CmoCh05G005580 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G005580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein CutA
Location	Cmo_Chr05: 2699874 .. 2702894 (+)
RNA-Seq Expression	CmoCh05G005580
Synteny	CmoCh05G005580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGAAGGCATCAAGTAAGCTCAAGCCGGAGCGTTGAAAAGGCGCGACAGGATTAGCGCTATAAAAGCGAAATGGCCTTTACTCTCTGCAGCAGAGTCGCGACTCCATTGCTATCATCCTCAGTCCTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTAGGATTCTCCAATCTCTTCGTCTCCAGAACGGGTTCCGCTCTGTCGCTGCCTTTCGCACCTCTCTTGAGGTACTTCTTTTCGCCGATTCATTTCTTCCACGATTGTTTCTTGCTGTGAATTTGCTTTTGTTGCTGGTTATTTTGTTTAGATTCTTTATTTGATTTGTATTCTTGTTGATTTGCTAACGGAAAACGTATATCAGATCGACGTTTGGTAGTCAAGGACCTGCTAGGAACGTGCATTTGATAAAAATGGAAGGGAATAGTGCCGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTTCTATATTTTCTCTCTGCTCTAGAAGTCTAGCGTTATTTTGCGGTTTGGAATTCATTGATCGTTCACTGGTATCTTGAAAAATTGGAACAATATATATAATCGGATTAGCATAGATATTTTTCGTTGCTATGCCTTTTGTCTTGAGGTTTCCAATATCTCGTGTTCGGCATTTGACTTGGTTGCTTGTCAGTCAATCTAGTGTCAGGCTCTTCTAGCAGCGGTATATACACTTTGGTTGATGGTAACATAGTTGTATGTTGATCGAGTAGTATGGGAATTGACGATATGGTTTCAGTATTGAACTTCTTATGCTAGTAATGTCTTCACTGTACTTGGCTACGATGGAGTCGAGTGTTGATACTTGATAGGATCTTGTTGATTATGATTTAGACATATATATACTTGGCGCATTGTACTAATAATGACCAGACTCGGTAGGCCGATGATGAAGTATATTGTAGCTTAGGAAATGCTGTAATGTATATATATTATTGTTGAATATATAGCATGTGTTCTTATCCAAGAACAAAAAAGAATATGTAGCATGGTTTGTTTTCTTCTGGTATTAAAGAAGGTTTAGCAGTAACCGACTCACTTGGATGATTAATGTTCTAAGATAATAAGGGCCTTTTTGGAATTTAATATGGAGTATGTTTTATGCTTTCGAATTCTCTTGGTTAAATGGGTTCAGTAAATATCTGTTTGGCATATATTTCTCTAAACGGTTTGTGAATTTAGTGATCCAAATTGTAGAAATTCTAAAATCAAATATTTATGCCGGTGTATCCAATTTTGAGTTTGAAATTTCAAAATCCAGAATTATATTAACTACTCCATTGTTGTTAAAATTAAATTAATATAATAAATTAATCCAATGTTTCATATTCCAATCCAATAAGTTCCTCTATTTTTTCCGTTGTGACCACTTTCTTCTATTTATTTTTCAATAAGAAAATGATATGCCTACCCCTGTAATTTAAGTGTCTAGAAAGCGTTGGATTGGTGTTTAATGCCCAAGCTAAGGTGTAATGTGTTTCATAAGACTGATTGGTTGGGCAATGGGTAGAGCAAGGGAGGTTATAGAATTAATTGACTTTTCAGTACTATAGGATTTACATTTTAGTAGATGTTATGTTTCTTATCTCACTCGTTCACATTCTTTCTGCAGGTAAGAAGCTAGCCGAAAGCATTGTCAAAGAGAAACTTGCTGCTTGTGTTAACATAGTTTCCGGTATGTGCATCTTCTCCTGCTGCTTGTCAGCTTAAAGTGAAAGAATGCATTCTTCATAGTTTGGAAAAGATATTAGTTCAACAATATTTATAATCCATGCTAGCAGAACATTTGTTATCCTCCTCTAAGTTCTCTATTCATATAAATAAAGTTGCTTCTGACCATTTAAAATTGAAGCTTACTGGATCTTCTCTGGAATATTTTAATGCTGTTTTTGAGTTAAGGAAACTTTATAAATACTCTACTTGATCATGTTGGGAACAGAATTGCTTTCCTTTTCATCCTTTGACACTTCAGACCGTGTGATTTCACAAACAGAAGTGATGCATCAAGACGTTTTCACAGCCCCGTTTTATTTTTTTTTTTCCCCCAATTTTCACAATGCATTTCTTTTCTTGTAGAGGTTTATTTTTATTTATTGCAACTGCCTAGTAATATGACTTTTCAGATTTCTAATGAATACTTTATATATGCAGGTATAGAATCCGTCTACCAGTGGAAGGGAGAGGTATGGTTCTCATTTTCATAAATTGCTATATAGTTATCAAGTATGTGATCGCCTGTTTGTCTTTTCCAGAAAATGAATTTAACTGTAGGCTTTTTGTTTATGGTCGACGCAGATCCAGACAGACGCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGTAAGCCTAACATTCTTCCTTTGTTTTTGTCTTGTGTTTTGTTTGTTGCTGTCTGTGAGTGTGTTTCTCATTTTCAATGTCGGGTACAATGTGAACTGTTCAGCTTATCGGCTAGACATTTAGGGTTTTTAAGGATAATTTTTTTTTATTTCGTTAACCATATTCATTTGCTGATATCTTTTTTTTGTTAGTCATTATTTTCATGAATGACTGTAAAATCTTAGCTAAAATTTGAAAACTAAGTAGCAGAATACCAAAAGAAAATATAATAATAATAAACCCATTATAAAAAATGAGTTGTATTTTGACCTCTGGGTTCTTGTTTTTCGAATTTATCTAAGAATTAAAAGTTTTTGCTTGGGAGAGATGAAAGCTGTGGTAAAGATAAGAATTGAAATCTTTACTTGGGAAATATGAAAACTGTGGTAAAAATGATGAGAAAACAAGCTAGTTATATGTATAAAAGCCCTATTTTGTTGCCTCCATCTTTTTTACACAGGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCGGGGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGA

mRNA sequence

AGTGAAGGCATCAAGTAAGCTCAAGCCGGAGCGTTGAAAAGGCGCGACAGGATTAGCGCTATAAAAGCGAAATGGCCTTTACTCTCTGCAGCAGAGTCGCGACTCCATTGCTATCATCCTCAGTCCTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTAGGATTCTCCAATCTCTTCGTCTCCAGAACGGGTTCCGCTCTGTCGCTGCCTTTCGCACCTCTCTTGAGATCGACGTTTGGTAGTCAAGGACCTGCTAGGAACGTGCATTTGATAAAAATGGAAGGGAATAGTGCCGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTAAGAAGCTAGCCGAAAGCATTGTCAAAGAGAAACTTGCTGCTTGTGTTAACATAGTTTCCGGTATAGAATCCGTCTACCAGTGGAAGGGAGAGATCCAGACAGACGCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCGGGGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGA

Coding sequence (CDS)

ATGGCCTTTACTCTCTGCAGCAGAGTCGCGACTCCATTGCTATCATCCTCAGTCCTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTAGGATTCTCCAATCTCTTCGTCTCCAGAACGGGTTCCGCTCTGTCGCTGCCTTTCGCACCTCTCTTGAGATCGACGTTTGGTAGTCAAGGACCTGCTAGGAACGTGCATTTGATAAAAATGGAAGGGAATAGTGCCGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTAAGAAGCTAGCCGAAAGCATTGTCAAAGAGAAACTTGCTGCTTGTGTTAACATAGTTTCCGGTATAGAATCCGTCTACCAGTGGAAGGGAGAGATCCAGACAGACGCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCGGGGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGA

Protein sequence

MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTKD

Homology

[Close]

BLAST of CmoCh05G005580 vs. ExPASy Swiss-Prot
Match: P93009 (Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 7.1e-53
Identity = 117/189 (61.90%), Postives = 145/189 (76.72%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLS-LGFSNLFVS---RTGSALSLPFAPLL 60
           MA +L +R++  + S    RR  P+VGAFCVLS L  S+L  S   ++G A S    PLL
Sbjct: 1   MASSLTTRLSAVIGS----RRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLL 60

Query: 61  RSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVS 120
           RS F S+  + +   I+ME +S  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIV 
Sbjct: 61  RSKFSSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVP 120

Query: 121 GIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYL 180
           GIESVY+W+G++Q+D+EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YL
Sbjct: 121 GIESVYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYL 180

Query: 181 EWIKSSTKD 186
           EW+K+ST++
Sbjct: 181 EWLKNSTRN 182

[Close]

BLAST of CmoCh05G005580 vs. ExPASy Swiss-Prot
Match: Q109R6 (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-46
Identity = 101/172 (58.72%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 14  LSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTFGSQGPARNVHLIK 73
           LS  +LRRR P+ GA   LSLG      S + SA +                       +
Sbjct: 28  LSPLLLRRRAPIAGALLFLSLGAFAGVRSLSSSASA-----------------------R 87

Query: 74  MEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAE 133
           ME  S  VPSIVVYVTVPN+EAGK+LA SI+ EKLAACVNIV GIESVY W+G++QTDAE
Sbjct: 88  MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAE 147

Query: 134 ELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTKD 186
           ELLIIKTR+SLL ALT+HVKANH Y+VPEVIALPI GG+ +YLEW+K+ST++
Sbjct: 148 ELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 176

[Close]

BLAST of CmoCh05G005580 vs. ExPASy Swiss-Prot
Match: O60888 (Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-25
Identity = 63/161 (39.13%), Postives = 97/161 (60.25%), Query Frame = 0


Query: 31  VLSLGFSNLFVSRTGSALSLPFA------PLLRSTFGSQGPARNVHLIKMEGNSAAVPSI 90
           VL  G ++L +S       LP A      P +  T  S  P          G+     S+
Sbjct: 9   VLLGGVASLLLSFVWMPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSV 68

Query: 91  -VVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAEELLIIKTRQS 150
              +VT PN +  K++A ++V+++LAACVN++  I S+Y+WKG+I+ D+E L++IKT+ S
Sbjct: 69  SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSS 128

Query: 151 LLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTK 185
           L+ ALTD V++ HPYEV EVIALP+  G+  YL+W++  T+
Sbjct: 129 LVPALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTE 169

[Close]

BLAST of CmoCh05G005580 vs. ExPASy Swiss-Prot
Match: P69678 (Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-25
Identity = 69/160 (43.12%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 27  GAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTFGSQGPARNVHLIKMEGNSAAVPSIV- 86
           GA  +LSL +    +      L LP A LL    GS  PA+          SA VP  V 
Sbjct: 14  GAALLLSLFWMPTLLPAASRLLLLPRA-LLSMASGSP-PAQP----SSSSRSAYVPGSVS 73

Query: 87  -VYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAEELLIIKTRQSL 146
             +VT PN +  K++A ++V+++L ACVN+V  I S+Y+WKG+I+ D+E L++IKT+ SL
Sbjct: 74  AAFVTCPNEKVAKEIARAVVEKRL-ACVNLVPQITSIYEWKGKIEEDSEVLMMIKTQSSL 133

Query: 147 LGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTK 185
           + ALTD V++ HPYEV EVIALP+  G+  YL+W++  T+
Sbjct: 134 VPALTDFVRSVHPYEVAEVIALPVEQGNSPYLQWVRQVTE 166

[Close]

BLAST of CmoCh05G005580 vs. ExPASy Swiss-Prot
Match: Q9CQ89 (Protein CutA OS=Mus musculus OX=10090 GN=Cuta PE=1 SV=3)

HSP 1 Score: 112.8 bits (281), Expect = 4.0e-24
Identity = 52/109 (47.71%), Postives = 79/109 (72.48%), Query Frame = 0


Query: 78  SAAVPSIV--VYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAEEL 137
           S  VP  V   +VT PN +  K++A ++V+++LAACVN++  I S+Y+WKG+I+ D+E L
Sbjct: 59  SGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVL 118

Query: 138 LIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTK 185
           ++IKT+ SL+ ALT+ V++ HPYEV EVIALP+  G+  YL W+   T+
Sbjct: 119 MMIKTQSSLVPALTEFVRSVHPYEVAEVIALPVEQGNPPYLHWVHQVTE 167

[Close]

BLAST of CmoCh05G005580 vs. ExPASy TrEMBL
Match: A0A6J1HF76 (protein CutA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462991 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.0e-96
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF
Sbjct: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
           GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. ExPASy TrEMBL
Match: A0A6J1K4I7 (protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.2e-93
Identity = 181/185 (97.84%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTLCSRVATPLLS SVLRRRLPLVGAFCVLS GFSNLFVSRTGSALSLPFAPLLRSTF
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
           GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSVEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. ExPASy TrEMBL
Match: A0A0A0LRU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 166/185 (89.73%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTL SR ATPL++S  LRRRLPLVGAFCVLS G SNLFVS+TGSALSLPF PLLRS  
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQ+D EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. ExPASy TrEMBL
Match: A0A1S3BBF3 (protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.1e-84
Identity = 165/185 (89.19%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTL SR ATPL+S   LRRRLPLVGAFCVLS G SNLFVS+TGSALS+PF PLLRS  
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           +YQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. ExPASy TrEMBL
Match: A0A6J1BS17 (protein CutA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005035 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.6e-84
Identity = 163/185 (88.11%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTLCSRV+ PLLSSS LRRRLPLVGAFCVLS G S++F+SRTGSALSLPFAPLLRS F
Sbjct: 1   MAFTLCSRVSAPLLSSSALRRRLPLVGAFCVLSFGISHIFISRTGSALSLPFAPLLRSKF 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
           G QGPARNVH ++ME  SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  GGQGPARNVHFVRMEATSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQTD EELLIIKTRQSLLG+LTDHVKANHPYEVPEVIAL I GGS EYL+WIK
Sbjct: 121 VYQWKGEIQTDPEELLIIKTRQSLLGSLTDHVKANHPYEVPEVIALRITGGSLEYLDWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: XP_022962588.1 (protein CutA, chloroplastic [Cucurbita moschata])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF
Sbjct: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
           GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: KAG7029661.1 (Protein CutA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.8 bits (917), Expect = 5.5e-95
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF
Sbjct: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
           GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: XP_022997267.1 (protein CutA, chloroplastic [Cucurbita maxima])

HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93
Identity = 181/185 (97.84%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTLCSRVATPLLS SVLRRRLPLVGAFCVLS GFSNLFVSRTGSALSLPFAPLLRSTF
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
           GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSVEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: XP_023545579.1 (protein CutA, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 180/185 (97.30%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTLCSRVATPLLS SVLRRRLPLVGAFCVLS GFSNLFVS+TGSALSLPFAPLLRSTF
Sbjct: 1   MAFTLCSRVATPLLSPSVLRRRLPLVGAFCVLSFGFSNLFVSKTGSALSLPFAPLLRSTF 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
           GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSMEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: KAG6598721.1 (Protein CutA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332.4 bits (851), Expect = 2.5e-87
Identity = 173/185 (93.51%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF
Sbjct: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
           GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEI TDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSG+   + K
Sbjct: 121 VYQWKGEILTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGDKYAFAK 180

Query: 181 SSTKD 186
              K+
Sbjct: 181 YEGKE 185

[Close]

BLAST of CmoCh05G005580 vs. TAIR 10
Match: AT2G33740.2 (Nitrogen regulatory PII-like, alpha/beta )

HSP 1 Score: 208.4 bits (529), Expect = 5.0e-54
Identity = 117/189 (61.90%), Postives = 145/189 (76.72%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLS-LGFSNLFVS---RTGSALSLPFAPLL 60
           MA +L +R++  + S    RR  P+VGAFCVLS L  S+L  S   ++G A S    PLL
Sbjct: 1   MASSLTTRLSAVIGS----RRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLL 60

Query: 61  RSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVS 120
           RS F S+  + +   I+ME +S  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIV 
Sbjct: 61  RSKFSSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVP 120

Query: 121 GIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYL 180
           GIESVY+W+G++Q+D+EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YL
Sbjct: 121 GIESVYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYL 180

Query: 181 EWIKSSTKD 186
           EW+K+ST++
Sbjct: 181 EWLKNSTRN 182

[Close]

BLAST of CmoCh05G005580 vs. TAIR 10
Match: AT2G33740.1 (Nitrogen regulatory PII-like, alpha/beta )

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 99/163 (60.74%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLS-LGFSNLFVS---RTGSALSLPFAPLL 60
           MA +L +R++  + S    RR  P+VGAFCVLS L  S+L  S   ++G A S    PLL
Sbjct: 1   MASSLTTRLSAVIGS----RRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLL 60

Query: 61  RSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVS 120
           RS F S+  + +   I+ME +S  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIV 
Sbjct: 61  RSKFSSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVP 120

Query: 121 GIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYE 160
           GIESVY+W+G++Q+D+EELLIIKTRQSLL  LT+HV ANH YE
Sbjct: 121 GIESVYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYE 156

The following BLAST results are available for this feature:

BLAST of CmoCh05G005580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93009	7.1e-53	61.90	Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1	[more]
Q109R6	8.3e-46	58.72	Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 ...	[more]
O60888	3.6e-25	39.13	Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2	[more]
P69678	8.1e-25	43.13	Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1	[more]
Q9CQ89	4.0e-24	47.71	Protein CutA OS=Mus musculus OX=10090 GN=Cuta PE=1 SV=3	[more]

BLAST of CmoCh05G005580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HF76	7.0e-96	100.00	protein CutA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462991 PE=3 S...	[more]
A0A6J1K4I7	3.2e-93	97.84	protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=...	[more]
A0A0A0LRU0	1.2e-84	89.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1	[more]
A0A1S3BBF3	2.1e-84	89.19	protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1	[more]
A0A6J1BS17	3.6e-84	88.11	protein CutA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005035 PE=3 ...	[more]

BLAST of CmoCh05G005580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962588.1	1.4e-95	100.00	protein CutA, chloroplastic [Cucurbita moschata]	[more]
KAG7029661.1	5.5e-95	99.46	Protein CutA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997267.1	6.7e-93	97.84	protein CutA, chloroplastic [Cucurbita maxima]	[more]
XP_023545579.1	1.5e-92	97.30	protein CutA, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6598721.1	2.5e-87	93.51	Protein CutA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh05G005580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33740.2	5.0e-54	61.90	Nitrogen regulatory PII-like, alpha/beta	[more]
AT2G33740.1	1.3e-41	60.74	Nitrogen regulatory PII-like, alpha/beta	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004323	Divalent ion tolerance protein, CutA	PFAM	PF03091	CutA1	coord: 84..181 e-value: 9.1E-38 score: 128.1
IPR004323	Divalent ion tolerance protein, CutA	PANTHER	PTHR23419	DIVALENT CATION TOLERANCE CUTA-RELATED	coord: 17..184
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120		coord: 63..184 e-value: 2.0E-48 score: 164.8
None	No IPR available	PANTHER	PTHR23419:SF10	PROTEIN CUTA CHLOROPLASTIC	coord: 17..184
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 83..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G005580.1	CmoCh05G005580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010038	response to metal ion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005507	copper ion binding