CmoCh05G003890 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G003890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor HY5-like
Location	Cmo_Chr05: 1756069 .. 1757646 (-)
RNA-Seq Expression	CmoCh05G003890
Synteny	CmoCh05G003890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTTGTCCGGTCTTGTCTCTGTTTGTACGAAGAAATGCAGGAGCAAGCGACGAGTTCCGCCGCCGCTAGCTCTTTACCTTCGAGCAGTGAAAGATCGTCCAGCTCTGCTCTTCACCTCGAAGTGAAAGAAGGTTAATCTTCTTTCTGTTCTTTCTTTCTCTGTTTCGAGCTTCTTGATTTTTTATTTACAGATTTTTCTGTAATTTTGTGTGAATGGGTGTTTTGTTGGGACTGAATGGGGCGAGAAATTTAGGAATAGAGAGTGATGAAGAGATCCGGAGAGTGCCGGAGATAGGCGGCGAATCCGCCGGAACATCGGCGTCCGGCAGGGAGACCAGTTCGTTGGCCGGTCCGGACCGGGTTCAGGTTTCTCGGGAGAGTCAAAGGAAGAGAGGGAGAACTCCGGCTGACAAAGAAAGCAAGAGATTGAAGAGGTGAGCCAGACGCGGGTCGTTTTGGTACTTTCACGTTTCAATTAATAATTTATATTTTCAATAAATAATTTATAATTATTTTATAAAATAAGGGATAAAAAAATATTCGAATTTAATTTTTTTTTTTTATATTCTTACATATAGTTTTGAAATCAATTTCCATTTATTCTTCTAAATGAATTTATTATTATTATTATTATTTTAATATTCTTAAATGTTGACTTTTTATTATTCTTACATATAATTTTTTAAATTAATTGTGAAAATTAATTAATTAATATTTTGTATAATTTATTTTTTAATAGACTATTGAGGTTTTGAAGCTATTTGTGTTATGTTTAATAAAGATTGCTGAGAAATAGAGTATCAGCACAGCAAGCGAGGGAGAGGAAAAAGGCGTATTTGAATGACTTAGAGATAAGGGTGAAGGATTTGGAGAAGAAGAACTCTGAACTTGAAGAAAGGCTTTCCACTTTACAGAATGAGAATCAGATGCTTAGACAAGTACGTTTTATTTATTCCCTAATTATATTATTAATAATTTCAAGTTGGTTTCGTTCGGATTGGAAGAACGATGAGCGTTTGATGAACGAGTATCGAATTTGTTTTAACGCATACCGATTTGATTGCGAATTGTAGATTTTGAAGAACACAACGGCAAGTCGGAGAAGTGGGGAGTGAGGATGTGAAGTAGAGATGTATTTAGATGTTTGAGGCTTTCATGAAACAGGTTGCTTATATAACCTTCGCAACAACCAACTTTTAACTTGAAACGTTGAGATCGTCTTGTTCGGTATGTTCTTAAGGTATAAAGCACGACGTGGTTTCATGGAAGAGCGACTTTACTGCTGAAATACTATGCATGTTTCGTCGTTTAGGATATGTTCTGTCTGTATGTAATAGACAAGTAAACGCATTCATTCTTTAGAATGACCAATTCCTTTGTTCACCGCATCCAAGTTCCTGTTCTTTAATGAATTGGAGCTGTGGCTCCATCCATGAATCCTGACGAACCTGAAGAAAAATTTGTCTTTCTTTAGGGGTTTCGAACGGTAAAAGTGACCGACCTGTAAGAAAAATCTGTCTTTGTTTAAGGGTTTCGAACGGTAAAAGTGACCAACCTGTAAGAAAAATCTGTCTTT

mRNA sequence

GAATTTGTCCGGTCTTGTCTCTGTTTGTACGAAGAAATGCAGGAGCAAGCGACGAGTTCCGCCGCCGCTAGCTCTTTACCTTCGAGCAGTGAAAGATCGTCCAGCTCTGCTCTTCACCTCGAAGTGAAAGAAGGAATAGAGAGTGATGAAGAGATCCGGAGAGTGCCGGAGATAGGCGGCGAATCCGCCGGAACATCGGCGTCCGGCAGGGAGACCAGTTCGTTGGCCGGTCCGGACCGGGTTCAGGTTTCTCGGGAGAGTCAAAGGAAGAGAGGGAGAACTCCGGCTGACAAAGAAAGCAAGAGATTGAAGAGATTGCTGAGAAATAGAGTATCAGCACAGCAAGCGAGGGAGAGGAAAAAGGCGTATTTGAATGACTTAGAGATAAGGGTGAAGGATTTGGAGAAGAAGAACTCTGAACTTGAAGAAAGGCTTTCCACTTTACAGAATGAGAATCAGATGCTTAGACAAATTTTGAAGAACACAACGGCAAGTCGGAGAAGTGGGGAGTGAGGATGTGAAGTAGAGATGTATTTAGATGTTTGAGGCTTTCATGAAACAGGTTGCTTATATAACCTTCGCAACAACCAACTTTTAACTTGAAACGTTGAGATCGTCTTGTTCGGTATGTTCTTAAGGTATAAAGCACGACGTGGTTTCATGGAAGAGCGACTTTACTGCTGAAATACTATGCATGTTTCGTCGTTTAGGATATGTTCTGTCTGTATGTAATAGACAAGTAAACGCATTCATTCTTTAGAATGACCAATTCCTTTGTTCACCGCATCCAAGTTCCTGTTCTTTAATGAATTGGAGCTGTGGCTCCATCCATGAATCCTGACGAACCTGAAGAAAAATTTGTCTTTCTTTAGGGGTTTCGAACGGTAAAAGTGACCGACCTGTAAGAAAAATCTGTCTTTGTTTAAGGGTTTCGAACGGTAAAAGTGACCAACCTGTAAGAAAAATCTGTCTTT

Coding sequence (CDS)

ATGCAGGAGCAAGCGACGAGTTCCGCCGCCGCTAGCTCTTTACCTTCGAGCAGTGAAAGATCGTCCAGCTCTGCTCTTCACCTCGAAGTGAAAGAAGGAATAGAGAGTGATGAAGAGATCCGGAGAGTGCCGGAGATAGGCGGCGAATCCGCCGGAACATCGGCGTCCGGCAGGGAGACCAGTTCGTTGGCCGGTCCGGACCGGGTTCAGGTTTCTCGGGAGAGTCAAAGGAAGAGAGGGAGAACTCCGGCTGACAAAGAAAGCAAGAGATTGAAGAGATTGCTGAGAAATAGAGTATCAGCACAGCAAGCGAGGGAGAGGAAAAAGGCGTATTTGAATGACTTAGAGATAAGGGTGAAGGATTTGGAGAAGAAGAACTCTGAACTTGAAGAAAGGCTTTCCACTTTACAGAATGAGAATCAGATGCTTAGACAAATTTTGAAGAACACAACGGCAAGTCGGAGAAGTGGGGAGTGA

Protein sequence

MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRETSSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE

Homology

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BLAST of CmoCh05G003890 vs. ExPASy Swiss-Prot
Match: O24646 (Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.3e-54
Identity = 127/158 (80.38%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSS AASSLPSSSERSSSSA HLE+KEGIESDEEIRRVPE GGE+ G   SGRE+
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES 60

Query: 61  SSLAGPDRVQVS-RESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRV 120
            S  G +R Q +  ESQRKRGRTPA+KE+KRLKRLLRNRVSAQQARERKKAYL++LE RV
Sbjct: 61  GSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRV 120

Query: 121 KDLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSG 158
           KDLE KNSELEERLSTLQNENQMLR ILKNTT ++R G
Sbjct: 121 KDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGG 158

[Close]

BLAST of CmoCh05G003890 vs. ExPASy Swiss-Prot
Match: Q9SM50 (Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.8e-50
Identity = 125/158 (79.11%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAG-TSASGRE 60
           MQEQATSS AASSLPSSSERSSSSALH E+KEG+ESD+EIRRVPE+GGE+ G TSASGR+
Sbjct: 1   MQEQATSSIAASSLPSSSERSSSSALHHELKEGMESDDEIRRVPEMGGEATGTTSASGRD 60

Query: 61  TSSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRV 120
             S AG  + Q S  +QRKRGR+PADKE+KRLKRLLRNRVSAQQARERKKAYL DLE RV
Sbjct: 61  GVSAAG--QAQPSAGTQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLEARV 120

Query: 121 KDLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSG 158
           K+LE KN+ELEERLSTLQNENQMLR ILKNTTA  + G
Sbjct: 121 KELETKNAELEERLSTLQNENQMLRHILKNTTAGAQEG 156

[Close]

BLAST of CmoCh05G003890 vs. ExPASy Swiss-Prot
Match: Q8W191 (Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18
Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 13  SLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRETSSLAGPDRVQVS 72
           SL   +  SSSS+ H + K   ESDEE+  VP++    +    S      +  P+  Q  
Sbjct: 2   SLQRPNGNSSSSSSHKKHKTE-ESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQ 61

Query: 73  R---ESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSEL 132
                ++R+RGR P DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N +L
Sbjct: 62  NGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQL 121

Query: 133 EERLSTLQNENQMLRQILKNT 151
           EE++STL NEN MLR++L NT
Sbjct: 122 EEKISTLTNENTMLRKMLINT 141

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BLAST of CmoCh05G003890 vs. ExPASy Swiss-Prot
Match: Q54WN7 (Probable basic-leucine zipper transcription factor F OS=Dictyostelium discoideum OX=44689 GN=bzpF PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-05
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 85  DKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLR 144
           ++  KR +RL++NR +AQ  R+R+KAY+ DLE +V DL   NSE   R+  L +EN+++R
Sbjct: 403 ERHQKRQRRLVKNREAAQLFRQRQKAYIQDLEKKVSDLTGTNSEFRARVELLNSENKLIR 462

Query: 145 QIL 148
           + L
Sbjct: 463 EQL 465

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BLAST of CmoCh05G003890 vs. ExPASy Swiss-Prot
Match: Q8TFU8 (Transcriptional activator hacA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=hacA PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-05
Identity = 32/79 (40.51%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 77  RKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTL 136
           RKR +T  +KE +R++R+LRNR +AQ +RERK+  +  LE    D+E++N  L +RL+ +
Sbjct: 77  RKRAKTEDEKEQRRIERVLRNRAAAQTSRERKRLEMEKLESEKIDMEQQNQFLLQRLAQM 136

Query: 137 QNENQMLRQILKNTTASRR 156
           + EN  L Q +   +A  R
Sbjct: 137 EAENNRLSQQVAQLSAEVR 155

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BLAST of CmoCh05G003890 vs. ExPASy TrEMBL
Match: A0A6J1HBY4 (transcription factor HY5-like OS=Cucurbita moschata OX=3662 GN=LOC111462690 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. ExPASy TrEMBL
Match: A0A6J1K7Q9 (transcription factor HY5-like OS=Cucurbita maxima OX=3661 GN=LOC111491914 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67
Identity = 155/158 (98.10%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLE+KEG+ESDEEIRRVPEIGGESAGTSASGRET
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLELKEGMESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
            SLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. ExPASy TrEMBL
Match: F1DQG1 (BZIP2 OS=Cucumis melo OX=3656 GN=LOC103488299 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.9e-66
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEG+ESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
            S+AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. ExPASy TrEMBL
Match: A0A5A7VGC0 (Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002530 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.9e-66
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEG+ESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
            S+AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. ExPASy TrEMBL
Match: A0A0A0LPK1 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G381650 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.9e-66
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEG+ESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
            S+AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. NCBI nr
Match: XP_022962152.1 (transcription factor HY5-like [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 3.7e-68
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
           SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. NCBI nr
Match: KAG6598576.1 (Transcription factor HY5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
            SLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. NCBI nr
Match: XP_022996780.1 (transcription factor HY5-like [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 5.4e-67
Identity = 155/158 (98.10%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLE+KEG+ESDEEIRRVPEIGGESAGTSASGRET
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLELKEGMESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
            SLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. NCBI nr
Match: XP_023545723.1 (transcription factor HY5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEG+ESDEEIRRVPEIGGESAGTSASGRET
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRET 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
             LAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GLLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. NCBI nr
Match: NP_001284656.1 (Transcription factor HY5-like [Cucumis melo] >XP_004138731.1 transcription factor HY5 [Cucumis sativus] >XP_022131702.1 transcription factor HY5-like [Momordica charantia] >XP_038885580.1 transcription factor HY5-like [Benincasa hispida] >KAA0064935.1 transcription factor HY5 [Cucumis melo var. makuwa] >ADX23549.1 bZIP2 [Cucumis melo] >KGN62939.1 hypothetical protein Csa_022614 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSSAAASSLPSSSERSSSSALHLEVKEG+ESDEEIRRVPEIGGESAGTSASGR+T
Sbjct: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGMESDEEIRRVPEIGGESAGTSASGRDT 60

Query: 61  SSLAGPDRVQVSRESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120
            S+AGPDRVQVSRE QRKRGR+PADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK
Sbjct: 61  GSVAGPDRVQVSREGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVK 120

Query: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 159
           DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE
Sbjct: 121 DLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSGE 158

[Close]

BLAST of CmoCh05G003890 vs. TAIR 10
Match: AT5G11260.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 211.1 bits (536), Expect = 6.6e-55
Identity = 127/158 (80.38%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MQEQATSSAAASSLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRET 60
           MQEQATSS AASSLPSSSERSSSSA HLE+KEGIESDEEIRRVPE GGE+ G   SGRE+
Sbjct: 1   MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRES 60

Query: 61  SSLAGPDRVQVS-RESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRV 120
            S  G +R Q +  ESQRKRGRTPA+KE+KRLKRLLRNRVSAQQARERKKAYL++LE RV
Sbjct: 61  GSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRV 120

Query: 121 KDLEKKNSELEERLSTLQNENQMLRQILKNTTASRRSG 158
           KDLE KNSELEERLSTLQNENQMLR ILKNTT ++R G
Sbjct: 121 KDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGG 158

[Close]

BLAST of CmoCh05G003890 vs. TAIR 10
Match: AT3G17609.2 (HY5-homolog )

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19
Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 13  SLPSSSERSSSSALHLEVKEGIESDEEIRRVPEIGGESAGTSASGRETSSLAGPDRVQVS 72
           SL   +  SSSS+ H + K   ESDEE+  VP++    +    S      +  P+  Q  
Sbjct: 2   SLQRPNGNSSSSSSHKKHKTE-ESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQ 61

Query: 73  R---ESQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSEL 132
                ++R+RGR P DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N +L
Sbjct: 62  NGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQL 121

Query: 133 EERLSTLQNENQMLRQILKNT 151
           EE++STL NEN MLR++L NT
Sbjct: 122 EEKISTLTNENTMLRKMLINT 141

[Close]

BLAST of CmoCh05G003890 vs. TAIR 10
Match: AT3G17609.1 (HY5-homolog )

HSP 1 Score: 88.6 bits (218), Expect = 4.9e-18
Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 75  SQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLS 134
           ++R+RGR P DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N +LEE++S
Sbjct: 52  AKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKIS 111

Query: 135 TLQNENQMLRQILKNT 151
           TL NEN MLR++L NT
Sbjct: 112 TLTNENTMLRKMLINT 127

[Close]

BLAST of CmoCh05G003890 vs. TAIR 10
Match: AT3G17609.3 (HY5-homolog )

HSP 1 Score: 88.6 bits (218), Expect = 4.9e-18
Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 75  SQRKRGRTPADKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLS 134
           ++R+RGR P DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N +LEE++S
Sbjct: 37  AKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKIS 96

Query: 135 TLQNENQMLRQILKNT 151
           TL NEN MLR++L NT
Sbjct: 97  TLTNENTMLRKMLINT 112

[Close]

BLAST of CmoCh05G003890 vs. TAIR 10
Match: AT3G17609.4 (HY5-homolog )

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 26  LHLEVKEGIESDEEIRRVPEIGGESAGTSASGRETSSLAGPDRVQVS-RESQRKRGRTPA 85
           + L+   G  S     +  +  G +   S+S  +  +    D+ Q     ++R+RGR P 
Sbjct: 1   MSLQRPNGNSSSSSSHKKHKTAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPV 60

Query: 86  DKESKRLKRLLRNRVSAQQARERKKAYLNDLEIRVKDLEKKNSELEERLSTLQNENQMLR 145
           DKE + LKRLLRNRVSAQQARERKK Y++DLE R  +L+  N +LEE++STL NEN MLR
Sbjct: 61  DKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLR 120

Query: 146 QILKNT 151
           ++L NT
Sbjct: 121 KMLINT 126

The following BLAST results are available for this feature:

BLAST of CmoCh05G003890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24646	9.3e-54	80.38	Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1	[more]
Q9SM50	4.8e-50	79.11	Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1	[more]
Q8W191	2.8e-18	47.52	Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1	[more]
Q54WN7	4.7e-05	44.44	Probable basic-leucine zipper transcription factor F OS=Dictyostelium discoideum...	[more]
Q8TFU8	4.7e-05	40.51	Transcriptional activator hacA OS=Emericella nidulans (strain FGSC A4 / ATCC 381...	[more]

BLAST of CmoCh05G003890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBY4	1.8e-68	100.00	transcription factor HY5-like OS=Cucurbita moschata OX=3662 GN=LOC111462690 PE=3...	[more]
A0A6J1K7Q9	2.6e-67	98.10	transcription factor HY5-like OS=Cucurbita maxima OX=3661 GN=LOC111491914 PE=3 S...	[more]
F1DQG1	4.9e-66	96.20	BZIP2 OS=Cucumis melo OX=3656 GN=LOC103488299 PE=2 SV=1	[more]
A0A5A7VGC0	4.9e-66	96.20	Transcription factor HY5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LPK1	4.9e-66	96.20	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G381650 PE=3 S...	[more]

BLAST of CmoCh05G003890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962152.1	3.7e-68	100.00	transcription factor HY5-like [Cucurbita moschata]	[more]
KAG6598576.1	1.1e-67	99.37	Transcription factor HY5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022996780.1	5.4e-67	98.10	transcription factor HY5-like [Cucurbita maxima]	[more]
XP_023545723.1	1.2e-66	98.10	transcription factor HY5-like [Cucurbita pepo subsp. pepo]	[more]
NP_001284656.1	1.0e-65	96.20	Transcription factor HY5-like [Cucumis melo] >XP_004138731.1 transcription facto...	[more]

BLAST of CmoCh05G003890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11260.1	6.6e-55	80.38	Basic-leucine zipper (bZIP) transcription factor family protein	[more]
AT3G17609.2	2.0e-19	47.52	HY5-homolog	[more]
AT3G17609.1	4.9e-18	64.47	HY5-homolog	[more]
AT3G17609.3	4.9e-18	64.47	HY5-homolog	[more]
AT3G17609.4	1.6e-16	45.24	HY5-homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..153
None	No IPR available	PRINTS	PR00041	LEUZIPPRCREB	coord: 84..100 score: 35.69 coord: 122..139 score: 40.37 coord: 102..122 score: 43.49
None	No IPR available	GENE3D	1.20.5.490	Single helix bin	coord: 108..149 e-value: 9.9E-21 score: 75.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..69
None	No IPR available	PANTHER	PTHR46714:SF6	TRANSCRIPTIONAL ACTIVATOR HAC1	coord: 1..155
None	No IPR available	CDD	cd14704	bZIP_HY5-like	coord: 90..141 e-value: 2.4138E-14 score: 61.4362
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 89..147
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 85..149 e-value: 8.6E-16 score: 68.5
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 86..147 e-value: 2.0E-14 score: 53.4
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 92..107
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 87..150 score: 12.644833
IPR044280	Transcriptional activator Hac1/HY5	PANTHER	PTHR46714	TRANSCRIPTIONAL ACTIVATOR HAC1	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G003890.1	CmoCh05G003890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0003700	DNA-binding transcription factor activity