CmoCh04G029000 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTAGGTTTACTGAGGTTTACCATTTTTGCTTCCAAACATAGCATTAATGCCTTTGAATTGCATACTATAAATAGCTTTGGACCTGAACTCTAAAGCCTCAAATCTTCTCTTTAATCTTAACAAAAGAACCAGAGAGAAAAGAAATGGGTAACTATGGAGTTTTCTCTGTTCTTCTCCTTTCATGCTTCGTATTTTCATCTGGTAAGGTTTTAATTCTTAGGATTCTTTATTTACATACACATATTTGGTTAAATATTGGGTTTTGATCCGTTTGTTTTTATAAGGATTTGGAGTTGAAGCAGTGATCGGAGCTGCGGATGAGGTCTTTGTTACTTCAACCAAGGTACTCCCAAATTTTTGTATATCCATCCAATGTTTGGTAAGACGTGCTTTGCATTACTTATTATCTAAAACAATTTAGAACAAACTTAATTATATGATCCGCTAAAAGTACTTGAAATCAACCATTTTTATTTGTTCTAACTAAACACTACCATTTTTTTTTTATATAGAAATTTTTTTAGTCATACGTGAAGGAACATACTAATATATATTTATGTTGGAGCTAAAATGAACTTTTGTGTGTTCGTTTGGTAGGGAAAGGAAGTATATTCGAGGAAGATGAGGATGGAAGCATTTAATTCTTTTGTTACTCCACTTAAAGTTCCATCCGTTGACTCTGTTGTTCCTCCTGTTCCTCCTCCCAAAGTTCTACCGGTTGACTTTGTTGTTTCTCCATCCAAAGTACCATCTATTAACCATGTTGCTCCTCCATCCAGAGTATCATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTATACCTCCACTCGGAAAACAATCTGTCAACTCTGTACCTCCACTTAGAGTACAATCTGTCAACTCAGTGCCTCCACCTAGAGTACAATCTGTCAACTCTATACCTCCACACAGAGAACAATCTGTCAACTCTGTACCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCCCCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTATAA TTTTTAGGTTTACTGAGGTTTACCATTTTTGCTTCCAAACATAGCATTAATGCCTTTGAATTGCATACTATAAATAGCTTTGGACCTGAACTCTAAAGCCTCAAATCTTCTCTTTAATCTTAACAAAAGAACCAGAGAGAAAAGAAATGGGTAACTATGGAGTTTTCTCTGTTCTTCTCCTTTCATGCTTCGTATTTTCATCTGGATTTGGAGTTGAAGCAGTGATCGGAGCTGCGGATGAGGTCTTTGTTACTTCAACCAAGGGAAAGGAAGTATATTCGAGGAAGATGAGGATGGAAGCATTTAATTCTTTTGTTACTCCACTTAAAGTTCCATCCGTTGACTCTGTTGTTCCTCCTGTTCCTCCTCCCAAAGTTCTACCGGTTGACTTTGTTGTTTCTCCATCCAAAGTACCATCTATTAACCATGTTGCTCCTCCATCCAGAGTATCATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTATACCTCCACTCGGAAAACAATCTGTCAACTCTGTACCTCCACTTAGAGTACAATCTGTCAACTCAGTGCCTCCACCTAGAGTACAATCTGTCAACTCTATACCTCCACACAGAGAACAATCTGTCAACTCTGTACCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCCCCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTATAA ATGGGTAACTATGGAGTTTTCTCTGTTCTTCTCCTTTCATGCTTCGTATTTTCATCTGGATTTGGAGTTGAAGCAGTGATCGGAGCTGCGGATGAGGTCTTTGTTACTTCAACCAAGGGAAAGGAAGTATATTCGAGGAAGATGAGGATGGAAGCATTTAATTCTTTTGTTACTCCACTTAAAGTTCCATCCGTTGACTCTGTTGTTCCTCCTGTTCCTCCTCCCAAAGTTCTACCGGTTGACTTTGTTGTTTCTCCATCCAAAGTACCATCTATTAACCATGTTGCTCCTCCATCCAGAGTATCATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTATACCTCCACTCGGAAAACAATCTGTCAACTCTGTACCTCCACTTAGAGTACAATCTGTCAACTCAGTGCCTCCACCTAGAGTACAATCTGTCAACTCTATACCTCCACACAGAGAACAATCTGTCAACTCTGTACCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCCCCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTATAA MGNYGVFSVLLLSCFVFSSGFGVEAVIGAADEVFVTSTKGKEVYSRKMRMEAFNSFVTPLKVPSVDSVVPPVPPPKVLPVDFVVSPSKVPSINHVAPPSRVSSVNSVPPPRVQSVNSIPPLGKQSVNSVPPLRVQSVNSVPPPRVQSVNSIPPHREQSVNSVPPPRVQSVNSVPPPRVQSVNSVPPPRVQSVNSVPPPRV Homology
BLAST of CmoCh04G029000 vs. ExPASy TrEMBL
Match: A0A6J1GUF7 (early nodulin-75-like OS=Cucurbita moschata OX=3662 GN=LOC111457216 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.3e-100 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CmoCh04G029000 vs. ExPASy TrEMBL
Match: A0A6J1JNG2 (neural Wiskott-Aldrich syndrome protein-like OS=Cucurbita maxima OX=3661 GN=LOC111486900 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 5.1e-52 Identity = 121/154 (78.57%), Postives = 129/154 (83.77%), Query Frame = 0
BLAST of CmoCh04G029000 vs. ExPASy TrEMBL
Match: A0A6J1GT66 (protein diaphanous homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457209 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 7.0e-33 Identity = 112/189 (59.26%), Postives = 131/189 (69.31%), Query Frame = 0
BLAST of CmoCh04G029000 vs. ExPASy TrEMBL
Match: A0A6Q2Z8M1 (Zinc finger FYVE domain-containing protein 1-like OS=Esox lucius OX=8010 GN=ZFYVE1 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11 Identity = 54/112 (48.21%), Postives = 60/112 (53.57%), Query Frame = 0
BLAST of CmoCh04G029000 vs. ExPASy TrEMBL
Match: A0A674DU99 (Uncharacterized protein OS=Salmo trutta OX=8032 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.6e-11 Identity = 53/136 (38.97%), Postives = 69/136 (50.74%), Query Frame = 0
BLAST of CmoCh04G029000 vs. NCBI nr
Match: XP_022955175.1 (early nodulin-75-like [Cucurbita moschata]) HSP 1 Score: 374.8 bits (961), Expect = 4.7e-100 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CmoCh04G029000 vs. NCBI nr
Match: KAG6602502.1 (hypothetical protein SDJN03_07735, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 251.5 bits (641), Expect = 6.0e-63 Identity = 148/200 (74.00%), Postives = 157/200 (78.50%), Query Frame = 0
BLAST of CmoCh04G029000 vs. NCBI nr
Match: XP_022989830.1 (neural Wiskott-Aldrich syndrome protein-like [Cucurbita maxima]) HSP 1 Score: 214.2 bits (544), Expect = 1.1e-51 Identity = 121/154 (78.57%), Postives = 129/154 (83.77%), Query Frame = 0
BLAST of CmoCh04G029000 vs. NCBI nr
Match: XP_023527229.1 (uncharacterized protein LOC111790526 [Cucurbita pepo subsp. pepo] >XP_023527237.1 uncharacterized protein LOC111790526 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 188.3 bits (477), Expect = 6.2e-44 Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of CmoCh04G029000 vs. NCBI nr
Match: XP_022955163.1 (protein diaphanous homolog 1-like [Cucurbita moschata]) HSP 1 Score: 150.6 bits (379), Expect = 1.4e-32 Identity = 112/189 (59.26%), Postives = 131/189 (69.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|