CmoCh05G000340 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh05G000340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr05: 123960 .. 125035 (+)
RNA-Seq Expression	CmoCh05G000340
Synteny	CmoCh05G000340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCTGAAAACGCCGCGGGGTTTGTGTTCCGAGTCTCGGGTACACAAATTCGGAATTTTTGTTTTTCTTTTTTTAAAATTCGGAATATTCAATCCTCCCAATGCGACAATAATACCGCATTCTATTTAATAAATCAGACAAATTGCTCACTTTTATATTTATATTTAATATTTTTTTCCTCGTCAATTGAAAATTGAGATGTAAAGAAGAAGAATAATAATAATAATGTTAAAAAGACATGCCTCACCTAAAAATTACCCTATTCCATTCACGGCCATGTCCACCCACCACAGCAGTAGTGTGGGACCCTCTACCAATATTCCCTTTTTTATAACTGTAACTTCAACAAAATAATAATAATAATGATGATAAATAGAATTGAAGTTTAATGAAGGAAGGAATAAAAAAGAAAATGTTGAGAGGGACTGAACATACGTTAGTGGAAGGTTTTGTAACAATTGGAATGGGGAAAGAAGGGGAGAGAGACCCAATGGGAGCACGTGACCTGCCGATGCACTCACCTTTTCTTTTTCGCATGGCCAAAAGGAAAAAGGCGGAGCCATGGGCATCGGGCATCGGGCATCGGGCATCGGGCATCGGACACTCCCCCGTGCCCATACCCATACTACCCATACTACCCATACTACCCATACTACCCACTCCCACAGTTCTTCTTTCATTCCAAATCCCTTTTCTCTAAAGCTACACCATTTTTTTTTTCCAAAAAGCTGCAACTGCCTTTTTACATCTGTATTTGGGTCCGTCCTTGGCTGTTTCTCACGGTCTCTGTTTTCTTGTTTGTTTCTGCAGGGGTTGAGCTGAATGTGTTTTTACTGAACCAAGGTGCTTTCCTTCTCTTTTTTCTCCATCTTCATCTAAAGAAGAAGCAAGGGTATGGTTTTGGAGTCCCTGAGGAGACGACTCAAGCACCATTCACATTCGCCGCTCTCAGATCTCTAGGATCTCACAACTTCAACTTCCCACAACACTCTCGCTTTCTCTCACCTCACTCCCATTCATTCCTCTTCTCTTTTACTATGCTCATCCTTCATACATGCCACAACATGGGCTGA

mRNA sequence

ATGAGGCTGAAAACGCCGCGGGGAAAAAGGCGGAGCCATGGGCATCGGGCATCGGGCATCGGGCATCGGGCATCGGACACTCCCCCGTGCCCATACCCATACTACCCATACTACCCATACTACCCATACTACCCACTCCCACAGTTCTTCTTTCATTCCAAATCCCTTTTCTCTAAAGCTACACCATTTTTTTTTTCCAAAAAGCTGCAACTGCCTTTTTACATCTGTATTTGGGTCCGTCCTTGGCTGTTTCTCACGGTCTCTGTTTTCTTGTTTGTTTCTGCAGGGGTTGAGCTGAATGTGTTTTTACTGAACCAAGGTGCTTTCCTTCTCTTTTTTCTCCATCTTCATCTAAAGAAGAAGCAAGGGTATGGTTTTGGAGTCCCTGAGGAGACGACTCAAGCACCATTCACATTCGCCGCTCTCAGATCTCTAGGATCTCACAACTTCAACTTCCCACAACACTCTCGCTTTCTCTCACCTCACTCCCATTCATTCCTCTTCTCTTTTACTATGCTCATCCTTCATACATGCCACAACATGGGCTGA

Coding sequence (CDS)

ATGAGGCTGAAAACGCCGCGGGGAAAAAGGCGGAGCCATGGGCATCGGGCATCGGGCATCGGGCATCGGGCATCGGACACTCCCCCGTGCCCATACCCATACTACCCATACTACCCATACTACCCATACTACCCACTCCCACAGTTCTTCTTTCATTCCAAATCCCTTTTCTCTAAAGCTACACCATTTTTTTTTTCCAAAAAGCTGCAACTGCCTTTTTACATCTGTATTTGGGTCCGTCCTTGGCTGTTTCTCACGGTCTCTGTTTTCTTGTTTGTTTCTGCAGGGGTTGAGCTGAATGTGTTTTTACTGAACCAAGGTGCTTTCCTTCTCTTTTTTCTCCATCTTCATCTAAAGAAGAAGCAAGGGTATGGTTTTGGAGTCCCTGAGGAGACGACTCAAGCACCATTCACATTCGCCGCTCTCAGATCTCTAGGATCTCACAACTTCAACTTCCCACAACACTCTCGCTTTCTCTCACCTCACTCCCATTCATTCCTCTTCTCTTTTACTATGCTCATCCTTCATACATGCCACAACATGGGCTGA

Protein sequence

MRLKTPRGKRRSHGHRASGIGHRASDTPPCPYPYYPYYPYYPYYPLPQFFFHSKSLFSKATPFFFSKKLQLPFYICIWVRPWLFLTVSVFLFVSAGVELNVFLLNQGAFLLFFLHLHLKKKQGYGFGVPEETTQAPFTFAALRSLGSHNFNFPQHSRFLSPHSHSFLFSFTMLILHTCHNMG

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh05G000340 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G000340 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G000340 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh05G000340 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G000340.1	CmoCh05G000340.1	mRNA