CmoCh04G025730 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATTGTTAGCAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCACTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGGTATGAAAACTTTAATTTTTTGAAATCCCATTTTTAGAAGAATCATAATTTATGAAGCTTGTGAAATATTGCATGTTCGTGTTCCATGCTTTCTTTTTGAACAATGTTCGTCACATCATTCTTTTTGAACAATGGAAAATTTTAAGTTTTCATAGTGACACTAATATGCTGCAACCTTGCCCTCTGTAAAGCCTAATTCACACATGACCCCATCGTCTCCACCCGTAGGAACTACGAGATCACCTCATAAACGCCTTCGATATCCAGGGGTCGTGGAACGACCATAGAACCCTGTTCAATAAATAGAACGCATTAGATTGCAGTTATTTTTTAGAAATAGTTCTTCTTCGTGCAGATCATATTCTCATGTTTTAAAAACAACTTAAAACACCCTTCTAGCTTGAAAATATACAAATCATACTGTTTTGTCTATTGACCTTAGATCGAATTCATACTACAGATGAAATTCTTGGCGTAGTATAACCAAAAACCTAACCCTATTTCTCAGAATTTGCTGATTGTATCCCATCTAAGTTTGTATTTCTGATCAGTTTGAATCTTAATCCCGAATGCAGTGAAATAAATGTATCGGACGATGAAAATGATTTTGGAAAAAGGAGGTGTTTATGCAGTATCATGTAATTCAAACCCCATTTTTACCATTGATGATGTGTGCTCTAGATCCTCAAAAATCTGCCGACTCGAATCAGATCAACTTGTTCGCTCAAGATTTTTTTTCATGATAGAGGAAGCTTTGTCAGCAATTTTAGACAAAAACAGAAACCAACCAGGAATTCTGCTGGTTCCCATGTTCTTCGCGATGATCACCTATCCACGGTAGTGCTGGTTTCAGTAAGTTTCTTTTTTCGCATGGATGGATGAGTTTCACTTTTCAGCACTTTTTGTTGCTTTTTCACTGTATTTTCCATATTTCTTCGTTACTATTTACTCTATGAACAATTTTTTGGGGATATTTACTGTTGGGTATTCAAAAGGAAGCTTTTGATTAGGCTTTGATTGGTTGAGATTAGGATGATATTAAGATGAACTCTGTTTTGTTGATTCAATGCTCTGTTTGTGGAAATGTTTTTGGGGTTAAAAATGGAAGAGTGGGCAGCCGAAGTCTTGTTCATTTCAGCTTGAAATTAT ATGTTATTGTTAGCAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCACTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTGAAATAAATGTATCGGACGATGAAAATGATTTTGGAAAAAGGAGATCCTCAAAAATCTGCCGACTCGAATCAGATCAACTTGTTCGCTCAAGATTTTTTTTCATGATAGAGGAAGCTTTGTCAGCAATTTTAGACAAAAACAGAAACCAACCAGGAATTCTGCTGGTTCCCATGTTCTTCGCGATGATCACCTATCCACGGTAGTGCTGGTTTCAGTAAGTTTCTTTTTTCGCATGGATGGATGAGTTTCACTTTTCAGCACTTTTTGTTGCTTTTTCACTGTATTTTCCATATTTCTTCGTTACTATTTACTCTATGAACAATTTTTTGGGGATATTTACTGTTGGGTATTCAAAAGGAAGCTTTTGATTAGGCTTTGATTGGTTGAGATTAGGATGATATTAAGATGAACTCTGTTTTGTTGATTCAATGCTCTGTTTGTGGAAATGTTTTTGGGGTTAAAAATGGAAGAGTGGGCAGCCGAAGTCTTGTTCATTTCAGCTTGAAATTAT ATGTTATTGTTAGCAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCACTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTGAAATAAATGTATCGGACGATGAAAATGATTTTGGAAAAAGGAGATCCTCAAAAATCTGCCGACTCGAATCAGATCAACTTGTTCGCTCAAGATTTTTTTTCATGATAGAGGAAGCTTTGTCAGCAATTTTAGACAAAAACAGAAACCAACCAGGAATTCTGCTGGTTCCCATGTTCTTCGCGATGATCACCTATCCACGGTAG MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLNELASTKTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSDNGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRSSKICRLESDQLVRSRFFFMIEEALSAILDKNRNQPGILLVPMFFAMITYPR Homology
BLAST of CmoCh04G025730 vs. ExPASy TrEMBL
Match: A0A6J1GMI6 (uncharacterized protein LOC111455621 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455621 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 6.0e-109 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CmoCh04G025730 vs. ExPASy TrEMBL
Match: A0A6J1GNU0 (uncharacterized protein LOC111455621 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455621 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.6e-98 Identity = 196/209 (93.78%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of CmoCh04G025730 vs. ExPASy TrEMBL
Match: A0A6J1JS42 (uncharacterized protein LOC111487315 OS=Cucurbita maxima OX=3661 GN=LOC111487315 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 7.1e-94 Identity = 190/209 (90.91%), Postives = 191/209 (91.39%), Query Frame = 0
BLAST of CmoCh04G025730 vs. ExPASy TrEMBL
Match: A0A6J1BV87 (uncharacterized protein LOC111006056 OS=Momordica charantia OX=3673 GN=LOC111006056 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 8.7e-76 Identity = 164/211 (77.73%), Postives = 172/211 (81.52%), Query Frame = 0
BLAST of CmoCh04G025730 vs. ExPASy TrEMBL
Match: A0A0A0K9H6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055390 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.5e-75 Identity = 159/211 (75.36%), Postives = 173/211 (81.99%), Query Frame = 0
BLAST of CmoCh04G025730 vs. NCBI nr
Match: XP_022953125.1 (uncharacterized protein LOC111455621 isoform X1 [Cucurbita moschata] >XP_022953133.1 uncharacterized protein LOC111455621 isoform X1 [Cucurbita moschata]) HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CmoCh04G025730 vs. NCBI nr
Match: XP_023535450.1 (uncharacterized protein LOC111796883 [Cucurbita pepo subsp. pepo] >XP_023535457.1 uncharacterized protein LOC111796883 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 393.3 bits (1009), Expect = 1.7e-105 Identity = 204/209 (97.61%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of CmoCh04G025730 vs. NCBI nr
Match: KAG7032877.1 (hypothetical protein SDJN02_06927, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 392.5 bits (1007), Expect = 2.8e-105 Identity = 207/217 (95.39%), Postives = 207/217 (95.39%), Query Frame = 0
BLAST of CmoCh04G025730 vs. NCBI nr
Match: XP_022953140.1 (uncharacterized protein LOC111455621 isoform X2 [Cucurbita moschata]) HSP 1 Score: 369.0 bits (946), Expect = 3.4e-98 Identity = 196/209 (93.78%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of CmoCh04G025730 vs. NCBI nr
Match: XP_022990463.1 (uncharacterized protein LOC111487315 [Cucurbita maxima] >XP_022990464.1 uncharacterized protein LOC111487315 [Cucurbita maxima]) HSP 1 Score: 353.6 bits (906), Expect = 1.5e-93 Identity = 190/209 (90.91%), Postives = 191/209 (91.39%), Query Frame = 0
BLAST of CmoCh04G025730 vs. TAIR 10
Match: AT1G22790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 115.5 bits (288), Expect = 6.2e-26 Identity = 89/224 (39.73%), Postives = 128/224 (57.14%), Query Frame = 0
BLAST of CmoCh04G025730 vs. TAIR 10
Match: AT1G22790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 115.5 bits (288), Expect = 6.2e-26 Identity = 89/224 (39.73%), Postives = 128/224 (57.14%), Query Frame = 0
BLAST of CmoCh04G025730 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 109.4 bits (272), Expect = 4.5e-24 Identity = 83/216 (38.43%), Postives = 110/216 (50.93%), Query Frame = 0
BLAST of CmoCh04G025730 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 2.7e-05 Identity = 29/70 (41.43%), Postives = 39/70 (55.71%), Query Frame = 0
BLAST of CmoCh04G025730 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04 Identity = 21/44 (47.73%), Postives = 31/44 (70.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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