CmoCh05G001370 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTAAGCCGGCAGTATCATCTTCAGAGTTGCCTCTTTCAACTGCTCCCGCAAATCCAAATCTGGAATGCAATACGCGGTTCTGTGTTTATGTGAGAATTCCCTTAGAGCCTTCACGAATGCTTCCATTTTTGTTTTCGCTAATTCTTCCACGGTTTCCTTGTTCGGTAATCGCACGTCTTCCATGTCCATTACTGAAAGCAAGGGCTCCCAACATAGCATTTGGTAAGTGTAAGCCGATTCCTCTGCCACTGCTTTGTAATTCTTTCTCATATACTGTTCTCCTAGAAATCTTCCTAGTTCCGTGTTTCGGATCCGCATGTAGATGTACCAGTATGTGTTCATTGAGAAGATATGCGGTAGGATTTTGTCTCTGTAGCGCGATTTTTTGGATTCCACGTTTCTTTGTAGGGCTTCCATTACGTTAGAGAAGGCGTCTTTGAGGAGATTATCCTCGTCTTCCGATTTCAAAACGACTCCGCCCTTCCATGATTTCTGTATTTGGAGAACTTTGGTCATGGCGAAACTGTAGTTGTCACTTGCAAGGTACTTGAGGTAGTTGACGGCGTATCTGACTAGTTTTGGAACCGAGCCGTCTTTTGGAGGAGGAAAGCCATCTGAATTGCCCTCAATTTGAAGGCCGAAGTCCCAAAATACTTTGCTGGACGCGTGTACAAGTAGCTTCTCCAGCTCTCTGTATCGTGTGCGAATTTCTGTGCCAGCTTCGCCGCCGAATGCCTCAGAGAATTCGGAGTTGAGTTCTTCCATGGAGGCGAACATGTCCAAGAGCTTGAACAGTTTCTGCGGCTCTTTTGTGCTTCTGGCGACGCCTTCCCCAAATCGGAAGAAGACGGCCATGATTTTGTCCGCGATCTTCACGAAGCATTCAGGCCACATCAGTCCATCCATGATGGAGCCTAAAACTTGGCTACAGAGTTTCTTCTCGGAAACCAACACGCTCGTGGCTGCGACCTTGAAGTGTTCAATCCACAGAGAAATTGCTGTCTCCAACTTTTCCCACTCCATTTTGTCAATTTCTTCTGGAGTGTATGTTTTGAGATAGACTGGATTCAGCCGCATCAATGTCGTAGCTGCTCTTCTGTATCTAACCTGATTTATGAACGCTAGTTATAGAATTTGGCTGCAATTTTTTCTTACTAAAAGGAAAAAGAAAAGGAAAATATGTTATTTACCTTGACGTAAATATTGATGCAAATATCCAAACAATCGTTGGCAGCGAGGGTTTCAGAAATTCGTTTGGCAGCTTCGATCTCCAACTCGGTACCCATTTCAAACCCCACTGCTTCACCTTCTTTTTCTGCTTCACCATCTTCAAACTTGGGTTTTCTTTGACGCTTTAGATTCTTTAATATGTTTTCAAATTCATCTTGCAGATTAAGCAAAGCTTCGTCAAGCAACCCCTCAAACTTCATGTCGTCAATTTCTGTTTCGTATAGAGCTTTGAGAGTGATCATCGTCTCTTTCAGTCTGTGTGTCCGCTGTGAATCAGCAGCCTTCGTCCTGCTCAAGAACTCTACCACCTCTTGAAGTTTCTGGATCACCGATTCCCCCTCTCGGCTAATCATGCTTATTGATTCATTCAGTCTATCCACACAGTTTACTAGTTTGATCAGCTTCTTCAGACGTTCCTGTGCCGATTTTTCCACCGATAAATTGGCGAAGATCGCGAGAATCTTGCGTTGGAGAAACTCGGATCGCTTAAAGGAATCAAGCAGAACGAGAGCAGGCGAAGCTGCACGATTGATTCTCGTTTCAAGGGCTTTTGTCGTCATCGCCAATGATTGTAGAGGTATTATGCTTCTCGATGCTGTCGCGAGCGATTCGTCGATTGAATCAAGATTCTTCTCCATCTTCTCTAGGCTATCGTTCAATCCCGTCGAGGCTTGGAGGAGGATTTTCAAATCCGAGCATGCTGATTCGAGCTTCTCCATCCTCGAGTCCTCCTCCTCCCTCGGCGCCATTGTTACTACTCCTTGA GTAAGCCGGCAGTATCATCTTCAGAGTTGCCTCTTTCAACTGCTCCCGCAAATCCAAATCTGGAATGCAATACGCGGTTCTGTGTTTATGTGAGAATTCCCTTAGAGCCTTCACGAATGCTTCCATTTTTGTTTTCGCTAATTCTTCCACGGTTTCCTTGTTCGGTAATCGCACGTCTTCCATGTCCATTACTGAAAGCAAGGGCTCCCAACATAGCATTTGGGCTTCCATTACGTTAGAGAAGGCGTCTTTGAGGAGATTATCCTCGTCTTCCGATTTCAAAACGACTCCGCCCTTCCATGATTTCTGTATTTGGAGAACTTTGGTCATGGCGAAACTGCCGAAGTCCCAAAATACTTTGCTGGACGCGTGTACAAGTAGCTTCTCCAGCTCTCTGTATCGTGTGCGAATTTCTGTGCCAGCTTCGCCGCCGAATGCCTCAGAGAATTCGGAGTTGAGTTCTTCCATGGAGGCGAACATGTCCAAGAGCTTGAACAGTTTCTGCGGCTCTTTTGTGCTTCTGGCGACGCCTTCCCCAAATCGGAAGAAGACGGCCATGATTTTGTCCGCGATCTTCACGAAGCATTCAGGCCACATCAGTCCATCCATGATGGAGCCTAAAACTTGGCTACAGAGTTTCTTCTCGGAAACCAACACGCTCGTGGCTGCGACCTTGAAGTGTTCAATCCACAGAGAAATTGCTGTCTCCAACTTTTCCCACTCCATTTTGTCAATTTCTTCTGGAGTATTAAGCAAAGCTTCGTCAAGCAACCCCTCAAACTTCATGTCGTCAATTTCTGTTTCGTATAGAGCTTTGAGAGTGATCATCGTCTCTTTCAGTCTACGTTCCTGTGCCGATTTTTCCACCGATAAATTGGCGAAGATCGCGAGAATCTTGCGTTGGAGAAACTCGGATCGCTTAAAGGAATCAAGCAGAACGAGAGCAGGCGAAGCTGCACGATTGATTCTCGTTTCAAGGGCTTTTGTCGTCATCGCCAATGATTGTAGAGGTATTATGCTTCTCGATGCTGTCGCGAGCGATTCGTCGATTGAATCAAGATTCTTCTCCATCTTCTCTAGGCTATCGTTCAATCCCGTCGAGGCTTGGAGGAGGATTTTCAAATCCGAGCATGCTGATTCGAGCTTCTCCATCCTCGAGTCCTCCTCCTCCCTCGGCGCCATTGTTACTACTCCTTGA ATGCAATACGCGGTTCTGTGTTTATGTGAGAATTCCCTTAGAGCCTTCACGAATGCTTCCATTTTTGTTTTCGCTAATTCTTCCACGGTTTCCTTGTTCGGTAATCGCACGTCTTCCATGTCCATTACTGAAAGCAAGGGCTCCCAACATAGCATTTGGGCTTCCATTACGTTAGAGAAGGCGTCTTTGAGGAGATTATCCTCGTCTTCCGATTTCAAAACGACTCCGCCCTTCCATGATTTCTGTATTTGGAGAACTTTGGTCATGGCGAAACTGCCGAAGTCCCAAAATACTTTGCTGGACGCGTGTACAAGTAGCTTCTCCAGCTCTCTGTATCGTGTGCGAATTTCTGTGCCAGCTTCGCCGCCGAATGCCTCAGAGAATTCGGAGTTGAGTTCTTCCATGGAGGCGAACATGTCCAAGAGCTTGAACAGTTTCTGCGGCTCTTTTGTGCTTCTGGCGACGCCTTCCCCAAATCGGAAGAAGACGGCCATGATTTTGTCCGCGATCTTCACGAAGCATTCAGGCCACATCAGTCCATCCATGATGGAGCCTAAAACTTGGCTACAGAGTTTCTTCTCGGAAACCAACACGCTCGTGGCTGCGACCTTGAAGTGTTCAATCCACAGAGAAATTGCTGTCTCCAACTTTTCCCACTCCATTTTGTCAATTTCTTCTGGAGTATTAAGCAAAGCTTCGTCAAGCAACCCCTCAAACTTCATGTCGTCAATTTCTGTTTCGTATAGAGCTTTGAGAGTGATCATCGTCTCTTTCAGTCTACGTTCCTGTGCCGATTTTTCCACCGATAAATTGGCGAAGATCGCGAGAATCTTGCGTTGGAGAAACTCGGATCGCTTAAAGGAATCAAGCAGAACGAGAGCAGGCGAAGCTGCACGATTGATTCTCGTTTCAAGGGCTTTTGTCGTCATCGCCAATGATTGTAGAGGTATTATGCTTCTCGATGCTGTCGCGAGCGATTCGTCGATTGAATCAAGATTCTTCTCCATCTTCTCTAGGCTATCGTTCAATCCCGTCGAGGCTTGGAGGAGGATTTTCAAATCCGAGCATGCTGATTCGAGCTTCTCCATCCTCGAGTCCTCCTCCTCCCTCGGCGCCATTGTTACTACTCCTTGA MQYAVLCLCENSLRAFTNASIFVFANSSTVSLFGNRTSSMSITESKGSQHSIWASITLEKASLRRLSSSSDFKTTPPFHDFCIWRTLVMAKLPKSQNTLLDACTSSFSSSLYRVRISVPASPPNASENSELSSSMEANMSKSLNSFCGSFVLLATPSPNRKKTAMILSAIFTKHSGHISPSMMEPKTWLQSFFSETNTLVAATLKCSIHREIAVSNFSHSILSISSGVLSKASSSNPSNFMSSISVSYRALRVIIVSFSLRSCADFSTDKLAKIARILRWRNSDRLKESSRTRAGEAARLILVSRAFVVIANDCRGIMLLDAVASDSSIESRFFSIFSRLSFNPVEAWRRIFKSEHADSSFSILESSSSLGAIVTTP Homology
BLAST of CmoCh05G001370 vs. ExPASy TrEMBL
Match: A0A2P5F043 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_131660 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 6.5e-32 Identity = 84/121 (69.42%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of CmoCh05G001370 vs. ExPASy TrEMBL
Match: A0A2P5DI24 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_061170 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.9e-31 Identity = 83/121 (68.60%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of CmoCh05G001370 vs. ExPASy TrEMBL
Match: A0A5P1FPR5 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F13750 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.7e-22 Identity = 94/234 (40.17%), Postives = 112/234 (47.86%), Query Frame = 0
BLAST of CmoCh05G001370 vs. ExPASy TrEMBL
Match: A0A0S3RGG8 (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G267900 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 7.7e-17 Identity = 57/112 (50.89%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of CmoCh05G001370 vs. NCBI nr
Match: PON91135.1 (hypothetical protein TorRG33x02_131660 [Trema orientale]) HSP 1 Score: 148.3 bits (373), Expect = 1.3e-31 Identity = 84/121 (69.42%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of CmoCh05G001370 vs. NCBI nr
Match: PON72967.1 (hypothetical protein PanWU01x14_061170 [Parasponia andersonii]) HSP 1 Score: 146.7 bits (369), Expect = 3.9e-31 Identity = 83/121 (68.60%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of CmoCh05G001370 vs. NCBI nr
Match: XP_020244538.1 (uncharacterized protein LOC109822714 isoform X1 [Asparagus officinalis] >ONK79417.1 uncharacterized protein A4U43_C01F6140 [Asparagus officinalis] >ONK80086.1 uncharacterized protein A4U43_C01F13750 [Asparagus officinalis]) HSP 1 Score: 116.3 bits (290), Expect = 5.7e-22 Identity = 94/234 (40.17%), Postives = 112/234 (47.86%), Query Frame = 0
BLAST of CmoCh05G001370 vs. NCBI nr
Match: BAT79752.1 (hypothetical protein VIGAN_02267900, partial [Vigna angularis var. angularis]) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-16 Identity = 57/112 (50.89%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of CmoCh05G001370 vs. NCBI nr
Match: XP_020244546.1 (uncharacterized protein LOC109822714 isoform X2 [Asparagus officinalis]) HSP 1 Score: 95.5 bits (236), Expect = 1.0e-15 Identity = 63/129 (48.84%), Postives = 79/129 (61.24%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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