
CmoCh04G030150 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCAAAGCTTAACAACTTCGAAGGGCGCGAATCACAATTCACAACTCTTTAACTCCTTTTTCTCTCTCGAGTTTGTCTTCGCATCTCCGCACAACTTTGCAGCTTTTCTCTGCGCTTTGTTTGCTCTACTTTCTGTCTCTTCCTCCGCTGAGTTCGAGTTCACCTCTCACTCTCCTCCATGGAGTCCTCCGTTACGCTTCGATCCTTTCACTGTAAGTCGTTCTCTCTTTCTCCCTATCAATGTCCTTGTATGTAATTTTCGTTCGTTCCAGTTGTCTGGTTGCTTTGTGCAGTGATTTAGACTTTTATTGACTGTCGCGAGCTTTTCCTCCTTTTCTGTAATGTTAATTTGAAAGCTGATTATTGTATGTTTGATGTTGATTGAGTATAATTGCAATGTTGATTTACGAGTGAACCGAGCTCCTCCAACGGTGAAGTTTCATTTTAGAAATGGAGTATAGTGTAGCATTTCCAGATCTAGTGTTCGATTTGTTTGATTGTTTAGTTATTTTGAGATATGATAATCGACGGCGTCGGATTTTCTTCAGTCATTGCATGTAATTCTTTGTGTTGTGAAAGAAATCCTTTATGATTAGTTAAAGAAGAGGATATGCCTCTCTTGAATTCTCTTTAGGTCTTGGTATGGTCGCAGGCAGCATACCTTATTTAGCAATTTAGTTTTGTGGATTCAGAGATAGTGGTTTGCTTTCGGCCTTTGGTTATCAGTAGCCTGATAATGAAAATTGTGAAGAAAAGGTTCGATATCGCATTTTAAAGAGGTTCTTGAGATTCTAACATTTTTACGCTTCCTTGTTTTGTTTTGTTTTTTTAAAAAACAAACCGTTCAAAATTGATTGCCGCGCTTATTGTCACCATCTGTTTCCAGGATACATAACGTAGAGATAAACTTCGTTGTATCTCCGGAATTACATCAAACTTCTATTCTTCTTCTTTAGTTTTCCCGATTTTTCACTTTATTTGTCACAGATTAGCTTAAGTAATCGCTCACCACGAGAATCTAAAATGTGTATATTATTCTGTGTGATTTCAGATTTTGCAGGTGGTTCACGTCTGCAGTTAATTGAGAAACCAAGTAAAATTTCTGTGTGTAATATTAAAAAGTCGTGCATTCAAGGACTATCAGTTTTTGGCAAGCCAATCTATATTCCAACAAACCAGAAGAGAACGGTGGTATTGTGCACAAAGACGCCAGACGTTTCTGAAACTGCTAAACCCAATGGTAAGCTTTATTGTCCTTGAAGTTTCAGTATGGTTGTGTCCTGTGATTAATGTCCGTTCTTCCTCTGACTGTACATGCGTTAGCTGTTCTTATCCATTACAGTAGCAAGTGTTCCTGCAAATATTATGCTTTTTTAATGCTAGCTATTGATGTCGTAATTTGTTTGATCGTTATGCATCATCTTTTTTAATTTATAAATTCATTTGTCTAGACTCGGTTGGGTAAAATAATGACCATATTTCTATTGCATTAAGAAGAAAGGTAGATGTATAATCTGGTTTTAAGGACACGTATCAGAAAGAAATTCAAGTCATGCTGTCTCCCAAATCCAACTCTCCCTGCCAAGCCTTGTTTCTTACTTCCCTTTTTGTGCAGGAATTCTCTCTCAGCCCCAAAATGATTCCTTATTCTAGGGCTATCGGTCCCCATTCTAAGCAACCCATGCAGAAAATTTAAAATTCCCCTTAGTTGATGTGGCATTACCAAATGATTAAAATTCCCCTATCAAAGATGTCTTAATTATGCACGAGTAGTGCATGTGTTTCATCTGTGTTTCATCTGTGTTGAGCTATTTTGGTTTCTTAGTTGTAACTTTACTATTATATTTCTCTTCAAACTATCATTATTAATCGTTCTATACATTTTCCACTGAAAATATGGATAGGCATTGATTGAACTATCCAGTCACATTCGTTATTGGCTTTTATACCTTCTACTTGTTACTGACAGATAGTGTACTCCGACGTTCAGCGCAGAAAACTCCTGCAGCGAATGCAACTTTTCCTGATGGACTTGAAGTGAGTTCAAACTTAATCTTCTGTTTCTGTTTGTTTCCTCATGAAAAGAAGGCACTTTTCATTGGGCATCCCTCTTCATTAGTAAACATTAGAACTTCATCTGAAACTTCTTTTTTCGTGAAAGTTACTGAAATTCACATGTTATGAGCTTCTCCTTCATGGTTTATATACGCATATTATAGACCTTGCAATATGGTACAGAATTAGAGTGCATAGCCACCTGCTGAAACATAATGGGCCTTGGAATTATTCCCAATGTTTCAGAGAAATGTTTTCTTCTTTTACTTGTGAGTGTATTTGTCAGTGCTTTGCAAAGGACAACCGTAGGCTGTGTAAAATCTAGAAGGCCTAACACCGGAACATTCACCATGGCCTAATTCAATGTTTCAAAAGCCCGTTGTGCTCCTCATTCCAGCCAAAAATATTTTTCAACAACTGTTGTTAAATGCGACAGTACTATGGTTGGCCACAAACTTTCGGTAGTATCCAGTTAGATCGAGAAACCCCTTGTCTTCATTGTTTTTGGAGAATCTAGTCCAACAAAGGAGAACTCAAAGATAAATCTACCTCTGTCGACTTCATATCCAGAATTTCCAAGGTGCCGGCATCTCTTCCTCCAAAATATCTGCACCAGCCAATTTTTCATTGAAGTCTGTCTCCTCTCTTCATCAAGATTGATGCACCATCACTTGAAGCTATTTTTTCTTACTATGACGGGAATAATTTTCTTCACACTTCGAAATATTTACATCACTTGTATTCATATTTTTGCCTCAGGTCCTGATTAATCTCAACCAACAAGAAAAAAAAAAGTGTTTATCTTTTTAAAATGAAATGTAAATCCTCAGTTTCACGCGTAAATTTTCTTACTCAAATATTTTCGTCACTTGGGCCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTTATACACTTTAGTGACTTGGGGTTGTCAAGTTTCACCAACACTCCCATGAAGTTCTTTGTTTGTTTGTTTTTTTTGGGTTCAAATGAAAGTTGATTAATTGTAATGTTTTCTTTGGATATTTCATTCTATCCTTGTGAATTTAACTAACTTATCTACTCTTTGAAATCACCAGGCATTGGTGCTGGAGGTCTGTGATGAAACCGAGATTGCTGAACTAAAACTAAAGGTGTATTGAAACTCCAATTTTGTACAATGTTTCTTTTTTATTTGAACAGCCACGTGAATAGTTTTTTCAGATTATTCTTCACGTAATATCATGATTTTCATGAGAATGAAAGGAACACTGTACGAGAGACTCTTATATATTATATTGATATACATCACATGGTTGTTCAACCAACGAAAAAATTCTTGATTTTGCGGTTGTTTGAATCACTTTGCTTAGCCTTGGACTAAGTTTCAGGGACATAAAGTTGTAGGTGAGTCAATTTATACATGTATTGACTAACCTTCTGCTATCTACTACAGGTTGGAGAGTTTGAAATGCATTTGAAGCGGAATCTTGGAGTCGTAAAAGCTCCTCTGTCTGCCATTTCTCCAACAGTACCTCCGCCGATTCCTTCTGAACCCATGGTTGAGTCAGCTGCTACTGCACCAGAACCTCTGAAACCTTCTCCAGAGAAAACAACTCCTTTTACCAATGTTCCCATGGAGAAGTCGTTGAAGCTAGCAGCTTTGGAGGCATCTGGAACAAAAGGATATGTTCTGGTTTCTTCTCCTACGGTATGTGATGCATTAATGTGTAAGGTTCTGTGTAATCTAAAAAGAAAGAACTGCAAAATCTGAGAAATCCTAGTAATTATAACTTGGCTCTTGCTTTTTTCATTAGGTTGGATCATTCCTAACGGGCAGGACAATAAAAGGAAAAAAGCAGCCTCCGATCTGCAAAGAGGTATTGCTTTCAAGCCTGCTTATCTTCAATGACATTTTAACTTTCAAACTGTTGAATTACGGGAAGAGGATCTCGTGACTTTAATTGGAAAACCTTGGATAATCCGGATCGAATAATAAGAAAGTTTTTTTTATTTTTTTATTTTATTTACCTGCTTGTTCAGTTCTTTAGATTAACTGGAACACAACCCGGCCCATTAAACTATGGACTACCAGGCCCATTAATGATCTAACTAACCTCAGTCATCCTAACATGTTTACGACTTTTCAGAACCTTATTTTCCGATTTTAGTTTTACATTTGTGTCAAATTTTAGCAAACCACATTAGTTTATGAATTGGCGGCTTCTTTCATGCACAGAAAGATGTAATAAAGGAAGGACAAGTAATTGGATACGTCGATCAGTTTGGCACCGAACTTCCTGTAAAGGTACATATGAACCTTTCAATGTAATATTTTTGTGCGAGACCTCCATAACATCCTTTGATGGTAATGCTAATTTTTATCCTCAATTCATTGTTGAGCAGTCAAATGTGGATGGAGAAGTATTGAGGGTTCTCTTCAAGGAAGGAGGTACGTACGATATTCTGTCTATTCAGACTATTAAGAAAGTGTTACAAGATGTCTCAAAATTGAAAATCAGTTGGTTTGATACTCTTATCTTTAGAAAATGTGGAAGTGCAAAATCTTACTATATTTATGGCGTTCCTCAGAAGTCTTTAACTAGTTCAACCTGAAGTTTACTGAGAGGTCCTACTAATTTTATTAATGGTTTGCAGAAGCTGTTGGCTATGGCGACCCCCTGATTGCTGTCTTGCCAGCGTTCCATGGAATCAGGTGATGATCCTTATAAATCTTTTTGAAGATCAAGGTTTGCAGATTTCTGATTTACGTCATTCTTTTTTGTCTACTGTCTCTACCACTGTCTCTCTACCGGAACGTGGTTTAGACAACGAGGGTTTAATCAACCTGGTACCTATACTTTTTTTGTGGATTGATTTCTTTAATTTATCTTTTTGATAAAAGATTTCGTTAATTTCTTTCCTCTCTTTTATTATAGTTATTTGTATGTGATAGTTACTAATAAAGGGACGGCCACCGGCTGCCTCAGTTTTTGGAAACAAACGGTCGGAGTCCAAATTGGTCCACATCATATTAGTAGGGTGGCTCACCATCTTATATGACCAATCCATGTTTGAAAGCAGCAGGGTAAATCATTTTATAATTAAAAAGGAG CTTCAAAGCTTAACAACTTCGAAGGGCGCGAATCACAATTCACAACTCTTTAACTCCTTTTTCTCTCTCGAGTTTGTCTTCGCATCTCCGCACAACTTTGCAGCTTTTCTCTGCGCTTTGTTTGCTCTACTTTCTGTCTCTTCCTCCGCTGAGTTCGAGTTCACCTCTCACTCTCCTCCATGGAGTCCTCCGTTACGCTTCGATCCTTTCACTATTTTGCAGGTGGTTCACGTCTGCAGTTAATTGAGAAACCAAGTAAAATTTCTGTGTGTAATATTAAAAAGTCGTGCATTCAAGGACTATCAGTTTTTGGCAAGCCAATCTATATTCCAACAAACCAGAAGAGAACGGTGGTATTGTGCACAAAGACGCCAGACGTTTCTGAAACTGCTAAACCCAATGATAGTGTACTCCGACGTTCAGCGCAGAAAACTCCTGCAGCGAATGCAACTTTTCCTGATGGACTTGAAGCATTGGTGCTGGAGGTCTGTGATGAAACCGAGATTGCTGAACTAAAACTAAAGGTTGGAGAGTTTGAAATGCATTTGAAGCGGAATCTTGGAGTCGTAAAAGCTCCTCTGTCTGCCATTTCTCCAACAGTACCTCCGCCGATTCCTTCTGAACCCATGGTTGAGTCAGCTGCTACTGCACCAGAACCTCTGAAACCTTCTCCAGAGAAAACAACTCCTTTTACCAATGTTCCCATGGAGAAGTCGTTGAAGCTAGCAGCTTTGGAGGCATCTGGAACAAAAGGATATGTTCTGGTTTCTTCTCCTACGGTTGGATCATTCCTAACGGGCAGGACAATAAAAGGAAAAAAGCAGCCTCCGATCTGCAAAGAGAAAGATGTAATAAAGGAAGGACAAGTAATTGGATACGTCGATCAGTTTGGCACCGAACTTCCTGTAAAGTCAAATGTGGATGGAGAAGTATTGAGGGTTCTCTTCAAGGAAGGAGAAGCTGTTGGCTATGGCGACCCCCTGATTGCTGTCTTGCCAGCGTTCCATGGAATCAGGTGATGATCCTTATAAATCTTTTTGAAGATCAAGGTTTGCAGATTTCTGATTTACGTCATTCTTTTTTGTCTACTGTCTCTACCACTGTCTCTCTACCGGAACGTGGTTTAGACAACGAGGGTTTAATCAACCTGGTACCTATACTTTTTTTGTGGATTGATTTCTTTAATTTATCTTTTTGATAAAAGATTTCGTTAATTTCTTTCCTCTCTTTTATTATAGTTATTTGTATGTGATAGTTACTAATAAAGGGACGGCCACCGGCTGCCTCAGTTTTTGGAAACAAACGGTCGGAGTCCAAATTGGTCCACATCATATTAGTAGGGTGGCTCACCATCTTATATGACCAATCCATGTTTGAAAGCAGCAGGGTAAATCATTTTATAATTAAAAAGGAG ATGGAGTCCTCCGTTACGCTTCGATCCTTTCACTATTTTGCAGGTGGTTCACGTCTGCAGTTAATTGAGAAACCAAGTAAAATTTCTGTGTGTAATATTAAAAAGTCGTGCATTCAAGGACTATCAGTTTTTGGCAAGCCAATCTATATTCCAACAAACCAGAAGAGAACGGTGGTATTGTGCACAAAGACGCCAGACGTTTCTGAAACTGCTAAACCCAATGATAGTGTACTCCGACGTTCAGCGCAGAAAACTCCTGCAGCGAATGCAACTTTTCCTGATGGACTTGAAGCATTGGTGCTGGAGGTCTGTGATGAAACCGAGATTGCTGAACTAAAACTAAAGGTTGGAGAGTTTGAAATGCATTTGAAGCGGAATCTTGGAGTCGTAAAAGCTCCTCTGTCTGCCATTTCTCCAACAGTACCTCCGCCGATTCCTTCTGAACCCATGGTTGAGTCAGCTGCTACTGCACCAGAACCTCTGAAACCTTCTCCAGAGAAAACAACTCCTTTTACCAATGTTCCCATGGAGAAGTCGTTGAAGCTAGCAGCTTTGGAGGCATCTGGAACAAAAGGATATGTTCTGGTTTCTTCTCCTACGGTTGGATCATTCCTAACGGGCAGGACAATAAAAGGAAAAAAGCAGCCTCCGATCTGCAAAGAGAAAGATGTAATAAAGGAAGGACAAGTAATTGGATACGTCGATCAGTTTGGCACCGAACTTCCTGTAAAGTCAAATGTGGATGGAGAAGTATTGAGGGTTCTCTTCAAGGAAGGAGAAGCTGTTGGCTATGGCGACCCCCTGATTGCTGTCTTGCCAGCGTTCCATGGAATCAGGTGA MESSVTLRSFHYFAGGSRLQLIEKPSKISVCNIKKSCIQGLSVFGKPIYIPTNQKRTVVLCTKTPDVSETAKPNDSVLRRSAQKTPAANATFPDGLEALVLEVCDETEIAELKLKVGEFEMHLKRNLGVVKAPLSAISPTVPPPIPSEPMVESAATAPEPLKPSPEKTTPFTNVPMEKSLKLAALEASGTKGYVLVSSPTVGSFLTGRTIKGKKQPPICKEKDVIKEGQVIGYVDQFGTELPVKSNVDGEVLRVLFKEGEAVGYGDPLIAVLPAFHGIR Homology
BLAST of CmoCh04G030150 vs. ExPASy Swiss-Prot
Match: Q58628 (Pyruvate carboxylase subunit B OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=pycB PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 9.1e-04 Identity = 21/52 (40.38%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of CmoCh04G030150 vs. ExPASy TrEMBL
Match: A0A6J1E5I5 (uncharacterized protein LOC111430775 OS=Cucurbita moschata OX=3662 GN=LOC111430775 PE=4 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmoCh04G030150 vs. ExPASy TrEMBL
Match: A0A6J1JUK7 (uncharacterized protein LOC111487634 OS=Cucurbita maxima OX=3661 GN=LOC111487634 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 5.5e-145 Identity = 268/279 (96.06%), Postives = 271/279 (97.13%), Query Frame = 0
BLAST of CmoCh04G030150 vs. ExPASy TrEMBL
Match: A0A6J1C1S0 (uncharacterized protein LOC111006634 OS=Momordica charantia OX=3673 GN=LOC111006634 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.4e-126 Identity = 229/279 (82.08%), Postives = 253/279 (90.68%), Query Frame = 0
BLAST of CmoCh04G030150 vs. ExPASy TrEMBL
Match: A0A6J1K337 (uncharacterized protein LOC111489625 OS=Cucurbita maxima OX=3661 GN=LOC111489625 PE=4 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 3.5e-123 Identity = 230/279 (82.44%), Postives = 250/279 (89.61%), Query Frame = 0
BLAST of CmoCh04G030150 vs. ExPASy TrEMBL
Match: A0A6J1FI89 (uncharacterized protein LOC111445655 OS=Cucurbita moschata OX=3662 GN=LOC111445655 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 6.6e-122 Identity = 227/279 (81.36%), Postives = 248/279 (88.89%), Query Frame = 0
BLAST of CmoCh04G030150 vs. NCBI nr
Match: XP_022922951.1 (uncharacterized protein LOC111430775 [Cucurbita moschata]) HSP 1 Score: 545.4 bits (1404), Expect = 2.8e-151 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmoCh04G030150 vs. NCBI nr
Match: KAG6602605.1 (hypothetical protein SDJN03_07838, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 542.0 bits (1395), Expect = 3.1e-150 Identity = 277/279 (99.28%), Postives = 278/279 (99.64%), Query Frame = 0
BLAST of CmoCh04G030150 vs. NCBI nr
Match: KAG7033285.1 (accB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 538.9 bits (1387), Expect = 2.6e-149 Identity = 275/279 (98.57%), Postives = 277/279 (99.28%), Query Frame = 0
BLAST of CmoCh04G030150 vs. NCBI nr
Match: XP_023535834.1 (uncharacterized protein LOC111797142 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 534.6 bits (1376), Expect = 4.9e-148 Identity = 274/279 (98.21%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of CmoCh04G030150 vs. NCBI nr
Match: XP_022990878.1 (uncharacterized protein LOC111487634 [Cucurbita maxima]) HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144 Identity = 268/279 (96.06%), Postives = 271/279 (97.13%), Query Frame = 0
BLAST of CmoCh04G030150 vs. TAIR 10
Match: AT3G56130.1 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 228.8 bits (582), Expect = 5.4e-60 Identity = 128/227 (56.39%), Postives = 155/227 (68.28%), Query Frame = 0
BLAST of CmoCh04G030150 vs. TAIR 10
Match: AT3G56130.2 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.7e-58 Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 0
BLAST of CmoCh04G030150 vs. TAIR 10
Match: AT3G56130.4 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 214.9 bits (546), Expect = 8.1e-56 Identity = 124/227 (54.63%), Postives = 149/227 (65.64%), Query Frame = 0
BLAST of CmoCh04G030150 vs. TAIR 10
Match: AT3G56130.3 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 198.0 bits (502), Expect = 1.0e-50 Identity = 105/168 (62.50%), Postives = 127/168 (75.60%), Query Frame = 0
BLAST of CmoCh04G030150 vs. TAIR 10
Match: AT1G52670.1 (Single hybrid motif superfamily protein ) HSP 1 Score: 132.9 bits (333), Expect = 4.0e-31 Identity = 75/188 (39.89%), Postives = 115/188 (61.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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