CmoCh05G007880 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G007880
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	sister chromatid cohesion 1 protein 4-like isoform X1
Location	Cmo_Chr05: 4539847 .. 4548070 (-)
RNA-Seq Expression	CmoCh05G007880
Synteny	CmoCh05G007880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTATTCTCAATTCATATTGGCCAAGAAAGGGCCGCTTGGGACAATATGGATAGCGGCTCATTTGGAGAGGAAGCTGCGGAAGAATCAAGTGGCGGACACTGATATCGGGGTCTCTGTTGGTTAGTATTTCTTCACTCTATGTTCTTGGTTCTTCATTTCCCCCTTTTCTTCTTAGACAAATCAAAGCTAGAACGTTTCATAAGTGTAGATTATCTTCTCATGCATTGGGAATTTTTTGATTGATTCGTGTTAAGAGCTGATTGAAATTTGTGGGAGTTCATGCGTTTCTTGAGTACTATGCTCTTTCTATATGTAAGGACGTTAATCTTTTGATAAATAGAGGTTTTTGTAATATGGTGGAAGATCCTACGTTGTTTGGAGAGGGGAACGAAGCATTTCTTATAAGTGTGTGACAATTTCTACTTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAACCCGAAAGGGAAAGCCCAAAAAGGACAATATCTACTAGCGGTATGCTTGAGCTGTTATAAATGGTATCAGAGCCAGACATTGAGCGGTGTGTCAGTGAGGACGCTAGGCCCCCAAGGGGGGTGGATTGTAAGATACCAAGTTGGTTGGAGAGGGGAACGAAGCATTCCTTGTAAGGGTGTGGAAATCTCTCCTTAGTAGACACGCTTTAAAAACTTTGTGCGGAAGTCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGTGGTGGGCTTGAGCGCTTACAAATGGTATCGGAGCTAGACACTGGGCGGTGTGCCAGCTAGGATACTGGGCCCTCAAGGGGGTGGATTGTAAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGAGTACGGAAACCTCTCCCTAGCATACGTGTTTTAAAAACCTAGAGGAGAAATCTGAAAGGGAAAGCCCAAAGAGGATAATATTTGCTAGCGGTGAGCTTGGGCTGATTCTGTCTAAATGAAATTATTGTTGGTTATGAAAATTATATTTTATGATATTATGGTTCCATAGATGCATTTTTTGGTTTATTGATTGCGCTTCCCTAGTAGAGGAACTAGGAAGTTACTTATTTATTCAAGTTTTCGAAACAGATTCGATTCTTTTCCCCGACGTGCCAATTGCACTGCGATTGTCCAGCCATCTTCTCCTTGGGGTGGTGAGGATATATTCTAGAAAGGTGGGTTACCTATTTGACGATTGTAGTGAAGCTCTGCTTAAGATAAAGCAAGCATTCCGTTCTACTGCTGTCGATTTACCACCTGAAGAATCTACTGCTCCATATCATTCTATCACTTTGCCCGAAACTTTTGATCTCGATGATTTTGAGCTTCCGGACAACGAACTTTATCAGGGGTTAGTTAAAGGGTTTTCAGTTCTGTTTATAATGAACCTGCGGCAATAGCAACAAAGCCGTGTTGTAGCGTTTTCCCCTCAGTGAATGACCTCTAATTTTGCTGCAGTAATTATGTTGATCATCACGTTAGTTCTCGGGAGCAAATCACCCTTCAAGATACTATGGAGGGTGTAGTCTACACCACTTCTCAATTTGGCTTGGATGGTTAGTATTCTTTTCTACGCGTTCGATGTGGCGATAGTTTAGTCAACTACATTAAGTGCTTATCCAAAAAACTTTAATCTTCTTGGTTTTGCAGAACGTTTCGGTGACGGAGATGCTTCACAAATTGGTTTAGATCTCGACGAGGTAACATAATATGAGAAACTATTTGAGAAGGCTGCCACAACGTGGCTAGCAATCTTGCACGATTAGATGTGTGAAACCGAAAGTACAAATGGCTAGTTTTTCCTTCCTTTCTTCTTCCTTTTCCTGCATTTCCTGTTTGTAATTTTGTCTCCCCCTTTCCCACTTACTGATGACAAGCAGGAACTCTTTGCGGAGAAGATCACCGTTAAGGAACACGATGAGATCTTAGAGTAAGCGTTTTATATCTATATGATATTTTAAAGCTTGACTGCTATGATTAAAGGCTCTTTTTTTAAGGCTATATCCCGTCTGCCAGTCGACCCATGTACTCAAAATTTGTTTTGTTCGTGTGTGTGATTGCAGTAATGATGTTCGGGCACCTTCTCAATCAACTGTCTTGAAAGACACAGATGCGAATATGGAGGAAATCCTAGAAACCTTTGAAACAGTGCAGGTACGTGCTAATCGGTTTCAGGTTAATATAGACTTATTATCATCTGATGATTAAGATTTCTATTTATTCTTTTATATTCTGTGTTTAGCCTTCGAATTGTCGTTAGAATTGGCCGAACATTGCTAGTTTGTATGTTACGCAGGATCCAGCATCTACCACGAGACGAGTGGATGAATGCAACTTGTCTAGCGTACGGGATAGTGATGGTTCTTTGAAAGTGGAAGATCATAGTACAGATCTGGAAGCTGTCGGAATTGAAAATAATGAATCCAGGAAGTCGAATATTTACGGTGGTACTACTGATGTTTTAGGTTGGTCTTCCCATAATGATTTGGATTATGAGACTACAAGAATCATGCATCCTGAAGAGAATGGCCATCTTTCTAATGACCCAAAACTTGAACAGTTTTCGTTGCCATCGGAAAAGACGAAAGGAGGTAATTACCTTTTAACTTTTTCTCACTCGTCTTGTTCTCTAGAATCCTGATAATCATGGTTTGCTGCTTCTACCGAAACGATAAATCCCGTCTTCTGTAAAATGCTCATCTGTATTACAGATGCATTGGGTGGCCCAATCACAGGAGAAGAAATGAACAATGGAGTTGTAATAAACAATGAGCCTGAAATGACCTTTCTTGATCACGTTGATGCAGAATATGACTGTAGCCGATCTTCGTTAGATGCAACTGCTGTGTCTCCTAGTTGCTCCGGTGTCACCCCTGATTTGGAGGACTTTGGCCATAAAGCTCGTTCGGATGGCACGTATGCATTAGCATCAGAGGGTCAACTATCCTTAAAACCCATGGACAACTTGGTTGAAGTGCTCTCTCCTAGAAAAGTTGCCCTGGATTCAACGTACCAAGAGGAATCTCCCGGGAGACCTGAGGTTATTGATGCTGAATCTAAGGAATTTCTGGAACCGAAGGACACCGAGACTCAAAATTCTTTCAATGGTGAAGAAATTACATCCATGGAGAAGCCTGTGCTTCAGGCATGCAATTCCCATGGAATCGAACGCGATAGGTCATCTCTTGAAGGTATCGATCGGTGGTTATACCTCATTCTTCTGGAGCTCCCATCATATACTTCATAACTTCGAGAATTAATTAGTTAATCATTTGTGATTTTAGGCGAAAGCTACCAGGCAACTGATGCTGTGACGCAAAATTTGGAAATAAGCGAGAAAGGCGGTACAGAAGTTTCTGAAGATGGACTGGCTAGTTGCAGGGGTCCGAACAAACCTTTTGGTTCTGCATTGTCTAATGATATTTGCACAGAGATTTCGAATAGGTCTCCGACCTCAGACTTCCCTGCACCGGAGAAGTTGCTTTCTGTACCAGAGGGCCTTACCGAAACACACGGTGACGACTTACCGTTGTATTCTTCACTGGACAAAGGAAACTTGGCCGAGGACGACGGTGTTTCTGGAACTAAACTTTTATCTGGGAAGAAGCGAAGCTTTACTGAAAGTACTTTAACAGCCCAGAGTTTTAACTCAGCCGAGTCGGTTGGGGTGCACCGATCTAAGAGGGTTACCGAGTCCATTCCTGATGATGATGATTTGTTATCATCTATTTTAGGTATTATTACATTCCTTTTGACATCTCTATGACAGTGTGCTGATATTTCTGACTTTCTAATTGGTAGACTAGGATGTCACTGAGTTAGTTTTTTCTGTTGATTTAGTTGGAAGACGATCTTCGGTTTTGAAAATGAAACCGTCACCTCCTATGCATGAAACAATATCCTTGAAACGTTCACGACCTGCACTTCGAGTTGGCACCTCGAAGAAGAAGGTGCTTATGGATGACATGATGGTTTTGCATGGAGAGTATGTATCATATGCATCCATTTGTTTATATACTCGATACAATATTCAAGTTTTACTTTACTATCGATTTATAGTTCCTTGTTCGTTATTTAATCGATGAGCTTTTTTTTTGGAATTTCGTCTCTAACCTGCCATTTTAAATATTTCAAGAAAAAACCTGTTTCTAGTACACATTTCACTATTTATTTTAATCGGTAATTACTCACCTTCGCCGTGGTAAACGGGAGTGCCGAGACACTAACAGCATGTGTACTATTATTATTCAGCACAATACGTCACCAACTTACTAGCACTGAAGACATACGACGTGTTCGGAAAAAGGCACCTTGTACTCGTCCGGAAATTTCGATGATTCAGAGACAATTCTTAGAAGATGAGATTTTCAGTGAATCCATATATTCAGGTATTCAGGCATTCTTTATATAATCTCTCTTTTCTTGCTAATTAGTAATCAACTTTTGTTTCCTTATGCTTTAGGTATCTCCAAGGAACTGTCCTCATTGCATGCAGAAGCGTTTAACCTTAGTGAAATCAGGGTTTACGAGAAGGATCCCGTCGGTGCTTCGACCGAGGCAGGAAACAATTTCGAGTCTGCTGTTAGGCCAAATACCACTGAAGAAAGTGCTACAGAAACAAACCCTGATGCGGTGGTCGACAAAAATGATTTCAAATCTCAGCCTTCTCGGGCTACTATTCAGATCGAAACTCAAGAGTTAGCCTTAGAGTGTCCTGATCTTGATGTTCAAGACCAGCAGCAAGTGACTTCAACTGAGAATGCTGGACTGGAACCCGTTGGAGAGCGAGAAAAAATTGATTCTGAAGCCGGAAATATTGCTGATGCAGTTGATAGCTTCGATATCAAGGAGTTAGAGTTGCCGTCCTTAGTCATCGGGGATAAATATGATGATCGAAACGCTTCGTTGCAGATGGATATATCTTGCTTTTCTCCGGAGAAAATATTGGAATCTCAGCCTGGTGTTGAAGATACTTTTACGGTGGAATCGGGGAATGTAGGTCTTGACACTGTCAATGCTAATGATTGCACCGAGATCAGAGATAACGTTGACGATGAAAAACCCGATCACAATGTTTCCCTTGTAACTTCACCTCGAGAAAATGGCGCCAAACCTGCTGAAAGCATCTTAGATGTTAAGTTAGGGGAAATCGATGCAGATGGAGTAAATACAGCAGATTTCGTTTGTGGTGAGAAGGATGGAGCTTCTCTTTGTTTAATTGATGGAGCTCAGATGGATTCTCAATATTCACCAGGATTCGATATGGATTTTAAAAGTACCTCCTTCAATGAAGTTGTGAATCCGAGCTATCCCGAAGAAGCTGATTTGCTCGATATTGTGGACACTGAAATGACTGTCCTCGATCATCCAATAGCCGAAGATCGTGGTGTATGTTTCTCTCTTTTTGTGCTTTTTAAAACATGAAAGGGTTGGATTACGAATTTTTTTGGAAAGAAAAAACGAACACCCATCAGTCCCCGAATGTCGTGTTTAGGAAGAAGGAAGTCGAATTTGTGGGTTCTTACTGTTCTAAATCAATACAAATGTTCAGAAATTGTTTATTTTCTTTGTACAGAATTTCCTGAAAAAGCGTACCCTTTATTTACGTCGATACTTGTTTGCTTCTCGTGTCTAAAACTTTATTTGTCGTGCAGGACTTCGAGGATGCCACGGTGGCCAATGATATAGGTTTGCATTTCATGACATTCTTGATTCTGTACTTAGCAGTGTCCTTATTGTGTTACATAAGAGCAACTCTTGTTGTTATGTTTGCTCACGATGTATCGTTTTCCTCCAGAATTTTTGAACGCAGATGACGACGATGAAGAAGATGAGGACAACGAGCAATTTGCAGCTGATCCTAGCTTTCTCGAAAACAGTGGATGGTCGTCCCGCACCAGGCATGTATTTTATTAGTCATCTTCTTTTTCATCGGATAAGTTTTACATTGATATGTACGCTCTAAGGTGGTGTCGTTTGGATAGTTATCGTGTACGATTGATGTGTTACTTCTAAATGAAGCCACTTTTCGGGTTGCCTTTTCGTTTCCTTCATAATTTTACCGAACACGTCGTTTGTATTCTTTTAAACAGGGCTGTGGCTAGATATCTTCAAAATCTCTTTGATAGGGACTCTGTACATGGGAGAAAGGTCCTTCACATGGATAACTTACTCGTTAACAAAACTCGGAAGGAAGCATCGAGAATGTTTTTCGAGACACTGGTACGTCATTTTGAACCCTCGTAGATTTACGTTGTCGGCACCACGGAATGATTACAAAATGTGGTCTTGGTTTCTGAGTATGGTCGTCGATCGATATATTGTTGCTATCTAGGTTCATGTTTGCCAGCCAAAATTTCTTCCTACTGCTAATTGTGCATGGTTTTCGAATACCACATAGCTAGGAAAGGCTAGAAATGATGGCTCTATTTTGTGAAGGTGTGTTGTTTGGATTCACTAAGGCAAATGAAATGTAACTAGGGCTCGTGTTCGGCTGATGAGAGGGTTTATTACAGGAAAGAGAGTGTTGGTGCAGTCGAACATTGATACGGGAGTGCCCGTCAATGAGATCAAGCCTCTGGCTTTCTCAGATCTTGTGTTCTTCATTGTTGTTCTTGATCCTAGGACTGGTAAATTCATAACCAACGAGGAAGAAGATGATGAATGAATCAACTTTGCTTTAGTTTCTTTCCTTGAGAAGGAAAGAGGAATGTAAGAAGGGGAAGAAGAAAAGGTAAGGAGGAGACGCCGACGGCGACGCCCGACGTTGGCACTAGAGTTGGAGGTTTGGGAAGAGGGGGCCCCTAGAGTTGGAGGTTTGGGAAGAGGGGGCGGGGCAGGAAGAGAAGGAGGAAGAAGAGGCGGGGAGGAGGCGTCGACAATAAGAAATAGGGGATGGGGTGTCGGAAATACTCGTAGAAGTAATTTGATGTGAAAACTTATCCTTCGTTTGTTGGAGACGATCTCACATGTTGTAGGTAGACAATTGGAAGATTTGATGTGTAACGACCCAAGTCCACCGCTAACAGATATTGTCCTCTTAGGGCTTTCCCTCCCAAACTTCCCCTCAAGGTTTTAAAACGTAGCCGTTAGGGAGAGGTTTTCACACCCTTATAAAGAATGCTTCGTCCCCCTCTCCAACTGATTTGGGATCTCACAATCCACTCCCCTTCAAGGCCCAGCGTCCTTGCTAACACTCATTCCCCTCTCCAATCGATGTGGGACCCCGAATCCACCCCTTTCAGGGTCCAGCATCCTTGCTGGCACACCGCCTAGTGTCCACTCCCCTTCAGGGGCTCAGTGTCCTTGCTAGCACACCGCTCGGTGTCTTTTTCTGATACCATTTGTAATGGCCCAAGCCCACCACTAACATATATTGTCCTCTTTCAGTGTCCAGCATCCTTACTGGCACACCGCCTAGTGTCCACTCCCCTTCAAGGGCTCAGTGTCCTTCCTAACACACCGCTCGGTGTCTTTCTCTGATACCATTTGTAACGGCCCAAGCTTACCATTAACAGATATTGTCCTCTTTGGACTTTCTCTCTTGGGCTTCCCCTTAAAGTTTTAAAACACATCTACTGATAATCTTCTGGGCTTCCCCTTGGTTTTAAAACACGTCTACGGATAATCTTATGGTGTCTTGTGTTCTAGAATACATGCTATTTGCTGGTTCATTTATGCATAAAGTTATCCCTCTTTCTGCAGGTTCTGAAGACAAAGGATTACCTCCATGTAGAACAGGAGAGACCCTTTGACAACATTAGTCTAAAGCCAAGAATAAATCTCATGAAATCAAGTTTCTGATTTACTTTAGGAAAATGCAGAGATACACAGCTGGGGAAAAAAACCACAAAAAAAAAAACCAAAAAACAAAATGGCTCCGGTAGATGTTAGTTCAACGATGCACCTCTCGGGATGTCGATAGCTCTCTCCGTCATCAAAAACTCCCCTTCCCAACAAAATAACCTTTTGTTTTTCCTTTCTTCTTTTTCTTATTATTATTATTTATATATTGCTTTGTTTAAGCTAGACGTTTATGTAAGTGAGTCAGTGAGTCGGGTCAGGTCGAGTCGAGTCAAGTGGGCATATCGTATATTAATGTGTTTATGATACCCAACTTTTGTATTATGACAGATACTCTCATGTATATATTATCTGTAAAAATAGTCTTTGCTATTGAAGATCTTCTGATTTATTTGTTG

mRNA sequence

ATGTTCTATTCTCAATTCATATTGGCCAAGAAAGGGCCGCTTGGGACAATATGGATAGCGGCTCATTTGGAGAGGAAGCTGCGGAAGAATCAAGTGGCGGACACTGATATCGGGGTCTCTGTTGATTCGATTCTTTTCCCCGACGTGCCAATTGCACTGCGATTGTCCAGCCATCTTCTCCTTGGGGTGGTGAGGATATATTCTAGAAAGGTGGGTTACCTATTTGACGATTGTAGTGAAGCTCTGCTTAAGATAAAGCAAGCATTCCGTTCTACTGCTGTCGATTTACCACCTGAAGAATCTACTGCTCCATATCATTCTATCACTTTGCCCGAAACTTTTGATCTCGATGATTTTGAGCTTCCGGACAACGAACTTTATCAGGGTAATTATGTTGATCATCACGTTAGTTCTCGGGAGCAAATCACCCTTCAAGATACTATGGAGGGTGTAGTCTACACCACTTCTCAATTTGGCTTGGATGAACGTTTCGGTGACGGAGATGCTTCACAAATTGGTTTAGATCTCGACGAGGAACTCTTTGCGGAGAAGATCACCGTTAAGGAACACGATGAGATCTTAGATAATGATGTTCGGGCACCTTCTCAATCAACTGTCTTGAAAGACACAGATGCGAATATGGAGGAAATCCTAGAAACCTTTGAAACAGTGCAGGATCCAGCATCTACCACGAGACGAGTGGATGAATGCAACTTGTCTAGCGTACGGGATAGTGATGGTTCTTTGAAAGTGGAAGATCATAGTACAGATCTGGAAGCTGTCGGAATTGAAAATAATGAATCCAGGAAGTCGAATATTTACGGTGGTACTACTGATGTTTTAGGTTGGTCTTCCCATAATGATTTGGATTATGAGACTACAAGAATCATGCATCCTGAAGAGAATGGCCATCTTTCTAATGACCCAAAACTTGAACAGTTTTCGTTGCCATCGGAAAAGACGAAAGGAGAATATGACTGTAGCCGATCTTCGTTAGATGCAACTGCTGTGTCTCCTAGTTGCTCCGGTGTCACCCCTGATTTGGAGGACTTTGGCCATAAAGCTCGTTCGGATGGCACGTATGCATTAGCATCAGAGGGTCAACTATCCTTAAAACCCATGGACAACTTGGTTGAAGTGCTCTCTCCTAGAAAAGTTGCCCTGGATTCAACGTACCAAGAGGAATCTCCCGGGAGACCTGAGGTTATTGATGCTGAATCTAAGGAATTTCTGGAACCGAAGGACACCGAGACTCAAAATTCTTTCAATGGTGAAGAAATTACATCCATGGAGAAGCCTGTGCTTCAGGCATGCAATTCCCATGGAATCGAACGCGATAGGTCATCTCTTGAAGGCGAAAGCTACCAGGCAACTGATGCTGTGACGCAAAATTTGGAAATAAGCGAGAAAGGCGGTACAGAAGTTTCTGAAGATGGACTGGCTAGTTGCAGGGGTCCGAACAAACCTTTTGGTTCTGCATTGTCTAATGATATTTGCACAGAGATTTCGAATAGGTCTCCGACCTCAGACTTCCCTGCACCGGAGAAGTTGCTTTCTGTACCAGAGGGCCTTACCGAAACACACGGTGACGACTTACCGTTGTATTCTTCACTGGACAAAGGAAACTTGGCCGAGGACGACGGTGTTTCTGGAACTAAACTTTTATCTGGGAAGAAGCGAAGCTTTACTGAAAGTACTTTAACAGCCCAGAGTTTTAACTCAGCCGAGTCGGTTGGGGTGCACCGATCTAAGAGGGTTACCGAGTCCATTCCTGATGATGATGATTTGTTATCATCTATTTTAGTTGGAAGACGATCTTCGGTTTTGAAAATGAAACCGTCACCTCCTATGCATGAAACAATATCCTTGAAACGTTCACGACCTGCACTTCGAGTTGGCACCTCGAAGAAGAAGGTGCTTATGGATGACATGATGGTTTTGCATGGAGACACAATACGTCACCAACTTACTAGCACTGAAGACATACGACGTGTTCGGAAAAAGGCACCTTGTACTCGTCCGGAAATTTCGATGATTCAGAGACAATTCTTAGAAGATGAGATTTTCAGTGAATCCATATATTCAGGTATCTCCAAGGAACTGTCCTCATTGCATGCAGAAGCGTTTAACCTTAGTGAAATCAGGGTTTACGAGAAGGATCCCGTCGGTGCTTCGACCGAGGCAGGAAACAATTTCGAGTCTGCTGTTAGGCCAAATACCACTGAAGAAAGTGCTACAGAAACAAACCCTGATGCGGTGGTCGACAAAAATGATTTCAAATCTCAGCCTTCTCGGGCTACTATTCAGATCGAAACTCAAGAGTTAGCCTTAGAGTGTCCTGATCTTGATGTTCAAGACCAGCAGCAAGTGACTTCAACTGAGAATGCTGGACTGGAACCCGTTGGAGAGCGAGAAAAAATTGATTCTGAAGCCGGAAATATTGCTGATGCAGTTGATAGCTTCGATATCAAGGAGTTAGAGTTGCCGTCCTTAGTCATCGGGGATAAATATGATGATCGAAACGCTTCGTTGCAGATGGATATATCTTGCTTTTCTCCGGAGAAAATATTGGAATCTCAGCCTGGTGTTGAAGATACTTTTACGGTGGAATCGGGGAATGTAGGTCTTGACACTGTCAATGCTAATGATTGCACCGAGATCAGAGATAACGTTGACGATGAAAAACCCGATCACAATGTTTCCCTTGTAACTTCACCTCGAGAAAATGGCGCCAAACCTGCTGAAAGCATCTTAGATGTTAAGTTAGGGGAAATCGATGCAGATGGAGTAAATACAGCAGATTTCGTTTGTGGTGAGAAGGATGGAGCTTCTCTTTGTTTAATTGATGGAGCTCAGATGGATTCTCAATATTCACCAGGATTCGATATGGATTTTAAAAGTACCTCCTTCAATGAAGTTGTGAATCCGAGCTATCCCGAAGAAGCTGATTTGCTCGATATTGTGGACACTGAAATGACTGTCCTCGATCATCCAATAGCCGAAGATCGTGGTGACTTCGAGGATGCCACGGTGGCCAATGATATAGAATTTTTGAACGCAGATGACGACGATGAAGAAGATGAGGACAACGAGCAATTTGCAGCTGATCCTAGCTTTCTCGAAAACAGTGGATGGTCGTCCCGCACCAGGGCTGTGGCTAGATATCTTCAAAATCTCTTTGATAGGGACTCTGTACATGGGAGAAAGGTCCTTCACATGGATAACTTACTCGTTAACAAAACTCGGAAGGAAGCATCGAGAATGTTTTTCGAGACACTGGTTCTGAAGACAAAGGATTACCTCCATGTAGAACAGGAGAGACCCTTTGACAACATTAGTCTAAAGCCAAGAATAAATCTCATGAAATCAAGTTTCTGATTTACTTTAGGAAAATGCAGAGATACACAGCTGGGGAAAAAAACCACAAAAAAAAAAACCAAAAAACAAAATGGCTCCGGTAGATGTTAGTTCAACGATGCACCTCTCGGGATGTCGATAGCTCTCTCCGTCATCAAAAACTCCCCTTCCCAACAAAATAACCTTTTGTTTTTCCTTTCTTCTTTTTCTTATTATTATTATTTATATATTGCTTTGTTTAAGCTAGACGTTTATGTAAGTGAGTCAGTGAGTCGGGTCAGGTCGAGTCGAGTCAAGTGGGCATATCGTATATTAATGTGTTTATGATACCCAACTTTTGTATTATGACAGATACTCTCATGTATATATTATCTGTAAAAATAGTCTTTGCTATTGAAGATCTTCTGATTTATTTGTTG

Coding sequence (CDS)

ATGTTCTATTCTCAATTCATATTGGCCAAGAAAGGGCCGCTTGGGACAATATGGATAGCGGCTCATTTGGAGAGGAAGCTGCGGAAGAATCAAGTGGCGGACACTGATATCGGGGTCTCTGTTGATTCGATTCTTTTCCCCGACGTGCCAATTGCACTGCGATTGTCCAGCCATCTTCTCCTTGGGGTGGTGAGGATATATTCTAGAAAGGTGGGTTACCTATTTGACGATTGTAGTGAAGCTCTGCTTAAGATAAAGCAAGCATTCCGTTCTACTGCTGTCGATTTACCACCTGAAGAATCTACTGCTCCATATCATTCTATCACTTTGCCCGAAACTTTTGATCTCGATGATTTTGAGCTTCCGGACAACGAACTTTATCAGGGTAATTATGTTGATCATCACGTTAGTTCTCGGGAGCAAATCACCCTTCAAGATACTATGGAGGGTGTAGTCTACACCACTTCTCAATTTGGCTTGGATGAACGTTTCGGTGACGGAGATGCTTCACAAATTGGTTTAGATCTCGACGAGGAACTCTTTGCGGAGAAGATCACCGTTAAGGAACACGATGAGATCTTAGATAATGATGTTCGGGCACCTTCTCAATCAACTGTCTTGAAAGACACAGATGCGAATATGGAGGAAATCCTAGAAACCTTTGAAACAGTGCAGGATCCAGCATCTACCACGAGACGAGTGGATGAATGCAACTTGTCTAGCGTACGGGATAGTGATGGTTCTTTGAAAGTGGAAGATCATAGTACAGATCTGGAAGCTGTCGGAATTGAAAATAATGAATCCAGGAAGTCGAATATTTACGGTGGTACTACTGATGTTTTAGGTTGGTCTTCCCATAATGATTTGGATTATGAGACTACAAGAATCATGCATCCTGAAGAGAATGGCCATCTTTCTAATGACCCAAAACTTGAACAGTTTTCGTTGCCATCGGAAAAGACGAAAGGAGAATATGACTGTAGCCGATCTTCGTTAGATGCAACTGCTGTGTCTCCTAGTTGCTCCGGTGTCACCCCTGATTTGGAGGACTTTGGCCATAAAGCTCGTTCGGATGGCACGTATGCATTAGCATCAGAGGGTCAACTATCCTTAAAACCCATGGACAACTTGGTTGAAGTGCTCTCTCCTAGAAAAGTTGCCCTGGATTCAACGTACCAAGAGGAATCTCCCGGGAGACCTGAGGTTATTGATGCTGAATCTAAGGAATTTCTGGAACCGAAGGACACCGAGACTCAAAATTCTTTCAATGGTGAAGAAATTACATCCATGGAGAAGCCTGTGCTTCAGGCATGCAATTCCCATGGAATCGAACGCGATAGGTCATCTCTTGAAGGCGAAAGCTACCAGGCAACTGATGCTGTGACGCAAAATTTGGAAATAAGCGAGAAAGGCGGTACAGAAGTTTCTGAAGATGGACTGGCTAGTTGCAGGGGTCCGAACAAACCTTTTGGTTCTGCATTGTCTAATGATATTTGCACAGAGATTTCGAATAGGTCTCCGACCTCAGACTTCCCTGCACCGGAGAAGTTGCTTTCTGTACCAGAGGGCCTTACCGAAACACACGGTGACGACTTACCGTTGTATTCTTCACTGGACAAAGGAAACTTGGCCGAGGACGACGGTGTTTCTGGAACTAAACTTTTATCTGGGAAGAAGCGAAGCTTTACTGAAAGTACTTTAACAGCCCAGAGTTTTAACTCAGCCGAGTCGGTTGGGGTGCACCGATCTAAGAGGGTTACCGAGTCCATTCCTGATGATGATGATTTGTTATCATCTATTTTAGTTGGAAGACGATCTTCGGTTTTGAAAATGAAACCGTCACCTCCTATGCATGAAACAATATCCTTGAAACGTTCACGACCTGCACTTCGAGTTGGCACCTCGAAGAAGAAGGTGCTTATGGATGACATGATGGTTTTGCATGGAGACACAATACGTCACCAACTTACTAGCACTGAAGACATACGACGTGTTCGGAAAAAGGCACCTTGTACTCGTCCGGAAATTTCGATGATTCAGAGACAATTCTTAGAAGATGAGATTTTCAGTGAATCCATATATTCAGGTATCTCCAAGGAACTGTCCTCATTGCATGCAGAAGCGTTTAACCTTAGTGAAATCAGGGTTTACGAGAAGGATCCCGTCGGTGCTTCGACCGAGGCAGGAAACAATTTCGAGTCTGCTGTTAGGCCAAATACCACTGAAGAAAGTGCTACAGAAACAAACCCTGATGCGGTGGTCGACAAAAATGATTTCAAATCTCAGCCTTCTCGGGCTACTATTCAGATCGAAACTCAAGAGTTAGCCTTAGAGTGTCCTGATCTTGATGTTCAAGACCAGCAGCAAGTGACTTCAACTGAGAATGCTGGACTGGAACCCGTTGGAGAGCGAGAAAAAATTGATTCTGAAGCCGGAAATATTGCTGATGCAGTTGATAGCTTCGATATCAAGGAGTTAGAGTTGCCGTCCTTAGTCATCGGGGATAAATATGATGATCGAAACGCTTCGTTGCAGATGGATATATCTTGCTTTTCTCCGGAGAAAATATTGGAATCTCAGCCTGGTGTTGAAGATACTTTTACGGTGGAATCGGGGAATGTAGGTCTTGACACTGTCAATGCTAATGATTGCACCGAGATCAGAGATAACGTTGACGATGAAAAACCCGATCACAATGTTTCCCTTGTAACTTCACCTCGAGAAAATGGCGCCAAACCTGCTGAAAGCATCTTAGATGTTAAGTTAGGGGAAATCGATGCAGATGGAGTAAATACAGCAGATTTCGTTTGTGGTGAGAAGGATGGAGCTTCTCTTTGTTTAATTGATGGAGCTCAGATGGATTCTCAATATTCACCAGGATTCGATATGGATTTTAAAAGTACCTCCTTCAATGAAGTTGTGAATCCGAGCTATCCCGAAGAAGCTGATTTGCTCGATATTGTGGACACTGAAATGACTGTCCTCGATCATCCAATAGCCGAAGATCGTGGTGACTTCGAGGATGCCACGGTGGCCAATGATATAGAATTTTTGAACGCAGATGACGACGATGAAGAAGATGAGGACAACGAGCAATTTGCAGCTGATCCTAGCTTTCTCGAAAACAGTGGATGGTCGTCCCGCACCAGGGCTGTGGCTAGATATCTTCAAAATCTCTTTGATAGGGACTCTGTACATGGGAGAAAGGTCCTTCACATGGATAACTTACTCGTTAACAAAACTCGGAAGGAAGCATCGAGAATGTTTTTCGAGACACTGGTTCTGAAGACAAAGGATTACCTCCATGTAGAACAGGAGAGACCCTTTGACAACATTAGTCTAAAGCCAAGAATAAATCTCATGAAATCAAGTTTCTGA

Protein sequence

MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLLLGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFELPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEELFAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLSSVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPEENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF

Homology

[Close]

BLAST of CmoCh05G007880 vs. ExPASy Swiss-Prot
Match: Q8W1Y0 (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE=2 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 2.7e-187
Identity = 478/1160 (41.21%), Postives = 642/1160 (55.34%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+ PIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKV YLFDDCSEALLK+KQAFRS AVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNE++QGNYVDHHVS++EQITLQDTM+GVVY+TSQFGLDERFGDGD SQ  LDLDE +
Sbjct: 121  LPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDEAV 180

Query: 181  FAEKITVKEHDE---ILDNDVRAPSQSTVLKDT----------DANMEEI------LETF 240
            F +K  +   DE    +D++    + +  +KD+          D N E++       E  
Sbjct: 181  FQDKDVIGSDDEGVPGIDHNAYLDAAAPGIKDSMEGVSEAMPMDFNEEQVEDLAMNNEFI 240

Query: 241  ETVQDPASTTRRVDECNLSSVRDS---DGSLKVEDHSTDLEAVGIENNESRKSNIYGGTT 300
            E  Q P  T   V+  N SSVR+    D  + VED + +    GI+++    +N      
Sbjct: 241  EDAQAP-QTPGLVEVPNSSSVREQMACDDHMDVEDLNAE---EGIKSSGELNANEMPKRG 300

Query: 301  DVLGWSSHNDLDYETTRI----MHPEENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDA 360
            + L  S +N  +   T +       +EN +  N+P         E+ + E+         
Sbjct: 301  EDLS-SEYNAPESAVTPVEVDKSQIDENVNTQNEP---------EEERAEH--------V 360

Query: 361  TAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVALDSTYQE 420
               SP CS +T ++ED G      G   +        KP               D+    
Sbjct: 361  HVTSPCCSHITTEMEDPGQVMNEAGANVVPD------KP---------------DAVPPL 420

Query: 421  ESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRSSLEGES 480
            E+PG     + +        + ET +S  G+E  +  +P  Q  N+H  +    +L G  
Sbjct: 421  ETPGEE---NRDHFAIATEVNQETDSSLQGDE-QAYSRPDGQLNNAHETDEQLGNLTG-- 480

Query: 481  YQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPTSDFPAP 540
               TD                                                 SDFP P
Sbjct: 481  --FTD-------------------------------------------------SDFPPP 540

Query: 541  EKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNS 600
            EK+L+VP    +  G+D  + S+ DK +    +  +G   ++GKKR+FTESTLTA+S NS
Sbjct: 541  EKVLAVPN--RQGDGNDFMVESTPDKEDPGTCNDDAGNNNITGKKRTFTESTLTAESLNS 600

Query: 601  AESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRPALRVGT 660
             ESVG+ +SKR  +S+PDDDDLLSSILVG +SS LKM+P+P + E  + KR R A R   
Sbjct: 601  VESVGLIQSKRTADSVPDDDDLLSSILVG-KSSFLKMRPTPVL-EPATTKRLRSAPRSTA 660

Query: 661  SKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIY 720
            +K+KVLMDD MVLHGD IR QLT+TEDIRRVRKKAPCT PEI M+QRQ LED +F E I+
Sbjct: 661  TKRKVLMDDPMVLHGDIIRQQLTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGLFKEPIF 720

Query: 721  SGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATETNPDAVV 780
            +G+S EL SLH E ++L  I + E D   AS  A  + E +V     EE+ TE + D   
Sbjct: 721  TGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNECSV--TAVEENKTEESSDPQA 780

Query: 781  DKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNI 840
              ND + QP  A    + ++   +  +L  +D  ++   E + LE + E      E   +
Sbjct: 781  HPNDCEEQPGTAHTHPQEEQTINQQEEL--KDDNEL--AEKSDLEVLKEGNGAADEVNLV 840

Query: 841  A-DAVDSFDIKEL--ELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFTVES 900
              D V     +E    +  L + + +++ +     D+ C  P     ++    D   +  
Sbjct: 841  VIDDVSQIPSEEKLDRVEDLQVEESHENHDGEGGQDV-CADP-----NEKSCTDVIEIAE 900

Query: 901  GNVGLDTVNANDCTEIRDNV--DDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDA-D 960
            G+  ++ +      ++ D +  +DEK D +  +    R++      ++   + G ++A D
Sbjct: 901  GDTDINPIFNEMDLKVEDELPHEDEKTDASAEVSELGRDDQTPCDNTVGSTETGCLEAGD 960

Query: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020
              N A   C E             +    S G + + +S +  E  N    EEA + + +
Sbjct: 961  LSNMALENCNE------------PLVEANSDGLNPETESYNKYEPHNEMSNEEASMQNAL 1020

Query: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADD---DDEEDEDNEQFAADPSFLENSGW 1080
            D E T  D  +  D  + +    A+D  FLN DD   D++ +ED+ Q+  +   LENSGW
Sbjct: 1021 DGEHTSRD-GLMGDNDEMDTMENAHDTGFLNVDDDEVDEDHEEDDIQYDDETRLLENSGW 1031

Query: 1081 SSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQ 1126
            SSRTRAVA+YLQ LFD+++ +G+ VL  D LL  KTRKEASRMFFETLVLKT+DY+ VEQ
Sbjct: 1081 SSRTRAVAKYLQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQVEQ 1031

[Close]

BLAST of CmoCh05G007880 vs. ExPASy Swiss-Prot
Match: Q9FQ19 (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-34
Identity = 95/234 (40.60%), Postives = 138/234 (58.97%), Query Frame = 0


Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
           MFYS  +LA+KGPLGT+W AAH+ ++L+K+Q    +I  +VD+I+FP+VP+ALR SSHLL
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
           +GVVRIYS+KV YL++D +     + +AF ST V+LP +   AP  S+TLP+  +LD+F+
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNLDEFD 120

Query: 121 LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
           L D+ L      D+H  S E ITL D +   +        DE   D  +  I +D+D+  
Sbjct: 121 LEDDTL--DMEFDNHTRSEEDITLTDQIPTGIDPYVAVTFDE---DIISESIPMDVDQST 180

Query: 181 -----FAEKITVK-EHDEILDNDVRAPSQSTVLKDTDA-NMEEILETFETVQDP 228
                   +I V+  H+   DN+   P  S +  DT   +   + E F  VQDP
Sbjct: 181 EPVSRHTGEIDVETAHETGPDNE---PRDSNIAFDTGTYSPRNVTEEFTEVQDP 226

HSP 2 Score: 59.7 bits (143), Expect = 2.5e-07
Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 1037 PSFLENSGWSSRTRAVARYLQNLFDRD---SVHGRKVLHMDNLLVNKTRKEASRMFFETL 1096
            P+  +++  + R RA+A+YL+         S H    L +  +L  KTRK A+RMFFETL
Sbjct: 601  PASQDSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETL 660

Query: 1097 VLKTKDYLHVEQERPFDNISLK 1116
            VLK++  + ++Q+RP+ +I+LK
Sbjct: 661  VLKSRGLIDMQQDRPYGDIALK 682

[Close]

BLAST of CmoCh05G007880 vs. ExPASy Swiss-Prot
Match: O93310 (Double-strand-break repair protein rad21 homolog OS=Xenopus laevis OX=8355 GN=rad21 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.8e-32
Identity = 77/168 (45.83%), Postives = 106/168 (63.10%), Query Frame = 0


Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
           MFY+ F+L+K+GPL  IW+AAH ++KL K  V + ++  SV+SI+ P V +ALR S HLL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIICPKVKMALRTSGHLL 60

Query: 61  LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
           LGVVRIY RK  YL  DC+EA +KIK AFR   VDLP E   A Y++ITLPE F   D  
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120

Query: 121 LPD-NELYQGNYVDHHVSSREQITLQDTMEGVVYTT----SQFGLDER 164
           LPD +++        + S  E+IT+++ +  +          FG+D+R
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVSNINILQDNDFGDFGMDDR 168

[Close]

BLAST of CmoCh05G007880 vs. ExPASy Swiss-Prot
Match: O60216 (Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD21 PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 4.9e-32
Identity = 77/168 (45.83%), Postives = 106/168 (63.10%), Query Frame = 0


Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
           MFY+ F+L+K+GPL  IW+AAH ++KL K  V + ++  SV+SI+ P V +ALR S HLL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
           LGVVRIY RK  YL  DC+EA +KIK AFR   VDLP E   A Y++ITLPE F   D  
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120

Query: 121 LPD-NELYQGNYVDHHVSSREQITLQDTMEGVVYTT----SQFGLDER 164
           LPD +++        + S  E+IT+++ +  +          FG+D+R
Sbjct: 121 LPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMDDR 168

[Close]

BLAST of CmoCh05G007880 vs. ExPASy Swiss-Prot
Match: Q61550 (Double-strand-break repair protein rad21 homolog OS=Mus musculus OX=10090 GN=Rad21 PE=1 SV=3)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-32
Identity = 84/209 (40.19%), Postives = 116/209 (55.50%), Query Frame = 0


Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
           MFY+ F+L+K+GPL  IW+AAH ++KL K  V + ++  SV+SI+ P V +ALR S HLL
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
           LGVVRIY RK  YL  DC+EA +KIK AFR   VDLP E   A Y++ITLPE F   D  
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP 120

Query: 121 LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
           LPD +          +   +Q +L  +    +    + G      + D    G+D D E+
Sbjct: 121 LPDLD---------DIDVAQQFSLNQSRVEEITMREEVGNISILQENDFGDFGMD-DREI 180

Query: 181 FAEKITVKEHDEIL----DNDVRAPSQST 206
             E    ++ D ++     N +  P QST
Sbjct: 181 MREGSAFEDDDMLVSTSASNLLLEPEQST 199

[Close]

BLAST of CmoCh05G007880 vs. ExPASy TrEMBL
Match: A0A6J1EPE1 (sister chromatid cohesion 1 protein 4-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111436172 PE=3 SV=1)

HSP 1 Score: 2183.7 bits (5657), Expect = 0.0e+00
Identity = 1125/1125 (100.00%), Postives = 1125/1125 (100.00%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGT 360
            ENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGT
Sbjct: 301  ENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGT 360

Query: 361  YALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQN 420
            YALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQN
Sbjct: 361  YALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQN 420

Query: 421  SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGL 480
            SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGL
Sbjct: 421  SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGL 480

Query: 481  ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK 540
            ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK
Sbjct: 481  ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK 540

Query: 541  GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI 600
            GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI
Sbjct: 541  GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI 600

Query: 601  LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE 660
            LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE
Sbjct: 601  LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE 660

Query: 661  DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD 720
            DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD
Sbjct: 661  DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD 720

Query: 721  PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIETQELALECP 780
            PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIETQELALECP
Sbjct: 721  PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIETQELALECP 780

Query: 781  DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR 840
            DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR
Sbjct: 781  DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR 840

Query: 841  NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV 900
            NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV
Sbjct: 841  NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV 900

Query: 901  SLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPG 960
            SLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPG
Sbjct: 901  SLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPG 960

Query: 961  FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNA 1020
            FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNA
Sbjct: 961  FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNA 1020

Query: 1021 DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK 1080
            DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK
Sbjct: 1021 DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK 1080

Query: 1081 TRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF 1126
            TRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF
Sbjct: 1081 TRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF 1125

[Close]

BLAST of CmoCh05G007880 vs. ExPASy TrEMBL
Match: A0A6J1ENB7 (sister chromatid cohesion 1 protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436172 PE=3 SV=1)

HSP 1 Score: 2167.1 bits (5614), Expect = 0.0e+00
Identity = 1125/1157 (97.23%), Postives = 1125/1157 (97.23%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKG--------------------------------EYDCS 360
            ENGHLSNDPKLEQFSLPSEKTKG                                EYDCS
Sbjct: 301  ENGHLSNDPKLEQFSLPSEKTKGDALGGPITGEEMNNGVVINNEPEMTFLDHVDAEYDCS 360

Query: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420
            RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL
Sbjct: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420

Query: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480
            DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS
Sbjct: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480

Query: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540
            SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT
Sbjct: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540

Query: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600
            SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT
Sbjct: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600

Query: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660
            AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP
Sbjct: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660

Query: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720
            ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI
Sbjct: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720

Query: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780
            FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET
Sbjct: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780

Query: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840
            NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID
Sbjct: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840

Query: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900
            SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT
Sbjct: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900

Query: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960
            VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD
Sbjct: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960

Query: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020
            GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV
Sbjct: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020

Query: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080
            DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR
Sbjct: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080

Query: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1126
            TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP
Sbjct: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1140

[Close]

BLAST of CmoCh05G007880 vs. ExPASy TrEMBL
Match: A0A6J1EST0 (sister chromatid cohesion 1 protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436172 PE=3 SV=1)

HSP 1 Score: 2149.4 bits (5568), Expect = 0.0e+00
Identity = 1119/1157 (96.72%), Postives = 1119/1157 (96.72%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEIL      QDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEIL------QDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKG--------------------------------EYDCS 360
            ENGHLSNDPKLEQFSLPSEKTKG                                EYDCS
Sbjct: 301  ENGHLSNDPKLEQFSLPSEKTKGDALGGPITGEEMNNGVVINNEPEMTFLDHVDAEYDCS 360

Query: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420
            RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL
Sbjct: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420

Query: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480
            DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS
Sbjct: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480

Query: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540
            SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT
Sbjct: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540

Query: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600
            SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT
Sbjct: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600

Query: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660
            AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP
Sbjct: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660

Query: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720
            ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI
Sbjct: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720

Query: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780
            FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET
Sbjct: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780

Query: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840
            NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID
Sbjct: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840

Query: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900
            SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT
Sbjct: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900

Query: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960
            VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD
Sbjct: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960

Query: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020
            GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV
Sbjct: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020

Query: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080
            DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR
Sbjct: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080

Query: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1126
            TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP
Sbjct: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1140

[Close]

BLAST of CmoCh05G007880 vs. ExPASy TrEMBL
Match: A0A6J1KCF1 (sister chromatid cohesion 1 protein 4-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111492019 PE=3 SV=1)

HSP 1 Score: 2102.0 bits (5445), Expect = 0.0e+00
Identity = 1090/1128 (96.63%), Postives = 1100/1128 (97.52%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEIL NDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILGNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYE+TRIMH E
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYESTRIMHAE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGT 360
            ENGH SNDPKLEQFSLP+EKTKGEYD SRSSLD TAVSPSCSGVTPDLEDFGHKARSDGT
Sbjct: 301  ENGHPSNDPKLEQFSLPTEKTKGEYDRSRSSLDVTAVSPSCSGVTPDLEDFGHKARSDGT 360

Query: 361  YALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQN 420
            YALASEGQLSLKPMDNLVEVLSPRKVA DSTYQEESPGRPEVIDAESKEF EPKDTETQN
Sbjct: 361  YALASEGQLSLKPMDNLVEVLSPRKVAPDSTYQEESPGRPEVIDAESKEFQEPKDTETQN 420

Query: 421  SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGL 480
            SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESY+ATDAV +NLEISEK GTEVSEDG 
Sbjct: 421  SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYRATDAVMRNLEISEKAGTEVSEDGQ 480

Query: 481  ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK 540
            ASCR PNKP   ALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK
Sbjct: 481  ASCRDPNKPLDCALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK 540

Query: 541  GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI 600
            GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKR+ ESIPDDDDLLSSI
Sbjct: 541  GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRIAESIPDDDDLLSSI 600

Query: 601  LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE 660
            LVGRRSSVLKMKPSPP+HETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE
Sbjct: 601  LVGRRSSVLKMKPSPPVHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE 660

Query: 661  DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD 720
            DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD
Sbjct: 661  DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD 720

Query: 721  PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIET---QELAL 780
             VGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDF+SQPSR TIQIET   QELAL
Sbjct: 721  LVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFESQPSRDTIQIETEFAQELAL 780

Query: 781  ECPDLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKY 840
            ECPDLDVQDQQQVTSTENAGLEP+ EREKID EAGNIADAVDSFDIKELELPSL+IGDKY
Sbjct: 781  ECPDLDVQDQQQVTSTENAGLEPIREREKIDYEAGNIADAVDSFDIKELELPSLIIGDKY 840

Query: 841  DDRNASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPD 900
            DDRNASLQMDISCFSPEKILESQPGVEDTF VESGNVGLDTVNANDCTEIRDNVDDEKPD
Sbjct: 841  DDRNASLQMDISCFSPEKILESQPGVEDTFMVESGNVGLDTVNANDCTEIRDNVDDEKPD 900

Query: 901  HNVSLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQY 960
            HN SLVTSPRENGAKPAE ILDVKLGEIDADGVNTADFVC EKDGASLCLIDGAQMDSQY
Sbjct: 901  HNFSLVTSPRENGAKPAERILDVKLGEIDADGVNTADFVCDEKDGASLCLIDGAQMDSQY 960

Query: 961  SPGFDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEF 1020
            SPGFDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVL+ PIAEDRGDFEDATVANDIEF
Sbjct: 961  SPGFDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLNRPIAEDRGDFEDATVANDIEF 1020

Query: 1021 LNADDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLL 1080
            LNADDDDEEDEDN QFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLL
Sbjct: 1021 LNADDDDEEDEDNVQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLL 1080

Query: 1081 VNKTRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF 1126
            VNKTRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF
Sbjct: 1081 VNKTRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF 1128

[Close]

BLAST of CmoCh05G007880 vs. ExPASy TrEMBL
Match: A0A6J1K641 (sister chromatid cohesion 1 protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492019 PE=3 SV=1)

HSP 1 Score: 2085.5 bits (5402), Expect = 0.0e+00
Identity = 1090/1160 (93.97%), Postives = 1100/1160 (94.83%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEIL NDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILGNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYE+TRIMH E
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYESTRIMHAE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKG--------------------------------EYDCS 360
            ENGH SNDPKLEQFSLP+EKTKG                                EYD S
Sbjct: 301  ENGHPSNDPKLEQFSLPTEKTKGDALGGPITGEEMNNGVVINNEPEMTFLDHVDAEYDRS 360

Query: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420
            RSSLD TAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVA 
Sbjct: 361  RSSLDVTAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAP 420

Query: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480
            DSTYQEESPGRPEVIDAESKEF EPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS
Sbjct: 421  DSTYQEESPGRPEVIDAESKEFQEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480

Query: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540
            SLEGESY+ATDAV +NLEISEK GTEVSEDG ASCR PNKP   ALSNDICTEISNRSPT
Sbjct: 481  SLEGESYRATDAVMRNLEISEKAGTEVSEDGQASCRDPNKPLDCALSNDICTEISNRSPT 540

Query: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600
            SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT
Sbjct: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600

Query: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660
            AQSFNSAESVGVHRSKR+ ESIPDDDDLLSSILVGRRSSVLKMKPSPP+HETISLKRSRP
Sbjct: 601  AQSFNSAESVGVHRSKRIAESIPDDDDLLSSILVGRRSSVLKMKPSPPVHETISLKRSRP 660

Query: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720
            ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI
Sbjct: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720

Query: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780
            FSESIYSGISKELSSLHAEAFNLSEIRVYEKD VGASTEAGNNFESAVRPNTTEESATET
Sbjct: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDLVGASTEAGNNFESAVRPNTTEESATET 780

Query: 781  NPDAVVDKNDFKSQPSRATIQIET---QELALECPDLDVQDQQQVTSTENAGLEPVGERE 840
            NPDAVVDKNDF+SQPSR TIQIET   QELALECPDLDVQDQQQVTSTENAGLEP+ ERE
Sbjct: 781  NPDAVVDKNDFESQPSRDTIQIETEFAQELALECPDLDVQDQQQVTSTENAGLEPIRERE 840

Query: 841  KIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVED 900
            KID EAGNIADAVDSFDIKELELPSL+IGDKYDDRNASLQMDISCFSPEKILESQPGVED
Sbjct: 841  KIDYEAGNIADAVDSFDIKELELPSLIIGDKYDDRNASLQMDISCFSPEKILESQPGVED 900

Query: 901  TFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEI 960
            TF VESGNVGLDTVNANDCTEIRDNVDDEKPDHN SLVTSPRENGAKPAE ILDVKLGEI
Sbjct: 901  TFMVESGNVGLDTVNANDCTEIRDNVDDEKPDHNFSLVTSPRENGAKPAERILDVKLGEI 960

Query: 961  DADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLL 1020
            DADGVNTADFVC EKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLL
Sbjct: 961  DADGVNTADFVCDEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLL 1020

Query: 1021 DIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGW 1080
            DIVDTEMTVL+ PIAEDRGDFEDATVANDIEFLNADDDDEEDEDN QFAADPSFLENSGW
Sbjct: 1021 DIVDTEMTVLNRPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNVQFAADPSFLENSGW 1080

Query: 1081 SSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQ 1126
            SSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQ
Sbjct: 1081 SSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQ 1140

[Close]

BLAST of CmoCh05G007880 vs. NCBI nr
Match: XP_022929654.1 (sister chromatid cohesion 1 protein 4-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 2183.7 bits (5657), Expect = 0.0e+00
Identity = 1125/1125 (100.00%), Postives = 1125/1125 (100.00%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGT 360
            ENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGT
Sbjct: 301  ENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGT 360

Query: 361  YALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQN 420
            YALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQN
Sbjct: 361  YALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQN 420

Query: 421  SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGL 480
            SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGL
Sbjct: 421  SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGL 480

Query: 481  ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK 540
            ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK
Sbjct: 481  ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK 540

Query: 541  GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI 600
            GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI
Sbjct: 541  GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI 600

Query: 601  LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE 660
            LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE
Sbjct: 601  LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE 660

Query: 661  DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD 720
            DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD
Sbjct: 661  DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD 720

Query: 721  PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIETQELALECP 780
            PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIETQELALECP
Sbjct: 721  PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIETQELALECP 780

Query: 781  DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR 840
            DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR
Sbjct: 781  DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR 840

Query: 841  NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV 900
            NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV
Sbjct: 841  NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV 900

Query: 901  SLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPG 960
            SLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPG
Sbjct: 901  SLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPG 960

Query: 961  FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNA 1020
            FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNA
Sbjct: 961  FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNA 1020

Query: 1021 DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK 1080
            DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK
Sbjct: 1021 DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK 1080

Query: 1081 TRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF 1126
            TRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF
Sbjct: 1081 TRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF 1125

[Close]

BLAST of CmoCh05G007880 vs. NCBI nr
Match: XP_022929652.1 (sister chromatid cohesion 1 protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 2167.1 bits (5614), Expect = 0.0e+00
Identity = 1125/1157 (97.23%), Postives = 1125/1157 (97.23%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKG--------------------------------EYDCS 360
            ENGHLSNDPKLEQFSLPSEKTKG                                EYDCS
Sbjct: 301  ENGHLSNDPKLEQFSLPSEKTKGDALGGPITGEEMNNGVVINNEPEMTFLDHVDAEYDCS 360

Query: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420
            RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL
Sbjct: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420

Query: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480
            DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS
Sbjct: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480

Query: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540
            SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT
Sbjct: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540

Query: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600
            SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT
Sbjct: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600

Query: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660
            AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP
Sbjct: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660

Query: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720
            ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI
Sbjct: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720

Query: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780
            FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET
Sbjct: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780

Query: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840
            NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID
Sbjct: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840

Query: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900
            SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT
Sbjct: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900

Query: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960
            VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD
Sbjct: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960

Query: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020
            GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV
Sbjct: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020

Query: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080
            DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR
Sbjct: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080

Query: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1126
            TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP
Sbjct: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1140

[Close]

BLAST of CmoCh05G007880 vs. NCBI nr
Match: KAG6598927.1 (Sister chromatid cohesion 1 protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2157.9 bits (5590), Expect = 0.0e+00
Identity = 1113/1125 (98.93%), Postives = 1118/1125 (99.38%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDATAVSPSCSGVTPDLEDFGHKARSDGT 360
            ENGHLSNDPKLEQFSLP+EKTKGEYD SRSSLDATAVSPSCS VTPDLEDFGHKARSDGT
Sbjct: 301  ENGHLSNDPKLEQFSLPTEKTKGEYDRSRSSLDATAVSPSCSSVTPDLEDFGHKARSDGT 360

Query: 361  YALASEGQLSLKPMDNLVEVLSPRKVALDSTYQEESPGRPEVIDAESKEFLEPKDTETQN 420
            YALASEGQLSLKPMDNLVEVLSPRKVA DSTYQEESPGRPEVIDAESKEF EPKDTETQN
Sbjct: 361  YALASEGQLSLKPMDNLVEVLSPRKVAPDSTYQEESPGRPEVIDAESKEFQEPKDTETQN 420

Query: 421  SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTQNLEISEKGGTEVSEDGL 480
            SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVT+NLEISE+GGTEVSEDG 
Sbjct: 421  SFNGEEITSMEKPVLQACNSHGIERDRSSLEGESYQATDAVTRNLEISEEGGTEVSEDGQ 480

Query: 481  ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK 540
            ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK
Sbjct: 481  ASCRGPNKPFGSALSNDICTEISNRSPTSDFPAPEKLLSVPEGLTETHGDDLPLYSSLDK 540

Query: 541  GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI 600
            GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI
Sbjct: 541  GNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNSAESVGVHRSKRVTESIPDDDDLLSSI 600

Query: 601  LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE 660
            LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE
Sbjct: 601  LVGRRSSVLKMKPSPPMHETISLKRSRPALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTE 660

Query: 661  DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD 720
            DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD
Sbjct: 661  DIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIYSGISKELSSLHAEAFNLSEIRVYEKD 720

Query: 721  PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFKSQPSRATIQIETQELALECP 780
            PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDF+SQPSRATIQIETQELALECP
Sbjct: 721  PVGASTEAGNNFESAVRPNTTEESATETNPDAVVDKNDFESQPSRATIQIETQELALECP 780

Query: 781  DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR 840
            DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR
Sbjct: 781  DLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNIADAVDSFDIKELELPSLVIGDKYDDR 840

Query: 841  NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV 900
            NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV
Sbjct: 841  NASLQMDISCFSPEKILESQPGVEDTFTVESGNVGLDTVNANDCTEIRDNVDDEKPDHNV 900

Query: 901  SLVTSPRENGAKPAESILDVKLGEIDADGVNTADFVCGEKDGASLCLIDGAQMDSQYSPG 960
            SLVTSPRENGAKPAESILDVKLGEIDADG NTADFVCGEKDGASLCLIDGAQMDSQYSPG
Sbjct: 901  SLVTSPRENGAKPAESILDVKLGEIDADGANTADFVCGEKDGASLCLIDGAQMDSQYSPG 960

Query: 961  FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDHPIAEDRGDFEDATVANDIEFLNA 1020
            FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLD PIAEDRGDFEDATVANDIEFLNA
Sbjct: 961  FDMDFKSTSFNEVVNPSYPEEADLLDIVDTEMTVLDRPIAEDRGDFEDATVANDIEFLNA 1020

Query: 1021 DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK 1080
            DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK
Sbjct: 1021 DDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNK 1080

Query: 1081 TRKEASRMFFETLVLKTKDYLHVEQERPFDNISLKPRINLMKSSF 1126
            TRKEASRMFFETLVLKTKDYLHVEQERPFDNISL+PRINLMKSSF
Sbjct: 1081 TRKEASRMFFETLVLKTKDYLHVEQERPFDNISLRPRINLMKSSF 1125

[Close]

BLAST of CmoCh05G007880 vs. NCBI nr
Match: XP_022929653.1 (sister chromatid cohesion 1 protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 2149.4 bits (5568), Expect = 0.0e+00
Identity = 1119/1157 (96.72%), Postives = 1119/1157 (96.72%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEIL      QDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEIL------QDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKG--------------------------------EYDCS 360
            ENGHLSNDPKLEQFSLPSEKTKG                                EYDCS
Sbjct: 301  ENGHLSNDPKLEQFSLPSEKTKGDALGGPITGEEMNNGVVINNEPEMTFLDHVDAEYDCS 360

Query: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420
            RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL
Sbjct: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420

Query: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480
            DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS
Sbjct: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480

Query: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540
            SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT
Sbjct: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540

Query: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600
            SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT
Sbjct: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600

Query: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660
            AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP
Sbjct: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660

Query: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720
            ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI
Sbjct: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720

Query: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780
            FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET
Sbjct: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780

Query: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840
            NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID
Sbjct: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840

Query: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900
            SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT
Sbjct: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900

Query: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960
            VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD
Sbjct: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960

Query: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020
            GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV
Sbjct: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020

Query: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080
            DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR
Sbjct: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080

Query: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1126
            TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP
Sbjct: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1140

[Close]

BLAST of CmoCh05G007880 vs. NCBI nr
Match: KAG7029881.1 (Sister chromatid cohesion 1 protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2125.1 bits (5505), Expect = 0.0e+00
Identity = 1107/1157 (95.68%), Postives = 1113/1157 (96.20%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL
Sbjct: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180

Query: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240
            FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS
Sbjct: 181  FAEKITVKEHDEILDNDVRAPSQSTVLKDTDANMEEILETFETVQDPASTTRRVDECNLS 240

Query: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300
            SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE
Sbjct: 241  SVRDSDGSLKVEDHSTDLEAVGIENNESRKSNIYGGTTDVLGWSSHNDLDYETTRIMHPE 300

Query: 301  ENGHLSNDPKLEQFSLPSEKTKG--------------------------------EYDCS 360
            ENGHLSNDPKLEQFSLP+EKTKG                                EYD S
Sbjct: 301  ENGHLSNDPKLEQFSLPTEKTKGDALGGPITGEEMNNGVVINNEPEMTFLDHVDAEYDRS 360

Query: 361  RSSLDATAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAL 420
            RSSLDATAVSPSCS VTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVA 
Sbjct: 361  RSSLDATAVSPSCSSVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVAP 420

Query: 421  DSTYQEESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480
            DSTYQEESPGRPEVIDAESKEF EPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS
Sbjct: 421  DSTYQEESPGRPEVIDAESKEFQEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRS 480

Query: 481  SLEGESYQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPT 540
            SLEGESYQATDAVT+NLEISE+GGTEVSEDG ASCRGPNKPFGSALSNDICTEISNRSPT
Sbjct: 481  SLEGESYQATDAVTRNLEISEEGGTEVSEDGQASCRGPNKPFGSALSNDICTEISNRSPT 540

Query: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600
            SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT
Sbjct: 541  SDFPAPEKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLT 600

Query: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660
            AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP
Sbjct: 601  AQSFNSAESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRP 660

Query: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720
            ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI
Sbjct: 661  ALRVGTSKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEI 720

Query: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780
            FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET
Sbjct: 721  FSESIYSGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATET 780

Query: 781  NPDAVVDKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840
            NPDAVVDKNDF+SQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID
Sbjct: 781  NPDAVVDKNDFESQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKID 840

Query: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFT 900
            SEAGNIADAVDSFDIKELELPSLVIGDKYDD+NASLQMDISCFSPEKILESQPGVEDTFT
Sbjct: 841  SEAGNIADAVDSFDIKELELPSLVIGDKYDDQNASLQMDISCFSPEKILESQPGVEDTFT 900

Query: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDAD 960
            VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESI DVKLGEIDAD
Sbjct: 901  VESGNVGLDTVNANDCTEIRDNVDDEKPDHNVSLVTSPRENGAKPAESIFDVKLGEIDAD 960

Query: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020
            GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV
Sbjct: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020

Query: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSR 1080
            DTEMTVLD PIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGW   
Sbjct: 1021 DTEMTVLDRPIAEDRGDFEDATVANDIEFLNADDDDEEDEDNEQFAADPSFLENSGW--- 1080

Query: 1081 TRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1126
              AVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP
Sbjct: 1081 --AVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERP 1140

[Close]

BLAST of CmoCh05G007880 vs. TAIR 10
Match: AT5G16270.1 (sister chromatid cohesion 1 protein 4 )

HSP 1 Score: 657.5 bits (1695), Expect = 1.9e-188
Identity = 478/1160 (41.21%), Postives = 642/1160 (55.34%), Query Frame = 0


Query: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
            MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFP+ PIALRLSSHLL
Sbjct: 1    MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61   LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
            LGVVRIYSRKV YLFDDCSEALLK+KQAFRS AVDLPPEESTAPYHSITLPETFDLDDFE
Sbjct: 61   LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVDLPPEESTAPYHSITLPETFDLDDFE 120

Query: 121  LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
            LPDNE++QGNYVDHHVS++EQITLQDTM+GVVY+TSQFGLDERFGDGD SQ  LDLDE +
Sbjct: 121  LPDNEIFQGNYVDHHVSTKEQITLQDTMDGVVYSTSQFGLDERFGDGDTSQAALDLDEAV 180

Query: 181  FAEKITVKEHDE---ILDNDVRAPSQSTVLKDT----------DANMEEI------LETF 240
            F +K  +   DE    +D++    + +  +KD+          D N E++       E  
Sbjct: 181  FQDKDVIGSDDEGVPGIDHNAYLDAAAPGIKDSMEGVSEAMPMDFNEEQVEDLAMNNEFI 240

Query: 241  ETVQDPASTTRRVDECNLSSVRDS---DGSLKVEDHSTDLEAVGIENNESRKSNIYGGTT 300
            E  Q P  T   V+  N SSVR+    D  + VED + +    GI+++    +N      
Sbjct: 241  EDAQAP-QTPGLVEVPNSSSVREQMACDDHMDVEDLNAE---EGIKSSGELNANEMPKRG 300

Query: 301  DVLGWSSHNDLDYETTRI----MHPEENGHLSNDPKLEQFSLPSEKTKGEYDCSRSSLDA 360
            + L  S +N  +   T +       +EN +  N+P         E+ + E+         
Sbjct: 301  EDLS-SEYNAPESAVTPVEVDKSQIDENVNTQNEP---------EEERAEH--------V 360

Query: 361  TAVSPSCSGVTPDLEDFGHKARSDGTYALASEGQLSLKPMDNLVEVLSPRKVALDSTYQE 420
               SP CS +T ++ED G      G   +        KP               D+    
Sbjct: 361  HVTSPCCSHITTEMEDPGQVMNEAGANVVPD------KP---------------DAVPPL 420

Query: 421  ESPGRPEVIDAESKEFLEPKDTETQNSFNGEEITSMEKPVLQACNSHGIERDRSSLEGES 480
            E+PG     + +        + ET +S  G+E  +  +P  Q  N+H  +    +L G  
Sbjct: 421  ETPGEE---NRDHFAIATEVNQETDSSLQGDE-QAYSRPDGQLNNAHETDEQLGNLTG-- 480

Query: 481  YQATDAVTQNLEISEKGGTEVSEDGLASCRGPNKPFGSALSNDICTEISNRSPTSDFPAP 540
               TD                                                 SDFP P
Sbjct: 481  --FTD-------------------------------------------------SDFPPP 540

Query: 541  EKLLSVPEGLTETHGDDLPLYSSLDKGNLAEDDGVSGTKLLSGKKRSFTESTLTAQSFNS 600
            EK+L+VP    +  G+D  + S+ DK +    +  +G   ++GKKR+FTESTLTA+S NS
Sbjct: 541  EKVLAVPN--RQGDGNDFMVESTPDKEDPGTCNDDAGNNNITGKKRTFTESTLTAESLNS 600

Query: 601  AESVGVHRSKRVTESIPDDDDLLSSILVGRRSSVLKMKPSPPMHETISLKRSRPALRVGT 660
             ESVG+ +SKR  +S+PDDDDLLSSILVG +SS LKM+P+P + E  + KR R A R   
Sbjct: 601  VESVGLIQSKRTADSVPDDDDLLSSILVG-KSSFLKMRPTPVL-EPATTKRLRSAPRSTA 660

Query: 661  SKKKVLMDDMMVLHGDTIRHQLTSTEDIRRVRKKAPCTRPEISMIQRQFLEDEIFSESIY 720
            +K+KVLMDD MVLHGD IR QLT+TEDIRRVRKKAPCT PEI M+QRQ LED +F E I+
Sbjct: 661  TKRKVLMDDPMVLHGDIIRQQLTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGLFKEPIF 720

Query: 721  SGISKELSSLHAEAFNLSEIRVYEKDPVGASTEAGNNFESAVRPNTTEESATETNPDAVV 780
            +G+S EL SLH E ++L  I + E D   AS  A  + E +V     EE+ TE + D   
Sbjct: 721  TGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNECSV--TAVEENKTEESSDPQA 780

Query: 781  DKNDFKSQPSRATIQIETQELALECPDLDVQDQQQVTSTENAGLEPVGEREKIDSEAGNI 840
              ND + QP  A    + ++   +  +L  +D  ++   E + LE + E      E   +
Sbjct: 781  HPNDCEEQPGTAHTHPQEEQTINQQEEL--KDDNEL--AEKSDLEVLKEGNGAADEVNLV 840

Query: 841  A-DAVDSFDIKEL--ELPSLVIGDKYDDRNASLQMDISCFSPEKILESQPGVEDTFTVES 900
              D V     +E    +  L + + +++ +     D+ C  P     ++    D   +  
Sbjct: 841  VIDDVSQIPSEEKLDRVEDLQVEESHENHDGEGGQDV-CADP-----NEKSCTDVIEIAE 900

Query: 901  GNVGLDTVNANDCTEIRDNV--DDEKPDHNVSLVTSPRENGAKPAESILDVKLGEIDA-D 960
            G+  ++ +      ++ D +  +DEK D +  +    R++      ++   + G ++A D
Sbjct: 901  GDTDINPIFNEMDLKVEDELPHEDEKTDASAEVSELGRDDQTPCDNTVGSTETGCLEAGD 960

Query: 961  GVNTADFVCGEKDGASLCLIDGAQMDSQYSPGFDMDFKSTSFNEVVNPSYPEEADLLDIV 1020
              N A   C E             +    S G + + +S +  E  N    EEA + + +
Sbjct: 961  LSNMALENCNE------------PLVEANSDGLNPETESYNKYEPHNEMSNEEASMQNAL 1020

Query: 1021 DTEMTVLDHPIAEDRGDFEDATVANDIEFLNADD---DDEEDEDNEQFAADPSFLENSGW 1080
            D E T  D  +  D  + +    A+D  FLN DD   D++ +ED+ Q+  +   LENSGW
Sbjct: 1021 DGEHTSRD-GLMGDNDEMDTMENAHDTGFLNVDDDEVDEDHEEDDIQYDDETRLLENSGW 1031

Query: 1081 SSRTRAVARYLQNLFDRDSVHGRKVLHMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQ 1126
            SSRTRAVA+YLQ LFD+++ +G+ VL  D LL  KTRKEASRMFFETLVLKT+DY+ VEQ
Sbjct: 1081 SSRTRAVAKYLQTLFDKETENGKNVLVADKLLAGKTRKEASRMFFETLVLKTRDYIQVEQ 1031

[Close]

BLAST of CmoCh05G007880 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 150.6 bits (379), Expect = 7.5e-36
Identity = 95/234 (40.60%), Postives = 138/234 (58.97%), Query Frame = 0


Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
           MFYS  +LA+KGPLGT+W AAH+ ++L+K+Q    +I  +VD+I+FP+VP+ALR SSHLL
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE 120
           +GVVRIYS+KV YL++D +     + +AF ST V+LP +   AP  S+TLP+  +LD+F+
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNLDEFD 120

Query: 121 LPDNELYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLDEEL 180
           L D+ L      D+H  S E ITL D +   +        DE   D  +  I +D+D+  
Sbjct: 121 LEDDTL--DMEFDNHTRSEEDITLTDQIPTGIDPYVAVTFDE---DIISESIPMDVDQST 180

Query: 181 -----FAEKITVK-EHDEILDNDVRAPSQSTVLKDTDA-NMEEILETFETVQDP 228
                   +I V+  H+   DN+   P  S +  DT   +   + E F  VQDP
Sbjct: 181 EPVSRHTGEIDVETAHETGPDNE---PRDSNIAFDTGTYSPRNVTEEFTEVQDP 226

HSP 2 Score: 59.7 bits (143), Expect = 1.7e-08
Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 1037 PSFLENSGWSSRTRAVARYLQNLFDRD---SVHGRKVLHMDNLLVNKTRKEASRMFFETL 1096
            P+  +++  + R RA+A+YL+         S H    L +  +L  KTRK A+RMFFETL
Sbjct: 601  PASQDSAALTGRARALAQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETL 660

Query: 1097 VLKTKDYLHVEQERPFDNISLK 1116
            VLK++  + ++Q+RP+ +I+LK
Sbjct: 661  VLKSRGLIDMQQDRPYGDIALK 682

[Close]

BLAST of CmoCh05G007880 vs. TAIR 10
Match: AT5G40840.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 117.9 bits (294), Expect = 5.4e-26
Identity = 73/173 (42.20%), Postives = 106/173 (61.27%), Query Frame = 0


Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDV-PIALRLSSHL 60
           MFYS  ++++KGPLG IW+AA+  +KL+K+QV  T I  SVD IL  ++  +  R+ ++L
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGVVRIYSRKVGYLFDDCSEALLKIKQAF------RSTAVDLPPEESTAPYHSITLPET 120
           LLGVVRIYS+KV +LFDDC++AL+ +K+          T V LP   ++    SI LPE 
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLP---ASIECFSIALPER 120

Query: 121 FDLDDFELPDNELYQGNYVDHHVSSREQITL----QDTMEGVVYTTSQFGLDE 163
           F+LD F+L   E + G  V  H    E ITL    Q+T    +Y+  +F ++E
Sbjct: 121 FELDAFDLGVLEDFHGGNVKPH----EDITLKDGSQETERMDMYSMERFDMEE 166

HSP 2 Score: 55.5 bits (132), Expect = 3.3e-07
Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 1014 DIEFLNADDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLF--DRDSVHGRKVL 1073
            D++ +  +D+   DE  +        L+   WSSRTR VA++L+  F   R+     KV 
Sbjct: 706  DLDTILMNDEVNADERQD--------LQQETWSSRTRNVAKFLEKTFLEQREREEEEKV- 765

Query: 1074 HMDNLLVNKTRKEASRMFFETLVLKTKDYLHVEQERPFDNISL 1115
             +  L   +T+KE++R+F+ETLVLKTK Y+ V+Q  P+ ++ L
Sbjct: 766  SLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFL 799

[Close]

BLAST of CmoCh05G007880 vs. TAIR 10
Match: AT5G40840.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 117.9 bits (294), Expect = 5.4e-26
Identity = 73/173 (42.20%), Postives = 106/173 (61.27%), Query Frame = 0


Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDV-PIALRLSSHL 60
           MFYS  ++++KGPLG IW+AA+  +KL+K+QV  T I  SVD IL  ++  +  R+ ++L
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGVVRIYSRKVGYLFDDCSEALLKIKQAF------RSTAVDLPPEESTAPYHSITLPET 120
           LLGVVRIYS+KV +LFDDC++AL+ +K+          T V LP   ++    SI LPE 
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLP---ASIECFSIALPER 120

Query: 121 FDLDDFELPDNELYQGNYVDHHVSSREQITL----QDTMEGVVYTTSQFGLDE 163
           F+LD F+L   E + G  V  H    E ITL    Q+T    +Y+  +F ++E
Sbjct: 121 FELDAFDLGVLEDFHGGNVKPH----EDITLKDGSQETERMDMYSMERFDMEE 166

HSP 2 Score: 56.6 bits (135), Expect = 1.5e-07
Identity = 38/98 (38.78%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 1019 NADDDDEEDEDNEQFAADPSFLENSGWSSRTRAVARYLQNLF--DRDSVHGRKVLHMDNL 1078
            N D D     D +  A +   L+   WSSRTR VA++L+  F   R+     KV  +  L
Sbjct: 704  NRDLDTILMNDEQVNADERQDLQQETWSSRTRNVAKFLEKTFLEQREREEEEKV-SLLQL 763

Query: 1079 LVNKTRKEASRMFFETLVLKTKDYLHVEQERPFDNISL 1115
               +T+KE++R+F+ETLVLKTK Y+ V+Q  P+ ++ L
Sbjct: 764  CRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFL 800

[Close]

BLAST of CmoCh05G007880 vs. TAIR 10
Match: AT5G05490.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 100.5 bits (249), Expect = 8.9e-21
Identity = 61/139 (43.88%), Postives = 84/139 (60.43%), Query Frame = 0


Query: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL 60
           MFYS  +LA+K PLG IW+AA L  K+ + ++   DI    + IL P VP+ALRLS  L+
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILM 60

Query: 61  LGVVRIYSRKVGYLFDDCSEALLKIKQAFRSTAVD----LPPEESTAPYHSITLPETFDL 120
            GVV +Y RKV  LFDD +  L++I  A+R+ +V     LP  ++ A   ++TLPE  + 
Sbjct: 61  GGVVIVYERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEA 120

Query: 121 D--DFELPDNELYQGNYVD 134
           D  DFE   N    GNY+D
Sbjct: 121 DFGDFEQTRNVPKFGNYMD 139

The following BLAST results are available for this feature:

BLAST of CmoCh05G007880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W1Y0	2.7e-187	41.21	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE...	[more]
Q9FQ19	1.1e-34	40.60	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE...	[more]
O93310	3.8e-32	45.83	Double-strand-break repair protein rad21 homolog OS=Xenopus laevis OX=8355 GN=ra...	[more]
O60216	4.9e-32	45.83	Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD2...	[more]
Q61550	8.4e-32	40.19	Double-strand-break repair protein rad21 homolog OS=Mus musculus OX=10090 GN=Rad...	[more]

BLAST of CmoCh05G007880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPE1	0.0e+00	100.00	sister chromatid cohesion 1 protein 4-like isoform X3 OS=Cucurbita moschata OX=3...	[more]
A0A6J1ENB7	0.0e+00	97.23	sister chromatid cohesion 1 protein 4-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1EST0	0.0e+00	96.72	sister chromatid cohesion 1 protein 4-like isoform X2 OS=Cucurbita moschata OX=3...	[more]
A0A6J1KCF1	0.0e+00	96.63	sister chromatid cohesion 1 protein 4-like isoform X3 OS=Cucurbita maxima OX=366...	[more]
A0A6J1K641	0.0e+00	93.97	sister chromatid cohesion 1 protein 4-like isoform X1 OS=Cucurbita maxima OX=366...	[more]

BLAST of CmoCh05G007880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929654.1	0.0e+00	100.00	sister chromatid cohesion 1 protein 4-like isoform X3 [Cucurbita moschata]	[more]
XP_022929652.1	0.0e+00	97.23	sister chromatid cohesion 1 protein 4-like isoform X1 [Cucurbita moschata]	[more]
KAG6598927.1	0.0e+00	98.93	Sister chromatid cohesion 1 protein 4, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022929653.1	0.0e+00	96.72	sister chromatid cohesion 1 protein 4-like isoform X2 [Cucurbita moschata]	[more]
KAG7029881.1	0.0e+00	95.68	Sister chromatid cohesion 1 protein 4, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of CmoCh05G007880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16270.1	1.9e-188	41.21	sister chromatid cohesion 1 protein 4	[more]
AT3G59550.1	7.5e-36	40.60	Rad21/Rec8-like family protein	[more]
AT5G40840.1	5.4e-26	42.20	Rad21/Rec8-like family protein	[more]
AT5G40840.2	5.4e-26	42.20	Rad21/Rec8-like family protein	[more]
AT5G05490.2	8.9e-21	43.88	Rad21/Rec8-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	PFAM	PF04824	Rad21_Rec8	coord: 1070..1118 e-value: 3.6E-18 score: 64.6
IPR023093	ScpA-like, C-terminal	GENE3D	1.10.10.580	Structural maintenance of chromosome 1. Chain E	coord: 1047..1124 e-value: 1.0E-16 score: 62.4
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 1..101 e-value: 1.2E-36 score: 125.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 722..760
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 727..751
None	No IPR available	PANTHER	PTHR12585:SF29	FI11703P	coord: 1..1123
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 1..1123
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 1048..1121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G007880.1	CmoCh05G007880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007064	mitotic sister chromatid cohesion
biological_process	GO:1990414	replication-born double-strand break repair via sister chromatid exchange
biological_process	GO:0007130	synaptonemal complex assembly
biological_process	GO:0007062	sister chromatid cohesion
cellular_component	GO:0034991	nuclear meiotic cohesin complex
cellular_component	GO:0034990	nuclear mitotic cohesin complex
cellular_component	GO:0000795	synaptonemal complex
cellular_component	GO:0008278	cohesin complex
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005515	protein binding