CmoCh05G004570 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAGCATCTCTCTGATTCAGAATTGTGCACTATTCATCTTCGTCGTCGTCTTGCTTCTTTCGGGTTGATAATGGCCGCCTCATTTACGGCTCCGGCTCAGGGCCTGGTTCATTGTCGAAATCCGACGCTCGGATTTTCCGATTCCATCTTCAATCGCACTCAACTTCAATTTCAGGGGCCAGTTCCTGCAAAATCACATCCCCTTTCCTTTTCGTATCAATTGAAGCTTGCTAATGATGTATCTCCCACAAAGGATCACCGTTGCTCTTTTGTGCAGACGGCCGCCGTTCGCCACATCGTCGGCTCTATTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTCATTTCTCTTTCCCGCTCTTTTTTTTTTTCGTCTTCTTATTCTTTTGATTCTGGAAGTTCTGATTGTTCGTTCTTGAGGTTCCTCTTTAGGTATTTTTGTTAATAATTTTGGACTTGTGAGGTCTCGGCGTCTGAAGTGGTTTTTTCTTATCGTCTACCTAAAAAGGTATAGTCTAGTTGAGAAACATGCTTCTACATGATGCTGTATCGTCTTAGAAATTATTCGCTTCTAAGAAGCGTTCTTTTGATTTGTTGCTTGCAACCAATTCAAAGGTGGTAGTCACATTTGTGGCTGCGACAATGAGTAATTTCTTGGCTTGGCTACAATGAATTCAAAGCATGGTCGTGTATTCTTATGATGTATAAATCTGAAATTCTTACAAGCCTTTTCGCTGCAGCCTTCCGAGCGAATTCTGTTATCATGAATCTAAACTGAATTTTTTCCCCTTGTCATTTTTTGACGATGGACTAGTAAGATTTAACCATGAAATCGATGGTTTTTCTTGCTTGCATATCCCGTTGATTGGTTTGTCATTATTGAATACTTCTTTTTGCCTTGATGAAGGTTGTGGGGCGGTTTAACGAAATTGTGACAAGGCCAATGCTTGAGGGAGCTTTGTCTACATTCAAAAGTTATTCAGTTCAAGATGAGGATATTGATGTAAGCGTTTCAATATACAAATTGCGAAAGTCGCACCATTAAGCATATGAGCAGAGCGAGTGTGTGGATAAATATGTTTACCAATGCTTTAAAAGACTATTGAAGTTTACACCCCGAGGTGAGGCAAGACTCATAAATTTTAGCCTCAAAACTTATGCCTTCTTTGAACCATAAGCGGCGCATGCCTCTGTGAAATGAAACCGCATGGAGGATTAAAGTCGCTTGGCCTTAAGTATTGGTTAGAAGAATAATCTTAATTTACCTCTTTCTTACCAAACATAAAGGTTTGAGTTGTGATAATTTGAACATTTCTACTTTTACTATTGCGACTTTAGGGTGATTTTTTTTATAAACCCTTATATTAATATTATGTTTAGCTATACTTGGTCCTACCAATATAGGATTTGTAAATGTTTTTAATTAGATTTGAGGCTTGTGCCTCGCCTCTTCTAAGGTAAAGTTTTAAGGCTGCCTTTATCCTTTAAAAACATTGGAACTAGATTCTCATGTATGTCATGTGAGTAAGTAAACAAATTTAACTAGATATTATGGGTTTAAGTAGAGTAGGATCAATGAATTTGATCGACAGAGGAAAGCAGAACATAGAACTTTCGTCAGATTTGCATTGAGAGAGAACGTGTATTTGACCTCTACTAGTTGGCATGCAGCGTTAACTTTGCTTGACATGTTGAATTTATTATTTACATCGCTTTCATATCAGGTTGTCTGGGTTCCGGGGAGCTTTGATATTCCTGTGGTCGCTGAAAGGCTTGGGACATCTGGAAAGTACCATGCTGTCTTATGCATTGGAGCTGTGGTATGCTTTCCTGTAACACATATCTAGTCTTGGGTGCACTTATTAATATCACGAACTACTTGTTTATGATAGATTAGAGGTGACACATCCCACTATGATGCCGTTGTAAGCTCTTCTGCATCCGGAGTACTTTCTGCAGGATTAAAATCAGGTTGGCTTTTTTTTTTTTTTTTTTTTTAGTTTAGTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTGAGTTTAGTAGTTCCCTGTTAATTTGAATTTTTCTTGCCAATATTTGTTCTGTTTGCTTACCTTTTGCAAGTTCAACCTCAATGGTTGAGCATTAAGCATGGTGGTTAAGGTTTTTGAATCCAATTGATATGTTCAAGAATTTTGAGACCATCATATCTTGAGACATTTAAGAGCGTATAAGATTCTAAATACTTAAATATTGAAGTGAAGTTGACTTTATCGTTCCAGTTTTGACATCTATGAACCATGAGGGATTAAGGAATTTCAGGGTATGAAAAGGACAAGAAGAATCTGGTTATTATAGATTCATAAATAGATACAGATGAATTCAAATTGTGCCATCACATGCACATTCTTAGTTCTTTATTAAAAAAAAAAAAATGGTGTCTCCAATTAAAGCTTATATTTCTCCCTCAATTGGACGCTCATGCAATTCTTATAATTAATTTGATTTTATAACGTCAAAGGCCATTGTCATCAGTCGAAGTATTTCATTTTTTTATGGAATGGTATTATAGGTAATATTTCAGAGGAGCAACGCCCCATTTAAAGCATTTCAATATAGACAATAGTAATAGTTCGATTGGGAACAATAATGGTTTTAGGTTTATGTTGTTGGGAGCTAACTATGTTCTTGTTCTTGTATAACTGATATGAGGATTATCTTCTACCCTTTATGTGTGTAAACATATGTTGAAATTTATTGATAGACCTGTTGAAGTGTTGATAACTGCAATGCAAGTAATCTCTGTAACCATCTTTTTACTACCATTTATACCAACGTTACCATCTTAATTCTACTCTTTCTTCATCGTTTAGTTGACGCCAGATGAAACTTAAGCGATTTTTCTGATGCCTATGCAGGAGTTCCATGCGTATTTAGCGTCTTGACTTGTGACAACTTGGACCAGGTAAATATGATCCTAAACTGACTGTTAACAAGTATTTTACCTAGAGAATTGTTTTCTATGGAGCTGCATGATTTCTGATCATTATCTACTTTTTGCCACCTTTTTTCTTTCTCCTGTCTGAAGGCTTTCAATCGAGCTGGTGGTAAACATGGAAATAAGGGTTCTGAGGGTGCTTTGACTGCTGTAAGTTGTTTAAGAGCAAAAATATATGGGAAAAAATTTACAATATATGGATAAAAAACGTTGAATTTGTTATTTTCATGTATGTATATATGTTTATATTTCAATCTTATAAGATTTTGCATGACTTATAATATTTAGTGGCTTTTCTTGGCTTCTGAGAAGTGACTTTTTCTTTTGTAATCCATTTTGAATGTGCTCTTATCAGGGTAAAAAATGCAAACTTCACAATAGAACATGTAATCATATTTCATTTGTCTGTATCCATATCCATGGATGTCTCATATCTGCATCCATGGCTTCTAGCAAACAACATCACTGAAGCGATATTGTAACTTCCCGTCTCCGTCCCTATCCATGGGAACCGCAGCACACTCCTTAGGGTGATCTTCCTTCAGCAAATATTGCAAGGAAGATAACTTGGTTTAGAGACGGGAAAACATGCCACAATCCAAAGATGCTTATATTCACGTTTCTCCATTTTTTTCAGCATCAATTTGTTTGAATCATTAATTGTTTGTTATAAGCATCATAGTTTGGTTATTATGCAATCGACTATATCCAAACTTTTTGTACCTAATATTCATTCCACCATTCTTTTATTGAAACTCTTGTGTATTCATTGGCCAATTTCACTTTTCCTACAGATGGAGCTGGCATCGTTGTTCGAGTACGACCTGAAGTAGTCGAGAAACAGGATCTAACGTTTTCCACATTGCGGGTTTTCAGTCTTGTGATTTCTCTGTTGTCTTTGCTAATGGTGGAATGCTTAATCAAATTGCTAAAAGCCACATGAAGTATCAGGCAGAAGTCAGCTGAAACTGCTCGAGAGGAAGGAGTGTAAGTTCTCATGATTTCAATTTTTTTCAATTTTCAAAATTTCTTTGTTCAGCATCGTCTTTTTAAGTTTCATGTTAGCATAAAAGATGAGGCGTTCACTTGTGGCATTGTGTTGTTTAGCAATGCGCAACGAACAAAGATTATATTACCGAAGAGGCGTCGTTATTCAGTTATAAATGGTAGCCTCTACAATATGGTTGCCTCCTTTCGAGTCTTTCAATTTCTCTCGTACATTTAATAGTGTAAAATCATCGACACAACTCTTCAATAAAGGCACCTATGAGACTTTCATTA ATAAGCATCTCTCTGATTCAGAATTGTGCACTATTCATCTTCGTCGTCGTCTTGCTTCTTTCGGGTTGATAATGGCCGCCTCATTTACGGCTCCGGCTCAGGGCCTGGTTCATTGTCGAAATCCGACGCTCGGATTTTCCGATTCCATCTTCAATCGCACTCAACTTCAATTTCAGGGGCCAGTTCCTGCAAAATCACATCCCCTTTCCTTTTCGTATCAATTGAAGCTTGCTAATGATGTATCTCCCACAAAGGATCACCGTTGCTCTTTTGTGCAGACGGCCGCCGTTCGCCACATCGTCGGCTCTATTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTTAACGAAATTGTGACAAGGCCAATGCTTGAGGGAGCTTTGTCTACATTCAAAAGTTATTCAGTTCAAGATGAGGATATTGATGTTGTCTGGGTTCCGGGGAGCTTTGATATTCCTGTGGTCGCTGAAAGGCTTGGGACATCTGGAAAGTACCATGCTGTCTTATGCATTGGAGCTGTGATTAGAGGTGACACATCCCACTATGATGCCGTTGTAAGCTCTTCTGCATCCGGAGTACTTTCTGCAGGATTAAAATCAGGAGTTCCATGCGTATTTAGCGTCTTGACTTGTGACAACTTGGACCAGGCTTTCAATCGAGCTGGTGGTAAACATGGAAATAAGGGTTCTGAGGGTGCTTTGACTGCTATGGAGCTGGCATCGTTGTTCGAGTACGACCTGAAGTAGTCGAGAAACAGGATCTAACGTTTTCCACATTGCGGGTTTTCAGTCTTGTGATTTCTCTGTTGTCTTTGCTAATGGTGGAATGCTTAATCAAATTGCTAAAAGCCACATGAAGTATCAGGCAGAAGTCAGCTGAAACTGCTCGAGAGGAAGGAGTGTAAGTTCTCATGATTTCAATTTTTTTCAATTTTCAAAATTTCTTTGTTCAGCATCGTCTTTTTAAGTTTCATGTTAGCATAAAAGATGAGGCGTTCACTTGTGGCATTGTGTTGTTTAGCAATGCGCAACGAACAAAGATTATATTACCGAAGAGGCGTCGTTATTCAGTTATAAATGGTAGCCTCTACAATATGGTTGCCTCCTTTCGAGTCTTTCAATTTCTCTCGTACATTTAATAGTGTAAAATCATCGACACAACTCTTCAATAAAGGCACCTATGAGACTTTCATTA ATGGCCGCCTCATTTACGGCTCCGGCTCAGGGCCTGGTTCATTGTCGAAATCCGACGCTCGGATTTTCCGATTCCATCTTCAATCGCACTCAACTTCAATTTCAGGGGCCAGTTCCTGCAAAATCACATCCCCTTTCCTTTTCGTATCAATTGAAGCTTGCTAATGATGTATCTCCCACAAAGGATCACCGTTGCTCTTTTGTGCAGACGGCCGCCGTTCGCCACATCGTCGGCTCTATTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTTAACGAAATTGTGACAAGGCCAATGCTTGAGGGAGCTTTGTCTACATTCAAAAGTTATTCAGTTCAAGATGAGGATATTGATGTTGTCTGGGTTCCGGGGAGCTTTGATATTCCTGTGGTCGCTGAAAGGCTTGGGACATCTGGAAAGTACCATGCTGTCTTATGCATTGGAGCTGTGATTAGAGGTGACACATCCCACTATGATGCCGTTGTAAGCTCTTCTGCATCCGGAGTACTTTCTGCAGGATTAAAATCAGGAGTTCCATGCGTATTTAGCGTCTTGACTTGTGACAACTTGGACCAGGCTTTCAATCGAGCTGGTGGTAAACATGGAAATAAGGGTTCTGAGGGTGCTTTGACTGCTATGGAGCTGGCATCGTTGTTCGAGTACGACCTGAAGTAG MAASFTAPAQGLVHCRNPTLGFSDSIFNRTQLQFQGPVPAKSHPLSFSYQLKLANDVSPTKDHRCSFVQTAAVRHIVGSIAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAERLGTSGKYHAVLCIGAVIRGDTSHYDAVVSSSASGVLSAGLKSGVPCVFSVLTCDNLDQAFNRAGGKHGNKGSEGALTAMELASLFEYDLK Homology
BLAST of CmoCh05G004570 vs. ExPASy Swiss-Prot
Match: O80575 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44050 PE=1 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 3.6e-67 Identity = 125/189 (66.14%), Postives = 158/189 (83.60%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy Swiss-Prot
Match: Q9XH32 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.6e-62 Identity = 117/172 (68.02%), Postives = 143/172 (83.14%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy Swiss-Prot
Match: A5D1C7 (6,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=ribH PE=3 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 4.2e-39 Identity = 75/150 (50.00%), Postives = 106/150 (70.67%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy Swiss-Prot
Match: A6LSS9 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=ribH PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37 Identity = 71/138 (51.45%), Postives = 102/138 (73.91%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy Swiss-Prot
Match: B9E377 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium kluyveri (strain NBRC 12016) OX=583346 GN=ribH PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.3e-37 Identity = 70/140 (50.00%), Postives = 102/140 (72.86%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy TrEMBL
Match: A0A6J1HD10 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucurbita moschata OX=3662 GN=LOC111462852 PE=3 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 3.0e-125 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy TrEMBL
Match: A0A6J1KDC4 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucurbita maxima OX=3661 GN=LOC111492217 PE=3 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.1e-122 Identity = 222/228 (97.37%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy TrEMBL
Match: L0C9N6 (6,7-dimethyl-8-ribityllumazine synthase OS=Momordica charantia OX=3673 GN=LOC111005179 PE=2 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 5.0e-104 Identity = 193/228 (84.65%), Postives = 208/228 (91.23%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy TrEMBL
Match: A0A6J1GHB3 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucurbita moschata OX=3662 GN=LOC111454202 PE=3 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 4.3e-103 Identity = 196/228 (85.96%), Postives = 207/228 (90.79%), Query Frame = 0
BLAST of CmoCh05G004570 vs. ExPASy TrEMBL
Match: A0A6J1KRP6 (6,7-dimethyl-8-ribityllumazine synthase OS=Cucurbita maxima OX=3661 GN=LOC111496605 PE=3 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 3.6e-102 Identity = 195/228 (85.53%), Postives = 206/228 (90.35%), Query Frame = 0
BLAST of CmoCh05G004570 vs. NCBI nr
Match: XP_022962396.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 457.6 bits (1176), Expect = 6.3e-125 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh05G004570 vs. NCBI nr
Match: KAG6598623.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 448.4 bits (1152), Expect = 3.8e-122 Identity = 223/228 (97.81%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of CmoCh05G004570 vs. NCBI nr
Match: XP_022997258.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 447.6 bits (1150), Expect = 6.5e-122 Identity = 222/228 (97.37%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of CmoCh05G004570 vs. NCBI nr
Match: KAG7029560.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 427.6 bits (1098), Expect = 6.9e-116 Identity = 213/216 (98.61%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of CmoCh05G004570 vs. NCBI nr
Match: XP_023546359.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 416.4 bits (1069), Expect = 1.6e-112 Identity = 219/280 (78.21%), Postives = 221/280 (78.93%), Query Frame = 0
BLAST of CmoCh05G004570 vs. TAIR 10
Match: AT2G44050.1 (6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase ) HSP 1 Score: 256.1 bits (653), Expect = 2.6e-68 Identity = 125/189 (66.14%), Postives = 158/189 (83.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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