CmoCh04G030980 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACGGAAGAAGGACGAGAAGAAGAGGTTACCGGATCATCCAGAGTAGATGTGGACATGAAGAGCGAGAATGAAGACGGCATAGAGGATGAAGAAGATGAGAGTATGAATGACTACAGCTTTGCCGTTAGTCTTCATACTCCCGAACTCAAACTGCCGATTATTCCCCGGGAACTGGAACAGAAGCCCTGGCGAAAGCAGCACGAACAGAACAACTCCGATCACCACTGGCGCCCAATCCGACATCGTGTCAGAGATATCGTAATAATTTACTAAACCAGAAAAAAAAAATCAAAAGAGGAACTCAAAGTAGCAGAGAGCTTCGGCGAAAAAAGCGAGAGAAAAAGTGGCTTTGCAGAAACGCGATGAAGATGATGAAGAAGAAGAGAAATGGAATTCAACGGAGTTCCACCTTTTCTTTTTCCTCTCTCTCTCTCCGCATCGAAACGAGAAGTAACGCTTTGCTTCATGATTCGAAAATTATGGGAATCCGAGAAGTTATTGTTAATTACGAGAATGACACTAGCTTAGTGGCAATGCTTACTGAACTAGGGAAGTTTATTGTCTGCAGGCGGTAGTGGCTAATTACTTTGTAATCGTTCATGAGAGCCCATTAGTTAAGTGCTAAATGGGCCCAGTGGGCCATATTTGGATGACGACGTGGGCCAGACCATGGACGGGCTCGGCGGTCGAATAAGCGGGAAGGGAAAAAGGGTGGTCGAGAAACAATGGTGGATTTACGTGCAATATGCTCTCGCTTTTTTTATTATTATTATTATTTTTTTACCAATAATTGTATTAAAAAAAAAAAAAAGAGAGAAGAATTATATTGAAAAATGGTTGATATAAATAATATAAAAACAAAATAATAACAGTCGAAAAATTAGCGATATAACCATTTATATATATTTTTTCAAATAGTACACAAATTTATTTCATTCATAAAATGAGTTCATGTTAATGTGAACGCTTTTTGCTTGAGAACGAACCAATATTGATTTAAACTCTCTGTTCAGTTTCTCTGGAATTTTATGTAATGGATTATTTTTCAGAAAAAAATTTAAAGAAATTTATTATTATTTATTTATTTAATTCAAAGAGGTTCTTATTTATAAAACATTACGGTCTCCCCTTCTGTATTAATAAATCTTAATTTGAACTTTTTTTTTTTTTTTATGACAAAGAAAGGGTTTAAAAAGATGGCTTAGTTTAATTTCGCCCTTAAATATTAGGTTATTTACTAAAGAACCATATGTGATAATGCGCATTATATTAACGAAAGAAATTAACGCCAAAAAAAAAAAAAAAAAAAAAGAATAAAGAAAGAAAGAGAAGAAATCGCCAAGAAGTGCTGTGCTGGTCGCATTTGGGCATATAGCTTGGCGTTGTAGACTGGAGAGGAGAAACGTTCAGCCACACGACATTGTGAGATTCCATTCCGGTCCTCGATTTCGCAATTCTAG ATGAAAACGGAAGAAGGACGAGAAGAAGAGGTTACCGGATCATCCAGAGTAGATGTGGACATGAAGAGCGAGAATGAAGACGGCATAGAGGATGAAGAAGATGAGAGTATGAATGACTACAGCTTTGCCGTTAGTCTTCATACTCCCGAACTCAAACTGCCGATTATTCCCCGGGAACTGGAACAGAAGCCCTGGCGAAAGCAGCACGAACAGAACAACTCCGATCACCACTGGCGCCCAATCCGACATCGTGTCAGAGATATCACTGGAGAGGAGAAACGTTCAGCCACACGACATTGTGAGATTCCATTCCGGTCCTCGATTTCGCAATTCTAG ATGAAAACGGAAGAAGGACGAGAAGAAGAGGTTACCGGATCATCCAGAGTAGATGTGGACATGAAGAGCGAGAATGAAGACGGCATAGAGGATGAAGAAGATGAGAGTATGAATGACTACAGCTTTGCCGTTAGTCTTCATACTCCCGAACTCAAACTGCCGATTATTCCCCGGGAACTGGAACAGAAGCCCTGGCGAAAGCAGCACGAACAGAACAACTCCGATCACCACTGGCGCCCAATCCGACATCGTGTCAGAGATATCACTGGAGAGGAGAAACGTTCAGCCACACGACATTGTGAGATTCCATTCCGGTCCTCGATTTCGCAATTCTAG MKTEEGREEEVTGSSRVDVDMKSENEDGIEDEEDESMNDYSFAVSLHTPELKLPIIPRELEQKPWRKQHEQNNSDHHWRPIRHRVRDITGEEKRSATRHCEIPFRSSISQF Homology
BLAST of CmoCh04G030980 vs. ExPASy TrEMBL
Match: A0A5D3BWV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00140 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.9e-20 Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of CmoCh04G030980 vs. ExPASy TrEMBL
Match: A0A0A0LT04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406100 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 8.4e-12 Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of CmoCh04G030980 vs. ExPASy TrEMBL
Match: A0A445GEX9 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_042794 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 8.7e-09 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CmoCh04G030980 vs. ExPASy TrEMBL
Match: A0A0B2R840 (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040169 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 8.7e-09 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CmoCh04G030980 vs. ExPASy TrEMBL
Match: A0A5A7QQI9 (Uncharacterized protein OS=Striga asiatica OX=4170 GN=STAS_24622 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08 Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of CmoCh04G030980 vs. NCBI nr
Match: KAG6602686.1 (Actin-related protein 2/3 complex subunit 2A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 173.3 bits (438), Expect = 1.2e-39 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0
BLAST of CmoCh04G030980 vs. NCBI nr
Match: KAA0056546.1 (hypothetical protein E6C27_scaffold288G00480 [Cucumis melo var. makuwa] >TYK02716.1 hypothetical protein E5676_scaffold1154G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-19 Identity = 59/91 (64.84%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of CmoCh04G030980 vs. NCBI nr
Match: KAG6578364.1 (hypothetical protein SDJN03_22812, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.1 bits (222), Expect = 1.3e-14 Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 0
BLAST of CmoCh04G030980 vs. NCBI nr
Match: KAE8652261.1 (hypothetical protein Csa_022581 [Cucumis sativus]) HSP 1 Score: 86.7 bits (213), Expect = 1.4e-13 Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of CmoCh04G030980 vs. NCBI nr
Match: KAG5111059.1 (hypothetical protein JHK82_040282 [Glycine max]) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09 Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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