CmoCh05G002320 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATGTATCCACCCGCTCTCTCTCATGACAAACGAGGAGACTTCAGCGAATCGTCTTTCCAGCTCTCTGATCGACGATCTTCCAGGTTGGGATTCTCTGATCCGCCCCCATTTTGTGAATATTTGTACTCGTATCTACTATTCTCTCAATCTTTACTTGATTTTTCCGTTCTGTTTGATTCTTCGCTGAAAATCATGTTTGGATGGTGATGATTGAAGGATCGAGTGGTGGGTTTAGGGTTTAGGGTTTATTTCTTGTAGTTGATCGGTGTGTTTGTTTCCTCTCTGTCTTTATGATTGAAATTATGTAATGTAATGTAATGATCGGCTAACTTGTTGTTGATTTTGAACGATACGTGATTTGGGTTTTATGAACCCCAAATCAGCTATTTGGAGATGTGGCCTGCATGCAATTGTTGGGTGGGAACATTTATATCTGATCTTCTGTGTCGCTTATATTACAGCTCGTTGCAGCTATTTTTTGAATTAACAGAGTGATTTTTGGACCTTTTTTTTTGTTCTCTTATTTCTTTCTTTACTGATGAATCGATATGTACGCACTGTGTGGCTTGATCATTTTTGCCTCATCATCTGAATTATTTGTTCATGTAAGAGAGATTCCATTGCTTATAGGTGATCAATTCGTAGTCGAGATTGGATTGATTTGATTTGAAGCTTAATTGAGTTTCGTTTTGTGATTTCTTTTGGAACAGCTCTAGACAAAAGTAGACAAGAGTTCTGTCTTCTCCTTGTTACCATGACTCCTTCAACGGTCACCTCTTCGACTATACTTGATTTATTTTCTACTGACAATGAGACTTTTTTAGCATTATGGAGAATAAGGAGTGGAGGATCTTTTCCTGCAAATGTTCATGATATAAATCCTTACCAGTGTAAACCTGAAAATTTACCAGGTACTTTTTCACAAGAATTCATGTTGATAATTTCCCAAGTTTTCCAGCAAATGTTCATGATATGATGATGTTCTTCAAGGCTCAGGCCTCTTGAATTGCCGCGTGTCGAACACTGTATTTTCAGTTTATATCATAAAACAATTTCAATGTTGATTCCTTGCTTCAATTTTCAAAACAGTGTCAAAGTTACGAAATACAAATTTACAGCTGAGACATGCTTGTTTAGTTTCAATGAAGCTTAAGGTACTTTTTATGTCCAGATGGAGTTTGGTATTATGTTGAGGGCAATGTGGATGCTGGCTCAAGTTTCGGTCGCTGGAAGCTGAAAGATGGAGATTGTAAACTGTATTCAAGCTCTTCCTTCACTGGAGGGAGAGCAAGTTATGAATATTATGAAGGTCAAGCACCTTATGAGAGTAAAACAGCCTGGGTTATGCAAAAGTACTGGATGAATCAGATGGACCTGCGTGCCACCTTCGAGCAAAAGGTATGTCCTGCAAAATCTATTTGCCAAAAGGTTCATTGGCTGACATTGCCCTTTTTTCTTTTCCTACCCAACCTATTAGTAGTCAATTGCTTGTTTGGTTGGGCAATATGCAGGAGACCAGCTCACTTTGCAAAGTCTTTCTTGGAGATGAACAGTTTCAAAACAATGAAATGATTCAGAAAACCGAATTTTCTAGTATTCTCAATTCAGAACCAATCCTAAATCATCAGTTGGTTGTTACAGATGGTTCGACTTCGAATAACATGGCGAGTGGATCGACAAGCAAGTCTAAGGTTGTAATCATTATCCCAGCCACCCCCCCCCCCCGATGTCCATGCATTTCTTTCTTAAAGTTTATATGAGACCGGTTTTGGAAACTGATTGCTCCCATCTTCTCTCCATTTCCTTCTCTGCTGGGTTCAGAGTCGCAAATGGTGTCTTTGTTTTCAGTTAATGACAAATGATGTTTTGTAGATGAATGAAGATGACAAGATGGTAGAATTGGCAGATGCAGGAAAACGTTTGGATAATCATTTAGAAGATATCCATCCTGAGATGGATTATTGTTTAGGTGACGACTACTTGGAATTGCTGGATTTAGATAACCCAACATCTTCGTCATCGAGTTCTGAAAATTCTAGTTGCTTGTCCATGTCGTCGAATGAAGATTTTGATACAATGGATGTTCTATGTGATGTAGAACGTGAAATTAACCATGACAGGGGACGAAGAGATGCTGCCTGCATCCATTCCTCTGCACCCTTCAAACTAAAGAAGGAGGTGGTGCATCAAGTGGCTTCAGGTTTGTCCACTTATTTTTTGCATCCTCCTGGTGTTTAACTTTCATTTTGTGCAGAACAGAACATTCTGCTACGTGGTTACTGAATGGAACCATATGGGTTGTGCTATTCTTTCGTATGTTCTCCAAAAAACCAATCACCATAGAGAGAATTATTCTGATTTTATGCCCAAGCTGCTAATATTTCTCTTTATATGTATCCCTGCCCTTCTGTTTGTCAATAATAGTCTCACATTGGTTGATTGGTTGGTTGGTTGGAGAGGAGAATGAAACATCCTTTATAATGGTGTGGAAACCTCTCTCTAGTAGACGGATTTTAAAAACTCTAAGGGGAAGCCTACAGAGACAATATTTGTTAGCAGTGGACTTGAGAAGTTACAAATGGTATCAGAGCCATACATCGGGCAGCGTACTAGCGAGGACGTTGGGCCTCCAAGGGGGTGGATTGTAAGATCCCACGTCAGTTGAATAAAAGAATGAAACATTCCTTATAAGGGTGTGAAAAATCTCTCCCTTGTAGACGCGTTCTAAAAACCTTGAGGTAATGTTTGTACAAAGAGAACAATATCTGCTAGCAGTAGATTTTGGTTGTTACAATCTCTCACCTGCATGCTCGAGTAGAGTTATTTAGACGAAAATGTAAAATTGTCATCATGGTTTCAACCATAGATTCACAGTTACGAAATGCATATTCACTTTAGATCTAAACACACGACTTCTCGTTTTCCCTCTCGAAAATGCAGCAGGAAAATTACATCGCTTACTCATAATAACTATCCTTCTTGTTCACAGATTCTCTTGTCACCATCATAAGAAGCCACACAGCGGCCAAAGAGACTCCCAAAACCGATTCGTCGGCGAACATGAAACTCCCAAGCCAGAGTAAGAAAGAAGGGTACAGAATGAAAGGTGCATCATCAAGTTGTCACAACAAGGTGGTCTCAAATGGTGAAGAAACAGGTGTGGATGGAGGAAAGAAGAGGGTTGGCAGAAGGGAGAAGAGTCCAAAGAAGTACTTTTGCTTCTTTGCTCTTTAGATCTTCCTCAGCATCAGTTAGAGTAAGTAAGTTAGTGATGGGATTAGACCAGATTAACAATGGTTTTGAGCAGACTACTGAAACCTTTCCTTTCAAGTCTGCAACATCATACCTTAAAAATTATCCTGTTTGATTAAGTTCAGTTCAGTTCAGTTCAGTTCGAACTGCGTTTCTAGAGATGATGTTCTGTAATTGTAATTGTAATTCAAATGAGTTGACTTGACTTCATTCATAGCTTGCTGAAGTCAATGTAATTGTAGAGGGCCCCACTCGTCTTTTGAGGAGTAACCAGCCCACCATTGTAACTAGTTCATGTTTCTTGTGTTTCAGTAAATGTTTTCGTTTATCTTTTCTG ATATGTATCCACCCGCTCTCTCTCATGACAAACGAGGAGACTTCAGCGAATCGTCTTTCCAGCTCTCTGATCGACGATCTTCCAGCTCTAGACAAAAGTAGACAAGAGTTCTGTCTTCTCCTTGTTACCATGACTCCTTCAACGGTCACCTCTTCGACTATACTTGATTTATTTTCTACTGACAATGAGACTTTTTTAGCATTATGGAGAATAAGGAGTGGAGGATCTTTTCCTGCAAATGTTCATGATATAAATCCTTACCAGTGTAAACCTGAAAATTTACCAGATGGAGTTTGGTATTATGTTGAGGGCAATGTGGATGCTGGCTCAAGTTTCGGTCGCTGGAAGCTGAAAGATGGAGATTGTAAACTGTATTCAAGCTCTTCCTTCACTGGAGGGAGAGCAAGTTATGAATATTATGAAGGTCAAGCACCTTATGAGAGTAAAACAGCCTGGGTTATGCAAAAGTACTGGATGAATCAGATGGACCTGCGTGCCACCTTCGAGCAAAAGGAGACCAGCTCACTTTGCAAAGTCTTTCTTGGAGATGAACAGTTTCAAAACAATGAAATGATTCAGAAAACCGAATTTTCTAGTATTCTCAATTCAGAACCAATCCTAAATCATCAGTTGGTTGTTACAGATGGTTCGACTTCGAATAACATGGCGAGTGGATCGACAAGCAAGTCTAAGGTTATGAATGAAGATGACAAGATGGTAGAATTGGCAGATGCAGGAAAACGTTTGGATAATCATTTAGAAGATATCCATCCTGAGATGGATTATTGTTTAGGTGACGACTACTTGGAATTGCTGGATTTAGATAACCCAACATCTTCGTCATCGAGTTCTGAAAATTCTAGTTGCTTGTCCATGTCGTCGAATGAAGATTTTGATACAATGGATGTTCTATGTGATGTAGAACGTGAAATTAACCATGACAGGGGACGAAGAGATGCTGCCTGCATCCATTCCTCTGCACCCTTCAAACTAAAGAAGGAGGTGGTGCATCAAGTGGCTTCAGATTCTCTTGTCACCATCATAAGAAGCCACACAGCGGCCAAAGAGACTCCCAAAACCGATTCGTCGGCGAACATGAAACTCCCAAGCCAGAGTAAGAAAGAAGGGTACAGAATGAAAGGTGCATCATCAAGTTGTCACAACAAGGTGGTCTCAAATGGTGAAGAAACAGGTGTGGATGGAGGAAAGAAGAGGGTTGGCAGAAGGGAGAAGAGTCCAAAGAAGTACTTTTGCTTCTTTGCTCTTTAGATCTTCCTCAGCATCAGTTAGAGTAAGTAAGTTAGTGATGGGATTAGACCAGATTAACAATGGTTTTGAGCAGACTACTGAAACCTTTCCTTTCAAGTCTGCAACATCATACCTTAAAAATTATCCTGTTTGATTAAGTTCAGTTCAGTTCAGTTCAGTTCGAACTGCGTTTCTAGAGATGATGTTCTGTAATTGTAATTGTAATTCAAATGAGTTGACTTGACTTCATTCATAGCTTGCTGAAGTCAATGTAATTGTAGAGGGCCCCACTCGTCTTTTGAGGAGTAACCAGCCCACCATTGTAACTAGTTCATGTTTCTTGTGTTTCAGTAAATGTTTTCGTTTATCTTTTCTG ATGACAAACGAGGAGACTTCAGCGAATCGTCTTTCCAGCTCTCTGATCGACGATCTTCCAGCTCTAGACAAAAGTAGACAAGAGTTCTGTCTTCTCCTTGTTACCATGACTCCTTCAACGGTCACCTCTTCGACTATACTTGATTTATTTTCTACTGACAATGAGACTTTTTTAGCATTATGGAGAATAAGGAGTGGAGGATCTTTTCCTGCAAATGTTCATGATATAAATCCTTACCAGTGTAAACCTGAAAATTTACCAGATGGAGTTTGGTATTATGTTGAGGGCAATGTGGATGCTGGCTCAAGTTTCGGTCGCTGGAAGCTGAAAGATGGAGATTGTAAACTGTATTCAAGCTCTTCCTTCACTGGAGGGAGAGCAAGTTATGAATATTATGAAGGTCAAGCACCTTATGAGAGTAAAACAGCCTGGGTTATGCAAAAGTACTGGATGAATCAGATGGACCTGCGTGCCACCTTCGAGCAAAAGGAGACCAGCTCACTTTGCAAAGTCTTTCTTGGAGATGAACAGTTTCAAAACAATGAAATGATTCAGAAAACCGAATTTTCTAGTATTCTCAATTCAGAACCAATCCTAAATCATCAGTTGGTTGTTACAGATGGTTCGACTTCGAATAACATGGCGAGTGGATCGACAAGCAAGTCTAAGGTTATGAATGAAGATGACAAGATGGTAGAATTGGCAGATGCAGGAAAACGTTTGGATAATCATTTAGAAGATATCCATCCTGAGATGGATTATTGTTTAGGTGACGACTACTTGGAATTGCTGGATTTAGATAACCCAACATCTTCGTCATCGAGTTCTGAAAATTCTAGTTGCTTGTCCATGTCGTCGAATGAAGATTTTGATACAATGGATGTTCTATGTGATGTAGAACGTGAAATTAACCATGACAGGGGACGAAGAGATGCTGCCTGCATCCATTCCTCTGCACCCTTCAAACTAAAGAAGGAGGTGGTGCATCAAGTGGCTTCAGATTCTCTTGTCACCATCATAAGAAGCCACACAGCGGCCAAAGAGACTCCCAAAACCGATTCGTCGGCGAACATGAAACTCCCAAGCCAGAGTAAGAAAGAAGGGTACAGAATGAAAGGTGCATCATCAAGTTGTCACAACAAGGTGGTCTCAAATGGTGAAGAAACAGGTGTGGATGGAGGAAAGAAGAGGGTTGGCAGAAGGGAGAAGAGTCCAAAGAAGTACTTTTGCTTCTTTGCTCTTTAG MTNEETSANRLSSSLIDDLPALDKSRQEFCLLLVTMTPSTVTSSTILDLFSTDNETFLALWRIRSGGSFPANVHDINPYQCKPENLPDGVWYYVEGNVDAGSSFGRWKLKDGDCKLYSSSSFTGGRASYEYYEGQAPYESKTAWVMQKYWMNQMDLRATFEQKETSSLCKVFLGDEQFQNNEMIQKTEFSSILNSEPILNHQLVVTDGSTSNNMASGSTSKSKVMNEDDKMVELADAGKRLDNHLEDIHPEMDYCLGDDYLELLDLDNPTSSSSSSENSSCLSMSSNEDFDTMDVLCDVEREINHDRGRRDAACIHSSAPFKLKKEVVHQVASDSLVTIIRSHTAAKETPKTDSSANMKLPSQSKKEGYRMKGASSSCHNKVVSNGEETGVDGGKKRVGRREKSPKKYFCFFAL Homology
BLAST of CmoCh05G002320 vs. ExPASy Swiss-Prot
Match: A4VCM0 (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.2e-04 Identity = 27/118 (22.88%), Postives = 55/118 (46.61%), Query Frame = 0
BLAST of CmoCh05G002320 vs. ExPASy Swiss-Prot
Match: Q9FFI5 (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.6e-04 Identity = 27/118 (22.88%), Postives = 55/118 (46.61%), Query Frame = 0
BLAST of CmoCh05G002320 vs. ExPASy TrEMBL
Match: A0A6J1HGH3 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111462742 PE=4 SV=1) HSP 1 Score: 812.8 bits (2098), Expect = 6.8e-232 Identity = 413/414 (99.76%), Postives = 413/414 (99.76%), Query Frame = 0
BLAST of CmoCh05G002320 vs. ExPASy TrEMBL
Match: A0A6J1K9U4 (uncharacterized protein LOC111491972 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491972 PE=4 SV=1) HSP 1 Score: 712.6 bits (1838), Expect = 9.5e-202 Identity = 363/380 (95.53%), Postives = 370/380 (97.37%), Query Frame = 0
BLAST of CmoCh05G002320 vs. ExPASy TrEMBL
Match: A0A6J1KC65 (uncharacterized protein LOC111491972 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491972 PE=4 SV=1) HSP 1 Score: 703.4 bits (1814), Expect = 5.8e-199 Identity = 363/393 (92.37%), Postives = 370/393 (94.15%), Query Frame = 0
BLAST of CmoCh05G002320 vs. ExPASy TrEMBL
Match: A0A1S3BBN6 (NAC domain-containing protein 13-like OS=Cucumis melo OX=3656 GN=LOC103487948 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 3.8e-126 Identity = 258/393 (65.65%), Postives = 302/393 (76.84%), Query Frame = 0
BLAST of CmoCh05G002320 vs. ExPASy TrEMBL
Match: A0A5A7VHD5 (NAC domain-containing protein 13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005960 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 2.1e-116 Identity = 239/362 (66.02%), Postives = 282/362 (77.90%), Query Frame = 0
BLAST of CmoCh05G002320 vs. NCBI nr
Match: XP_022962229.1 (NAC domain-containing protein 30-like [Cucurbita moschata]) HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231 Identity = 413/414 (99.76%), Postives = 413/414 (99.76%), Query Frame = 0
BLAST of CmoCh05G002320 vs. NCBI nr
Match: KAG7029371.1 (hypothetical protein SDJN02_07709 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 804.7 bits (2077), Expect = 3.8e-229 Identity = 413/424 (97.41%), Postives = 413/424 (97.41%), Query Frame = 0
BLAST of CmoCh05G002320 vs. NCBI nr
Match: XP_023546400.1 (NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 781.9 bits (2018), Expect = 2.6e-222 Identity = 402/415 (96.87%), Postives = 405/415 (97.59%), Query Frame = 0
BLAST of CmoCh05G002320 vs. NCBI nr
Match: XP_022996849.1 (uncharacterized protein LOC111491972 isoform X2 [Cucurbita maxima]) HSP 1 Score: 712.6 bits (1838), Expect = 2.0e-201 Identity = 363/380 (95.53%), Postives = 370/380 (97.37%), Query Frame = 0
BLAST of CmoCh05G002320 vs. NCBI nr
Match: XP_022996848.1 (uncharacterized protein LOC111491972 isoform X1 [Cucurbita maxima]) HSP 1 Score: 703.4 bits (1814), Expect = 1.2e-198 Identity = 363/393 (92.37%), Postives = 370/393 (94.15%), Query Frame = 0
BLAST of CmoCh05G002320 vs. TAIR 10
Match: AT1G65910.1 (NAC domain containing protein 28 ) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-07 Identity = 41/166 (24.70%), Postives = 77/166 (46.39%), Query Frame = 0
BLAST of CmoCh05G002320 vs. TAIR 10
Match: AT3G03200.1 (NAC domain containing protein 45 ) HSP 1 Score: 49.3 bits (116), Expect = 8.7e-06 Identity = 27/118 (22.88%), Postives = 55/118 (46.61%), Query Frame = 0
BLAST of CmoCh05G002320 vs. TAIR 10
Match: AT3G17730.1 (NAC domain containing protein 57 ) HSP 1 Score: 48.9 bits (115), Expect = 1.1e-05 Identity = 31/117 (26.50%), Postives = 55/117 (47.01%), Query Frame = 0
BLAST of CmoCh05G002320 vs. TAIR 10
Match: AT5G17260.1 (NAC domain containing protein 86 ) HSP 1 Score: 48.9 bits (115), Expect = 1.1e-05 Identity = 27/118 (22.88%), Postives = 55/118 (46.61%), Query Frame = 0
BLAST of CmoCh05G002320 vs. TAIR 10
Match: AT1G54330.1 (NAC domain containing protein 20 ) HSP 1 Score: 48.1 bits (113), Expect = 1.9e-05 Identity = 30/117 (25.64%), Postives = 53/117 (45.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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