Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATGTTGCATTAGCAAATGCAAACCCAAGACCATCAAACGACAACCTCGTTTTGATCTCAACAACCTTGTCCGACACAAGCTCGCTGTCATTCCTCAACCGCCTCCATTAACATCAGCAGCACCTCCTCCTCTCTCTCTTAATAACAAAATCTCTCCTTATCCTCCTTCCCCTTCTTCCATCTCTTCTTCAACTACAACAATCCCCTCTTTCTCACCTTCAACTTCACGTTCCCTAATTTTCTCCGATGACTACTTGGGGTCGTCTTATAAGCATAACTCTCCCCTCCTTCGCGTCAATTCCCTTAAACCTAACCCCTTTTCGTCGCCCATGAAGCCCGTTTCCCCGGTGATCCGCCATTTTCCACAGCAACCGTCTCCCCAAAGGATGTCGAGATCAAAAACCCTAAAGAGAGCCCGGCCTTCACCTCCGTCGCCGGTTCGGCAAAAGAGCTTGAGGAAGGAGGAAGACCTCCTTCGCCGTCGCCAAGTAGGCGGTCGAACGGAGAGAAATGCCGAGTGGCTCTGA
mRNA sequence
ATGGGATGTTGCATTAGCAAATGCAAACCCAAGACCATCAAACGACAACCTCGTTTTGATCTCAACAACCTTGTCCGACACAAGCTCGCTGTCATTCCTCAACCGCCTCCATTAACATCAGCAGCACCTCCTCCTCTCTCTCTTAATAACAAAATCTCTCCTTATCCTCCTTCCCCTTCTTCCATCTCTTCTTCAACTACAACAATCCCCTCTTTCTCACCTTCAACTTCACGTTCCCTAATTTTCTCCGATGACTACTTGGGGTCGTCTTATAAGCATAACTCTCCCCTCCTTCGCGTCAATTCCCTTAAACCTAACCCCTTTTCGTCGCCCATGAAGCCCGTTTCCCCGGTGATCCGCCATTTTCCACAGCAACCGTCTCCCCAAAGGATGTCGAGATCAAAAACCCTAAAGAGAGCCCGGCCTTCACCTCCGTCGCCGGTTCGGCAAAAGAGCTTGAGGAAGGAGGAAGACCTCCTTCGCCGTCGCCAAGTAGGCGGTCGAACGGAGAGAAATGCCGAGTGGCTCTGA
Coding sequence (CDS)
ATGGGATGTTGCATTAGCAAATGCAAACCCAAGACCATCAAACGACAACCTCGTTTTGATCTCAACAACCTTGTCCGACACAAGCTCGCTGTCATTCCTCAACCGCCTCCATTAACATCAGCAGCACCTCCTCCTCTCTCTCTTAATAACAAAATCTCTCCTTATCCTCCTTCCCCTTCTTCCATCTCTTCTTCAACTACAACAATCCCCTCTTTCTCACCTTCAACTTCACGTTCCCTAATTTTCTCCGATGACTACTTGGGGTCGTCTTATAAGCATAACTCTCCCCTCCTTCGCGTCAATTCCCTTAAACCTAACCCCTTTTCGTCGCCCATGAAGCCCGTTTCCCCGGTGATCCGCCATTTTCCACAGCAACCGTCTCCCCAAAGGATGTCGAGATCAAAAACCCTAAAGAGAGCCCGGCCTTCACCTCCGTCGCCGGTTCGGCAAAAGAGCTTGAGGAAGGAGGAAGACCTCCTTCGCCGTCGCCAAGTAGGCGGTCGAACGGAGAGAAATGCCGAGTGGCTCTGA
Protein sequence
MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPSSISSSTTTIPSFSPSTSRSLIFSDDYLGSSYKHNSPLLRVNSLKPNPFSSPMKPVSPVIRHFPQQPSPQRMSRSKTLKRARPSPPSPVRQKSLRKEEDLLRRRQVGGRTERNAEWL
Homology
BLAST of CmoCh04G025160 vs. ExPASy TrEMBL
Match:
A0A6J1FG04 (uncharacterized protein LOC111445147 OS=Cucurbita moschata OX=3662 GN=LOC111445147 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 98/179 (54.75%), Postives = 113/179 (63.13%), Query Frame = 0
Query: 1 MGCCISKCKPKTIK--RQPRFDLNNLVRHKLAVIPQPPPL------TSAAPPPLSLNNKI 60
MG CISKCKPK IK P FD NN+V+ KL VIPQPPPL SA+ P LSL+NKI
Sbjct: 1 MGSCISKCKPKAIKPPPPPLFDFNNIVQDKLVVIPQPPPLAVAVTAASASAPSLSLSNKI 60
Query: 61 SPYPPSPSSISSS---------TTTIPSFSPSTSRSLIFSDDYLGSSYKHNSPLLRVNSL 120
SPYPPSPS SSS TTT SFS ++SRS I DY S Y N ++R+NSL
Sbjct: 61 SPYPPSPSPSSSSTCLSSSTTTTTTNSSFSTASSRSPILPHDYFWSPYNQNPHVVRINSL 120
Query: 121 KPNPFSSPMKPVSPVIRHFPQQPSPQRMSRSKTL------KRARPSPPSPVRQKSLRKE 157
K + FS P VSPV+R + PSPQR+SRS + KR R + PSPVRQKS RKE
Sbjct: 121 KASTFSPPFNLVSPVVRQRIRHPSPQRVSRSTSTSTSTPQKRVRQASPSPVRQKSFRKE 179
BLAST of CmoCh04G025160 vs. ExPASy TrEMBL
Match:
A0A5D3D583 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00060 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 4.9e-30
Identity = 95/178 (53.37%), Postives = 112/178 (62.92%), Query Frame = 0
Query: 1 MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQP--PPLTS------AAPPPLSLNNKI 60
MG CISKCKPK +++ P FD NNLV+ KL VIPQP P LTS +A P LSL+NKI
Sbjct: 1 MGSCISKCKPKMMRQPPLFDFNNLVQDKLVVIPQPLSPLLTSTATKTTSATPSLSLHNKI 60
Query: 61 SPYPPSPSSISSSTTTIPSFSPSTSRSL-------------IFSDDYLGSSYKHNSPLLR 120
SPYPPSPS SSS ++ S +TS S I S Y S Y N L R
Sbjct: 61 SPYPPSPSPSSSSISSFTCLSSNTSSSTNTSFSTASSSPSPISSHHYFPSPYNQNPHLFR 120
Query: 121 VNSLKPNPFSSPMKPVSP-VIRHFPQQPSPQRMSRSKTLKRARPSPPSPVRQKSLRKE 157
+NSLK + F SP+KP+SP V+RH PSPQR+SRS KR RP+ PSP+RQKS RKE
Sbjct: 121 INSLKAHAFRSPVKPISPLVVRH----PSPQRVSRSTPQKRLRPASPSPIRQKSFRKE 174
BLAST of CmoCh04G025160 vs. ExPASy TrEMBL
Match:
A0A1S3B4I5 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103485682 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 4.9e-30
Identity = 95/178 (53.37%), Postives = 112/178 (62.92%), Query Frame = 0
Query: 1 MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQP--PPLTS------AAPPPLSLNNKI 60
MG CISKCKPK +++ P FD NNLV+ KL VIPQP P LTS +A P LSL+NKI
Sbjct: 1 MGSCISKCKPKMMRQPPLFDFNNLVQDKLVVIPQPLSPLLTSTATKTTSATPSLSLHNKI 60
Query: 61 SPYPPSPSSISSSTTTIPSFSPSTSRSL-------------IFSDDYLGSSYKHNSPLLR 120
SPYPPSPS SSS ++ S +TS S I S Y S Y N L R
Sbjct: 61 SPYPPSPSPSSSSISSFTCLSSNTSSSTNTSFSTASSSPSPISSHHYFPSPYNQNPHLFR 120
Query: 121 VNSLKPNPFSSPMKPVSP-VIRHFPQQPSPQRMSRSKTLKRARPSPPSPVRQKSLRKE 157
+NSLK + F SP+KP+SP V+RH PSPQR+SRS KR RP+ PSP+RQKS RKE
Sbjct: 121 INSLKAHAFRSPVKPISPLVVRH----PSPQRVSRSTPQKRLRPASPSPIRQKSFRKE 174
BLAST of CmoCh04G025160 vs. ExPASy TrEMBL
Match:
A0A0A0KIF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G354870 PE=4 SV=1)
HSP 1 Score: 131.0 bits (328), Expect = 5.0e-27
Identity = 95/176 (53.98%), Postives = 113/176 (64.20%), Query Frame = 0
Query: 1 MGCCISKCKPKTIKRQPRFDLNNL-VRHKLAVIPQP-PPL----TSAAPPPLSLNNKISP 60
MG CISKCKPK +K+ P FD NNL V+ KL VIPQP PL T++A P LSL+NKISP
Sbjct: 1 MGSCISKCKPKMMKQPPLFDFNNLVVQDKLVVIPQPLSPLLTTKTTSATPSLSLHNKISP 60
Query: 61 YPPSPSSISSS------------TTTIPSFS-PSTSRSLIFSDDYLGSSYKHNSPLLRVN 120
YPPSPS SSS ++T SFS S+S S I S Y S Y N L +N
Sbjct: 61 YPPSPSPSSSSISSFTCLSSNTPSSTNTSFSTASSSPSPISSHHYFPSPYNQNPHLFPIN 120
Query: 121 SLKPNPFSSPMKPVSP-VIRHFPQQPSPQRMSRSKTLKRARPSPPSPVRQKSLRKE 157
SLK + F P+KP+SP ++RH PSPQR+SRS KR RP+ PSP+RQKS RKE
Sbjct: 121 SLKAHAFRPPVKPISPLLLRH----PSPQRVSRSIPQKRPRPASPSPIRQKSFRKE 172
BLAST of CmoCh04G025160 vs. ExPASy TrEMBL
Match:
M5XHQ0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G442100 PE=4 SV=1)
HSP 1 Score: 74.7 bits (182), Expect = 4.3e-10
Identity = 75/184 (40.76%), Postives = 97/184 (52.72%), Query Frame = 0
Query: 1 MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSP- 60
MG CISKC+P R+ D N V+ KL + P L A PP+S +NKISP PPSP
Sbjct: 1 MGSCISKCRP----RRHMIDELNHVQDKLVISQAPSRL---AAPPISASNKISPSPPSPS 60
Query: 61 ---SSISSSTTTIPSFSPSTSRSLI-----------------FSDDYLGSSYKHNSPLLR 120
SS SS T T + + TS SL FS+++L S YK N ++R
Sbjct: 61 NSTSSASSFTCTTNTSTSHTSSSLTSTLSSASSVLSSKIDRSFSNEFLWSCYKENPHVVR 120
Query: 121 VNSLKPNPFSS---PMKPVSPVIRHFPQQPSPQRMSRSKT-LKRARPSPPSPV-RQKSLR 159
+NSLK FSS P KP+ P +QP+ + + S T KR R S P+P+ RQKS R
Sbjct: 121 INSLKEASFSSSSLPQKPLLPAAVK-KKQPNLKNANASVTPQKRVRSSSPTPLTRQKSFR 176
BLAST of CmoCh04G025160 vs. NCBI nr
Match:
KAG6602274.1 (Wall-associated receptor kinase 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 170/176 (96.59%), Postives = 173/176 (98.30%), Query Frame = 0
Query: 1 MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS 60
MGCCISKCKPKTIKRQPRFDLNNLV+HKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS
Sbjct: 348 MGCCISKCKPKTIKRQPRFDLNNLVQHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS 407
Query: 61 SISSSTTTIPSFSPSTSRSLIFSDDYLGSSYKHNSPLLRVNSLKPNPFSSPMKPVSPVIR 120
SISSSTTTI SFSPSTSRSLIFS DYLGSSYKHN+PLLRVNSLKPNPFSSPMKPVSPVIR
Sbjct: 408 SISSSTTTITSFSPSTSRSLIFSADYLGSSYKHNAPLLRVNSLKPNPFSSPMKPVSPVIR 467
Query: 121 HFPQQPSPQRMSRSKTLKRARPSPPSPVRQKSLRKEEDLLRRRQVGGRTERNAEWL 177
HFPQQPSPQR+SRS TLKRARPSPPSPVRQKSLRKEEDLLRRRQVGGRTERNAEWL
Sbjct: 468 HFPQQPSPQRVSRSTTLKRARPSPPSPVRQKSLRKEEDLLRRRQVGGRTERNAEWL 523
BLAST of CmoCh04G025160 vs. NCBI nr
Match:
KAG6602133.1 (hypothetical protein SDJN03_07366, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 321.6 bits (823), Expect = 4.1e-84
Identity = 168/176 (95.45%), Postives = 171/176 (97.16%), Query Frame = 0
Query: 1 MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS 60
MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS
Sbjct: 1 MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS 60
Query: 61 SISSSTTTIPSFSPSTSRSLIFSDDYLGSSYKHNSPLLRVNSLKPNPFSSPMKPVSPVIR 120
SISSSTTTI SFSPSTSRSLIFSDDYLGSSYKHNSPLLRVNS KPNPFSSPMKPVSPVIR
Sbjct: 61 SISSSTTTITSFSPSTSRSLIFSDDYLGSSYKHNSPLLRVNSFKPNPFSSPMKPVSPVIR 120
Query: 121 HFPQQPSPQRMSRSKTLKRARPSPPSPVRQKSLRKEEDLLRRRQVGGRTERNAEWL 177
HFPQQPSPQR+SRS TLKRARPSPPSPVRQKSLRKEEDLLR QVGGRT+RNA+WL
Sbjct: 121 HFPQQPSPQRVSRSTTLKRARPSPPSPVRQKSLRKEEDLLRCCQVGGRTKRNAKWL 176
BLAST of CmoCh04G025160 vs. NCBI nr
Match:
KAG6602135.1 (Wall-associated receptor kinase 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 309.3 bits (791), Expect = 2.1e-80
Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0
Query: 1 MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS 60
MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS
Sbjct: 189 MGCCISKCKPKTIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPS 248
Query: 61 SISSSTTTIPSFSPSTSRSLIFSDDYLGSSYKHNSPLLRVNSLKPNPFSSPMKPVSPVIR 120
SISSSTTTI SFSPSTSRSLIFS DYLGSSYKHN+PLLRVNSLKPNPFSSPMKPVSPVIR
Sbjct: 249 SISSSTTTITSFSPSTSRSLIFSADYLGSSYKHNAPLLRVNSLKPNPFSSPMKPVSPVIR 308
Query: 121 HFPQQPSPQRMSRSKTLKRARPSPPSPVRQKSLRKEEDLLRRRQVGG 168
HFPQQPSPQR+SRS TLKRARPSPPSPVRQKSLRKEEDLLRRRQVGG
Sbjct: 309 HFPQQPSPQRVSRSTTLKRARPSPPSPVRQKSLRKEEDLLRRRQVGG 355
BLAST of CmoCh04G025160 vs. NCBI nr
Match:
KAG7032830.1 (hypothetical protein SDJN02_06880, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 296.2 bits (757), Expect = 1.9e-76
Identity = 158/165 (95.76%), Postives = 160/165 (96.97%), Query Frame = 0
Query: 12 TIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPSSISSSTTTIPS 71
TIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPSSISSSTTTI S
Sbjct: 148 TIKRQPRFDLNNLVRHKLAVIPQPPPLTSAAPPPLSLNNKISPYPPSPSSISSSTTTITS 207
Query: 72 FSPSTSRSLIFSDDYLGSSYKHNSPLLRVNSLKPNPFSSPMKPVSPVIRHFPQQPSPQRM 131
FSPSTSRSLIFSDDYLGSSYKHNSPLLRVNS KPNPFSSPMKPVSPVIRHFPQQPSPQR+
Sbjct: 208 FSPSTSRSLIFSDDYLGSSYKHNSPLLRVNSFKPNPFSSPMKPVSPVIRHFPQQPSPQRV 267
Query: 132 SRSKTLKRARPSPPSPVRQKSLRKEEDLLRRRQVGGRTERNAEWL 177
SRS TLKRARPSPPS VRQKSLRKEEDLLRR QVGGRTERNA+WL
Sbjct: 268 SRSTTLKRARPSPPSLVRQKSLRKEEDLLRRCQVGGRTERNAKWL 312
BLAST of CmoCh04G025160 vs. NCBI nr
Match:
XP_023550659.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 159.8 bits (403), Expect = 2.1e-35
Identity = 102/174 (58.62%), Postives = 115/174 (66.09%), Query Frame = 0
Query: 1 MGCCISKCKPKTIK-----RQPRFDLNNLVRHKLAVIPQPPPL----TSAAPPPLSLNNK 60
MG CISKCKPK IK P FD NN+V+ KL VIPQPPPL TSAA P LSL+NK
Sbjct: 1 MGSCISKCKPKAIKPPPPPPPPLFDFNNIVQDKLVVIPQPPPLAVAVTSAAAPSLSLSNK 60
Query: 61 ISPYPPSPSSISSS---------TTTIPSFSPSTSRSLIFSDDYLGSSYKHNSPLLRVNS 120
ISPYPPSPS SSS TTT SFS ++SRS I S DY S Y N ++R+NS
Sbjct: 61 ISPYPPSPSPSSSSTCLSSTTTTTTTNSSFSTASSRSPILSHDYFWSPYNQNPHVVRINS 120
Query: 121 LKPNPFSSPMKPVSPVIRHFPQQPSPQRMSRSKTLKRARPSPPSPVRQKSLRKE 157
LK + FS P PVSPV+R + PSPQR+SRS KR R + PSPVRQKS RKE
Sbjct: 121 LKASAFSPPFNPVSPVVRQRIRHPSPQRVSRSTPQKRVRQASPSPVRQKSFRKE 174
BLAST of CmoCh04G025160 vs. TAIR 10
Match:
AT1G21510.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; Has 380 Blast hits to 286 proteins in 63 species: Archae - 0; Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13; Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink). )
HSP 1 Score: 41.6 bits (96), Expect = 7.7e-04
Identity = 58/204 (28.43%), Postives = 92/204 (45.10%), Query Frame = 0
Query: 1 MGCCISKCKPKT---------------------IKRQPR--FDLNNLVRHKLAVIPQPPP 60
MGCCISKC PK+ + R P LN +++ IP P
Sbjct: 1 MGCCISKCSPKSKDFKEAEEPHEKYCSVPEKMFMSRCPSRVSPLNLPEKNRFHPIPVPNK 60
Query: 61 LTS----AAPPP----LSLNNKISPYPPSPSSISSSTTTIPSFSP-STSRSLIFSDDYLG 120
+ PPP L+ + I P S SS+SSS +++ + S S S+ FS+D+L
Sbjct: 61 FINIPGKVIPPPSPVKLASFSPIQPSTTSNSSLSSSNSSLSTASSVSVSKERSFSNDFLR 120
Query: 121 SSYKHNSPLLRVNSLK-------------PNPFSSPMKPV-SPVIRHFPQQPSPQRMSRS 159
+ Y+ NS + R+NSL+ P+ F SP+ P + + + S + + S
Sbjct: 121 ACYQENSHVARINSLREASLSMKTTKPRYPSRFDSPVIPSRNSTTPNRANEDSKRGSNCS 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FG04 | 1.5e-31 | 54.75 | uncharacterized protein LOC111445147 OS=Cucurbita moschata OX=3662 GN=LOC1114451... | [more] |
A0A5D3D583 | 4.9e-30 | 53.37 | TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00060 ... | [more] |
A0A1S3B4I5 | 4.9e-30 | 53.37 | Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103485682 PE=4 SV=1 | [more] |
A0A0A0KIF4 | 5.0e-27 | 53.98 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G354870 PE=4 SV=1 | [more] |
M5XHQ0 | 4.3e-10 | 40.76 | Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G442100 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6602274.1 | 1.3e-85 | 96.59 | Wall-associated receptor kinase 2, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6602133.1 | 4.1e-84 | 95.45 | hypothetical protein SDJN03_07366, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6602135.1 | 2.1e-80 | 97.01 | Wall-associated receptor kinase 2, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7032830.1 | 1.9e-76 | 95.76 | hypothetical protein SDJN02_06880, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023550659.1 | 2.1e-35 | 58.62 | proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT1G21510.1 | 7.7e-04 | 28.43 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |