
Identity = 117/136 (86.03%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSTPLTVEDQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy Swiss-Prot
Match: A6MMJ2 (ATP synthase subunit alpha, chloroplastic OS=Dioscorea elephantipes OX=145284 GN=atpA PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.2e-54
Identity = 117/136 (86.03%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS PL  +  I
Sbjct: 420 LLKQSQSDPLAVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy Swiss-Prot
Match: A0ZZ20 (ATP synthase subunit alpha, chloroplastic OS=Gossypium barbadense OX=3634 GN=atpA PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-54
Identity = 117/136 (86.03%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL     I
Sbjct: 420 LLKQSQSAPLTVAEQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy Swiss-Prot
Match: Q2L8Z1 (ATP synthase subunit alpha, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpA PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-54
Identity = 117/136 (86.03%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL     I
Sbjct: 420 LLKQSQSAPLTVAEQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy TrEMBL
Match: A0A2H4T1V9 (ATP synthase subunit alpha, chloroplastic OS=Cucurbita maxima OX=3661 GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 6.2e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy TrEMBL
Match: A0A0S2IHQ9 (ATP synthase subunit alpha OS=Cucurbita pedatifolia OX=37647 GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 6.2e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy TrEMBL
Match: A0A0S2IEV4 (ATP synthase subunit alpha OS=Cucurbita ficifolia OX=37645 GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 6.2e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy TrEMBL
Match: A0A0S2IEU2 (ATP synthase subunit alpha OS=Cucurbita digitata OX=200225 GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 6.2e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. ExPASy TrEMBL
Match: A0A0S2IF17 (ATP synthase subunit alpha OS=Cucurbita maxima subsp. andreana OX=61888 GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 6.2e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 206.5 bits (524), Expect = 2.1e-53
Identity = 113/136 (83.09%), Postives = 120/136 (88.24%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   K SS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A K KLELAQF ELEAF+QF+ DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFSQFSSDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   K S   G GS+TALP++ETQ+GDVSAYIPTNVISITDGQI L  +LF  GI+PAIN
Sbjct: 580 ERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAIN 639

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VG+SVS+VGSAAQ+KAMKQ+   SKLELAQ+ E+ AFAQF  DLD ATQ  L RG RL E
Sbjct: 640 VGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTE 699

Query: 144 LLKQSQSSPLMAKSNI 160
           + KQ Q +PL  +  I
Sbjct: 700 VPKQPQYAPLPIEKQI 715

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BLAST of CmoCh05G008300 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 0 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   K S   G GS+TALP++ETQ+GDVSAYIPTNVISITDGQI L  +LF  GI+PAIN
Sbjct: 310 ERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAIN 369

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VG+SVS+VGSAAQ+KAMKQ+   SKLELAQ+ E+ AFAQF  DLD ATQ  L RG RL E
Sbjct: 370 VGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTE 429

Query: 144 LLKQSQSSPLMAKSNI 160
           + KQ Q +PL  +  I
Sbjct: 430 VPKQPQYAPLPIEKQI 445

The following BLAST results are available for this feature:
BLAST of CmoCh05G008300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A6MM212.4e-5486.03ATP synthase subunit alpha, chloroplastic OS=Buxus microphylla OX=153571 GN=atpA... [more]
Q0G9N42.4e-5486.03ATP synthase subunit alpha, chloroplastic OS=Liriodendron tulipifera OX=3415 GN=... [more]
A6MMJ23.2e-5486.03ATP synthase subunit alpha, chloroplastic OS=Dioscorea elephantipes OX=145284 GN... [more]
A0ZZ204.2e-5486.03ATP synthase subunit alpha, chloroplastic OS=Gossypium barbadense OX=3634 GN=atp... [more]
Q2L8Z14.2e-5486.03ATP synthase subunit alpha, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpA ... [more]
BLAST of CmoCh05G008300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2H4T1V96.2e-5388.24ATP synthase subunit alpha, chloroplastic OS=Cucurbita maxima OX=3661 GN=atpA PE... [more]
A0A0S2IHQ96.2e-5388.24ATP synthase subunit alpha OS=Cucurbita pedatifolia OX=37647 GN=atpA PE=3 SV=1[more]
A0A0S2IEV46.2e-5388.24ATP synthase subunit alpha OS=Cucurbita ficifolia OX=37645 GN=atpA PE=3 SV=1[more]
A0A0S2IEU26.2e-5388.24ATP synthase subunit alpha OS=Cucurbita digitata OX=200225 GN=atpA PE=3 SV=1[more]
A0A0S2IF176.2e-5388.24ATP synthase subunit alpha OS=Cucurbita maxima subsp. andreana OX=61888 GN=atpA ... [more]
BLAST of CmoCh05G008300 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00120.12.1e-5383.09ATP synthase subunit alpha [more]
AT2G07698.11.5e-3864.71ATPase, F1 complex, alpha subunit protein [more]
ATMG01190.11.5e-3864.71ATP synthase subunit 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 34..89
e-value: 6.9E-15
score: 55.3
IPR038376ATP synthase, alpha subunit, C-terminal domain superfamilyGENE3D1.20.150.20coord: 97..166
e-value: 3.3E-25
score: 90.5
IPR000793ATP synthase, alpha subunit, C-terminalPFAMPF00306ATP-synt_ab_Ccoord: 96..162
e-value: 7.7E-25
score: 87.7
IPR000793ATP synthase, alpha subunit, C-terminalCDDcd18113ATP-synt_F1_alpha_Ccoord: 100..153
e-value: 1.9733E-27
score: 98.9774
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 16..96
e-value: 6.0E-24
score: 86.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..95
NoneNo IPR availablePANTHERPTHR48082ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIALcoord: 24..159
NoneNo IPR availablePANTHERPTHR48082:SF6ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTICcoord: 24..159
NoneNo IPR availableSUPERFAMILY47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 97..163
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active sitePROSITEPS00152ATPASE_ALPHA_BETAcoord: 80..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G008300.1CmoCh05G008300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism