CmoCh04G024860 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh04G024860
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	40S ribosomal protein S8
Location	Cmo_Chr04: 18324396 .. 18326659 (-)
RNA-Seq Expression	CmoCh04G024860
Synteny	CmoCh04G024860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCACTCCTAGTGCCTTCTGCGGAGCGTCCATACTTGTCTCCGCCGTCCGCCGTCCGCCGATCGGCTGCTGCCGTCCCAGTGAGTATTTTCCCTCATCTTCTGTACTTAATGCACATCTCTGTCTCGTTGATGCTTGTCTCTTTCGCATTCTCTTTCTATGTTTCACGTTTGCCTTTGAAAGTTTAGGTTTAGGGTTTGAGCGGTTTCTGTCATTTTTTGTGATAGGTTGGATCAGGAACCTTAGAACTTCTCTTTGCGGAGGAGCTCTCGATTCGTCAAGATGGGTAAGTCATATGCGGACTTTTAGATTGTTTTACACATCTCCATTTGTGTGCTTGTTTTTCTTCTTTGTAATCTGGGAGAGTTTTGTGTACAGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTAACTTGCTCTGCTTGTATTTAGTTGTGTGCAATTAGATTAATCAGTTTTTACTCCATTTCCCCAAATTAGTTGCTGATCGGCATTCAAAAGATTTCATGTCTTTCTACATTTAATTTCAAAAAATTTCATGTCTTTCTACATTTAATTTTTTGGTTTTCAGTATACAATGCTAGCTTTGTGATCTTAGCTGTAACAATGCCTTTTTAATTGGATGTTAGTGACATTATTATCAAGGGTTTGCCGTTTGTTTCCTCTTGCAGTGTATATTTAAAGAACTTTAGTTAATCTGCGTTAGATACGTCATCTCCTCTGATAGATTAACGTTTTTTTTTTTACTAAAAATGTTATGACTAGCTATAATATGCTTCACATTTGATGCTTGGATGAACGGAAAATTGTAATTTCCCTTGCTGACATAGCAATTTAGTCTTTTCCAGTAATTTTTTTAAGGTGCAGCTCAAGTTTACTAATTTTTCATGTGGAAGTAGAAATATAACATTCTTTACCTGTGTTTTTGAGGTTTTGATTACTTTCTAGTAAATGGAGGATACAATTTTCATGTGCTGTGTGTCATTTTTCATGTTCTCACACGATATCATTTCTTTGTATAGGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGATATCCAGTGACAAGTCAATCCGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAATTACTCATGGGGTAGTGAGGCCGTGACTAGGAAGACCCGTATTCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAATGGTATCTTCAACACTATGGTGTGGATATTGGAAGGAAGAAGAAGACCTCAGCACCTGCCAAGAAGGAAGAGGTAGAGCAAGCTTGGTCTAAGTTCGATTGTTTGATTTTGTTTATAGAAATTTCAAATATGAGTTTTGATGTGTTTAAAATAAGTTCGATGGACAATGTTAATGGCATTCTAGCATGATCCATAAGAGAGCTTTTTTTAATGGTTGATAGGAAGGTGAGGCTGCTGCTGCTGCGGAGGAGTTGAAGAAGAGTAACCACGTTCAGCGCAAGTTGGAGAAACGTCAACAGGATCGTAAGCTCGACCCACATATCGAGGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGGTAAGCACGATCATTGAAGGATTTTTGTTCTTTTGAACTCGTCTTGGCAGACGTTGGCTGATGTTTTACGAATTTTTTGCAGGTATATCTTGGAGGGGAAAGAACTCGAGTTCTACATGAAGAAGCTCCAGAGGAAGAAGGGGAAAGGTGCTGGTGCTGCATAAGTTTTGTCGTTGAGATATGTTGTGGCCGTGTTTCATTTTCTATGATTCTATCTGCCTTTTTTGTCTTATGAAGACGATGATTTGCAGCCAAGAGGATAGAATTATTTATGAACTTCAATTTTGCTGGTATTAGTTGTTTAATTACAATACTTTATTTGAGTCTGTTTCGTGATTATAACAGTTCGTTTATTAGCCTCAGAATTTTCAAATGCCCCAACCTATTTCTTTGCCTACTGATTTAATTTGGTCTAGTTGAGTTAAATCTTGTTCTTTTTTGGCTTGCATTCTGATTATTTCTTTCCTTAGAATAATCTAGCCATCAATTATTTCTTCCTGGTTAATAATATAATAATTTAGCCTATATTATTATTACAAACATT

mRNA sequence

CTCACTCCTAGTGCCTTCTGCGGAGCGTCCATACTTGTCTCCGCCGTCCGCCGTCCGCCGATCGGCTGCTGCCGTCCCAGTTGGATCAGGAACCTTAGAACTTCTCTTTGCGGAGGAGCTCTCGATTCGTCAAGATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGATATCCAGTGACAAGTCAATCCGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAATTACTCATGGGGTAGTGAGGCCGTGACTAGGAAGACCCGTATTCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAATGGTATCTTCAACACTATGGTGTGGATATTGGAAGGAAGAAGAAGACCTCAGCACCTGCCAAGAAGGAAGAGGAAGGTGAGGCTGCTGCTGCTGCGGAGGAGTTGAAGAAGAGTAACCACGTTCAGCGCAAGTTGGAGAAACGTCAACAGGATCGTAAGCTCGACCCACATATCGAGGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGGTATATCTTGGAGGGGAAAGAACTCGAGTTCTACATGAAGAAGCTCCAGAGGAAGAAGGGGAAAGGTGCTGGTGCTGCATAAGTTTTGTCGTTGAGATATGTTGTGGCCGTGTTTCATTTTCTATGATTCTATCTGCCTTTTTTGTCTTATGAAGACGATGATTTGCAGCCAAGAGGATAGAATTATTTATGAACTTCAATTTTGCTGGTATTAGTTGTTTAATTACAATACTTTATTTGAGTCTGTTTCGTGATTATAACAGTTCGTTTATTAGCCTCAGAATTTTCAAATGCCCCAACCTATTTCTTTGCCTACTGATTTAATTTGGTCTAGTTGAGTTAAATCTTGTTCTTTTTTGGCTTGCATTCTGATTATTTCTTTCCTTAGAATAATCTAGCCATCAATTATTTCTTCCTGGTTAATAATATAATAATTTAGCCTATATTATTATTACAAACATT

Coding sequence (CDS)

ATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACTAAGATATCCAGTGACAAGTCAATCCGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAATTACTCATGGGGTAGTGAGGCCGTGACTAGGAAGACCCGTATTCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAATGGTATCTTCAACACTATGGTGTGGATATTGGAAGGAAGAAGAAGACCTCAGCACCTGCCAAGAAGGAAGAGGAAGGTGAGGCTGCTGCTGCTGCGGAGGAGTTGAAGAAGAGTAACCACGTTCAGCGCAAGTTGGAGAAACGTCAACAGGATCGTAAGCTCGACCCACATATCGAGGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGGTATATCTTGGAGGGGAAAGAACTCGAGTTCTACATGAAGAAGCTCCAGAGGAAGAAGGGGAAAGGTGCTGGTGCTGCATAA

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA

Homology

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BLAST of CmoCh04G024860 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 376.7 bits (966), Expect = 1.8e-103
Identity = 194/221 (87.78%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEG-EAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT A  K   EG E  AAAEE KKSNHV RKLEKR++ R LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 221
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

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BLAST of CmoCh04G024860 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 375.6 bits (963), Expect = 4.0e-103
Identity = 192/220 (87.27%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK  A  K  E  +A A  EE KKSNHV RKLEKRQQ R LD HIEEQF SGRL+
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 221
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

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BLAST of CmoCh04G024860 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 191/221 (86.43%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           +IGRKKKT+A AKK+   E  A  EE KKSNHV  KLEKRQQ R LD HIEEQF  G+L+
Sbjct: 121 EIGRKKKTAA-AKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

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BLAST of CmoCh04G024860 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.0e-98
Identity = 180/221 (81.45%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTSAPAKKE-EEGE--AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+++  KK+ EEGE  A AA EE+KKSNH+ RK+  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 219
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of CmoCh04G024860 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.3e-97
Identity = 185/221 (83.71%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK          GE A   EE+KKSNHVQRKLE RQ+ R LD H+EEQFSSGRL+
Sbjct: 121 DIGRKKK----------GE-AVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 ACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of CmoCh04G024860 vs. ExPASy TrEMBL
Match: A0A6J1JQW0 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111487026 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.9e-117
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of CmoCh04G024860 vs. ExPASy TrEMBL
Match: A0A6J1GZK4 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111459010 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 2.9e-117
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of CmoCh04G024860 vs. ExPASy TrEMBL
Match: A0A6J1K1I2 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.0e-114
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKT+A AKKEEEG+AAAA EE KKSNHVQRKLEKRQQ+RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of CmoCh04G024860 vs. ExPASy TrEMBL
Match: A0A6J1FIB1 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.0e-114
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKT+A AKKEEEG+AAAA EE KKSNHVQRKLEKRQQ+RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of CmoCh04G024860 vs. ExPASy TrEMBL
Match: A0A0A0KFT0 (40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_6G382970 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 211/222 (95.05%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGE-AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT+A AKK+EEG+ AAAAAEE+KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]

BLAST of CmoCh04G024860 vs. NCBI nr
Match: XP_022957602.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022989999.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023515358.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo] >KAG6602108.1 40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032811.1 40S ribosomal protein S8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 431.0 bits (1107), Expect = 6.1e-117
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of CmoCh04G024860 vs. NCBI nr
Match: XP_022939829.1 (40S ribosomal protein S8 [Cucurbita moschata] >XP_022993929.1 40S ribosomal protein S8 [Cucurbita maxima])

HSP 1 Score: 420.6 bits (1080), Expect = 8.2e-114
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKT+A AKKEEEG+AAAA EE KKSNHVQRKLEKRQQ+RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of CmoCh04G024860 vs. NCBI nr
Match: KAG6578955.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113
Identity = 214/221 (96.83%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKT+A AKKEE+G+AAAA EE+KKSNHVQRKLEKRQQ+RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEDGDAAAATEEVKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of CmoCh04G024860 vs. NCBI nr
Match: XP_023550698.1 (40S ribosomal protein S8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 216/224 (96.43%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAA---EELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 180
           DIGRKKKT+A AKKEEEG+AAAAA   EE KKSNHVQRKLEKRQQ+RKLDPHIEEQFSSG
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 224

[Close]

BLAST of CmoCh04G024860 vs. NCBI nr
Match: XP_004149800.1 (40S ribosomal protein S8 [Cucumis sativus] >KGN47709.1 hypothetical protein Csa_018323 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 211/222 (95.05%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGE-AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT+A AKK+EEG+ AAAAAEE+KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]

BLAST of CmoCh04G024860 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 358.6 bits (919), Expect = 3.6e-99
Identity = 180/221 (81.45%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTSAPAKKE-EEGE--AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+++  KK+ EEGE  A AA EE+KKSNH+ RK+  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 219
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of CmoCh04G024860 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 355.9 bits (912), Expect = 2.3e-98
Identity = 185/221 (83.71%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK          GE A   EE+KKSNHVQRKLE RQ+ R LD H+EEQFSSGRL+
Sbjct: 121 DIGRKKK----------GE-AVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 ACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

The following BLAST results are available for this feature:

BLAST of CmoCh04G024860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08069	1.8e-103	87.78	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
P49199	4.0e-103	87.27	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
O81361	1.3e-101	86.43	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q93VG5	5.0e-98	81.45	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]
Q9FIF3	3.3e-97	83.71	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]

BLAST of CmoCh04G024860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQW0	2.9e-117	100.00	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111487026 PE=3 SV=1	[more]
A0A6J1GZK4	2.9e-117	100.00	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111459010 PE=3 SV=1	[more]
A0A6J1K1I2	4.0e-114	97.29	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1	[more]
A0A6J1FIB1	4.0e-114	97.29	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1	[more]
A0A0A0KFT0	1.4e-111	95.05	40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_6G382970 PE=3 SV=1	[more]

BLAST of CmoCh04G024860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957602.1	6.1e-117	100.00	40S ribosomal protein S8-like [Cucurbita moschata] >XP_022989999.1 40S ribosomal...	[more]
XP_022939829.1	8.2e-114	97.29	40S ribosomal protein S8 [Cucurbita moschata] >XP_022993929.1 40S ribosomal prot...	[more]
KAG6578955.1	1.1e-113	96.83	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023550698.1	1.2e-112	96.43	40S ribosomal protein S8 [Cucurbita pepo subsp. pepo]	[more]
XP_004149800.1	2.9e-111	95.05	40S ribosomal protein S8 [Cucumis sativus] >KGN47709.1 hypothetical protein Csa_...	[more]

BLAST of CmoCh04G024860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20290.1	3.6e-99	81.45	Ribosomal protein S8e family protein	[more]
AT5G59240.1	2.3e-98	83.71	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 1..198 e-value: 6.5E-56 score: 188.3
None	No IPR available	GENE3D	3.10.290.70		coord: 163..216 e-value: 1.4E-17 score: 66.1 coord: 32..162 e-value: 1.3E-40 score: 140.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..169
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 1..219
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 5..198 e-value: 3.78875E-58 score: 178.482
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 1..200 e-value: 4.1E-47 score: 157.4
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 1..219
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 11..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G024860.1	CmoCh04G024860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome