CmoCh04G027750 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G027750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	16 kDa phloem protein 1
Location	Cmo_Chr04: 20030569 .. 20031449 (+)
RNA-Seq Expression	CmoCh04G027750
Synteny	CmoCh04G027750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGATAAAATTTTAAATCTAAATTAAAAAGTTAGTAGAAGGCAGGCAGACACCTTTGTCGTGGAGCTGCGTGTGCGACAGTAGCAGCAGCAGCAGTGGCGGGTCATCTATATAAACGCACTGCACCTTTGTATTCCTTCAACTTCATCTTCAAGCTTGACAGACAGAGGCAAAGCAATGGGGATGGGAATGTTGGAGGTCCATTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAGTAAGCTCCAATCTGCGGTTCCTACTTGCTTTGATGCTCTGCCTATGCTCTTACTTACTTCTTAACCTATTCCATTTTCTCCCCATTTCGCAGAACCAATTGACCCTTATGCTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAGTTAGTCTCTCCTTTTTCTTTCCGACCTCTAAAATTTTATAAATTAATATCATTCTTATTCGTGTGGTTTTAAATGGCGCAGATGCAGGACCAGATCCATTATGGGATGAGAAATTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCATATCTTCTTCAAGGTCATGGACCATGACGCTATAGATGATGATGATTTGATTGGCGAAGTCAAGTAAGACCATTGTGATTTTCTCAAACATAACTACTACTATTATTACTATCACCACCACATTCAAAGTTTACGAAAGATGGAACTAAATGACTGTTGTAGAATAGATATCAAGGATTTATTAGCGGAAGGAGTTAGAAAAGGATGGTCGAAGATACCGCCTAGAATGTACCAGGTTTTATTACTCAATCTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCCAGCGGCAGGTAATGGAGCATGTTTAG

mRNA sequence

ATTAGATAAAATTTTAAATCTAAATTAAAAAGTTAGTAGAAGGCAGGCAGACACCTTTGTCGTGGAGCTGCGTGTGCGACAGTAGCAGCAGCAGCAGTGGCGGGTCATCTATATAAACGCACTGCACCTTTGTATTCCTTCAACTTCATCTTCAAGCTTGACAGACAGAGGCAAAGCAATGGGGATGGGAATGTTGGAGGTCCATTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAAACCAATTGACCCTTATGCTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAATGCAGGACCAGATCCATTATGGGATGAGAAATTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCATATCTTCTTCAAGGTCATGGACCATGACGCTATAGATGATGATGATTTGATTGGCGAAGTCAAAATAGATATCAAGGATTTATTAGCGGAAGGAGTTAGAAAAGGATGGTCGAAGATACCGCCTAGAATGTACCAGGTTTTATTACTCAATCTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCCAGCGGCAGGTAATGGAGCATGTTTAG

Coding sequence (CDS)

ATGGGGATGGGAATGTTGGAGGTCCATTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAAACCAATTGACCCTTATGCTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAATGCAGGACCAGATCCATTATGGGATGAGAAATTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCATATCTTCTTCAAGGTCATGGACCATGACGCTATAGATGATGATGATTTGATTGGCGAAGTCAAAATAGATATCAAGGATTTATTAGCGGAAGGAGTTAGAAAAGGATGGTCGAAGATACCGCCTAGAATGTACCAGGTTTTATTACTCAATCTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCCAGCGGCAGGTAATGGAGCATGTTTAG

Protein sequence

MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFLAEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLLNLYFKGEIEVGVSFQRQVMEHV

Homology

[Close]

BLAST of CmoCh04G027750 vs. ExPASy Swiss-Prot
Match: Q9ZT46 (16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16-2 PE=1 SV=3)

HSP 1 Score: 256.5 bits (654), Expect = 1.7e-67
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. ExPASy Swiss-Prot
Match: Q9ZT47 (16 kDa phloem protein 1 OS=Cucurbita maxima OX=3661 GN=PP16-1 PE=1 SV=3)

HSP 1 Score: 248.8 bits (634), Expect = 3.6e-65
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGP+PLWDEKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPNPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHI FKVMDHDAID DD IG+VKID+K+LLAEGVRKG S++PPRMY VL  
Sbjct: 61  AEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVKNLLAEGVRKGKSEMPPRMYHVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            ++FKGEIEVGVSF+ Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

[Close]

BLAST of CmoCh04G027750 vs. ExPASy Swiss-Prot
Match: Q9M2T2 (16 kDa phloem protein 1 OS=Arabidopsis thaliana OX=3702 GN=PP16-1 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.9e-32
Identity = 69/135 (51.11%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAK-NAGPDPLWDEKFKF 60
           M +G+LEV LISGKGL+  D L K IDPY EI YKGQ R S VAK + G +P W++K K+
Sbjct: 1   MAVGILEVSLISGKGLKRSDFLGK-IDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKW 60

Query: 61  LAEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLL 120
            AE+PGSG D+ +  KVMDHD    DD IGE  + +K+LL  GV KG +++ P  Y ++ 
Sbjct: 61  RAEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVD 120

Query: 121 LNLYFKGEIEVGVSF 135
            +L F GE+ +GVS+
Sbjct: 121 SDLSFVGELLIGVSY 134

[Close]

BLAST of CmoCh04G027750 vs. ExPASy Swiss-Prot
Match: A2WWV5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-23
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 2   GMGMLEVHLISGKGLQAHDPLNK--PIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKF 61
           G G+LEVHL+  KGL  +D L +   IDPY  + Y+ QER S VA++ G +P W+E FKF
Sbjct: 3   GSGVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKF 62

Query: 62  LAEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLL 121
                 + G   +F ++MDHD    DD +GE  I++ DL++ G+  G  ++    ++V+L
Sbjct: 63  QINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVL 122

Query: 122 LNLYFKGEIEVGVSF 135
            +  + GEI V ++F
Sbjct: 123 ADKTYHGEIRVSLTF 137

[Close]

BLAST of CmoCh04G027750 vs. ExPASy Swiss-Prot
Match: Q0JHU5 (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-23
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 2   GMGMLEVHLISGKGLQAHDPLNK--PIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKF 61
           G G+LEVHL+  KGL  +D L +   IDPY  + Y+ QER S VA++ G +P W+E FKF
Sbjct: 3   GSGVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKF 62

Query: 62  LAEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLL 121
                 + G   +F ++MDHD    DD +GE  I++ DL++ G+  G  ++    ++V+L
Sbjct: 63  QINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVL 122

Query: 122 LNLYFKGEIEVGVSF 135
            +  + GEI V ++F
Sbjct: 123 ADKTYHGEIRVSLTF 137

[Close]

BLAST of CmoCh04G027750 vs. ExPASy TrEMBL
Match: A0A6J1E4J3 (16 kDa phloem protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429857 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.3e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL
Sbjct: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120

Query: 121 NLYFKGEIEVGVSFQRQVMEHV 143
           NLYFKGEIEVGVSFQRQVMEHV
Sbjct: 121 NLYFKGEIEVGVSFQRQVMEHV 142

[Close]

BLAST of CmoCh04G027750 vs. ExPASy TrEMBL
Match: Q4JHJ2 (16 kDa phloem protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=PP16 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.4e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL
Sbjct: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
           NLYFKGEIEVGVSFQRQ
Sbjct: 121 NLYFKGEIEVGVSFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. ExPASy TrEMBL
Match: Q4JHI9 (16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. ExPASy TrEMBL
Match: Q4JHI5 (16 kDa. phloem protein 2 OS=Cucurbita maxima x Cucurbita moschata OX=334420 GN=PP16 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. ExPASy TrEMBL
Match: A0MZ37 (16 kDa phloem protein 2 OS=Cucurbita moschata OX=3662 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: XP_022921678.1 (16 kDa phloem protein 2-like isoform X1 [Cucurbita moschata] >KAG6602382.1 16 kDa phloem protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.0 bits (759), Expect = 8.8e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL
Sbjct: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120

Query: 121 NLYFKGEIEVGVSFQRQVMEHV 143
           NLYFKGEIEVGVSFQRQVMEHV
Sbjct: 121 NLYFKGEIEVGVSFQRQVMEHV 142

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: XP_022921688.1 (16 kDa phloem protein 2-like isoform X2 [Cucurbita moschata] >AAY96407.1 16 kDa. phloem protein 2 [Cucurbita moschata])

HSP 1 Score: 287.3 bits (734), Expect = 7.0e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL
Sbjct: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
           NLYFKGEIEVGVSFQRQ
Sbjct: 121 NLYFKGEIEVGVSFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: XP_022990990.1 (16 kDa phloem protein 2 [Cucurbita maxima] >Q9ZT46.3 RecName: Full=16 kDa phloem protein 2 [Cucurbita maxima] >AAY96414.1 16 kDa. phloem protein 2 [Cucurbita maxima x Cucurbita moschata] >ABK41007.1 16 kDa phloem protein 2 [Cucurbita moschata] >AAD05497.1 phloem protein [Cucurbita maxima] >AAY96410.1 16 kDa. phloem protein 2 [Cucurbita maxima] >ACA02978.1 16kDa phloem protein 2 [Cucurbita maxima x Cucurbita moschata])

HSP 1 Score: 256.5 bits (654), Expect = 1.3e-64
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: AAY96406.1 (16 kDa. phloem protein 1 [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 8.6e-64
Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M MGMLEVHLISGKGLQAHDPLNKPIDPY EINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFH+ FKVMDHDAID DD IG+VKID+KDLLAEGVRKGWS+I PRMY VL  
Sbjct: 61  AEYPGSGGDFHVLFKVMDHDAIDGDDYIGDVKIDVKDLLAEGVRKGWSEIRPRMYHVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            ++FKGEIEVGVSF+ Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: XP_022921664.1 (16 kDa phloem protein 1 [Cucurbita moschata] >AAY96413.1 16 kDa. phloem protein 1 [Cucurbita maxima x Cucurbita moschata] >KAG6602383.1 16 kDa phloem protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 252.7 bits (644), Expect = 1.9e-63
Identity = 119/137 (86.86%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M MGMLEVHLISGKGLQAHDPLNKPIDPY EINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHI FKVMDHD ID DD IG+VKID+KDLLAEGVRKGWS+I PRMY VL  
Sbjct: 61  AEYPGSGGDFHILFKVMDHDVIDGDDYIGDVKIDVKDLLAEGVRKGWSEIRPRMYHVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            ++FKGEIEVGVSF+ Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

[Close]

BLAST of CmoCh04G027750 vs. TAIR 10
Match: AT3G55470.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-34
Identity = 69/134 (51.49%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M +G+LEV LISGKGL+  D L K IDPY EI YKGQ R S VAK+ G +P W++K K+ 
Sbjct: 1   MAVGILEVSLISGKGLKRSDFLGK-IDPYVEIQYKGQTRKSSVAKDGGRNPTWNDKLKWR 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AE+PGSG D+ +  KVMDHD    DD IGE  + +K+LL  GV KG +++ P  Y ++  
Sbjct: 61  AEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVDS 120

Query: 121 NLYFKGEIEVGVSF 135
           +L F GE+ +GVS+
Sbjct: 121 DLSFVGELLIGVSY 133

[Close]

BLAST of CmoCh04G027750 vs. TAIR 10
Match: AT3G55470.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 138.3 bits (347), Expect = 4.9e-33
Identity = 69/135 (51.11%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAK-NAGPDPLWDEKFKF 60
           M +G+LEV LISGKGL+  D L K IDPY EI YKGQ R S VAK + G +P W++K K+
Sbjct: 1   MAVGILEVSLISGKGLKRSDFLGK-IDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKW 60

Query: 61  LAEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLL 120
            AE+PGSG D+ +  KVMDHD    DD IGE  + +K+LL  GV KG +++ P  Y ++ 
Sbjct: 61  RAEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVD 120

Query: 121 LNLYFKGEIEVGVSF 135
            +L F GE+ +GVS+
Sbjct: 121 SDLSFVGELLIGVSY 134

[Close]

BLAST of CmoCh04G027750 vs. TAIR 10
Match: AT1G63220.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 77.8 bits (190), Expect = 7.8e-15
Identity = 51/135 (37.78%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M  G LEV L+S KGL+  D LN  +DPY ++  + Q++ S VA+  G  P W+E F F 
Sbjct: 1   MPHGTLEVVLVSAKGLEDADFLNN-MDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFT 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
                S G   +  K+ D D   +DD +GE  I ++ +  EG       IPP  Y V+  
Sbjct: 61  V----SEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEG------SIPPTAYNVVKD 120

Query: 121 NLYFKGEIEVGVSFQ 136
             Y KGEI V +SF+
Sbjct: 121 EEY-KGEIWVALSFK 123

[Close]

BLAST of CmoCh04G027750 vs. TAIR 10
Match: AT4G00467.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 67.8 bits (164), Expect = 8.1e-12
Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 0


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M  G+LEV LI   G+   + +  P+  Y  +    +E  SK++K    + LW++KF F 
Sbjct: 1   MKRGILEVFLIDAHGITHTNFIGTPV-YYVLLQCGTKEYRSKMSKGDNDNALWNQKFVF- 60

Query: 61  AEYPGSGGD--FHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVL 120
            ++P S      +I  +++D +  +D   +GE  I +  ++ EG  +G+ +I P  Y V+
Sbjct: 61  -DFPMSQWKKLTYIKLRILDKELFNDGGFVGETIIHLGGIITEGRDRGYIEIKPAPYNVV 120

Query: 121 LLNLYFKGEIEVGVSF 135
           L +  FKGE++VG+ F
Sbjct: 121 LEDDTFKGELKVGLRF 133

[Close]

BLAST of CmoCh04G027750 vs. TAIR 10
Match: AT4G05330.1 (ARF-GAP domain 13 )

HSP 1 Score: 51.2 bits (121), Expect = 7.9e-07
Identity = 32/123 (26.02%), Postives = 62/123 (50.41%), Query Frame = 0


Query: 3   MGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFLAE 62
           +G+L+V +  G  L   D ++   DPY  +N  G++++     N+  +P+W++  + +  
Sbjct: 179 IGLLKVTIKKGTNLAIRDMMSS--DPYVVLNL-GKQKLQTTVMNSNLNPVWNQ--ELMLS 238

Query: 63  YPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLLNL 122
            P S G   +  +V D+D    DD++GE  IDI+ L+   +  G     P M+  + +  
Sbjct: 239 VPESYGP--VKLQVYDYDTFSADDIMGEADIDIQPLITSAMAFG----DPEMFGDMQIGK 290

Query: 123 YFK 126
           + K
Sbjct: 299 WLK 290

The following BLAST results are available for this feature:

BLAST of CmoCh04G027750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT46	1.7e-67	86.13	16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16-2 PE=1 SV=3	[more]
Q9ZT47	3.6e-65	85.40	16 kDa phloem protein 1 OS=Cucurbita maxima OX=3661 GN=PP16-1 PE=1 SV=3	[more]
Q9M2T2	6.9e-32	51.11	16 kDa phloem protein 1 OS=Arabidopsis thaliana OX=3702 GN=PP16-1 PE=1 SV=1	[more]
A2WWV5	4.5e-23	38.52	Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=...	[more]
Q0JHU5	4.5e-23	38.52	Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 P...	[more]

BLAST of CmoCh04G027750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4J3	4.3e-77	100.00	16 kDa phloem protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
Q4JHJ2	3.4e-74	100.00	16 kDa phloem protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=PP16 PE...	[more]
Q4JHI9	6.4e-65	86.13	16 kDa phloem protein 2 OS=Cucurbita maxima OX=3661 GN=PP16 PE=2 SV=1	[more]
Q4JHI5	6.4e-65	86.13	16 kDa. phloem protein 2 OS=Cucurbita maxima x Cucurbita moschata OX=334420 GN=P...	[more]
A0MZ37	6.4e-65	86.13	16 kDa phloem protein 2 OS=Cucurbita moschata OX=3662 PE=2 SV=1	[more]

BLAST of CmoCh04G027750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921678.1	8.8e-77	100.00	16 kDa phloem protein 2-like isoform X1 [Cucurbita moschata] >KAG6602382.1 16 kD...	[more]
XP_022921688.1	7.0e-74	100.00	16 kDa phloem protein 2-like isoform X2 [Cucurbita moschata] >AAY96407.1 16 kDa....	[more]
XP_022990990.1	1.3e-64	86.13	16 kDa phloem protein 2 [Cucurbita maxima] >Q9ZT46.3 RecName: Full=16 kDa phloem...	[more]
AAY96406.1	8.6e-64	86.86	16 kDa. phloem protein 1 [Cucurbita moschata]	[more]
XP_022921664.1	1.9e-63	86.86	16 kDa phloem protein 1 [Cucurbita moschata] >AAY96413.1 16 kDa. phloem protein ...	[more]

BLAST of CmoCh04G027750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55470.2	2.0e-34	51.49	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G55470.1	4.9e-33	51.11	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G63220.1	7.8e-15	37.78	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G00467.1	8.1e-12	30.88	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G05330.1	7.9e-07	26.02	ARF-GAP domain 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 5..107 e-value: 7.2E-15 score: 65.4
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 4..109 e-value: 9.4E-17 score: 61.2
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..108 score: 18.673868
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 2..136 e-value: 1.1E-22 score: 82.7
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 2..125
None	No IPR available	PANTHER	PTHR46502	C2 DOMAIN-CONTAINING	coord: 1..139
None	No IPR available	PANTHER	PTHR46502:SF15	ELICITOR-RESPONSIVE PROTEIN 1	coord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027750.1	CmoCh04G027750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding