CmoCh05G002610 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAATTTGCGCTTGTTAGCATGTAAGACCCAGGGGACTAAAACGCAGCGTTTCGGTAGATCGATTTCCAAATTACCCTATTGCTGCGATCCCATTGCTTCCTCGTTCCATTTCTGAGTACAAGAAGCCCAAAAGCTCCCAGTGATTTGGTTGGCTCTGAATAGCGCGAGGTCAGAGAGGAGGAGGAAGAAGAAGACGATGGGAACTCTGGGGAAAGCCATTTACACCGTTGGATTTTGGATCCGTGAGACGGGTCAGGCAATCGATCGCCTTGGCTGCCGCCTCCAAGGGAGATATTTCTTCCAAGAACAGCGTAAGCAATTTATTGTTATTGTTTTCTGAAATATCACGTTCCTATAGTGTCGGATCTTTCTCCTTTAATTTTGACTTTCATCCAGGTATGTTTTAGGAGTTCTGTTATCCTGATTGGATCAGCTTGTCGGAATGCTAATTGATTATGTCTGAATTTGATTGATGAAAAGTGTTTTTCGTGGTAAATACAGCTTATGCGTCGTGTCGTTTGTGTGGTTACGCCAGAGTTGCCATTGATTCTCAAATTTTGAGTGGCTGAGGTTTCGAGTATTAGGGTTACGGATGTACACGATTTTTTTTTTTTTTTTTTTTGGATTTTTATTAGAATTGTTGATGGTGGTATACGAAGCAACGTATGACGAATGCTTCTATAATTTTATAAGAGAGGGTGTCAAATGCGGGCAAACGATGCTTACTGGGATATAATGGAATTCTTAATTACAAATGCAAGTGTAATTTGGGAGTAAAGTTTTAGTGAAATGACTCCCTTGGGGATTTCAAAGTGTAATTGTTGATGGCACTGTTTCTGAAACACACTTCTTGTTAGATTTGCTTCATTTTCTGTTTGCTGTGGTATTGTAATTTGTTATGAATTCCCTTTTATTGTTCTATCATATTGATGATACCTAATGGACTAATGTGTCTGAGGTTTCCTGCAGTGTCGAGGCATCGTACTCTGATGAACATATTTGATAAGGCACCTGTTGTTGACAAGGACGTATTTGTAGCTCCAGGTGCATCCATTATTGGGGACGTTCAAGTTGGAAGAGGATCTTCTATTTGGTATGGGTGCGTTTTGAGAGGTAAAACCCATGTGAAGGACTCTTTTGTTGTTACAGTATTTCCAAGTCCGGTTTGTGCACATTTAATCTTGTCGGTACATGCTTTGAAAGTTTGGACTATCTAAAATTTTTGTCCATTTTAAACCTCTTCAAGCTATTGTAACAACACTACTTACCTAACAATTTCACTAATGAAACACATGCCCTTTCAATATCCCAATAACAACTCAGATATTGCCCATACTAATATTCCTTCCTTAACGCAAAGGTTTATGCAAAAATTAATGTAATGAGAGTTTGTGTTATTTGATGTGTTTGCAATGTCATCCAGAGTGCCTCTCCGTATCTGTTGACATTTCAACTATCATTAGCTCACTTCGGTTGCCCACTCTAAGTGCTTTAAATATCTGTGGCTTTGTCTTTTCCTGTCAAAAAAATAATTACTTGCTGGTGCTTCATGGCTAGCTCTTGCATTCCTTTTTCACCTTAACCTTGACACTTGATGTTCGATCAACTTAGGGTCCGTTGGGGAGTATAGTTTAGAATTTATTATATTTTATTGTTCACATATATAGCTCCTTTGGTAGGATCATTTTTAAAAGTAGTTTTTAGTTTAAAAAACTTTAAAAAAATAATAGTATTTTGTTATTTTCGTGTGTTTTCTTTTTTGTATTCTTTGTTAAATGTTATGTTTATATATGGTCATTAAGAATATAGAAGACTCTCTTCTTCTTGGAGTGCCCCATCGCTTATGCTACAAACATATAGAAGACTCGTACCATGTGTTTTCCTCCATTTGGAGAGGGTCTTGGGTTTAAGTTGGTGTTTTCAGGAAGATTTTCACTATTCCTTATCATCTATTGACTTTGGAATGTGTAGTGAAAGTGGCTCCTTGGAGGAGGCTTTGGCTAGAGAGGAATGCTCAATTGTTTCAAGGAAAATTAACTTTTCTGAGCTTAGGAGATGATGAGATTTAATTGTGCTCTTGATGCTGTAAATCAAAGAATTTTTGTTCTTATTTTCCTCTTTTAAGATTCGGAGAAGTTTTTTGTCATCTCCTTCAGATTTTGTAGGTTGGGAGAATGTCTTAGTTTCCCTTGTAGTTCTGTTTTCTCTTATTTATTATTTTTAGAAAAGTTACTTTAAATAGAAAAGGTTGTCAACTGTTTTATATTTTGGTTTTTTTAATTGATTTGAAAAAATAAACTTTGCAAACTTGTTATCCTAGGAGAGACCCATCTTTTAAGAACAGAAAATCATTTAAAACATAATCTTTACAGAGGACCTCACGGTCTTGTGTCCACGTTGTTTGTTATTATTTCTCATTAGAATATATGCTGAAGTATGTTTTAGATAGGAGTTGTCAATTTTTTAAAAAACGGAAAATCATAAAATACAATCTTCATTCTTCAAACAACTTCTCAGTCTTTTAGACATATTGTTTGTTTTTATCTCACTAAAATTTCTGAAATTGACAATCTGTAAAACAGTATCAAACTTAAATTAAAATAGACATTTAATTCATATCATGTTAGGCTTGTTAGCCAATGACATTACTTATACATTGAACTCTTTGTATGTTTTATTTCATAACTTAATTATCTATTTGACTAGGTGATGTGAACAGCATCAGTGTGGGATCTGGAACCAACATACAGGACAACTCCCTTGTGCATGTGGCAAAATCTAATCTAAGTGGAAAGGTTTTGCCGACTATCATTGGCAACAATGTCACCGTAGGTGTGTGTGCTATGTTATCTTAGCTGTAGCGATATAATATATCTGTCTGATCTTTTGTCCTGTATACCGTGAGCAACTGAGCATGCTGAGGATGCACGTGTTAATTATTTTAAAGTTTTCTTACTTAAAAAGAAGTTTAAACCTGACAGGTCACAGTGCCGTATTACATGGCTGCACTGTTGAGGATGAGGCTTTTGTTGGCATGGGTGCAACATTGCTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTAGCTGCTGGAGCTCTTGTGAGGCAAAATACTAAGATCCCCTCTGGAGAGGTACTTCTCAAGACTTTTTTTTTTTTAGGCCGAGGTAGGAGAGGTCTCCTGCAAAGTGGTTACAAAAAAGCAACCCTAAATGAGGTTGATCAAGAAACTATTAAAAATTACAAAGACTTGTTAAGGACACTCCAAGTTGAAGTTTTAGGCTGTAAGCTGAACTCAGCCTAAAGATTTTTGTCTGTCATGGTACGGATTAGCATTCTTTTCTATCCAAGTGAACCACAAAAGAAGCTCTAATTGTACAATTCCAAAGCACTTCAGCTTTGTCACTTACCCCACCTATCGTTGATAGTTTTCATTAGCCACTCTGATGTCTACACAGAAAGCCACTCCAAATGTAGAAAGAAGGTGCCACTCATTCATCGTTTCCTCATCTCTTTTATATAGAGCAAAAACTTTAGGCAAGATGCAAGTATATAAGGATTCTGTCTTTGAGTCCTATCATGCATATTTAAACTCTTGTAAGTCACAGACCAAAGGTAGAGTTGACACATTGGGATCCTTGCTATTCACAATAAATTTAGTGTGAGAAGAGTTTAAATTTAGGCGTTGCAAATCAAATCAAGGTGAGATGAATTACACCCAAAAAAAGAAAAATCTTGATCTGTTGAGGCAAAAAGTTCATCTTCTTCAGGGCCAAATCTTACTGTTTCTATCTTATCTATTGGGAAAATCCAATTCCTACTGTCTATCAAAAAGATCCGGCCTTAAATCCCAAACTGGAATATGGGAATTCCATTCCTCTTTGATCAATACCCTCTAGTGGATATCTTGAAATAATTTGGTTACCCTGGATACTAATTCTGAATGATAATCTGTTCTGAACTTGCATTGGAGCATGGACTTGGGCTTCTATGTTAGCTTTATGGGGTCATGGGTAGTGAGCTTTACCACAATGTTTATTTGCAGGTATGGGGAGGGAATCCAGCGAAATTCCTCCGAAAGCTCACTGATGAAGAGATAGCTTTCATATCTCAGTCGGCCACCAATTACTTGAACCTTGCACAGGTTCACGCAGCTGAAAATGCAAAGTCTTTCGAGGAAATTGAGTTTGAGAAGGTGCTCCGCAAGAAGTTTGCTCGCAAGGACGAAGAATATGACTCAATGCTTGGTGTTGTTCGTGAAATACCCCCTGAACTCGTCCTTCCCGACAACATCTTACCCAATAAAGATCCCAAGCCTTTGCAGAAATAAAACCACCCATCCTTTGTTCAATCTTGATTTGTTTAGCTGAGGAGTATTTTGGCATCATATGCAAAAATACATCAAAAAAGAGTTTGTGTACTTGCAGAATAATATCGATCATCTTCTACCGCAGAATTATGGCATCCATTTTGGCTGTTGGGACTATTCTTCTGGCAGCATTTTAGAAATGGTTTTACTGCTCAGGATGAAACTGACTTCATAAAAGTAGATTGTAAGTTTGTTCATCTTCTGTATCGAAGCTCCAATTTTCGTTCCTTTTCCCACTCATTTTGCTGATATTTGAAGCATTTGATGTCAAAAGACTGTCTGAAAGTGACTCCTAAAGTGGTGTGAAAGCCGCTGAGGGCTAATCTCCCTCCTCTGTATGTTTCAAGTCCTTTGGATTCTTCGGACAACATTATAATTGGGAGTCTGAATATTTGATACAGGTTGAGGCTTTAATGATCTTGGACAAGCAGATACTGATTGCCTGAT TTAATTTGCGCTTGTTAGCATGTAAGACCCAGGGGACTAAAACGCAGCGTTTCGGTAGATCGATTTCCAAATTACCCTATTGCTGCGATCCCATTGCTTCCTCGTTCCATTTCTGAGTACAAGAAGCCCAAAAGCTCCCAGTGATTTGGTTGGCTCTGAATAGCGCGAGGTCAGAGAGGAGGAGGAAGAAGAAGACGATGGGAACTCTGGGGAAAGCCATTTACACCGTTGGATTTTGGATCCGTGAGACGGGTCAGGCAATCGATCGCCTTGGCTGCCGCCTCCAAGGGAGATATTTCTTCCAAGAACAGCTGTCGAGGCATCGTACTCTGATGAACATATTTGATAAGGCACCTGTTGTTGACAAGGACGTATTTGTAGCTCCAGGTGATGTGAACAGCATCAGTGTGGGATCTGGAACCAACATACAGGACAACTCCCTTGTGCATGTGGCAAAATCTAATCTAAGTGGAAAGGTTTTGCCGACTATCATTGGCAACAATGTCACCGTAGGTCACAGTGCCGTATTACATGGCTGCACTGTTGAGGATGAGGCTTTTGTTGGCATGGGTGCAACATTGCTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTAGCTGCTGGAGCTCTTGTGAGGCAAAATACTAAGATCCCCTCTGGAGAGGTATGGGGAGGGAATCCAGCGAAATTCCTCCGAAAGCTCACTGATGAAGAGATAGCTTTCATATCTCAGTCGGCCACCAATTACTTGAACCTTGCACAGGTTCACGCAGCTGAAAATGCAAAGTCTTTCGAGGAAATTGAGTTTGAGAAGGTGCTCCGCAAGAAGTTTGCTCGCAAGGACGAAGAATATGACTCAATGCTTGGTGTTGTTCGTGAAATACCCCCTGAACTCGTCCTTCCCGACAACATCTTACCCAATAAAGATCCCAAGCCTTTGCAGAAATAAAACCACCCATCCTTTGTTCAATCTTGATTTGTTTAGCTGAGGAGTATTTTGGCATCATATGCAAAAATACATCAAAAAAGAGTTTGTGTACTTGCAGAATAATATCGATCATCTTCTACCGCAGAATTATGGCATCCATTTTGGCTGTTGGGACTATTCTTCTGGCAGCATTTTAGAAATGGTTTTACTGCTCAGGATGAAACTGACTTCATAAAAGTAGATTGTAAGTTTGTTCATCTTCTGTATCGAAGCTCCAATTTTCGTTCCTTTTCCCACTCATTTTGCTGATATTTGAAGCATTTGATGTCAAAAGACTGTCTGAAAGTGACTCCTAAAGTGGTGTGAAAGCCGCTGAGGGCTAATCTCCCTCCTCTGTATGTTTCAAGTCCTTTGGATTCTTCGGACAACATTATAATTGGGAGTCTGAATATTTGATACAGGTTGAGGCTTTAATGATCTTGGACAAGCAGATACTGATTGCCTGAT ATGGGAACTCTGGGGAAAGCCATTTACACCGTTGGATTTTGGATCCGTGAGACGGGTCAGGCAATCGATCGCCTTGGCTGCCGCCTCCAAGGGAGATATTTCTTCCAAGAACAGCTGTCGAGGCATCGTACTCTGATGAACATATTTGATAAGGCACCTGTTGTTGACAAGGACGTATTTGTAGCTCCAGGTGATGTGAACAGCATCAGTGTGGGATCTGGAACCAACATACAGGACAACTCCCTTGTGCATGTGGCAAAATCTAATCTAAGTGGAAAGGTTTTGCCGACTATCATTGGCAACAATGTCACCGTAGGTCACAGTGCCGTATTACATGGCTGCACTGTTGAGGATGAGGCTTTTGTTGGCATGGGTGCAACATTGCTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTAGCTGCTGGAGCTCTTGTGAGGCAAAATACTAAGATCCCCTCTGGAGAGGTATGGGGAGGGAATCCAGCGAAATTCCTCCGAAAGCTCACTGATGAAGAGATAGCTTTCATATCTCAGTCGGCCACCAATTACTTGAACCTTGCACAGGTTCACGCAGCTGAAAATGCAAAGTCTTTCGAGGAAATTGAGTTTGAGAAGGTGCTCCGCAAGAAGTTTGCTCGCAAGGACGAAGAATATGACTCAATGCTTGGTGTTGTTCGTGAAATACCCCCTGAACTCGTCCTTCCCGACAACATCTTACCCAATAAAGATCCCAAGCCTTTGCAGAAATAA MGTLGKAIYTVGFWIRETGQAIDRLGCRLQGRYFFQEQLSRHRTLMNIFDKAPVVDKDVFVAPGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGNNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKNAMVAAGALVRQNTKIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYLNLAQVHAAENAKSFEEIEFEKVLRKKFARKDEEYDSMLGVVREIPPELVLPDNILPNKDPKPLQK Homology
BLAST of CmoCh05G002610 vs. ExPASy Swiss-Prot
Match: Q9FWR5 (Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA1 PE=1 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 9.7e-114 Identity = 208/269 (77.32%), Postives = 229/269 (85.13%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy Swiss-Prot
Match: Q9C6B3 (Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA2 PE=1 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 7.2e-109 Identity = 195/268 (72.76%), Postives = 228/268 (85.07%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy Swiss-Prot
Match: Q94AU7 (Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA3 PE=1 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 3.6e-92 Identity = 175/262 (66.79%), Postives = 203/262 (77.48%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy Swiss-Prot
Match: Q54JC2 (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0288155 PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.9e-33 Identity = 80/236 (33.90%), Postives = 131/236 (55.51%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy Swiss-Prot
Match: P0A9W9 (Protein YrdA OS=Escherichia coli (strain K12) OX=83333 GN=yrdA PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25 Identity = 60/126 (47.62%), Postives = 86/126 (68.25%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy TrEMBL
Match: A0A6J1HDF2 (gamma carbonic anhydrase 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462504 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 3.7e-132 Identity = 250/273 (91.58%), Postives = 250/273 (91.58%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy TrEMBL
Match: A0A6J1K9F0 (gamma carbonic anhydrase 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111491855 PE=4 SV=1) HSP 1 Score: 478.4 bits (1230), Expect = 1.8e-131 Identity = 248/273 (90.84%), Postives = 249/273 (91.21%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy TrEMBL
Match: A0A6J1CRS2 (gamma carbonic anhydrase 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013980 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 3.2e-128 Identity = 239/273 (87.55%), Postives = 248/273 (90.84%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy TrEMBL
Match: A0A0A0LRI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361800 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.5e-128 Identity = 238/273 (87.18%), Postives = 248/273 (90.84%), Query Frame = 0
BLAST of CmoCh05G002610 vs. ExPASy TrEMBL
Match: A0A5A7VDF2 (Gamma carbonic anhydrase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005580 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 7.2e-128 Identity = 237/273 (86.81%), Postives = 248/273 (90.84%), Query Frame = 0
BLAST of CmoCh05G002610 vs. NCBI nr
Match: XP_022961865.1 (gamma carbonic anhydrase 1, mitochondrial [Cucurbita moschata] >XP_023546575.1 gamma carbonic anhydrase 1, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 480.7 bits (1236), Expect = 7.6e-132 Identity = 250/273 (91.58%), Postives = 250/273 (91.58%), Query Frame = 0
BLAST of CmoCh05G002610 vs. NCBI nr
Match: KAG6598458.1 (Gamma carbonic anhydrase 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131 Identity = 249/273 (91.21%), Postives = 250/273 (91.58%), Query Frame = 0
BLAST of CmoCh05G002610 vs. NCBI nr
Match: XP_022996684.1 (gamma carbonic anhydrase 1, mitochondrial [Cucurbita maxima]) HSP 1 Score: 478.4 bits (1230), Expect = 3.8e-131 Identity = 248/273 (90.84%), Postives = 249/273 (91.21%), Query Frame = 0
BLAST of CmoCh05G002610 vs. NCBI nr
Match: XP_022144249.1 (gamma carbonic anhydrase 1, mitochondrial [Momordica charantia]) HSP 1 Score: 467.6 bits (1202), Expect = 6.6e-128 Identity = 239/273 (87.55%), Postives = 248/273 (90.84%), Query Frame = 0
BLAST of CmoCh05G002610 vs. NCBI nr
Match: XP_038886467.1 (gamma carbonic anhydrase 1, mitochondrial [Benincasa hispida]) HSP 1 Score: 467.2 bits (1201), Expect = 8.7e-128 Identity = 240/273 (87.91%), Postives = 249/273 (91.21%), Query Frame = 0
BLAST of CmoCh05G002610 vs. TAIR 10
Match: AT1G19580.1 (gamma carbonic anhydrase 1 ) HSP 1 Score: 411.0 bits (1055), Expect = 6.9e-115 Identity = 208/269 (77.32%), Postives = 229/269 (85.13%), Query Frame = 0
BLAST of CmoCh05G002610 vs. TAIR 10
Match: AT1G47260.1 (gamma carbonic anhydrase 2 ) HSP 1 Score: 394.8 bits (1013), Expect = 5.1e-110 Identity = 195/268 (72.76%), Postives = 228/268 (85.07%), Query Frame = 0
BLAST of CmoCh05G002610 vs. TAIR 10
Match: AT5G66510.1 (gamma carbonic anhydrase 3 ) HSP 1 Score: 339.3 bits (869), Expect = 2.5e-93 Identity = 175/262 (66.79%), Postives = 203/262 (77.48%), Query Frame = 0
BLAST of CmoCh05G002610 vs. TAIR 10
Match: AT5G66510.2 (gamma carbonic anhydrase 3 ) HSP 1 Score: 335.1 bits (858), Expect = 4.8e-92 Identity = 175/273 (64.10%), Postives = 203/273 (74.36%), Query Frame = 0
BLAST of CmoCh05G002610 vs. TAIR 10
Match: AT1G19580.2 (gamma carbonic anhydrase 1 ) HSP 1 Score: 268.9 bits (686), Expect = 4.2e-72 Identity = 134/179 (74.86%), Postives = 150/179 (83.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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