CmoCh04G026640 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G026640
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ras-related protein RABC2a-like
Location	Cmo_Chr04: 19381066 .. 19384825 (+)
RNA-Seq Expression	CmoCh04G026640
Synteny	CmoCh04G026640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGACACAGCTCTCTTGCTTCTAAATTTGTCCCTTCTTCTTTATCCTTACTTCATTTCTTTATTTCAACCAAAACCCAGTCAAAATCCAACATGAACAACAACAAAAACCCAAATATTTCATCTAAAAAAACACCCATTTCTTGATTCAATCTCTCTTTCAATAATCCATTCAAATTTCAAACACCCTGTTCTTCATATAAACGTTTGAATCAAATAAAAACCCTCAAAAGCTTGAAAAATTGTGGACAAATTGGAAGAATTTTGAGATGAAATGAGACAAATAATGTTGCAGGCCATAGAATCTACAAAAAGCGGACTCAGCCCATTGAAGGTAAAGGGCAAGTTTGTCCAAACGCTATAATTTACACACGTACACTACCGGCTACTGCCAGCTCCTTCTCTCTGTTACGTTTCCGTTTCTCATAACCTCACCAATTCCATTTCCTTCTTTTGATGCTTTTGATTTCTTTCTGTTCTTCTTGTTTATGGAAAAGGGTTTTTGTGAGAGAGAGTTGAATAGATAGAAAAGAGAAATGATGGGTTCTTCTTCAAAAGCAAGAAGCAGTAGCTATGATTACTCGTTCAAGATACTGTTGATTGGGGATTCTGGCGTTGGGAAAAGCAGTATTCTCCTCAGTTACATATCCAATTTTGTTCAAGATCTGTCTCCCACAATCGGTTTGTTCTATGTCTTTCTCATTATCTCTATGCATGTTCTTGTGGATATCATGAAATTGCTACAACCCAGATGCTCTGTTCTGAGTTTTGGTCTTATTTGAATCATCTAAGAAATCTTGTTGGTTCTGCTAGTTGGATGAACACATATTGGTTGAATATTTTTGTTTTTTTTGTTGGTTCTTCTTTGTTCTTAGTCAGCTGATCGTAGTTTTTTGATTGATTTCTGGCGTCTGGAATGTTTTTTTTGTCGTAGTGTGTAACCGTCCAAGCCCACTAGCTAGCACATATTGTCTACTTTGGCCCGTTAGGTATTGTCGTCAGCCTCACGGCTTTAAAACGCGTCTACTGAGGTTTTCACACCCTTGTAAGGAATGTTTCGTTCCTCTCGGTTGGAGGGATCTCACATAGTGAGAGCTACTGGCTTTGAATCAATTTTGTCGCGGAGTAGATTTAGTTTCAAATCATGATTAGTTTAGAACTTTGGAAAGCCACACATACACACATATAGAGTTCAACCGGTGGGATTCGGACCTCTGATTTGTTGGTCGAGGACATATGCTTCACCTAATTGAGCTGTGTGTGTGTGTGTGTGTGTAGAGAGAGAGTTCAACAAGTCGGGATTCGAACTTCTGAATTGTTGGGAGAGGACATATGCTTCACCTAATTGAGCTATGTGTGTCTGTATATATATAGAGAGAGAGTTCAACAAGTCGAGATTCGAACCTCTGAATTGTTGGTCGAGTACATTGCTTCACCTAATTGAGCTATGTGTGTCTATGTGTGTGTATATATATATATATAGAGAGAGAGAGAGAGAGAGTTCAACAAGTCGGGATTCGAACCTCTGAATTGTTGGTCGAGTACATTGCTTCACCTAATGGAGCTGTGTGTGTGTGTGTATATATAGAGAGAGAGTTCAACAAGTCGGGATTTGAACCTCTGAATTGTTGGGAGAGGACATGCTTCACCTAATTGAGCTATATGTGTGTGTGTGTGTGTGTGTATATAGAGAGAGAGTTCAACAAGTCGGGATTCGAACCTATGAAGGGTTGGTCGTGGTCATAGGCCTCAACTAGTTGGGCTATGCTTCCATTAACACTTAGAGAGCCATATTATTCTTTAAAACGAGTCGATTGTACATGGTGATGTAAGTGCTCATAAGGTTCTCATTGTTAAGGAGTTTGTAGTAGGTTGAAAAGAGGTGTGTGTGGCCAGGCTCGTTATAGTATTGGGTCGGGAATCTTTGCTCTTCTCTTTTGCATTTCTGCTGTCTGCGTTCTTTTTTGTGTCTGTCTGTACCACAAAAATGGTCGACGCCAGCTCTAATGGTTGAAAATAGAGGGCCAACTAAGACCCTGTAATAAAGCTTCGATAAAACAAACGATTCGTTCCCACGACTTCAGACCAGAAAGAAACGAAGTTTTTTGAAACATCGTAATGATACATTTTGTCGTTTATATGAATAAATTATTCTAATTCCATTAACTTCTCATTCCGCTCGATTGATTTTCTTTTCATGCATGGCTGCAGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACGATTTGGGACACAGGTAACTGGATGATTTACCTGTTCTTCTGGTCTCGTGTTTACGTTTTTAGCTTGTCCCAGCTGCTCGATACAGAAAGTTTCTTCGTTTTTCTGCTTCGAAGCTATATGCTTACTCTATGAAGTGTTCGTTCACCCATTTAATATACAATTTCTTATCCTTTGTTCTTGTATGCAGCTGGACAGGAGAGGTTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGGTATGACCGAAATTTATCCGTTAAAAAACTCTTTGAAATGATTATTTAAAAAAAAAAAAGCGGGAAAATTCCCCTCGGGAACCTCCTTGCCCCGATTCCCACACAAATAAATAGGGAGTTTCGTGGGGATGGGGTTGAAATAGTAGGTGGCGACGCGTCGGTTTTATACGTTTTATTTTGGAAACATTCCCTCATGGCATGTTCCGTTGTCACGGTTGAATGTATTGAATTCAGTTTGAGCACTTCACGAGGCTGATACTTATCTATGTTTTGCGGATAGTGTACGATGTTACCCGACGGGAGACGTTTACGAACTTGATGGACGTATGGGCGAAGGAAGTAGAGATGTATTTAACCAATCATGAGTGCATAAAAATTCTAGTCGGGAATAAAGTCGATCGAGTAAGTTGTATGATCCTACCGTCGTTCAAATCTCAAACTCTTCATTTTAAGGAATCTTTAATGTTGACAGGGTAGCGAAAGAGCTGTTTCGACAGAAGAAGGTATGGCCGTTGCCAAGGAGCATCAAAGTTTGTTTCTCGAGTGCAGTGCTAGAACTCGAGAAAATGTCGATAGATGCTTTAAAGAACTCTCTTCGAAGGTAACGCTCCGACACTAAGATGCTCATGTTTTACTTGAATCGACTTCCGAACTTAGTTGCTAAGAATGCCACAGCACATAGGACACTTCCATGTACACAAGTATTAGTTTAGGAGCTATAATGCAACGGTTTGCGTACTTACTCGAGCTCGTGATATCTTTTTCATTTCTGTTCTGTGGGGTTGCTATGAAGCTCAAAACCCGATCCCCGATGTCAAATGTATTTCATCTCATGATCTAAATCGGTTTATTACAATCCAGATACTGGAAGTTCCGAGTCTACTAGAAAATGGATCTGTTGTGGTGAAACAGAAAATTTTGGACAAAACCCGAGCACGAAAAGAAGCGAACGATGGGGGTTGTTGCCGCTAACCCGACGCAACGAAACAGATATGGAGGGAAGATCACGAAATTGTTGATAAGAACAGAGGCCAGGAAAGACACAAATGAGGCAACCAAGGTGATTACATTGTTTCTATCAGCTTTTTTCTTTCAAAAGAGAGTAAAAAAAAAAAAAAATGCATTGGAATGGTGTCTTTGAGATCACTGTAAAAGTTTTGGGTGAATTTTGTTGGGATAATAATGACTTTTGAGTAACAAAATTTAATAAAATCCTTGTAGATAATGTGAATCTATTTTTG

mRNA sequence

CATGACACAGCTCTCTTGCTTCTAAATTTGTCCCTTCTTCTTTATCCTTACTTCATTTCTTTATTTCAACCAAAACCCAGTCAAAATCCAACATGAACAACAACAAAAACCCAAATATTTCATCTAAAAAAACACCCATTTCTTGATTCAATCTCTCTTTCAATAATCCATTCAAATTTCAAACACCCTGTTCTTCATATAAACGTTTGAATCAAATAAAAACCCTCAAAAGCTTGAAAAATTGTGGACAAATTGGAAGAATTTTGAGATGAAATGAGACAAATAATGTTGCAGGCCATAGAATCTACAAAAAGCGGACTCAGCCCATTGAAGGGTTTTTGTGAGAGAGAGTTGAATAGATAGAAAAGAGAAATGATGGGTTCTTCTTCAAAAGCAAGAAGCAGTAGCTATGATTACTCGTTCAAGATACTGTTGATTGGGGATTCTGGCGTTGGGAAAAGCAGTATTCTCCTCAGTTACATATCCAATTTTGTTCAAGATCTGTCTCCCACAATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACGATTTGGGACACAGCTGGACAGGAGAGGTTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGTGTACGATGTTACCCGACGGGAGACGTTTACGAACTTGATGGACGTATGGGCGAAGGAAGTAGAGATGTATTTAACCAATCATGAGTGCATAAAAATTCTAGTCGGGAATAAAGTCGATCGAGGTAGCGAAAGAGCTGTTTCGACAGAAGAAGGTATGGCCGTTGCCAAGGAGCATCAAAGTTTGTTTCTCGAGTGCAGTGCTAGAACTCGAGAAAATGTCGATAGATGCTTTAAAGAACTCTCTTCGAAGATACTGGAAGTTCCGAGTCTACTAGAAAATGGATCTGTTGTGGTGAAACAGAAAATTTTGGACAAAACCCGAGCACGAAAAGAAGCGAACGATGGGGGTTGTTGCCGCTAACCCGACGCAACGAAACAGATATGGAGGGAAGATCACGAAATTGTTGATAAGAACAGAGGCCAGGAAAGACACAAATGAGGCAACCAAGGTGATTACATTGTTTCTATCAGCTTTTTTCTTTCAAAAGAGAGTAAAAAAAAAAAAAAATGCATTGGAATGGTGTCTTTGAGATCACTGTAAAAGTTTTGGGTGAATTTTGTTGGGATAATAATGACTTTTGAGTAACAAAATTTAATAAAATCCTTGTAGATAATGTGAATCTATTTTTG

Coding sequence (CDS)

ATGATGGGTTCTTCTTCAAAAGCAAGAAGCAGTAGCTATGATTACTCGTTCAAGATACTGTTGATTGGGGATTCTGGCGTTGGGAAAAGCAGTATTCTCCTCAGTTACATATCCAATTTTGTTCAAGATCTGTCTCCCACAATCGGTGTGGATTTCAAGATCAAGATGGTAACAGTTGGTGGAAAAAGATTGAAGCTAACGATTTGGGACACAGCTGGACAGGAGAGGTTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGTGTACGATGTTACCCGACGGGAGACGTTTACGAACTTGATGGACGTATGGGCGAAGGAAGTAGAGATGTATTTAACCAATCATGAGTGCATAAAAATTCTAGTCGGGAATAAAGTCGATCGAGGTAGCGAAAGAGCTGTTTCGACAGAAGAAGGTATGGCCGTTGCCAAGGAGCATCAAAGTTTGTTTCTCGAGTGCAGTGCTAGAACTCGAGAAAATGTCGATAGATGCTTTAAAGAACTCTCTTCGAAGATACTGGAAGTTCCGAGTCTACTAGAAAATGGATCTGTTGTGGTGAAACAGAAAATTTTGGACAAAACCCGAGCACGAAAAGAAGCGAACGATGGGGGTTGTTGCCGCTAA

Protein sequence

MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVVVKQKILDKTRARKEANDGGCCR

Homology

[Close]

BLAST of CmoCh04G026640 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.2e-81
Identity = 152/211 (72.04%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+L+S+IS+ V+DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS--GQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL+DVW KE+E+Y TN 
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           EC+++LVGNKVDR SER VS EEG+A+AKE   +FLECSARTR+NV++CF+EL+ KI+EV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           PSLLE GS  VK+ IL +    +     GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of CmoCh04G026640 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.0e-76
Identity = 149/211 (70.62%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+LLS+IS+ V+DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS--GQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL D+WAKE+E+Y TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVDR SER VS EEGMA+AK+   LF ECSARTRENV+ CF+EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           PSLLE GS  VK+K          A+ G CC
Sbjct: 181 PSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of CmoCh04G026640 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.6e-71
Identity = 135/211 (63.98%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSS--GQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           K+LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL D+WAKE+++Y TN 
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVD+ SERAVS +EG+  A+E+  LFLECSA+TR NV++CF+EL  KILE 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           PSL   GS   K+ I  +  A+  +     C
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of CmoCh04G026640 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50
Identity = 104/180 (57.78%), Postives = 129/180 (71.67%), Query Frame = 0


Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISN-FVQDLSPTIGVDFKIKMVTVGGKRLKLTIWD 71
           S+DY+FK+LL+GDSGVGKS IL  + S  F +  + TIGVDFK+K +T  GKR KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 72  TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGN 131
           TAGQERF TLTSSYYRGA GII VYDVTRR+TF +L   W +E ++Y T    IK++V N
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVAN 124

Query: 132 KVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSV 191
           KVD  ++R VS+EEG   A+ H  LF+E SAR    V + F+EL  KIL+ P LLE  +V
Sbjct: 125 KVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAV 184

[Close]

BLAST of CmoCh04G026640 vs. ExPASy Swiss-Prot
Match: Q5ZLG1 (Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47
Identity = 101/198 (51.01%), Postives = 136/198 (68.69%), Query Frame = 0


Query: 16  SFKILLIGDSGVGKSSILLSYISN-FVQDLSPTIGVDFKIKMVTVGGKRLKLTIWDTAGQ 75
           + KIL+IG+SGVGKSS+LL +  + F  +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67

Query: 76  ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNHECIKILVGNKVDR 135
           ERF TLT SYYRGA G+ILVYDVTRR+TF  L D W  E+E Y T ++ +K+LVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDK 127

Query: 136 GSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEVPSLLENGSVVVKQ 195
              R V   EG+  A++H  LF+E SA+T + V   F+EL  KI++ P L E+ S     
Sbjct: 128 -ENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGV 187

Query: 196 KILDKTRARKEANDGGCC 213
           K+ +K    +E + GG C
Sbjct: 188 KLSNK----EEGHGGGAC 199

[Close]

BLAST of CmoCh04G026640 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.8e-114
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
           HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCCR 214
           VPSLLENGSVVVKQKILDKTRARKEANDGGCCR
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCCR 213

[Close]

BLAST of CmoCh04G026640 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112
Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLM VWAKEVEMYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
           HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCCR 214
           VPSLLENGSVVVKQKILDKTRA KEANDGGCCR
Sbjct: 181 VPSLLENGSVVVKQKILDKTRALKEANDGGCCR 213

[Close]

BLAST of CmoCh04G026640 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            ECIKILVGNKVDRGSERAV+TEEGM +AKEH+SLFLECSARTRENVDRCF+ELSSKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 213
           VPSLLENGS+VVKQKILDKTRA K  E ND GCC
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 214

[Close]

BLAST of CmoCh04G026640 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102
Identity = 193/214 (90.19%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 213
           VPSLLENGSVVVKQKILDKT+ARK  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 214

[Close]

BLAST of CmoCh04G026640 vs. ExPASy TrEMBL
Match: A0A6J1BW00 (ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.9e-101
Identity = 187/212 (88.21%), Postives = 199/212 (93.87%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
           HECIKILVGNKVDRGSER VSTEEGMAVA EH+S+FLECSA+TRENVDRCF++L  KIL+
Sbjct: 121 HECIKILVGNKVDRGSERVVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180

Query: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           VPSLLENGSV +KQ+ILDKTRARK A DGGCC
Sbjct: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCC 212

[Close]

BLAST of CmoCh04G026640 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420.6 bits (1080), Expect = 7.9e-114
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
           HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCCR 214
           VPSLLENGSVVVKQKILDKTRARKEANDGGCCR
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCCR 213

[Close]

BLAST of CmoCh04G026640 vs. NCBI nr
Match: XP_022990456.1 (ras-related protein RABC2a-like [Cucurbita maxima])

HSP 1 Score: 415.2 bits (1066), Expect = 3.3e-112
Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLM VWAKEVEMYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
           HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCCR 214
           VPSLLENGSVVVKQKILDKTRA KEANDGGCCR
Sbjct: 181 VPSLLENGSVVVKQKILDKTRALKEANDGGCCR 213

[Close]

BLAST of CmoCh04G026640 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 202/212 (95.28%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            ECIKILVGNKVDRGSERAV+TEEGM VAKEH+SLFLECSARTRENVDRCF+ELSSKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           VPSLLENGSVVVKQKILD TRARKEAND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDNTRARKEANDRGCC 212

[Close]

BLAST of CmoCh04G026640 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 385.2 bits (988), Expect = 3.7e-103
Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            ECIKILVGNKVDRGSERAV+TEEGM +AKEH+SLFLECSARTRENVDRCF+ELSSKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 213
           VPSLLENGS+VVKQKILDKTRA K  E ND GCC
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCC 214

[Close]

BLAST of CmoCh04G026640 vs. NCBI nr
Match: XP_004150373.1 (ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_006823 [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 3.1e-102
Identity = 193/214 (90.19%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL++VWAKEVE+YLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180
            ECIKILVGNKVDRGS+RAV+TEEGM VAK+H+SLFLECSARTRENVDRCFKELSSK++E
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVVVKQKILDKTRARK--EANDGGCC 213
           VPSLLENGSVVVKQKILDKT+ARK  E ND GCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 214

[Close]

BLAST of CmoCh04G026640 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-82
Identity = 152/211 (72.04%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+L+S+IS+ V+DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS--GQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL+DVW KE+E+Y TN 
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           EC+++LVGNKVDR SER VS EEG+A+AKE   +FLECSARTR+NV++CF+EL+ KI+EV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           PSLLE GS  VK+ IL +    +     GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of CmoCh04G026640 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 285.8 bits (730), Expect = 2.8e-77
Identity = 149/211 (70.62%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+LLS+IS+ V+DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS--GQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL D+WAKE+E+Y TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVDR SER VS EEGMA+AK+   LF ECSARTRENV+ CF+EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           PSLLE GS  VK+K          A+ G CC
Sbjct: 181 PSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of CmoCh04G026640 vs. TAIR 10
Match: AT3G09910.2 (RAB GTPase homolog C2B )

HSP 1 Score: 285.8 bits (730), Expect = 2.8e-77
Identity = 149/211 (70.62%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+LLS+IS+ V+DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS--GQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL D+WAKE+E+Y TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVDR SER VS EEGMA+AK+   LF ECSARTRENV+ CF+EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           PSLLE GS  VK+K          A+ G CC
Sbjct: 181 PSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of CmoCh04G026640 vs. TAIR 10
Match: AT3G09910.3 (RAB GTPase homolog C2B )

HSP 1 Score: 285.8 bits (730), Expect = 2.8e-77
Identity = 149/211 (70.62%), Postives = 172/211 (81.52%), Query Frame = 0


Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS    S YD SFKILLIGDSGVGKSS+LLS+IS+ V+DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS--GQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL D+WAKE+E+Y TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVDR SER VS EEGMA+AK+   LF ECSARTRENV+ CF+EL+ KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           PSLLE GS  VK+K          A+ G CC
Sbjct: 181 PSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of CmoCh04G026640 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 268.5 bits (685), Expect = 4.7e-72
Identity = 135/211 (63.98%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 2   MGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSS--GQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTNH 121
           K+LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL D+WAKE+++Y TN 
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILEV 181
           +CIK+LVGNKVD+ SERAVS +EG+  A+E+  LFLECSA+TR NV++CF+EL  KILE 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVVVKQKILDKTRARKEANDGGCC 213
           PSL   GS   K+ I  +  A+  +     C
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

The following BLAST results are available for this feature:

BLAST of CmoCh04G026640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	3.2e-81	72.04	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	4.0e-76	70.62	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	6.6e-71	63.98	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
P36862	2.2e-50	57.78	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q5ZLG1	1.3e-47	51.01	Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1	[more]

BLAST of CmoCh04G026640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLE8	3.8e-114	100.00	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE...	[more]
A0A6J1JMZ9	1.6e-112	99.06	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4...	[more]
A0A1S3C3K9	1.8e-103	90.65	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
A0A0A0LN27	1.5e-102	90.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]
A0A6J1BW00	4.9e-101	88.21	ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 P...	[more]

BLAST of CmoCh04G026640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952871.1	7.9e-114	100.00	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]
XP_022990456.1	3.3e-112	99.06	ras-related protein RABC2a-like [Cucurbita maxima]	[more]
XP_038885704.1	1.4e-107	95.28	ras-related protein RABC2a-like [Benincasa hispida]	[more]
XP_008456546.1	3.7e-103	90.65	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
XP_004150373.1	3.1e-102	90.19	ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Cs...	[more]

BLAST of CmoCh04G026640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03530.1	2.2e-82	72.04	RAB GTPase homolog C2A	[more]
AT3G09910.1	2.8e-77	70.62	RAB GTPase homolog C2B	[more]
AT3G09910.2	2.8e-77	70.62	RAB GTPase homolog C2B	[more]
AT3G09910.3	2.8e-77	70.62	RAB GTPase homolog C2B	[more]
AT1G43890.1	4.7e-72	63.98	RAB GTPASE HOMOLOG B18	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 57..79 score: 50.93 coord: 156..178 score: 36.75 coord: 17..38 score: 47.48 coord: 39..55 score: 35.1 coord: 121..134 score: 42.19
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 14..181 e-value: 6.3E-28 score: 108.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 22..211 e-value: 2.3E-4 score: 13.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 17..181 e-value: 1.8E-90 score: 316.5
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 3..212
None	No IPR available	PANTHER	PTHR24073:SF643	SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 3..212
None	No IPR available	PROSITE	PS51419	RAB	coord: 12..212 score: 31.44499
None	No IPR available	PROSITE	PS51420	RHO	coord: 10..179 score: 10.143044
None	No IPR available	CDD	cd01863	Rab18	coord: 17..178 e-value: 9.50181E-91 score: 261.477
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 19..181 e-value: 4.4E-12 score: 35.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 18..179 e-value: 2.1E-54 score: 183.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 9..213 score: 15.085329
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..209 e-value: 2.5E-62 score: 211.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 12..190
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..174 e-value: 3.5E-28 score: 96.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G026640.1	CmoCh04G026640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding