CmoCh05G006190 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G006190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	dehydration-responsive element-binding protein 3-like
Location	Cmo_Chr05: 3104970 .. 3105596 (-)
RNA-Seq Expression	CmoCh05G006190
Synteny	CmoCh05G006190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGAAACGAAAACGCCACAACAACGTGTTCATCTCCGGAGCCGAACAAGAAGCCCAAACGCATCAGAGACACAGAGGACTCGAAGCACCCGCTTTACAGAGGCGTCCGAATGAGAAATTGGGGGAAATGGGTGTCCGAAATTCGTGAGCCAAGAAAGAAATCCCGCATTTGGTTAGGCACTTTCCCCAGCCCTGAAATGGCTGCACGAGCCCACGATGTAGCCGCCTTAAGCATCAAAGGAAAAGCCGCAATCCTTAATTTCCCCGACCTGGTACACCTCCTACCCCGCCCTGTTTCACTCGCCCCTCGCGACGTTCAGGCCGCCGCCGCTAAAGCCGCTCGTATGCATCATTTCTCCTCTACTCATACTAATAACAACAATTCCTCCTCCTCCTCCTCCTCCGATGCCACCGATGAGCTCACGGAAATCGTCCAGCTACCGAGTCTCGGAACGAGTTACGACGGCGGCGACGGCGGATTCGGTGGTGAGTTTGTGTTTTTTGACTCGGGGCAGGAATTGGAATCTGGGTGTTGGATGTACACGCCGCCATGGGTGCAGAGCTTGGAGGATTGTGATAATGATGATTATGGTAAGTTCGAAGGATTGCTGTGGGATTATTGA

mRNA sequence

ATGAGCAGAAACGAAAACGCCACAACAACGTGTTCATCTCCGGAGCCGAACAAGAAGCCCAAACGCATCAGAGACACAGAGGACTCGAAGCACCCGCTTTACAGAGGCGTCCGAATGAGAAATTGGGGGAAATGGGTGTCCGAAATTCGTGAGCCAAGAAAGAAATCCCGCATTTGGTTAGGCACTTTCCCCAGCCCTGAAATGGCTGCACGAGCCCACGATGTAGCCGCCTTAAGCATCAAAGGAAAAGCCGCAATCCTTAATTTCCCCGACCTGGTACACCTCCTACCCCGCCCTGTTTCACTCGCCCCTCGCGACGTTCAGGCCGCCGCCGCTAAAGCCGCTCGTATGCATCATTTCTCCTCTACTCATACTAATAACAACAATTCCTCCTCCTCCTCCTCCTCCGATGCCACCGATGAGCTCACGGAAATCGTCCAGCTACCGAGTCTCGGAACGAGTTACGACGGCGGCGACGGCGGATTCGGTGGTGAGTTTGTGTTTTTTGACTCGGGGCAGGAATTGGAATCTGGGTGTTGGATGTACACGCCGCCATGGGTGCAGAGCTTGGAGGATTGTGATAATGATGATTATGGTAAGTTCGAAGGATTGCTGTGGGATTATTGA

Coding sequence (CDS)

ATGAGCAGAAACGAAAACGCCACAACAACGTGTTCATCTCCGGAGCCGAACAAGAAGCCCAAACGCATCAGAGACACAGAGGACTCGAAGCACCCGCTTTACAGAGGCGTCCGAATGAGAAATTGGGGGAAATGGGTGTCCGAAATTCGTGAGCCAAGAAAGAAATCCCGCATTTGGTTAGGCACTTTCCCCAGCCCTGAAATGGCTGCACGAGCCCACGATGTAGCCGCCTTAAGCATCAAAGGAAAAGCCGCAATCCTTAATTTCCCCGACCTGGTACACCTCCTACCCCGCCCTGTTTCACTCGCCCCTCGCGACGTTCAGGCCGCCGCCGCTAAAGCCGCTCGTATGCATCATTTCTCCTCTACTCATACTAATAACAACAATTCCTCCTCCTCCTCCTCCTCCGATGCCACCGATGAGCTCACGGAAATCGTCCAGCTACCGAGTCTCGGAACGAGTTACGACGGCGGCGACGGCGGATTCGGTGGTGAGTTTGTGTTTTTTGACTCGGGGCAGGAATTGGAATCTGGGTGTTGGATGTACACGCCGCCATGGGTGCAGAGCTTGGAGGATTGTGATAATGATGATTATGGTAAGTTCGAAGGATTGCTGTGGGATTATTGA

Protein sequence

MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHFSSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY

Homology

[Close]

BLAST of CmoCh05G006190 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-52
Identity = 123/226 (54.42%), Postives = 150/226 (66.37%), Query Frame = 0


Query: 2   SRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLG 61
           S +++ +    + +  KK KR RD+   KHP+YRGVRMRNWGKWVSEIREPRKKSRIWLG
Sbjct: 21  SESDSVSDKSKAEQSEKKTKRGRDS--GKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLG 80

Query: 62  TFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMH--- 121
           TFP+PEMAARAHDVAALSIKG AAILNFP+L    PRPVSL+PRD+Q AA KAA M    
Sbjct: 81  TFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTT 140

Query: 122 HFSSTHTNNNNSSSSSSSDA-----------TDELTEIVQLPSLGTSYDGGDGGFGGEFV 181
            FSS+ +++++ SS+SS ++           ++EL EIV+LPSLG SYD      G EFV
Sbjct: 141 SFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFV 200

Query: 182 FFDSGQELESGCWMYTPPWVQSLEDCDNDDYGK------FEGLLWD 208
           F+DS         +Y PPW QS E    D+YG         GL WD
Sbjct: 201 FYDSVDYC-----LYPPPWGQSSE----DNYGHGISPNFGHGLSWD 235

[Close]

BLAST of CmoCh05G006190 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.5e-47
Identity = 110/184 (59.78%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 15  EPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHD 74
           + N++ K+    +  KHP+YRGVR RNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHD
Sbjct: 17  QENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHD 76

Query: 75  VAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARM---HHFSS----THTNN 134
           VAALSIKG +AILNFPDL    PRP SL+PRD+Q AA KAA M     FSS    T +++
Sbjct: 77  VAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSS 136

Query: 135 NNSSS-----SSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCWMY 187
            +SSS     SSS+  ++EL EIV+LPSLG+SYDG     G EF+F DS     +  W Y
Sbjct: 137 QSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLT-QLGNEFIFSDS-----ADLWPY 194

[Close]

BLAST of CmoCh05G006190 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.7e-43
Identity = 105/195 (53.85%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 27  EDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGKAAI 86
           E++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFP+ EMA RAHDVAA+SIKG +AI
Sbjct: 12  ENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAI 71

Query: 87  LNFPDLVHLLPRPVSLAPRDVQAAAAKAARMH----------HFSSTHTNNNNSSSSSS- 146
           LNFP+L  LLPRPVSL+PRDV+AAA KAA M             S T T+N  S SS S 
Sbjct: 72  LNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSESSESN 131

Query: 147 ------------------SDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELES 193
                             S  +D+L EIV+LPSLGTS +  +     EFV FDS ++L  
Sbjct: 132 ETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESN-----EFVIFDSLEDL-- 191

[Close]

BLAST of CmoCh05G006190 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.7e-36
Identity = 100/221 (45.25%), Postives = 129/221 (58.37%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           M  +  + T CSS +  +K K        +  +YRG RMR+WGKWVSEIREPRKKSRIWL
Sbjct: 1   MVDSHGSDTECSSKKKKEKTK--------EKGVYRGARMRSWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARM--- 120
           GTFP+ EMAARAHDVAALSIKG +AILNFP+L   LPRPVSL+ +D+QAAAA+AA M   
Sbjct: 61  GTFPTAEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFK 120

Query: 121 --------------------------HHFSSTHTNNNNSSSSSSSDATDELTEIVQLPSL 180
                                        SS  +++++SSSSSSS  + EL +IV+LPSL
Sbjct: 121 TVPFHLQDDSTPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSL 180

Query: 181 GTSYDGGDGGFGGEFVFFDSGQELESGCWMYTPPWVQSLED 193
                  +     +   +DS + L S      PPW+ + E+
Sbjct: 181 -------ENNVKYDCALYDSLEGLVS-----MPPWLDATEN 201

[Close]

BLAST of CmoCh05G006190 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.8e-36
Identity = 96/178 (53.93%), Postives = 112/178 (62.92%), Query Frame = 0


Query: 21  KRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSI 80
           KR+R       P YRGVRMR WGKWVSEIREPRKKSRIWLGTF +PEMAARAHD AAL+I
Sbjct: 35  KRVR-----SDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTI 94

Query: 81  KGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHH--------------------- 140
           KG +A+LNFP+L   LPRP S +PRDVQAAAA AA M                       
Sbjct: 95  KGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAET 154

Query: 141 --FSSTHTNNNNSSSSSSSD----ATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDS 172
              SS+++   +SS S SS+      +EL+EIV+LPSL TSYD        EFV+ DS
Sbjct: 155 QLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYDES----LSEFVYVDS 203

[Close]

BLAST of CmoCh05G006190 vs. ExPASy TrEMBL
Match: A0A6J1HCS5 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462803 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120

Query: 121 SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW 180
           SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW
Sbjct: 121 SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW 180

Query: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           MYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 208

[Close]

BLAST of CmoCh05G006190 vs. ExPASy TrEMBL
Match: A0A6J1K2D0 (dehydration-responsive element-binding protein 3-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111491786 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.8e-104
Identity = 195/208 (93.75%), Postives = 198/208 (95.19%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNENA TTCSSPEPNKK KRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENA-TTCSSPEPNKKLKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAA KAA M+HF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAATKAAHMNHF 120

Query: 121 SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW 180
           SST TNNNNSSSSSSSDAT+ELTEIVQLPSLGTS+DGG    GGE VFFDSGQELESGCW
Sbjct: 121 SSTDTNNNNSSSSSSSDATEELTEIVQLPSLGTSFDGGG---GGELVFFDSGQELESGCW 180

Query: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           MYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 204

[Close]

BLAST of CmoCh05G006190 vs. ExPASy TrEMBL
Match: A0A6J1K578 (dehydration-responsive element-binding protein 3-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111491786 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102
Identity = 195/209 (93.30%), Postives = 198/209 (94.74%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNENA TTCSSPEPNKK KRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENA-TTCSSPEPNKKLKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAA KAA M+HF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAATKAAHMNHF 120

Query: 121 SSTHTNNNN-SSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGC 180
           SST TNNNN SSSSSSSDAT+ELTEIVQLPSLGTS+DGG    GGE VFFDSGQELESGC
Sbjct: 121 SSTDTNNNNSSSSSSSSDATEELTEIVQLPSLGTSFDGGG---GGELVFFDSGQELESGC 180

Query: 181 WMYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           WMYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 WMYTPPWVQSLEDCDNDDYGKFEGLLWDY 205

[Close]

BLAST of CmoCh05G006190 vs. ExPASy TrEMBL
Match: A0A6J1K958 (dehydration-responsive element-binding protein 3-like isoform X6 OS=Cucurbita maxima OX=3661 GN=LOC111491786 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.3e-102
Identity = 194/208 (93.27%), Postives = 197/208 (94.71%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNENA TTCSSPEPNKK KRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENA-TTCSSPEPNKKLKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAA KAA M+HF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAATKAAHMNHF 120

Query: 121 SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW 180
           SST TNNNN SSSSSSDAT+ELTEIVQLPSLGTS+DGG    GGE VFFDSGQELESGCW
Sbjct: 121 SSTDTNNNN-SSSSSSDATEELTEIVQLPSLGTSFDGGG---GGELVFFDSGQELESGCW 180

Query: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           MYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 203

[Close]

BLAST of CmoCh05G006190 vs. ExPASy TrEMBL
Match: A0A6J1K785 (dehydration-responsive element-binding protein 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491786 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.3e-102
Identity = 195/214 (91.12%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNENA TTCSSPEPNKK KRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENA-TTCSSPEPNKKLKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAA KAA M+HF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAATKAAHMNHF 120

Query: 121 SSTHTNNNN------SSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQE 180
           SST TNNNN      SSSSSSSDAT+ELTEIVQLPSLGTS+DGG    GGE VFFDSGQE
Sbjct: 121 SSTDTNNNNSSSSSSSSSSSSSDATEELTEIVQLPSLGTSFDGGG---GGELVFFDSGQE 180

Query: 181 LESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           LESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 LESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY 210

[Close]

BLAST of CmoCh05G006190 vs. NCBI nr
Match: XP_022962316.1 (dehydration-responsive element-binding protein 3-like [Cucurbita moschata])

HSP 1 Score: 425.6 bits (1093), Expect = 2.4e-115
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120

Query: 121 SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW 180
           SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW
Sbjct: 121 SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW 180

Query: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           MYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 208

[Close]

BLAST of CmoCh05G006190 vs. NCBI nr
Match: KAG7029718.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.9 bits (1060), Expect = 1.6e-111
Identity = 205/213 (96.24%), Postives = 205/213 (96.24%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNEN TTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENGTTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAA M HF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHMQHF 120

Query: 121 SSTHTNNNN-----SSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQEL 180
           SSTHTNNNN     SSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQEL
Sbjct: 121 SSTHTNNNNSSSSSSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQEL 180

Query: 181 ESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           ESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 ESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY 213

[Close]

BLAST of CmoCh05G006190 vs. NCBI nr
Match: KAG6598779.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.4 bits (1056), Expect = 4.7e-111
Identity = 205/217 (94.47%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNEN TTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENGTTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAA M HF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHMQHF 120

Query: 121 SSTHTNNNN---------SSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDS 180
           SSTHTNNNN         SSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDS
Sbjct: 121 SSTHTNNNNSSSSSSSSSSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDS 180

Query: 181 GQELESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           GQELESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 GQELESGCWMYTPPWVQSLEDCDNDDYGKFEGLLWDY 217

[Close]

BLAST of CmoCh05G006190 vs. NCBI nr
Match: XP_023546365.1 (ethylene-responsive transcription factor TINY-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.1 bits (1019), Expect = 9.2e-107
Identity = 199/209 (95.22%), Postives = 200/209 (95.69%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MS NENATTTCSSPEPNKKPKRIRDTEDS HPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 76  MSINENATTTCSSPEPNKKPKRIRDTEDSNHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 135

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAA MHHF
Sbjct: 136 GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHMHHF 195

Query: 121 SSTHTNNNN-SSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGC 180
           SSTHTNNNN SSSSSSSDATDELTEIVQLP+LGTSY   DGGFGGEFVFFDSGQELESGC
Sbjct: 196 SSTHTNNNNSSSSSSSSDATDELTEIVQLPTLGTSY---DGGFGGEFVFFDSGQELESGC 255

Query: 181 WMYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           WMY PPWVQSL DCDNDDYGKFEGLLWDY
Sbjct: 256 WMYAPPWVQSLGDCDNDDYGKFEGLLWDY 281

[Close]

BLAST of CmoCh05G006190 vs. NCBI nr
Match: XP_022996592.1 (dehydration-responsive element-binding protein 3-like isoform X4 [Cucurbita maxima] >XP_022996593.1 dehydration-responsive element-binding protein 3-like isoform X5 [Cucurbita maxima])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 195/208 (93.75%), Postives = 198/208 (95.19%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           MSRNENA TTCSSPEPNKK KRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL
Sbjct: 1   MSRNENA-TTCSSPEPNKKLKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHHF 120
           GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAA KAA M+HF
Sbjct: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAATKAAHMNHF 120

Query: 121 SSTHTNNNNSSSSSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCW 180
           SST TNNNNSSSSSSSDAT+ELTEIVQLPSLGTS+DGG    GGE VFFDSGQELESGCW
Sbjct: 121 SSTDTNNNNSSSSSSSDATEELTEIVQLPSLGTSFDGGG---GGELVFFDSGQELESGCW 180

Query: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 209
           MYTPPWVQSLEDCDNDDYGKFEGLLWDY
Sbjct: 181 MYTPPWVQSLEDCDNDDYGKFEGLLWDY 204

[Close]

BLAST of CmoCh05G006190 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 205.7 bits (522), Expect = 3.7e-53
Identity = 123/226 (54.42%), Postives = 150/226 (66.37%), Query Frame = 0


Query: 2   SRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLG 61
           S +++ +    + +  KK KR RD+   KHP+YRGVRMRNWGKWVSEIREPRKKSRIWLG
Sbjct: 21  SESDSVSDKSKAEQSEKKTKRGRDS--GKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLG 80

Query: 62  TFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMH--- 121
           TFP+PEMAARAHDVAALSIKG AAILNFP+L    PRPVSL+PRD+Q AA KAA M    
Sbjct: 81  TFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTT 140

Query: 122 HFSSTHTNNNNSSSSSSSDA-----------TDELTEIVQLPSLGTSYDGGDGGFGGEFV 181
            FSS+ +++++ SS+SS ++           ++EL EIV+LPSLG SYD      G EFV
Sbjct: 141 SFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFV 200

Query: 182 FFDSGQELESGCWMYTPPWVQSLEDCDNDDYGK------FEGLLWD 208
           F+DS         +Y PPW QS E    D+YG         GL WD
Sbjct: 201 FYDSVDYC-----LYPPPWGQSSE----DNYGHGISPNFGHGLSWD 235

[Close]

BLAST of CmoCh05G006190 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 188.7 bits (478), Expect = 4.6e-48
Identity = 110/184 (59.78%), Postives = 130/184 (70.65%), Query Frame = 0


Query: 15  EPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHD 74
           + N++ K+    +  KHP+YRGVR RNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHD
Sbjct: 17  QENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHD 76

Query: 75  VAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARM---HHFSS----THTNN 134
           VAALSIKG +AILNFPDL    PRP SL+PRD+Q AA KAA M     FSS    T +++
Sbjct: 77  VAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSS 136

Query: 135 NNSSS-----SSSSDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELESGCWMY 187
            +SSS     SSS+  ++EL EIV+LPSLG+SYDG     G EF+F DS     +  W Y
Sbjct: 137 QSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLT-QLGNEFIFSDS-----ADLWPY 194

[Close]

BLAST of CmoCh05G006190 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 4.0e-44
Identity = 105/195 (53.85%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 27  EDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGKAAI 86
           E++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFP+ EMA RAHDVAA+SIKG +AI
Sbjct: 12  ENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAI 71

Query: 87  LNFPDLVHLLPRPVSLAPRDVQAAAAKAARMH----------HFSSTHTNNNNSSSSSS- 146
           LNFP+L  LLPRPVSL+PRDV+AAA KAA M             S T T+N  S SS S 
Sbjct: 72  LNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSESSESN 131

Query: 147 ------------------SDATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDSGQELES 193
                             S  +D+L EIV+LPSLGTS +  +     EFV FDS ++L  
Sbjct: 132 ETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESN-----EFVIFDSLEDL-- 191

[Close]

BLAST of CmoCh05G006190 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 4.8e-37
Identity = 100/221 (45.25%), Postives = 129/221 (58.37%), Query Frame = 0


Query: 1   MSRNENATTTCSSPEPNKKPKRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWL 60
           M  +  + T CSS +  +K K        +  +YRG RMR+WGKWVSEIREPRKKSRIWL
Sbjct: 1   MVDSHGSDTECSSKKKKEKTK--------EKGVYRGARMRSWGKWVSEIREPRKKSRIWL 60

Query: 61  GTFPSPEMAARAHDVAALSIKGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARM--- 120
           GTFP+ EMAARAHDVAALSIKG +AILNFP+L   LPRPVSL+ +D+QAAAA+AA M   
Sbjct: 61  GTFPTAEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFK 120

Query: 121 --------------------------HHFSSTHTNNNNSSSSSSSDATDELTEIVQLPSL 180
                                        SS  +++++SSSSSSS  + EL +IV+LPSL
Sbjct: 121 TVPFHLQDDSTPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSL 180

Query: 181 GTSYDGGDGGFGGEFVFFDSGQELESGCWMYTPPWVQSLED 193
                  +     +   +DS + L S      PPW+ + E+
Sbjct: 181 -------ENNVKYDCALYDSLEGLVS-----MPPWLDATEN 201

[Close]

BLAST of CmoCh05G006190 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-37
Identity = 96/178 (53.93%), Postives = 112/178 (62.92%), Query Frame = 0


Query: 21  KRIRDTEDSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSI 80
           KR+R       P YRGVRMR WGKWVSEIREPRKKSRIWLGTF +PEMAARAHD AAL+I
Sbjct: 35  KRVR-----SDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTI 94

Query: 81  KGKAAILNFPDLVHLLPRPVSLAPRDVQAAAAKAARMHH--------------------- 140
           KG +A+LNFP+L   LPRP S +PRDVQAAAA AA M                       
Sbjct: 95  KGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAET 154

Query: 141 --FSSTHTNNNNSSSSSSSD----ATDELTEIVQLPSLGTSYDGGDGGFGGEFVFFDS 172
              SS+++   +SS S SS+      +EL+EIV+LPSL TSYD        EFV+ DS
Sbjct: 155 QLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYDES----LSEFVYVDS 203

The following BLAST results are available for this feature:

BLAST of CmoCh05G006190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	5.1e-52	54.42	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	6.5e-47	59.78	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M080	5.7e-43	53.85	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q52QU1	6.7e-36	45.25	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	8.8e-36	53.93	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmoCh05G006190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCS5	1.2e-115	100.00	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1K2D0	7.8e-104	93.75	dehydration-responsive element-binding protein 3-like isoform X4 OS=Cucurbita ma...	[more]
A0A6J1K578	1.9e-102	93.30	dehydration-responsive element-binding protein 3-like isoform X3 OS=Cucurbita ma...	[more]
A0A6J1K958	4.3e-102	93.27	dehydration-responsive element-binding protein 3-like isoform X6 OS=Cucurbita ma...	[more]
A0A6J1K785	7.3e-102	91.12	dehydration-responsive element-binding protein 3-like isoform X2 OS=Cucurbita ma...	[more]

BLAST of CmoCh05G006190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962316.1	2.4e-115	100.00	dehydration-responsive element-binding protein 3-like [Cucurbita moschata]	[more]
KAG7029718.1	1.6e-111	96.24	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
KAG6598779.1	4.7e-111	94.47	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
XP_023546365.1	9.2e-107	95.22	ethylene-responsive transcription factor TINY-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996592.1	1.6e-103	93.75	dehydration-responsive element-binding protein 3-like isoform X4 [Cucurbita maxi...	[more]

BLAST of CmoCh05G006190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	3.7e-53	54.42	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	4.6e-48	59.78	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	4.0e-44	53.85	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	4.8e-37	45.25	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	6.3e-37	53.93	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 56..72 score: 61.71 coord: 34..45 score: 71.21
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 33..96 e-value: 6.5E-34 score: 128.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 32..82 e-value: 1.6E-13 score: 50.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 33..90 score: 23.221937
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 32..92 e-value: 5.58437E-32 score: 108.513
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 33..91 e-value: 9.2E-24 score: 85.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR31985:SF220	DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED	coord: 12..208
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 12..208
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 33..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G006190.1	CmoCh05G006190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity