CmoCh04G028170 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh04G028170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionLOB domain-containing protein
LocationCmo_Chr04: 20199087 .. 20199554 (+)
RNA-Seq ExpressionCmoCh04G028170
SyntenyCmoCh04G028170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCATCCAGCTTCTCAAATTCACCATGTGCAGCATGCAAGTTCCTCCGAAGAAAATGCTTAGCGGACTGCATATTTGCGCCCTACTTTCCACCCGAAGAGCCCACCAAGTTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTCCTCCATGAGGTCCACCCCCATCAGCGCGAGGACGCCGTCAATTCTCTTGCCTACGAGGCCGAGGCTCGTATGAAAGACCCCGTCTATGGCTGCGTCGGAGCCATCTCTATCCTTCAGCGACAAGTCATTCGCCTCCAGAAGGAGCTTGACGCTACGAATGCTGATTTGGTTCGATATGCCAGCGGGGGCGCTCGCCCGTATGGACGGAGGGCAGCAGCGCAGTCTGGTGTGTGTTTTATTTCCCCCTTGAATACTAATGATCGTCATGATCCATATTGCCGTGATAAAGAGGAACAAAATTGA

mRNA sequence

ATGGCTTCTTCATCCAGCTTCTCAAATTCACCATGTGCAGCATGCAAGTTCCTCCGAAGAAAATGCTTAGCGGACTGCATATTTGCGCCCTACTTTCCACCCGAAGAGCCCACCAAGTTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTCCTCCATGAGGTCCACCCCCATCAGCGCGAGGACGCCGTCAATTCTCTTGCCTACGAGGCCGAGGCTCGTATGAAAGACCCCGTCTATGGCTGCGTCGGAGCCATCTCTATCCTTCAGCGACAAGTCATTCGCCTCCAGAAGGAGCTTGACGCTACGAATGCTGATTTGGTTCGATATGCCAGCGGGGGCGCTCGCCCGTATGGACGGAGGGCAGCAGCGCAGTCTGGTGTGTGTTTTATTTCCCCCTTGAATACTAATGATCGTCATGATCCATATTGCCGTGATAAAGAGGAACAAAATTGA

Coding sequence (CDS)

ATGGCTTCTTCATCCAGCTTCTCAAATTCACCATGTGCAGCATGCAAGTTCCTCCGAAGAAAATGCTTAGCGGACTGCATATTTGCGCCCTACTTTCCACCCGAAGAGCCCACCAAGTTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTCCTCCATGAGGTCCACCCCCATCAGCGCGAGGACGCCGTCAATTCTCTTGCCTACGAGGCCGAGGCTCGTATGAAAGACCCCGTCTATGGCTGCGTCGGAGCCATCTCTATCCTTCAGCGACAAGTCATTCGCCTCCAGAAGGAGCTTGACGCTACGAATGCTGATTTGGTTCGATATGCCAGCGGGGGCGCTCGCCCGTATGGACGGAGGGCAGCAGCGCAGTCTGGTGTGTGTTTTATTTCCCCCTTGAATACTAATGATCGTCATGATCCATATTGCCGTGATAAAGAGGAACAAAATTGA

Protein sequence

MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARPYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
Homology
BLAST of CmoCh04G028170 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 208.8 bits (530), Expect = 4.5e-53
Identity = 95/111 (85.59%), Postives = 108/111 (97.30%), Query Frame = 0

Query: 5   SSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQR 64
           S+++NSPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+LHEV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 65  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYA 116
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV+RLQ+EL+ TNADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

BLAST of CmoCh04G028170 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.0e-49
Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRY 115
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

BLAST of CmoCh04G028170 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.8e-42
Identity = 81/118 (68.64%), Postives = 100/118 (84.75%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSS  +NSPCAACKFLRRKC  +C+FAPYFPP++P KFANVHK+FGASNV+KLL+E+H
Sbjct: 1   MASSS--TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGG 119
           P QREDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    ++L +Y S G
Sbjct: 61  PSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLG 116

BLAST of CmoCh04G028170 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.5e-40
Identity = 81/143 (56.64%), Postives = 102/143 (71.33%), Query Frame = 0

Query: 8   SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDA 67
           + SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLL+E+HP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDA 89

Query: 68  VNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRY-----ASGGARPY 127
           VNSLAYEA+ R++DPVYGCVG ISILQ  + +LQ++L     +L +Y     AS    P 
Sbjct: 90  VNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 128 GRRAAAQSGVCFISPLNTNDRHD 146
           G +A A+    FI     N  H+
Sbjct: 150 GPQAMAE----FIGNAMPNGAHN 168

BLAST of CmoCh04G028170 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.3e-39
Identity = 72/112 (64.29%), Postives = 91/112 (81.25%), Query Frame = 0

Query: 8   SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQREDA 67
           + SPCAACKFLRRKC  DC+FAPYFPP+ P KF +VH++FGASNV+KLL+E+HP+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 68  VNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGA 120
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L     +L +Y    A
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAA 146

BLAST of CmoCh04G028170 vs. ExPASy TrEMBL
Match: A0A6J1E293 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430146 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.9e-84
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH
Sbjct: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 156
           PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
Sbjct: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 155

BLAST of CmoCh04G028170 vs. ExPASy TrEMBL
Match: A0A6J1JRR4 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111487747 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.2e-82
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH
Sbjct: 1   MASSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 156
           PYGRRAAAQSGVCFISPLN+NDRHDPYC DKEE+N
Sbjct: 121 PYGRRAAAQSGVCFISPLNSNDRHDPYCHDKEEEN 155

BLAST of CmoCh04G028170 vs. ExPASy TrEMBL
Match: A0A5A7T800 (LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00190 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.3e-67
Identity = 132/164 (80.49%), Postives = 142/164 (86.59%), Query Frame = 0

Query: 3   SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPH 62
           +SSS++NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PH
Sbjct: 2   ASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 61

Query: 63  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP- 122
           QREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQKELDATNADLVRYASG ARP 
Sbjct: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPP 121

Query: 123 --YGRRAAA--------QSGVCFISPLNTNDRHDPYCRDKEEQN 156
             YGRRA           SG+ F+SPL++N   DPYC +KEE N
Sbjct: 122 SQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHEKEEGN 165

BLAST of CmoCh04G028170 vs. ExPASy TrEMBL
Match: A0A1S3C8P8 (LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 131/164 (79.88%), Postives = 141/164 (85.98%), Query Frame = 0

Query: 3   SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPH 62
           +SSS++NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PH
Sbjct: 2   ASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 61

Query: 63  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP- 122
           QREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQKELDATNADLVRYASG ARP 
Sbjct: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPP 121

Query: 123 --YGRRAAA--------QSGVCFISPLNTNDRHDPYCRDKEEQN 156
             YGRRA           SG+ F+SPL++N   DPYC + EE N
Sbjct: 122 SQYGRRATTASVSSTRHHSGLSFLSPLSSNHHDDPYCHENEEGN 165

BLAST of CmoCh04G028170 vs. ExPASy TrEMBL
Match: A0A0A0KSE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 0

Query: 3   SSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPH 62
           +SSS++NSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLL+EV PH
Sbjct: 2   ASSSYTNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPH 61

Query: 63  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGARP- 122
           QREDAVNSLAYEAEARMKDPVYGCVGAIS+LQRQVIRLQKELDATNADLVRYASG ARP 
Sbjct: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGSARPP 121

Query: 123 --YGRRAAA-------QSGVCFISPLNTNDRHDPYCRDKEEQN 156
             YGRRA          SG+ F+SPL+++     YC DKEE N
Sbjct: 122 SQYGRRATTASVSTRHHSGLSFLSPLSSSHHDSTYCHDKEEGN 164

BLAST of CmoCh04G028170 vs. NCBI nr
Match: XP_022922097.1 (LOB domain-containing protein 25-like [Cucurbita moschata])

HSP 1 Score: 320.5 bits (820), Expect = 8.1e-84
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH
Sbjct: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 156
           PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
Sbjct: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 155

BLAST of CmoCh04G028170 vs. NCBI nr
Match: KAG7033097.1 (LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.3 bits (817), Expect = 1.8e-83
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH
Sbjct: 1   MASSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 156
           PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN
Sbjct: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 155

BLAST of CmoCh04G028170 vs. NCBI nr
Match: XP_023551247.1 (LOB domain-containing protein 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-82
Identity = 152/155 (98.06%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH
Sbjct: 1   MASSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 156
           PYGRRAAAQSGVCFISPLN+NDRHDPYCRDKEE+N
Sbjct: 121 PYGRRAAAQSGVCFISPLNSNDRHDPYCRDKEEEN 155

BLAST of CmoCh04G028170 vs. NCBI nr
Match: KAG6602419.1 (LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.2 bits (809), Expect = 1.5e-82
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH
Sbjct: 1   MASSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELD TNADLVRYASGGAR
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDTTNADLVRYASGGAR 120

Query: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 156
           PYGRRAAAQSGVCFISPLN+NDRHDPYCRDKEEQN
Sbjct: 121 PYGRRAAAQSGVCFISPLNSNDRHDPYCRDKEEQN 155

BLAST of CmoCh04G028170 vs. NCBI nr
Match: XP_022991035.1 (LOB domain-containing protein 25-like [Cucurbita maxima])

HSP 1 Score: 314.7 bits (805), Expect = 4.5e-82
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSSS+SNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH
Sbjct: 1   MASSSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR
Sbjct: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYASGGAR 120

Query: 121 PYGRRAAAQSGVCFISPLNTNDRHDPYCRDKEEQN 156
           PYGRRAAAQSGVCFISPLN+NDRHDPYC DKEE+N
Sbjct: 121 PYGRRAAAQSGVCFISPLNSNDRHDPYCHDKEEEN 155

BLAST of CmoCh04G028170 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 208.8 bits (530), Expect = 3.2e-54
Identity = 95/111 (85.59%), Postives = 108/111 (97.30%), Query Frame = 0

Query: 5   SSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVHPHQR 64
           S+++NSPCAACKFLRRKC +DC+FAPYFPPEEPTKFANVH+IFGASNVSK+LHEV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 65  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRYA 116
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV+RLQ+EL+ TNADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

BLAST of CmoCh04G028170 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.4e-51
Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRY 115
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

BLAST of CmoCh04G028170 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.4e-51
Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRY 115
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

BLAST of CmoCh04G028170 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.4e-51
Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRY 115
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

BLAST of CmoCh04G028170 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.4e-51
Identity = 96/114 (84.21%), Postives = 103/114 (90.35%), Query Frame = 0

Query: 1   MASSSSFSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLHEVH 60
           MASSS+  NSPCAACKFLRRKC+  CIFAPYFPPEEP KFANVHKIFGASNV+KLL+E+ 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIRLQKELDATNADLVRY 115
           PHQREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQKELDA NADL  Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L8Q34.5e-5385.59LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S... [more]
Q9FML41.0e-4984.21Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=... [more]
O044792.8e-4268.64Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1[more]
Q32SG37.5e-4056.64LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1[more]
A2WXT06.3e-3964.29LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P... [more]
Match NameE-valueIdentityDescription
A0A6J1E2933.9e-84100.00LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111430... [more]
A0A6J1JRR42.2e-8297.42LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148774... [more]
A0A5A7T8003.3e-6780.49LOB domain-containing protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3C8P81.3e-6679.88LOB domain-containing protein 25 OS=Cucumis melo OX=3656 GN=LOC103498101 PE=3 SV... [more]
A0A0A0KSE81.4e-6579.75LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G523080 PE=3 SV... [more]
Match NameE-valueIdentityDescription
XP_022922097.18.1e-84100.00LOB domain-containing protein 25-like [Cucurbita moschata][more]
KAG7033097.11.8e-8399.35LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. argyros... [more]
XP_023551247.11.2e-8298.06LOB domain-containing protein 25-like [Cucurbita pepo subsp. pepo][more]
KAG6602419.11.5e-8298.06LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_022991035.14.5e-8297.42LOB domain-containing protein 25-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G27650.13.2e-5485.59LOB domain-containing protein 25 [more]
AT5G63090.27.4e-5184.21Lateral organ boundaries (LOB) domain family protein [more]
AT5G63090.37.4e-5184.21Lateral organ boundaries (LOB) domain family protein [more]
AT5G63090.17.4e-5184.21Lateral organ boundaries (LOB) domain family protein [more]
AT5G63090.47.4e-5184.21Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
NoneNo IPR availablePANTHERPTHR31301:SF12LOB DOMAIN-CONTAINING PROTEIN 25coord: 4..118
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 4..118
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 11..107
e-value: 1.8E-41
score: 140.7
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 10..111
score: 27.370764

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G028170.1CmoCh04G028170.1mRNA